TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950160.2.1
(846 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV263738.1|CV263738 WS02022.B21_K12 PTxN-IB-N-A-11 Popul... 181 1e-060
gb|CV235910.1|CV235910 WS01222.B21_B08 PT-GT-FL-A-3 Populus... 171 4e-042
gb|CV242604.1|CV242604 WS02515.B21_I09 PT-MB-N-A-15 Populus... 73 1e-041
gb|CV231822.1|CV231822 WS0195.B21_K18 PT-DX-N-A-10 Populus ... 76 4e-037
gb|CF232874.1|CF232874 PtaJXO0016G8G0814 Poplar cDNA librar... 70 2e-035
gb|CV261347.1|CV261347 WS02016.B21_I14 PTxN-IB-N-A-11 Popul... 77 1e-034
gb|DT525892.1|DT525892 WS02046.C21_J03 PTxN-IB-N-A-11 Popul... 77 1e-034
gb|CN549595.1|CN549595 GQ0241.B3_D18 GQ024 Populus trichoca... 68 2e-033
gb|CA926791.1|CA926791 MTU6CR.P1.B12 Aspen root cDNA Librar... 76 2e-033
gb|CA927414.1|CA927414 MTU6CR.P8.G03 Aspen root cDNA Librar... 76 2e-033
gb|DN484940.1|DN484940 K040P50.3pR Populus apical shoot cDN... 78 3e-033
gb|DT515203.1|DT515203 WS02426.B21_O22 PTxD-ICC-N-A-14 Popu... 66 1e-032
gb|DT512063.1|DT512063 WS02418.B21_E03 PTxD-ICC-N-A-14 Popu... 66 1e-032
gb|CK097179.1|CK097179 UB42BPD03.3pR Populus active cambium... 66 1e-032
gb|CV240226.1|CV240226 WS0234.B21_M19 PT-MB-A-13 Populus tr... 66 1e-032
gb|DT507435.1|DT507435 WS02418.BR_E03 PTxD-ICC-N-A-14 Popul... 66 1e-032
gb|CV257505.1|CV257505 WS0246.B21_N16 PTxD-ICC-N-A-14 Popul... 66 1e-032
gb|DT507569.1|DT507569 WS02418.BR_J21 PTxD-ICC-N-A-14 Popul... 66 1e-032
gb|DT512195.1|DT512195 WS02418.B21_J21 PTxD-ICC-N-A-14 Popu... 66 1e-032
gb|CX660230.1|CX660230 PO01019F01 Poplar SC cDNA library Po... 66 1e-032
gb|CK318930.1|CK318930 X9P04h10 Populus stem seasonal libra... 67 3e-029
gb|CX654661.1|CX654661 PO02057G05 Poplar SC cDNA library Po... 64 3e-027
gb|CV257130.1|CV257130 WS0245.B21_M05 PTxD-ICC-N-A-14 Popul... 73 5e-027
gb|BU824298.1|BU824298 UB62BPE10 Populus tremula cambium cD... 73 5e-027
gb|CB176640.1|CB176640 PopSC00063 Poplar SC cDNA library Po... 76 2e-026
gb|CK088858.1|CK088858 A076P21.3pR Hybrid aspen plasmid lib... 73 1e-025
gb|CK091185.1|CK091185 F056P93.3pR Populus flower cDNA libr... 73 2e-025
gb|CX170763.1|CX170763 G07_69-32_13.ab1 leaf inoculated wit... 67 5e-024
gb|BI127787.1|BI127787 G066P03Y Populus cambium cDNA librar... 66 9e-024
gb|BU868361.1|BU868361 M115A04 Populus flower cDNA library ... 66 9e-024
>gb|CV263738.1|CV263738 WS02022.B21_K12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02022_K12 3', mRNA sequence
Length = 937
Score = 181 bits (390), Expect(2) = 1e-060
Identities = 69/97 (71%), Positives = 77/97 (79%)
Frame = -2 / -2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYTTVDLATIKEGAVLHYNGNMKPWLK 576
D TLWKLG+LPPGLL FYGL E LDP WHVLGLGYT VD I++GAVLH+NGN KPWLK
Sbjct: 450 DRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGLGYTNVDPHLIEKGAVLHFNGNSKPWLK 271
Query: 575 IGMEKYKSFWDNYVDYSHPLIQQCFMR*LMCINIRIF 465
IGMEKYKS W+ YVDYSHPL+QQC + * + IF
Sbjct: 270 IGMEKYKSLWEKYVDYSHPLLQQCNLH*FWTWKLHIF 160
Score = 110 bits (235), Expect(2) = 8e-032
Identities = 52/87 (59%), Positives = 57/87 (65%)
Frame = +1 / +2
Query: 490 NQRMKHC*IKGCE*ST*LSQKLLYFSIPILSHGFIFPL*CSTAPSLIVARSTVV*PSPKT 669
NQ HC KG *ST SQ+ LYFSIPI +HG FPL C+TAP I ST V*P+P T
Sbjct: 185 NQCKLHCCNKG*L*STYFSQRDLYFSIPIFNHGLEFPLKCNTAPFSIK*GSTFV*PNPNT 364
Query: 670 CHLGSNASTKP*KARSPGGKDPSFHRV 750
CH GS S P*K +SPGG PSFH V
Sbjct: 365 CHEGSKGSVNP*KVKSPGGSVPSFHSV 445
Score = 92.3 bits (195), Expect(2) = 3e-023
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +3 / +1
Query: 504 ALLNQRV*IVHIVIPKALVLLHSNFEPWLHISIVVQYCTFLDSSKIHSCVAKSQNMPFGI 683
ALL R+ IV+++ P+ LV H NF+PWL +SI VQ+ FL +I+ C+A+SQ+MP GI
Sbjct: 199 ALL**RMTIVYVLFPERLVFFHPNFQPWLGVSIEVQHSPFLYQVRINICIAQSQHMP*GI 378
Query: 684 QCFNQAIESKKSRW*RPKLP*SMI 755
Q IES+KSR *RPK P* I
