TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950080.2.1
(687 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU861402.1|BU861402 S001F06 Populus imbibed seed cDNA li... 278 2e-074
gb|DT496843.1|DT496843 WS01124.BR_L04 PT-P-FL-A-2 Populus t... 278 2e-074
gb|DT498496.1|DT498496 WS0115.BR_I11 PT-P-FL-A-2 Populus tr... 278 2e-074
gb|DT499496.1|DT499496 WS0118.BR_H15 PT-P-FL-A-2 Populus tr... 278 2e-074
gb|DT518003.1|DT518003 WS02435.B21_O19 PTxD-ICC-N-A-14 Popu... 277 4e-074
gb|CV256299.1|CV256299 WS0243.B21_H15 PTxD-ICC-N-A-14 Popul... 276 8e-074
gb|CV272243.1|CV272243 WS0157.B21_B10 PTxN-IB-A-6 Populus t... 276 8e-074
gb|CV239227.1|CV239227 WS0231.B21_L17 PT-MB-A-13 Populus tr... 275 2e-073
gb|CV241685.1|CV241685 WS02512.B21_P08 PT-MB-N-A-15 Populus... 275 2e-073
gb|DT479239.1|DT479239 WS02525.BR_C23 PT-MB-N-A-15 Populus ... 275 2e-073
gb|DT484355.1|DT484355 WS02525.B21_C23 PT-MB-N-A-15 Populus... 275 2e-073
gb|BU869309.1|BU869309 M128F04 Populus flower cDNA library ... 271 3e-072
gb|BU819420.1|BU819420 UA43BPD10 Populus tremula cambium cD... 269 1e-071
gb|DT498758.1|DT498758 WS0116.BR_E11 PT-P-FL-A-2 Populus tr... 259 1e-068
gb|CV250998.1|CV250998 WS0115.B21_I11 PT-P-FL-A-2 Populus t... 257 6e-068
gb|CV251228.1|CV251228 WS0116.B21_E11 PT-P-FL-A-2 Populus t... 257 6e-068
gb|BU894702.1|BU894702 X013E05 Populus wood cDNA library Po... 247 5e-065
gb|CV245956.1|CV245956 WS0259.B21_N12 PT-MB-N-A-15 Populus ... 171 5e-064
gb|CV249594.1|CV249594 WS01124.B21_L04 PT-P-FL-A-2 Populus ... 236 1e-061
gb|DT477849.1|DT477849 WS02521.BR_C16 PT-MB-N-A-15 Populus ... 235 2e-061
gb|DT482925.1|DT482925 WS02521.B21_C16 PT-MB-N-A-15 Populus... 235 2e-061
gb|DT488984.1|DT488984 WS02537.B21_P19 PT-MB-N-A-15 Populus... 235 2e-061
gb|BU875718.1|BU875718 V010E03 Populus flower cDNA library ... 232 2e-060
gb|CV251879.1|CV251879 WS0118.B21_H15 PT-P-FL-A-2 Populus t... 148 4e-059
gb|CX177599.1|CX177599 C08_45-66_06.ab1 leaf inoculated wit... 221 5e-057
gb|BU889406.1|BU889406 P020D11 Populus petioles cDNA librar... 188 3e-047
gb|CA932459.1|CA932459 MTU5CS.P13.C04 Aspen stem cDNA Libra... 175 2e-043
gb|CA928747.1|CA928747 MTU6TR.P6.D03 Aspen root cDNA Librar... 174 6e-043
gb|BU827645.1|BU827645 K006P41P Populus apical shoot cDNA l... 95 4e-024
>gb|BU861402.1|BU861402 S001F06 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 786
Score = 278 bits (602), Expect = 2e-074
Identities = 104/165 (63%), Positives = 132/165 (80%)
Frame = +2 / +2
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 161 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 340
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQTDNS+L+DRL+ RGY +K++NN+EC
Sbjct: 341 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRLSKRGYSETKISNNMEC 520
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W+ W+
Sbjct: 521 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWLTTWQ 655
Score = 96.4 bits (204), Expect(2) = 4e-025
Identities = 41/113 (36%), Positives = 72/113 (63%)
Frame = -3 / -3
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +I+ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 640 PVSQSGNVVGDIVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VPSLT*TIV 461
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN +VSL+++ +KP+ WKEIT+++++ +TFFH++ + + HQV ++ +A+++
Sbjct: 460 QNRIVSLQNHNLIKPSLWKEITTMIVHYVSTFFHYIFEFITHQVFINYVAVKL 302
Score = 38.2 bits (77), Expect(2) = 4e-025
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -1
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 309 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 214
>gb|DT496843.1|DT496843 WS01124.BR_L04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_L04 5', mRNA sequence
Length = 879
Score = 278 bits (602), Expect = 2e-074
Identities = 104/165 (63%), Positives = 132/165 (80%)
Frame = +2 / +2
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 170 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 349
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQTDNS+L+DRL+ RGY +K++NN+EC
Sbjct: 350 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRLSKRGYSETKISNNMEC 529
