TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943885.2.1
(581 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT488152.1|DT488152 WS02535.B21_K09 PT-MB-N-A-15 Populus... 135 2e-045
gb|DT517193.1|DT517193 WS02433.B21_J11 PTxD-ICC-N-A-14 Popu... 136 4e-045
gb|DT483477.1|DT483477 WS02522.B21_L06 PT-MB-N-A-15 Populus... 114 4e-043
gb|DN485267.1|DN485267 M123B10.3pR Populus female catkins c... 114 4e-043
gb|CV239371.1|CV239371 WS0232.B21_D04 PT-MB-A-13 Populus tr... 114 4e-043
gb|CA923539.1|CA923539 MTU7CL.P11.G02 Aspen leaf cDNA Libra... 116 7e-043
gb|DN488227.1|DN488227 R042F04.3pR Populus root cDNA librar... 137 1e-041
gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus... 132 7e-041
gb|DN491046.1|DN491046 UM56TC12.3pR Populus female catkins ... 118 4e-040
gb|CV257070.1|CV257070 WS0245.B21_J10 PTxD-ICC-N-A-14 Popul... 129 6e-040
gb|CV254856.1|CV254856 WS02411.B21_G05 PTxD-ICC-N-A-14 Popu... 123 1e-038
gb|DT513869.1|DT513869 WS02423.B21_D17 PTxD-ICC-N-A-14 Popu... 123 1e-038
gb|CX658054.1|CX658054 PO01008G05 Poplar SC cDNA library Po... 116 2e-038
gb|CV243415.1|CV243415 WS02518.B21_N01 PT-MB-N-A-15 Populus... 118 1e-037
gb|DN488765.1|DN488765 S031D05.3pR Populus imbibed seed cDN... 118 6e-037
gb|DV466266.1|DV466266 MTUNUL1.P49.D07 NUL Populus fremonti... 116 1e-034
gb|DT504462.1|DT504462 WS01313.B21_H10 PTxD-IL-FL-A-4 Popul... 108 2e-034
gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Popu... 98 2e-032
gb|CV244301.1|CV244301 WS0254.B21_E14 PT-MB-N-A-15 Populus ... 138 2e-032
gb|CV245380.1|CV245380 WS0257.B21_E04 PT-MB-N-A-15 Populus ... 138 2e-032
gb|DT489381.1|DT489381 WS02542.B21_B04 PT-MB-N-A-15 Populus... 138 2e-032
gb|DT492065.1|DT492065 WS02549.C21_J03 PT-MB-N-A-15 Populus... 138 2e-032
gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremonti... 109 5e-032
gb|CV240642.1|CV240642 WS0251.B21_P03 PT-MB-N-A-15 Populus ... 96 6e-032
gb|CV283422.1|CV283422 WS0187.B21_E19 PTxD-IL-N-A-9 Populus... 107 9e-032
gb|BU837200.1|BU837200 T095H09 Populus apical shoot cDNA li... 110 9e-032
gb|CV243768.1|CV243768 WS0252.B21_M19 PT-MB-N-A-15 Populus ... 107 2e-031
gb|DT491072.1|DT491072 WS02546.C21.1_L18 PT-MB-N-A-15 Popul... 107 2e-031
gb|DT505915.1|DT505915 WS01812.C21_D06 PTxD-IL-N-A-9 Populu... 107 2e-031
gb|CK100898.1|CK100898 F007P86.5pR Populus flower cDNA libr... 135 2e-031
gb|CF119369.1|CF119369 MTU10CS.P16.H11 Aspen stem cDNA Libr... 105 4e-031
gb|CF119771.1|CF119771 MTU10CS.P6.B05 Aspen stem cDNA Libra... 105 4e-031
gb|BU891342.1|BU891342 P048H10 Populus petioles cDNA librar... 133 9e-031
gb|CN520132.1|CN520132 GQ0106.B3_K07 GQ010 Populus trichoca... 133 9e-031
gb|CV236341.1|CV236341 WS01223.B21_M04 PT-GT-FL-A-3 Populus... 133 9e-031