Sbjct: 379 *RLCQPIESQKSRR*RPKFP*CPI 450
Score = 72.1 bits (151), Expect(2) = 1e-060
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3 / -2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
WAFGMNV DLVEWR +NVT IYHYWQE+NV
Sbjct: 540 WAFGMNVFDLVEWRKRNVTEIYHYWQEKNV 451
Score = 46.9 bits (96), Expect(2) = 8e-032
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +3 / +2
Query: 756 TLRSCQ**YMPVTFLFLHSTRSSTFIPNAQ 845
T SCQ* + VTF FLHST+S TFIPNAQ
Sbjct: 452 TFFSCQ*W*ISVTFRFLHSTKSKTFIPNAQ 541
Score = 36.3 bits (73), Expect(2) = 3e-023
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2 / +1
Query: 755 HIALLPIMIYACHILVPPFNQIKHVHTKCP 844
HI LP+++ +I + P NQI++VH+K P
Sbjct: 451 HILFLPVVVDFSYISLSPLNQIENVHSKRP 540
>gb|CV235910.1|CV235910 WS01222.B21_B08 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01222_B08 3', mRNA sequence
Length = 437
Score = 171 bits (369), Expect = 4e-042
Identities = 65/93 (69%), Positives = 73/93 (78%)
Frame = -2 / -2
Query: 743 WKLGSLPPGLLAFYGLVEALDPKWHVLGLGYTTVDLATIKEGAVLHYNGNMKPWLKIGME 564
WKLG+LPPGLL FYGL E LDP WHVLG GYT VD I++GAVLH+NGN KPWLKIGME
Sbjct: 436 WKLGTLPPGLLTFYGLTEPLDPSWHVLGWGYTNVDPHLIEKGAVLHFNGNSKPWLKIGME 257
Query: 563 KYKSFWDNYVDYSHPLIQQCFMR*LMCINIRIF 465
KYKS W+ YVDYSHPL+QQC + * + IF
Sbjct: 256 KYKSLWEKYVDYSHPLLQQCNLH*FWTWKLHIF 158
Score = 108 bits (230), Expect = 6e-023
Identities = 51/85 (60%), Positives = 55/85 (64%)
Frame = +1 / +3
Query: 490 NQRMKHC*IKGCE*ST*LSQKLLYFSIPILSHGFIFPL*CSTAPSLIVARSTVV*PSPKT 669
NQ HC KG *ST SQ+ LYFSIPI +HG FPL C+TAP I ST V*P P T
Sbjct: 183 NQCKLHCCNKG*L*STYFSQRDLYFSIPIFNHGLEFPLKCNTAPFSIK*GSTFV*PHPNT 362
Query: 670 CHLGSNASTKP*KARSPGGKDPSFH 744
CH GS S P*K +SPGG PSFH
Sbjct: 363 CHEGSKGSVNP*KVKSPGGSVPSFH 437
>gb|CV242604.1|CV242604 WS02515.B21_I09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_I09 3', mRNA sequence
Length = 904
Score = 73.5 bits (154), Expect(3) = 1e-041
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -2 / -1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPP LLAFYGL E LD +WHVLGLGY
Sbjct: 640 DQMLWKLGTLPPALLAFYGLTETLDRRWHVLGLGY 536
Score = 71.6 bits (150), Expect(3) = 1e-041
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = -2 / -1
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
+D I AV+H+NGNMKPWLK+ + +YK W+ Y++ SHP Q C
Sbjct: 526 IDDRLIDSAAVIHFNGNMKPWLKLAIGRYKPLWERYINQSHPYYQDC 386
Score = 63.8 bits (133), Expect(3) = 1e-041
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -3 / -1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WAFGMNV DL+ WR +NVT YHYWQE+N
Sbjct: 730 WAFGMNVFDLIAWRKENVTARYHYWQEQN 644
Score = 50.6 bits (104), Expect(3) = 5e-023
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1 / +3
Query: 655 PSPKTCHLGSNASTKP*KARSPGGKDPSFHRV*S 756
P+P TCHL S+ S P* AR GG PSFH +*S
Sbjct: 540 PNPNTCHLRSSVSVSP*NARRAGGSVPSFHSI*S 641
Score = 49.2 bits (101), Expect(3) = 5e-023
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2 / +2
Query: 758 IALLPIMIYACHILVPPFNQIKHVHTKCP 844
I LP+MI HI +PP NQIK+VH+KCP
Sbjct: 644 ILFLPVMIPRSHIFLPPCNQIKNVHSKCP 730
Score = 45.5 bits (93), Expect(3) = 5e-023
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +3 / +2
Query: 492 STHEALLNQRV*IVHIVIPKALVLLHSNFEPWLHISIVVQYCTFLDSSKIH 644
ST++ +L RV ++++ PK LV + F+PW H+ + V C+ ++ I+
Sbjct: 374 STNDTILVIRVALIYVPFPKRLVSANGQFQPWFHVPVKVNNCSTVNQPVIN 526
>gb|CV231822.1|CV231822 WS0195.B21_K18 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0195_K18 3', mRNA sequence
Length = 740
Score = 75.8 bits (159), Expect(3) = 4e-037
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = -2 / -3
Query: 629 IKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
I+ AV+HYNGNMKPWL+IG+ KY+S W YVDY H +++C
Sbjct: 519 IERAAVIHYNGNMKPWLEIGIPKYRSNWAKYVDYDHAYLREC 394
Score = 62.0 bits (129), Expect(3) = 4e-037