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W+ W+
Sbjct: 530 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWLTTWQ 664
Score = 96.4 bits (204), Expect(2) = 4e-025
Identities = 40/113 (35%), Positives = 72/113 (63%)
Frame = -3 / -3
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 649 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 470
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN +VSL+++ +KP+ WKEIT+++++ +TFFH++ + + HQV ++ +A+++
Sbjct: 469 QNRIVSLQNHNLIKPSLWKEITTMIVHYVSTFFHYIFEFITHQVFINYVAVKL 311
Score = 38.2 bits (77), Expect(2) = 4e-025
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -1
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 318 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 223
>gb|DT498496.1|DT498496 WS0115.BR_I11 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0115_I11
5', mRNA sequence
Length = 655
Score = 278 bits (602), Expect = 2e-074
Identities = 104/165 (63%), Positives = 132/165 (80%)
Frame = +2 / +1
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 148 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 327
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQTDNS+L+DRL+ RGY +K++NN+EC
Sbjct: 328 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRLSKRGYSETKISNNMEC 507
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W+ W+
Sbjct: 508 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWLTTWQ 642
Score = 96.4 bits (204), Expect(2) = 4e-025
Identities = 40/113 (35%), Positives = 72/113 (63%)
Frame = -3 / -2
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 627 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 448
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN +VSL+++ +KP+ WKEIT+++++ +TFFH++ + + HQV ++ +A+++
Sbjct: 447 QNRIVSLQNHNLIKPSLWKEITTMIVHYVSTFFHYIFEFITHQVFINYVAVKL 289
Score = 38.2 bits (77), Expect(2) = 4e-025
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -3
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 296 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 201
>gb|DT499496.1|DT499496 WS0118.BR_H15 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0118_H15
5', mRNA sequence
Length = 657
Score = 278 bits (602), Expect = 2e-074
Identities = 104/165 (63%), Positives = 132/165 (80%)
Frame = +2 / +3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 159 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 338
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQTDNS+L+DRL+ RGY +K++NN+EC
Sbjct: 339 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRLSKRGYSETKISNNMEC 518
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W+ W+
Sbjct: 519 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWLTTWQ 653
Score = 96.4 bits (204), Expect(2) = 4e-025
Identities = 40/113 (35%), Positives = 72/113 (63%)
Frame = -3 / -2
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 638 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 459
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN +VSL+++ +KP+ WKEIT+++++ +TFFH++ + + HQV ++ +A+++
Sbjct: 458 QNRIVSLQNHNLIKPSLWKEITTMIVHYVSTFFHYIFEFITHQVFINYVAVKL 300
Score = 38.2 bits (77), Expect(2) = 4e-025
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -3
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 307 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 212
>gb|DT518003.1|DT518003 WS02435.B21_O19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02435_O19 3', mRNA sequence
Length = 959
Score = 277 bits (600), Expect = 4e-074
Identities = 104/168 (61%), Positives = 133/168 (79%)
Frame = +2 / -1
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R +PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INED
Sbjct: 674 RGKKPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINED 495
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
LVCDELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+NS+L+DRL+ RGY +K++NN
Sbjct: 494 LVCDELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTENSVLYDRLSKRGYSETKISNN 315
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
+ECEIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W+ W+
Sbjct: 314 MECEIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWLTTWQ 171
Score = 94.1 bits (199), Expect(2) = 2e-024
Identities = 39/113 (34%), Positives = 71/113 (62%)
Frame = -3 / +3
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 186 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 365
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN + SL+++ +KP+ WKEIT+++++ +TFFH++ + + HQV ++ +A+++
Sbjct: 366 QNRIFSLQNHNLIKPSLWKEITTMIVHYVSTFFHYIFEFITHQVFINYVAVKL 524
Score = 38.2 bits (77), Expect(2) = 2e-024
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 517 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 612
>gb|CV256299.1|CV256299 WS0243.B21_H15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_H15 3', mRNA sequence
Length = 862
Score = 276 bits (598), Expect = 8e-074
Identities = 103/165 (62%), Positives = 132/165 (80%)
Frame = +2 / -1
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 712 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 533
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+NS+L+DRL+ RGY +K++NN+EC
Sbjct: 532 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTENSVLYDRLSKRGYSETKISNNMEC 353
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W+ W+
Sbjct: 352 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWLTTWQ 218
Score = 94.1 bits (199), Expect(2) = 2e-024
Identities = 39/113 (34%), Positives = 71/113 (62%)
Frame = -3 / +2
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 233 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 412
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN + SL+++ +KP+ WKEIT+++++ +TFFH++ + + HQV ++ +A+++
Sbjct: 413 QNRIFSLQNHNLIKPSLWKEITTMIVHYVSTFFHYIFEFITHQVFINYVAVKL 571
Score = 38.2 bits (77), Expect(2) = 2e-024
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / +3
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 564 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 659
>gb|CV272243.1|CV272243 WS0157.B21_B10 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0157_B10 3', mRNA sequence
Length = 698
Score = 276 bits (598), Expect = 8e-074
Identities = 103/165 (62%), Positives = 132/165 (80%)
Frame = +2 / -3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 687 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 508
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+NS+L+DRL+ RGY +K++NN+EC
Sbjct: 507 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTENSVLYDRLSKRGYSETKISNNMEC 328
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W+ W+
Sbjct: 327 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWLTTWQ 193
Score = 94.1 bits (199), Expect(2) = 2e-024
Identities = 39/113 (34%), Positives = 71/113 (62%)
Frame = -3 / +1
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 208 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 387
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN + SL+++ +KP+ WKEIT+++++ +TFFH++ + + HQV ++ +A+++
Sbjct: 388 QNRIFSLQNHNLIKPSLWKEITTMIVHYVSTFFHYIFEFITHQVFINYVAVKL 546
Score = 38.2 bits (77), Expect(2) = 2e-024
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / +2
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 539 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 634
>gb|CV239227.1|CV239227 WS0231.B21_L17 PT-MB-A-13 Populus trichocarpa cDNA clone WS0231_L17
3', mRNA sequence
Length = 779
Score = 275 bits (595), Expect = 2e-073
Identities = 103/165 (62%), Positives = 131/165 (79%)
Frame = +2 / -1
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 716 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 537
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+NS+L+DRL+ RGY +K++NN+EC
Sbjct: 536 DELEDLMEEGGNIVDYHGCDFFPERWFDQVVVLQTENSVLYDRLSKRGYSETKISNNMEC 357
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W W+
Sbjct: 356 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWRTTWQ 222
Score = 91.3 bits (193), Expect(2) = 1e-023
Identities = 39/113 (34%), Positives = 70/113 (61%)
Frame = -3 / +3
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 237 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 416