gb|CV282585.1|CV282585 WS0185.B21_A14 PTxD-IL-N-A-9 Populus... 133 9e-031
gb|CA933833.1|CA933833 MTU3TS.P13.C08 Aspen stem cDNA Libra... 105 2e-030
gb|CX178075.1|CX178075 G12_45-100_14.ab1 leaf inoculated wi... 92 7e-030
gb|DT487894.1|DT487894 WS02534.B21_P09 PT-MB-N-A-15 Populus... 108 1e-029
gb|CV279584.1|CV279584 WS0132.B21_G07 PTxD-IL-FL-A-4 Populu... 108 1e-029
gb|CV279650.1|CV279650 WS0132.B21_L13 PTxD-IL-FL-A-4 Populu... 108 1e-029
gb|DN490532.1|DN490532 UL60PB12.3pR Populus cold stressed l... 95 8e-029
gb|DT518857.1|DT518857 WS02439.B21_H24 PTxD-ICC-N-A-14 Popu... 81 6e-028
gb|CV249527.1|CV249527 WS01124.B21_H12 PT-P-FL-A-2 Populus ... 95 8e-028
gb|AJ774738.1|AJ774738 AJ774738 Populus euphratica shoot 3-... 116 1e-027
gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populu... 105 3e-027
gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus t... 105 3e-027
gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populu... 105 3e-027
gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Popul... 105 3e-027
gb|CV257201.1|CV257201 WS0245.B21_P10 PTxD-ICC-N-A-14 Popul... 96 1e-026
gb|DT516411.1|DT516411 WS02431.B21_E19 PTxD-ICC-N-A-14 Popu... 96 1e-026
gb|CV255664.1|CV255664 WS02414.B21_K19 PTxD-ICC-N-A-14 Popu... 96 1e-026
gb|CV229269.1|CV229269 WS01912.B21_M05 PT-DX-N-A-10 Populus... 91 1e-026
gb|BI122064.1|BI122064 I001P93P Populus leaf cDNA library P... 87 1e-026
gb|CK095578.1|CK095578 UA14CPH12.3pR Populus dormant cambiu... 111 4e-026
gb|DT512707.1|DT512707 WS02420.B21_A09 PTxD-ICC-N-A-14 Popu... 97 7e-026
gb|BP931106.1|BP931106 BP931106 full-length enriched poplar... 116 8e-026
gb|BP932015.1|BP932015 BP932015 full-length enriched poplar... 116 8e-026
gb|BP935319.1|BP935319 BP935319 full-length enriched poplar... 116 8e-026
gb|DT477027.1|DT477027 WS01231.B21_L09 PT-GT-FL-A-3 Populus... 101 9e-026
gb|DT476446.1|DT476446 WS01229.B21_J24 PT-GT-FL-A-3 Populus... 94 1e-025
gb|CV265063.1|CV265063 WS02026.B21_D16 PTxN-IB-N-A-11 Popul... 89 2e-025
gb|CV266938.1|CV266938 WS02030.B21_G03 PTxN-IB-N-A-11 Popul... 89 2e-025
gb|BP930563.1|BP930563 BP930563 full-length enriched poplar... 95 2e-025
gb|CV283775.1|CV283775 WS0188.B21_E01 PTxD-IL-N-A-9 Populus... 94 3e-025
gb|CV277559.1|CV277559 WS0143.B21_O18 PTxD-IL-A-5 Populus t... 94 3e-025
gb|CA927209.1|CA927209 MTU6CR.P6.C10 Aspen root cDNA Librar... 94 5e-025
gb|CV280244.1|CV280244 WS0135.B21_I02 PTxD-IL-FL-A-4 Populu... 113 8e-025
gb|CV258292.1|CV258292 WS0249.B21_B21 PTxD-ICC-N-A-14 Popul... 92 8e-025
gb|DN500518.1|DN500518 UL60PB12.5pR Populus cold stressed l... 95 1e-024
gb|BP930106.1|BP930106 BP930106 full-length enriched poplar... 89 2e-024
gb|CV234524.1|CV234524 WS01215.B21.1_D13 PT-GT-FL-A-3 Popul... 112 2e-024