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -2 / -3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPPGL+ F+ LD +WHVLGLGY
Sbjct: 648 DRQLWKLGTLPPGLITFWKRTHPLDRRWHVLGLGY 544
Score = 55.6 bits (115), Expect(3) = 4e-037
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = -3 / -3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN+ DL EW+ +N+T +YH WQ+ N
Sbjct: 738 WAYGMNIFDLKEWKRQNITDVYHTWQKLN 652
>gb|CF232874.1|CF232874 PtaJXO0016G8G0814 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 758
Score = 70.3 bits (147), Expect(3) = 2e-035
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D TLWKLGSLPPGL+ FY L LD WHVLGLGY
Sbjct: 448 DRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGY 552
Score = 61.6 bits (128), Expect(3) = 2e-035
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = -2 / +1
Query: 629 IKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
I+ AV+HYNGN KP L + + KYK +W +V Y +P + QC
Sbjct: 577 IENAAVVHYNGNYKPXLDLAVAKYKPYWSRFVQYDNPYLHQC 702
Score = 55.6 bits (115), Expect(3) = 2e-035
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WAF MN+ DL +W+ N+TGIYH+WQ+ N
Sbjct: 358 WAFDMNMFDLKQWKISNITGIYHHWQDLN 444
>gb|CV261347.1|CV261347 WS02016.B21_I14 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02016_I14 3', mRNA sequence
Length = 742
Score = 77.1 bits (162), Expect(3) = 1e-034
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = -2 / -3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++D + I+ AV+HYNGNMKPWL++ M KY+ +W Y+ Y HP ++ C
Sbjct: 554 SIDRSEIENAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYLRNC 411
Score = 65.2 bits (136), Expect(3) = 1e-034
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -2 / -3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPPGL+ FY L L WHVLGLGY
Sbjct: 665 DRVLWKLGTLPPGLITFYNLTHPLQKSWHVLGLGY 561
Score = 42.3 bits (86), Expect(3) = 1e-034
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 829 NVLDLVEWRNKNVTGIYHYWQERN 758
N+ DL W+ K++TGIYH WQ N
Sbjct: 740 NIFDLKVWKKKDITGIYHKWQNMN 669
>gb|DT525892.1|DT525892 WS02046.C21_J03 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02046_J03 3', mRNA sequence
Length = 743
Score = 77.1 bits (162), Expect(3) = 1e-034
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = -2 / -3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++D + I+ AV+HYNGNMKPWL++ M KY+ +W Y+ Y HP ++ C
Sbjct: 555 SIDRSEIENAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYLRNC 412
Score = 65.2 bits (136), Expect(3) = 1e-034
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -2 / -3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPPGL+ FY L L WHVLGLGY
Sbjct: 666 DRVLWKLGTLPPGLITFYNLTHPLQKSWHVLGLGY 562
Score = 42.3 bits (86), Expect(3) = 1e-034
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 829 NVLDLVEWRNKNVTGIYHYWQERN 758
N+ DL W+ K++TGIYH WQ N
Sbjct: 741 NIFDLKVWKKKDITGIYHKWQNMN 670
>gb|CN549595.1|CN549595 GQ0241.B3_D18 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_D18 5', mRNA sequence
Length = 689
Score = 68.4 bits (143), Expect(3) = 2e-033
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = -2 / +1
Query: 641 DLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ ++K+ AV+HYNG KPWL+IG E + FW YV+YS+ I+ C
Sbjct: 376 NIESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIRNC 513
Score = 62.9 bits (131), Expect(3) = 2e-033
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -2 / +1
Query: 749 TLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
T+WKLG+LPP L+AF G V +DP WH+LGLGY
Sbjct: 265 TMWKLGTLPPSLIAFKGHVHPIDPFWHMLGLGY 363
Score = 49.6 bits (102), Expect(3) = 2e-033
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
WA+GMN+ DL WRN N+ YH W + N+
Sbjct: 163 WAYGMNIFDLHAWRNTNIRETYHSWMKENL 252