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN + SL+++ +KP+ WKEIT+++++ +TFFH + + + HQV ++ +A+++
Sbjct: 417 QNRIFSLQNHNLIKPSLWKEITTMIVHYVSTFFH*IFEFITHQVFINYVAVKL 575
Score = 38.2 bits (77), Expect(2) = 1e-023
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 568 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 663
>gb|CV241685.1|CV241685 WS02512.B21_P08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02512_P08 3', mRNA sequence
Length = 735
Score = 275 bits (595), Expect = 2e-073
Identities = 103/165 (62%), Positives = 131/165 (79%)
Frame = +2 / -3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 712 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 533
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+NS+L+DRL+ RGY +K++NN+EC
Sbjct: 532 DELEDLMEEGGNIVDYHGCDFFPERWFDQVVVLQTENSVLYDRLSKRGYSETKISNNMEC 353
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W W+
Sbjct: 352 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWRTTWQ 218
Score = 91.3 bits (193), Expect(2) = 1e-023
Identities = 39/113 (34%), Positives = 70/113 (61%)
Frame = -3 / +2
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 233 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 412
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN + SL+++ +KP+ WKEIT+++++ +TFFH + + + HQV ++ +A+++
Sbjct: 413 QNRIFSLQNHNLIKPSLWKEITTMIVHYVSTFFH*IFEFITHQVFINYVAVKL 571
Score = 38.2 bits (77), Expect(2) = 1e-023
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / +3
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 564 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 659
>gb|DT479239.1|DT479239 WS02525.BR_C23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_C23 5', mRNA sequence
Length = 826
Score = 275 bits (595), Expect = 2e-073
Identities = 103/165 (62%), Positives = 131/165 (79%)
Frame = +2 / +3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 117 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 296
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+NS+L+DRL+ RGY +K++NN+EC
Sbjct: 297 DELEDLMEEGGNIVDYHGCDFFPERWFDQVVVLQTENSVLYDRLSKRGYSETKISNNMEC 476
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W W+
Sbjct: 477 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWRTTWQ 611
Score = 91.3 bits (193), Expect(2) = 1e-023
Identities = 39/113 (34%), Positives = 70/113 (61%)
Frame = -3 / -3
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 596 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 417
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN + SL+++ +KP+ WKEIT+++++ +TFFH + + + HQV ++ +A+++
Sbjct: 416 QNRIFSLQNHNLIKPSLWKEITTMIVHYVSTFFH*IFEFITHQVFINYVAVKL 258
Score = 38.2 bits (77), Expect(2) = 1e-023
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -1
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 265 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 170
>gb|DT484355.1|DT484355 WS02525.B21_C23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_C23 3', mRNA sequence
Length = 828
Score = 275 bits (595), Expect = 2e-073
Identities = 103/165 (62%), Positives = 131/165 (79%)
Frame = +2 / -3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 712 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 533
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+NS+L+DRL+ RGY +K++NN+EC
Sbjct: 532 DELEDLMEEGGNIVDYHGCDFFPERWFDQVVVLQTENSVLYDRLSKRGYSETKISNNMEC 353
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W W+
Sbjct: 352 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWRTTWQ 218
Score = 91.3 bits (193), Expect(2) = 1e-023
Identities = 39/113 (34%), Positives = 70/113 (61%)
Frame = -3 / +2
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 233 PVSQSGNVVGDVVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 412
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN + SL+++ +KP+ WKEIT+++++ +TFFH + + + HQV ++ +A+++
Sbjct: 413 QNRIFSLQNHNLIKPSLWKEITTMIVHYVSTFFH*IFEFITHQVFINYVAVKL 571
Score = 38.2 bits (77), Expect(2) = 1e-023
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / +3