>gb|CA926791.1|CA926791 MTU6CR.P1.B12 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 525
Score = 75.8 bits (159), Expect(3) = 2e-033
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D TLWKLG+LPP LLAFYGL E LD +WHVLGLGY
Sbjct: 331 DQTLWKLGTLPPALLAFYGLTEPLDRRWHVLGLGY 435
Score = 63.4 bits (132), Expect(3) = 2e-033
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WAFGMN+ DL+ WR +NVT YHYWQE+N
Sbjct: 241 WAFGMNIFDLIAWRKENVTAQYHYWQEQN 327
Score = 41.8 bits (85), Expect(3) = 2e-033
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2 / +1
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGM 567
+D I AV+H+NGNMKPWLK+ +
Sbjct: 445 IDDRLIDSAAVIHFNGNMKPWLKLAI 522
>gb|CA927414.1|CA927414 MTU6CR.P8.G03 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 525
Score = 75.8 bits (159), Expect(3) = 2e-033
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D TLWKLG+LPP LLAFYGL E LD +WHVLGLGY
Sbjct: 331 DQTLWKLGTLPPALLAFYGLTEPLDRRWHVLGLGY 435
Score = 63.4 bits (132), Expect(3) = 2e-033
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WAFGMN+ DL+ WR +NVT YHYWQE+N
Sbjct: 241 WAFGMNIFDLIAWRKENVTAQYHYWQEQN 327
Score = 41.8 bits (85), Expect(3) = 2e-033
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2 / +1
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGM 567
+D I AV+H+NGNMKPWLK+ +
Sbjct: 445 IDDRLIDSAAVIHFNGNMKPWLKLAI 522
>gb|DN484940.1|DN484940 K040P50.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K040P50 3', mRNA sequence
Length = 731
Score = 77.6 bits (163), Expect(4) = 3e-033
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = -2 / -2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
+VD + I+ AV+HYNGNMKPWL++ M KY+ +W Y+ Y HP ++ C
Sbjct: 529 SVDRSEIENAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPYLRNC 386
Score = 65.2 bits (136), Expect(4) = 3e-033
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -2 / -2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPPGL+ FY L L WHVLGLGY
Sbjct: 640 DRVLWKLGTLPPGLITFYNLTHPLQKSWHVLGLGY 536
Score = 29.9 bits (59), Expect(4) = 3e-033
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 817 LVEWRNKNVTGIYHYWQERN 758
++ K++TGIYH WQ N
Sbjct: 703 ILRCEKKDITGIYHKWQNMN 644
Score = 24.9 bits (48), Expect(4) = 3e-033
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3 / -1
Query: 844 WAFGMNVLDL 815
WA+GMN+ DL
Sbjct: 728 WAYGMNIFDL 699
>gb|DT515203.1|DT515203 WS02426.B21_O22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_O22 3', mRNA sequence
Length = 918
Score = 66.1 bits (138), Expect(3) = 1e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / -3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 547 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 443
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / -3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 436 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 293
Score = 47.8 bits (98), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR + T YHYWQ N
Sbjct: 637 WAYGMNFFDLDAWRREKCTEEYHYWQNLN 551
>gb|DT512063.1|DT512063 WS02418.B21_E03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_E03 3', mRNA sequence
Length = 748
Score = 66.1 bits (138), Expect(3) = 1e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / -1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 547 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 443
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / -1
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 436 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 293
Score = 47.8 bits (98), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR + T YHYWQ N
Sbjct: 637 WAYGMNFFDLDAWRREKCTEEYHYWQNLN 551
>gb|CK097179.1|CK097179 UB42BPD03.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB42BPD03 3', mRNA sequence
Length = 740