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 564 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 659
>gb|BU869309.1|BU869309 M128F04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 676
Score = 271 bits (586), Expect = 3e-072
Identities = 102/165 (61%), Positives = 130/165 (78%)
Frame = +2 / +3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 159 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 338
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
D LED+MEEGG +VDYHGCDFFPERWFD VVVLQT+NS+L+DRL+ RGY +K++NN+EC
Sbjct: 339 D*LEDLMEEGGNIVDYHGCDFFPERWFDQVVVLQTENSVLYDRLSKRGYSETKISNNMEC 518
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
EIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W W+
Sbjct: 519 EIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWRTTWQ 653
Score = 93.6 bits (198), Expect(2) = 3e-024
Identities = 41/113 (36%), Positives = 71/113 (62%)
Frame = -3 / -3
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +++ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 638 PVSQSGNVVGDVVDRITP*RHHNTFWITFFCLLQQDLEDFTFHVVGYLRL*VASLA*TIV 459
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN + SL+++ +KP+ WKEIT+++++ +TFFH V +L+ HQV ++ +A+++
Sbjct: 458 QNRIFSLQNHNLIKPSLWKEITTMIVHYVSTFFH*VFELITHQVFINYVAVKL 300
Score = 38.2 bits (77), Expect(2) = 3e-024
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -1
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 307 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 212
>gb|BU819420.1|BU819420 UA43BPD10 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 613
Score = 269 bits (582), Expect = 1e-071
Identities = 101/147 (68%), Positives = 125/147 (85%)
Frame = +2 / +2
Query: 95 SLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHG 274
S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVCDELED+MEEGG +VDYHG
Sbjct: 11 SALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVCDELEDIMEEGGNIVDYHG 190
Query: 275 CDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDI 454
CDFFPERWFD VVVLQTDNS+L+DRL+ RGY K++NN+ECEIFQVLLEEA+ESY E I
Sbjct: 191 CDFFPERWFDQVVVLQTDNSVLYDRLSKRGYSEKKISNNMECEIFQVLLEEAKESYPEGI 370
Query: 455 VMPLRSDNVEDISRNVGALTDWVNNWR 535
V+ LRSD+++DI+ N+ LT W+ W+
Sbjct: 371 VVALRSDSIDDITNNIATLTHWLTTWQ 451
Score = 95.5 bits (202), Expect(2) = 1e-024
Identities = 41/113 (36%), Positives = 72/113 (63%)
Frame = -3 / -1
Query: 520 PVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIM 341
PV Q V +I+ +T HH+ + LL++ LEDF +VVG L V S I+
Sbjct: 436 PVSQSGNVVGDIVDRITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLLL*VPSLA*TIV 257
Query: 340 QN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QN +VSL+++ +KP+ WKEIT+++++ +TFFH++ + + HQV ++ +A+++
Sbjct: 256 QNRIVSLQNHNLIKPSLWKEITTMIVHYVSTFFHYIFEFITHQVFINYVAVKL 98
Score = 37.7 bits (76), Expect(2) = 1e-024
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -1 / -2
Query: 180 ASQPS*RLFSRTRSPMLTWRRPAASARSE 94
+S PS + FS T+SP+L WR ASAR++
Sbjct: 96 SSHPSCKFFSLTKSPILMWRNWVASARAD 10
>gb|DT498758.1|DT498758 WS0116.BR_E11 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_E11
5', mRNA sequence
Length = 654
Score = 259 bits (561), Expect = 1e-068
Identities = 99/151 (65%), Positives = 124/151 (82%)
Frame = +2 / +3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 198 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 377
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQTDNS+L+DRL+ RGY +K++NN+EC
Sbjct: 378 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRLSKRGYSETKISNNMEC 557
Query: 401 EIFQVLLEEARESYREDIVMPLRSDNVEDIS 493
EIFQVLLEEA+ESY E IV+ LRSD+++DI+
Sbjct: 558 EIFQVLLEEAKESYPEGIVVALRSDSIDDIT 650
Score = 94.1 bits (199), Expect(2) = 2e-024
Identities = 37/103 (35%), Positives = 69/103 (66%)
Frame = -3 / -2
Query: 490 NILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSARQAIMQN*VVSLEHN 311
+++ +T HH+ + LL++ LEDF +VVG L VTS I+QN +VSL+++
Sbjct: 647 DVVDGITP*RHHNAFWITFFCLLQQDLEDFTFHVVGYLRL*VTSLA*TIVQNRIVSLQNH 468
Query: 310 YEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
+KP+ WKEIT+++++ +TFFH++ + + HQV ++ +A+++