Score = 66.1 bits (138), Expect(3) = 1e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / -2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 478 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 374
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / -2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 367 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 224
Score = 47.8 bits (98), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR + T YHYWQ N
Sbjct: 568 WAYGMNFFDLDAWRREKCTEEYHYWQNLN 482
>gb|CV240226.1|CV240226 WS0234.B21_M19 PT-MB-A-13 Populus trichocarpa cDNA clone WS0234_M19
3', mRNA sequence
Length = 733
Score = 66.1 bits (138), Expect(3) = 1e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / -2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 537 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 433
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / -2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 426 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 283
Score = 47.8 bits (98), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR + T YHYWQ N
Sbjct: 627 WAYGMNFFDLDAWRREKCTEEYHYWQNLN 541
>gb|DT507435.1|DT507435 WS02418.BR_E03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_E03 5', mRNA sequence
Length = 735
Score = 66.1 bits (138), Expect(3) = 1e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 202 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 306
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / +1
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 313 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 456
Score = 47.8 bits (98), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR + T YHYWQ N
Sbjct: 112 WAYGMNFFDLDAWRREKCTEEYHYWQNLN 198
>gb|CV257505.1|CV257505 WS0246.B21_N16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0246_N16 3', mRNA sequence
Length = 691
Score = 66.1 bits (138), Expect(3) = 1e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / -3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 548 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 444
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / -3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 437 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 294
Score = 47.8 bits (98), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR + T YHYWQ N
Sbjct: 638 WAYGMNFFDLDAWRREKCTEEYHYWQNLN 552
>gb|DT507569.1|DT507569 WS02418.BR_J21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_J21 5', mRNA sequence
Length = 665
Score = 66.1 bits (138), Expect(3) = 1e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / +2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 119 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 223
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / +2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 230 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 373
Score = 47.8 bits (98), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / +2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR + T YHYWQ N
Sbjct: 29 WAYGMNFFDLDAWRREKCTEEYHYWQNLN 115
>gb|DT512195.1|DT512195 WS02418.B21_J21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_J21 3', mRNA sequence
Length = 665
Score = 66.1 bits (138), Expect(3) = 1e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / -2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 547 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 443
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / -2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 436 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 293
Score = 47.8 bits (98), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR + T YHYWQ N
Sbjct: 637 WAYGMNFFDLDAWRREKCTEEYHYWQNLN 551
>gb|CX660230.1|CX660230 PO01019F01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01019F01 5', mRNA sequence
Length = 636
Score = 66.1 bits (138), Expect(3) = 1e-032
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 93 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 197
Score = 64.3 bits (134), Expect(3) = 1e-032
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / +3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 204 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 347
Score = 47.8 bits (98), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / +3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR + T YHYWQ N
Sbjct: 3 WAYGMNFFDLDAWRREKCTEEYHYWQNLN 89
>gb|CK318930.1|CK318930 X9P04h10 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 628
Score = 66.6 bits (139), Expect(3) = 3e-029
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D +LW+LG+LPPGL+AF+G V +DP WH+LGLGY
Sbjct: 369 DLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGY 473
Score = 51.0 bits (105), Expect(3) = 3e-029
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3 / +3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
WA+GMN+ DL WR N++ YH+W E N+
Sbjct: 273 WAYGMNIFDLEAWRKTNISTTYHHWVEENL 362
Score = 49.2 bits (101), Expect(3) = 3e-029
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +3
Query: 638 LATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
LA + V+H+NG KPWL I + + W Y+++S I+ C
Sbjct: 489 LADAETAGVIHFNGRAKPWLDIAFPQLRPLWAKYINFSDKFIRGC 623
>gb|CX654661.1|CX654661 PO02057G05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02057G05 5', mRNA sequence
Length = 368
Score = 64.3 bits (134), Expect(3) = 3e-027
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / +1
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 181 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 324
Score = 63.4 bits (132), Expect(3) = 3e-027
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + L+ WHVLGLGY
Sbjct: 70 NRTLWKLGTLPPGLIKFYSTTKPLNKSWHVLGLGY 174
Score = 32.2 bits (64), Expect(3) = 3e-027
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3 / +1
Query: 820 DLVEWRNKNVTGIYHYWQERN 758
DL WR + T YHYWQ N
Sbjct: 4 DLDAWRREKCTEKYHYWQNLN 66
>gb|CV257130.1|CV257130 WS0245.B21_M05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_M05 3', mRNA sequence
Length = 718
Score = 73.0 bits (153), Expect(2) = 5e-027
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = -2 / -3
Query: 800 QECDRHISLLAGAQCDHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
++C H D TLWKLG+LPPGL+ FY ++LD WHVLGLGY
Sbjct: 521 EKCTEHYHYWQSLNEDRTLWKLGTLPPGLITFYSTTKSLDKSWHVLGLGY 372
Score = 68.4 bits (143), Expect(2) = 5e-027
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = -2 / -3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+HYNGNMKPWL I M +YK+ W YVD +Q C
Sbjct: 365 SISMDEISNAAVIHYNGNMKPWLDIAMNQYKNLWTKYVDNDMEFVQMC 222
>gb|BU824298.1|BU824298 UB62BPE10 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 429
Score = 73.5 bits (154), Expect(2) = 5e-027
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = -2 / +3
Query: 800 QECDRHISLLAGAQCDHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+E R +SLLA + TLWKLG+LPPGL+ FY ++LD WHVLGLGY
Sbjct: 3 RENARAVSLLAEPE*GTTLWKLGTLPPGLITFYSTTKSLDKSWHVLGLGY 152
Score = 68.0 bits (142), Expect(2) = 5e-027
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = -2 / +3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+HYNGNMKPWL I M +YK+ W YVD +Q C
Sbjct: 159 SISMDEISNAAVIHYNGNMKPWLDIAMNQYKNLWTKYVDNDMEFVQTC 302
>gb|CB176640.1|CB176640 PopSC00063 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00063, mRNA sequence
Length = 473
Score = 75.8 bits (159), Expect(2) = 2e-026
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -2 / +2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D TLWKLG+LPP LLAFYGL E LD +WHVLGLGY