Sbjct: 467 NLIKPSLWKEITTMIVHYVSTFFHYIFEFITHQVFINYVAVKL 339
Score = 38.2 bits (77), Expect(2) = 2e-024
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -3
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 346 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 251
>gb|CV250998.1|CV250998 WS0115.B21_I11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0115_I11 3', mRNA sequence
Length = 642
Score = 257 bits (555), Expect = 6e-068
Identities = 95/136 (69%), Positives = 119/136 (87%)
Frame = +2 / -1
Query: 128 VNIGDLVREKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDL 307
+NIGDLV+EK+LHDGWD +C++INEDLVCDELED+MEEGG +VDYHGCDFFPERWFD
Sbjct: 642 INIGDLVKEKNLHDGWDDQFDCYIINEDLVCDELEDIMEEGGNIVDYHGCDFFPERWFDQ 463
Query: 308 VVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVED 487
VVVLQTDNS+L+DRL+ RGY +K++NN+ECEIFQVLLEEA+ESY E IV+ LRSD+++D
Sbjct: 462 VVVLQTDNSVLYDRLSKRGYSETKISNNMECEIFQVLLEEAKESYPEGIVVALRSDSIDD 283
Query: 488 ISRNVGALTDWVNNWR 535
I+ N+ LT W+ W+
Sbjct: 282 ITNNIATLTHWLTTWQ 235
>gb|CV251228.1|CV251228 WS0116.B21_E11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0116_E11 3', mRNA sequence
Length = 631
Score = 257 bits (555), Expect = 6e-068
Identities = 95/136 (69%), Positives = 119/136 (87%)
Frame = +2 / -1
Query: 128 VNIGDLVREKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDL 307
+NIGDLV+EK+LHDGWD +C++INEDLVCDELED+MEEGG +VDYHGCDFFPERWFD
Sbjct: 631 INIGDLVKEKNLHDGWDDQFDCYIINEDLVCDELEDIMEEGGNIVDYHGCDFFPERWFDQ 452
Query: 308 VVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVED 487
VVVLQTDNS+L+DRL+ RGY +K++NN+ECEIFQVLLEEA+ESY E IV+ LRSD+++D
Sbjct: 451 VVVLQTDNSVLYDRLSKRGYSETKISNNMECEIFQVLLEEAKESYPEGIVVALRSDSIDD 272
Query: 488 ISRNVGALTDWVNNWR 535
I+ N+ LT W+ W+
Sbjct: 271 ITNNIATLTHWLTTWQ 224
>gb|BU894702.1|BU894702 X013E05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 536
Score = 247 bits (534), Expect = 5e-065
Identities = 92/133 (69%), Positives = 114/133 (85%)
Frame = +2 / +2
Query: 137 GDLVREKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVV 316
GDLV+EK+LHDGWD EC++INEDLVC ELED+MEEGG +VDYHGCDFFPERWFD VV
Sbjct: 2 GDLVKEKNLHDGWDDQFECYIINEDLVCGELEDIMEEGGNIVDYHGCDFFPERWFDQVVA 181
Query: 317 LQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISR 496
LQTDNS+L+DRL+ RGY +K++NN+ECEIFQVLLEEA+ESY E IV+ LRSD+++DI+
Sbjct: 182 LQTDNSVLYDRLSKRGYSETKISNNMECEIFQVLLEEAKESYPEGIVVALRSDSIDDITN 361
Query: 497 NVGALTDWVNNWR 535
N+ LT W+ W+
Sbjct: 362 NIATLTHWLTTWQ 400
>gb|CV245956.1|CV245956 WS0259.B21_N12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_N12 3', mRNA sequence
Length = 774
Score = 171 bits (368), Expect(2) = 5e-064
Identities = 62/80 (77%), Positives = 74/80 (92%)
Frame = +2 / -3
Query: 122 RHVNIGDLVREKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWF 301
RH+N+GDLV+EK+LHDGWD +C++INEDLVCDELED+MEEGG +VDYHGCDFFPERWF
Sbjct: 757 RHINMGDLVKEKNLHDGWDDQFDCYIINEDLVCDELEDIMEEGGNIVDYHGCDFFPERWF 578
Query: 302 DLVVVLQTDNSILHDRLTGR 361
D VVVLQTDNS+L+DRL+ R
Sbjct: 577 DQVVVLQTDNSVLYDRLSKR 518
Score = 95.5 bits (202), Expect(2) = 5e-064
Identities = 35/59 (59%), Positives = 48/59 (81%)
Frame = +2 / -3
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWR 535
RGY +K++NN+ECEIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+ LT W+ W+
Sbjct: 385 RGYSETKISNNMECEIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWLTTWQ 209
>gb|CV249594.1|CV249594 WS01124.B21_L04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_L04 3', mRNA sequence
Length = 601
Score = 236 bits (510), Expect = 1e-061
Identities = 89/128 (69%), Positives = 108/128 (84%)
Frame = +2 / -3
Query: 152 EKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDN 331
EK+LHDGWD +C++ NEDLVCDELED+MEEGG +VDYHGCDFFPERWFD VVVLQTDN
Sbjct: 599 EKNLHDGWDDQSDCYISNEDLVCDELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDN 420
Query: 332 SILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGAL 511
S+L+DRL+ RGY K++NN+ECEIFQVLLEEA+ESY E IV+ LRSD++ DIS N+ L
Sbjct: 419 SVLYDRLSKRGYSEMKISNNMECEIFQVLLEEAKESYPEGIVLALRSDSIGDISNNIATL 240
Query: 512 TDWVNNWR 535
T W+ W+
Sbjct: 239 THWLTTWQ 216