Sbjct: 323 DQTLWKLGTLPPALLAFYGLTEPLDRRWHVLGLGY 427
Score = 63.4 bits (132), Expect(2) = 2e-026
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3 / +2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WAFGMN+ DL+ WR +NVT YHYWQE+N
Sbjct: 233 WAFGMNIFDLIAWRKENVTAQYHYWQEQN 319
>gb|CK088858.1|CK088858 A076P21.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A076P21 3', mRNA sequence
Length = 708
Score = 72.5 bits (152), Expect(2) = 1e-025
Identities = 29/65 (44%), Positives = 37/65 (56%)
Frame = -2 / -2
Query: 845 LGIWYERA*SG*MEEQECDRHISLLAGAQCDHTLWKLGSLPPGLLAFYGLVEALDPKWHV 666
LG+ +E * G ++C + TLWKLG+LPPGL+ FY + LD WHV
Sbjct: 653 LGVRHELL*FGCWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITFYSTTKPLDKSWHV 474
Query: 665 LGLGY 651
LGLGY
Sbjct: 473 LGLGY 459
Score = 64.3 bits (134), Expect(2) = 1e-025
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / -2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 452 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 309
>gb|CK091185.1|CK091185 F056P93.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F056P93 3', mRNA sequence
Length = 724
Score = 73.0 bits (153), Expect(2) = 2e-025
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = -2 / -3
Query: 800 QECDRHISLLAGAQCDHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
++C H D TLWKLG+LPPGL+ FY ++LD WHVLGLGY
Sbjct: 596 EKCTEHYHYWQSLNEDRTLWKLGTLPPGLITFYSTTKSLDKSWHVLGLGY 447
Score = 62.9 bits (131), Expect(2) = 2e-025
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = -2 / -3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+HYNG+M PWL I M +YK+ W YVD +Q C
Sbjct: 440 SISMDEISNAAVIHYNGHMTPWLDIAMTQYKNLWTKYVDNDMEFVQMC 297
>gb|CX170763.1|CX170763 G07_69-32_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 488
Score = 67.0 bits (140), Expect(2) = 5e-024
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = -2 / -3
Query: 809 MEEQECDRHISLLAGAQCDHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ ++C + TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 483 LRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 325
Score = 64.3 bits (134), Expect(2) = 5e-024
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / -3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 318 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 175
>gb|BI127787.1|BI127787 G066P03Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 497
Score = 66.1 bits (138), Expect(2) = 9e-024
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 18 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 122
Score = 64.3 bits (134), Expect(2) = 9e-024
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / +3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 129 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 272
>gb|BU868361.1|BU868361 M115A04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 490
Score = 66.1 bits (138), Expect(2) = 9e-024
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2 / +2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ FY + LD WHVLGLGY
Sbjct: 2 NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGY 106
Score = 64.3 bits (134), Expect(2) = 9e-024
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2 / +2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I+ AV+H+NGNMKPWL I M ++K W +VDY +Q C
Sbjct: 113 SISMDEIQSAAVVHFNGNMKPWLDIAMTQFKPLWTKHVDYELEFVQAC 256
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 484,920,296
Number of Sequences: 369679
Number of extensions: 7538144
Number of successful extensions: 50876
Number of sequences better than 1.0e-020: 33
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 11124723820
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)