>gb|DT477849.1|DT477849 WS02521.BR_C16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_C16 5', mRNA sequence
Length = 848
Score = 235 bits (508), Expect = 2e-061
Identities = 87/129 (67%), Positives = 110/129 (85%)
Frame = +2 / +1
Query: 149 REKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTD 328
+EK+LHDGWD +C++INEDLVCDELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+
Sbjct: 343 KEKNLHDGWDDQFDCYIINEDLVCDELEDLMEEGGNIVDYHGCDFFPERWFDQVVVLQTE 522
Query: 329 NSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGA 508
NS+L+DRL+ R Y +K++NN+ECEIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+
Sbjct: 523 NSVLYDRLSKRDYSETKISNNMECEIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIAT 702
Query: 509 LTDWVNNWR 535
LT W W+
Sbjct: 703 LTHWRTTWQ 729
>gb|DT482925.1|DT482925 WS02521.B21_C16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_C16 3', mRNA sequence
Length = 831
Score = 235 bits (508), Expect = 2e-061
Identities = 87/129 (67%), Positives = 110/129 (85%)
Frame = +2 / -2
Query: 149 REKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTD 328
+EK+LHDGWD +C++INEDLVCDELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+
Sbjct: 623 KEKNLHDGWDDQFDCYIINEDLVCDELEDLMEEGGNIVDYHGCDFFPERWFDQVVVLQTE 444
Query: 329 NSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGA 508
NS+L+DRL+ R Y +K++NN+ECEIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+
Sbjct: 443 NSVLYDRLSKRDYSETKISNNMECEIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIAT 264
Query: 509 LTDWVNNWR 535
LT W W+
Sbjct: 263 LTHWRTTWQ 237
>gb|DT488984.1|DT488984 WS02537.B21_P19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_P19 3', mRNA sequence
Length = 835
Score = 235 bits (508), Expect = 2e-061
Identities = 87/129 (67%), Positives = 110/129 (85%)
Frame = +2 / -3
Query: 149 REKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTD 328
+EK+LHDGWD +C++INEDLVCDELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+
Sbjct: 623 KEKNLHDGWDDQFDCYIINEDLVCDELEDLMEEGGNIVDYHGCDFFPERWFDQVVVLQTE 444
Query: 329 NSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGA 508
NS+L+DRL+ R Y +K++NN+ECEIFQVLLEEA+ESY E IV+ LRSD+++DI+ N+
Sbjct: 443 NSVLYDRLSKRDYSETKISNNMECEIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIAT 264
Query: 509 LTDWVNNWR 535
LT W W+
Sbjct: 263 LTHWRTTWQ 237
>gb|BU875718.1|BU875718 V010E03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 542
Score = 232 bits (501), Expect = 2e-060
Identities = 87/132 (65%), Positives = 108/132 (81%)
Frame = +2 / +3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 147 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 326
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQT+NS+L+DRL+ RGY +K++NN+EC
Sbjct: 327 DELEDLMEEGGNIVDYHGCDFFPERWFDQVVVLQTENSVLYDRLSKRGYSETKISNNMEC 506
Query: 401 EIFQVLLEEARE 436
EIFQVLLEEA+E
Sbjct: 507 EIFQVLLEEAKE 542
Score = 83.5 bits (176), Expect(2) = 3e-021
Identities = 33/82 (40%), Positives = 58/82 (70%)
Frame = -3 / -1
Query: 427 LLEEHLEDFALYVVGELGTHVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTT 248
LL++ LEDF +VVG L V S I+QN + SL+++ +KP+ WKEIT+++++ +T
Sbjct: 533 LLQQDLEDFTFHVVGYLRL*VASLA*TIVQNRIFSLQNHNLIKPSLWKEITTMIVHYVST 354
Query: 247 FFHHVLKLVAHQVLVDDMALEV 182
FFH + +L+ HQV ++ +A+++
Sbjct: 353 FFH*IFELITHQVFINYVAVKL 288
Score = 38.2 bits (77), Expect(2) = 3e-021
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -2
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 295 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 200
>gb|CV251879.1|CV251879 WS0118.B21_H15 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0118_H15 3', mRNA sequence
Length = 627
Score = 148 bits (317), Expect(2) = 4e-059
Identities = 56/85 (65%), Positives = 72/85 (84%)
Frame = +2 / -2
Query: 281 FFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVM 460
FFPERWFD VVVLQTDNS+L+DRL+ RGY +K++NN+ECEIFQVLLEEA+ESY E IV+
Sbjct: 488 FFPERWFDQVVVLQTDNSVLYDRLSKRGYSETKISNNMECEIFQVLLEEAKESYPEGIVV 309
Query: 461 PLRSDNVEDISRNVGALTDWVNNWR 535
LRSD+++DI+ N+ LT W+ W+
Sbjct: 308 ALRSDSIDDITNNIATLTHWLTTWQ 234
Score = 100 bits (213), Expect(2) = 4e-059
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = +2 / -3
Query: 146 VREKSLHDGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFF 286
V+EK+LHDGWD +C++INEDLVCDELED+MEEGG +VDYHGCD F
Sbjct: 622 VKEKNLHDGWDDQFDCYIINEDLVCDELEDIMEEGGNIVDYHGCDSF 482
>gb|CX177599.1|CX177599 C08_45-66_06.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 654
Score = 221 bits (476), Expect = 5e-057
Identities = 83/127 (65%), Positives = 102/127 (80%)
Frame = +2 / +3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 273 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 452
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIEC 400
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQTDNS+L+DRL+ RGY +K++NN+ C
Sbjct: 453 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRLSKRGYSETKISNNMGC 632
Query: 401 EIFQVLL 421
EIFQVLL
Sbjct: 633 EIFQVLL 653
Score = 84.0 bits (177), Expect(2) = 2e-021
Identities = 32/80 (40%), Positives = 58/80 (72%)
Frame = -3 / -2
Query: 421 EEHLEDFALYVVGELGTHVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFF 242
++ LEDF +VVG L VTS I+QN +VSL+++ +KP+ WKEIT+++++ +TFF
Sbjct: 653 QQDLEDFTSHVVGYLCL*VTSLA*TIVQNRIVSLQNHNLIKPSLWKEITTMIVHYVSTFF 474
Query: 241 HHVLKLVAHQVLVDDMALEV 182
H++ + + HQV ++ +A+++
Sbjct: 473 HYIFEFITHQVFINYVAVKL 414
Score = 38.2 bits (77), Expect(2) = 2e-021
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -3
Query: 189 SRSASQPS*RLFSRTRSPMLTWRRPAASARSE 94
S +S PS + FS T+SP+L WR ASAR++
Sbjct: 421 SNWSSHPSCKFFSLTKSPILMWRNWVASARAD 326
>gb|BU889406.1|BU889406 P020D11 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 573
Score = 188 bits (405), Expect = 3e-047
Identities = 70/107 (65%), Positives = 85/107 (79%)
Frame = +2 / +1
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 253 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 432
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGR 361
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQTDNS+L+DRL+ R
Sbjct: 433 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRLSKR 573
>gb|CA932459.1|CA932459 MTU5CS.P13.C04 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 426
Score = 175 bits (377), Expect = 2e-043
Identities = 64/99 (64%), Positives = 77/99 (77%)
Frame = +2 / -2
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+L+ S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 299 KPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 120
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSI 337
DELED+MEEGG +VDYHGCDFFPERWFD VV LQTDNS+
Sbjct: 119 DELEDLMEEGGNIVDYHGCDFFPERWFDQVVALQTDNSV 3
>gb|CA928747.1|CA928747 MTU6TR.P6.D03 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 487
Score = 174 bits (374), Expect = 6e-043
Identities = 64/99 (64%), Positives = 77/99 (77%)
Frame = +2 / -3
Query: 41 RPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVC 220
+PN+ + S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVC
Sbjct: 299 KPNISITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDGWDDQFDCYIINEDLVC 120
Query: 221 DELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSI 337
DELED+MEEGG +VDYHGCDFFPERWFD VVVLQTDNS+
Sbjct: 119 DELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSV 3
>gb|BU827645.1|BU827645 K006P41P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 373
Score = 94.5 bits (200), Expect(2) = 4e-024
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2 / +2
Query: 95 SLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINEDLVCDELEDMME 244
S LA+A RH+NIGDLV+EK+LHDGWD +C++INEDLVCDELED+M+
Sbjct: 179 SALAEATQFRHINIGDLVQEKNLHDGWDDQFDCYIINEDLVCDELEDIMD 328
Score = 36.8 bits (74), Expect(2) = 4e-024
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2 / +1
Query: 245 EGGILVDYHGCDFF 286
EGG +VDYHGCDFF
Sbjct: 331 EGGNIVDYHGCDFF 372
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 271,283,388
Number of Sequences: 369679
Number of extensions: 3340647
Number of successful extensions: 37307
Number of sequences better than 1.0e-020: 30
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 8664018843
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)