gb|BP934618.1|BP934618 BP934618 full-length enriched poplar... 100 3e-024
gb|BP933703.1|BP933703 BP933703 full-length enriched poplar... 88 3e-024
gb|CK089691.1|CK089691 C027P32.3pR Populus strain T89 leave... 111 4e-024
gb|CK091254.1|CK091254 F066P42.3pR Populus flower cDNA libr... 96 4e-024
gb|BP930345.1|BP930345 BP930345 full-length enriched poplar... 70 4e-024
gb|CV233333.1|CV233333 WS0121.B21_P12 PT-GT-FL-A-3 Populus ... 111 5e-024
gb|CV233345.1|CV233345 WS01210.B21_A08 PT-GT-FL-A-3 Populus... 111 5e-024
gb|CV235889.1|CV235889 WS01221.B21_P24 PT-GT-FL-A-3 Populus... 111 5e-024
gb|CV236193.1|CV236193 WS01223.B21_D08 PT-GT-FL-A-3 Populus... 111 5e-024
gb|DT476162.1|DT476162 WS01228.B21_I22 PT-GT-FL-A-3 Populus... 111 5e-024
gb|BU832863.1|BU832863 T039B01 Populus apical shoot cDNA li... 109 1e-023
gb|DT482538.1|DT482538 WS02520.B21_B11 PT-MB-N-A-15 Populus... 91 2e-023
gb|DT517614.1|DT517614 WS02434.B21_M23 PTxD-ICC-N-A-14 Popu... 87 4e-023
gb|BI071939.1|BI071939 C066P40U Populus strain T89 leaves P... 107 5e-023
gb|CV282786.1|CV282786 WS0185.B21_J13 PTxD-IL-N-A-9 Populus... 81 7e-023
gb|CK110405.1|CK110405 N056F06 Populus bark cDNA library Po... 107 7e-023
gb|CN520702.1|CN520702 GQ0105.B3_G16 GQ010 Populus trichoca... 107 7e-023
gb|CV240216.1|CV240216 WS0234.B21_M06 PT-MB-A-13 Populus tr... 107 7e-023
gb|DN492164.1|DN492164 V051F01.3pR Populus male catkins cDN... 107 7e-023
gb|DN495521.1|DN495521 N056F06.5pR Populus bark cDNA librar... 107 7e-023
gb|DT486941.1|DT486941 WS02532.B21_F17 PT-MB-N-A-15 Populus... 107 7e-023
gb|CK091588.1|CK091588 F109P71.3pR Populus flower cDNA libr... 106 9e-023
gb|CV256857.1|CV256857 WS0244.B21_P21 PTxD-ICC-N-A-14 Popul... 84 1e-022
gb|DT485768.1|DT485768 WS02529.B21_B22 PT-MB-N-A-15 Populus... 75 2e-022
gb|DT480509.1|DT480509 WS02529.BR_B22 PT-MB-N-A-15 Populus ... 75 2e-022
gb|DN490997.1|DN490997 UM51TA09.3pR Populus female catkins ... 96 2e-022
gb|DT492006.1|DT492006 WS02549.C21_G15 PT-MB-N-A-15 Populus... 74 3e-022
gb|CK102642.1|CK102642 G085P75.5pR Populus tension wood cDN... 99 3e-022
gb|DN488894.1|DN488894 S050D08.3pR Populus imbibed seed cDN... 97 4e-022
gb|CV271864.1|CV271864 WS0155.B21_O06 PTxN-IB-A-6 Populus t... 98 4e-022
gb|CX177292.1|CX177292 G05_69-104_13.ab1 leaf inoculated wi... 88 4e-022
gb|CV264739.1|CV264739 WS02025.B21_F12 PTxN-IB-N-A-11 Popul... 91 6e-022
gb|DT487275.1|DT487275 WS02533.B21_E03 PT-MB-N-A-15 Populus... 94 1e-021
gb|CV243556.1|CV243556 WS0252.B21_D08 PT-MB-N-A-15 Populus ... 94 1e-021
gb|BU864912.1|BU864912 S046E08 Populus imbibed seed cDNA li... 102 2e-021
gb|BU885976.1|BU885976 R038G09 Populus root cDNA library Po... 101 3e-021
gb|CX183741.1|CX183741 A09_45-83_01.ab1 leaf inoculated wit... 93 5e-021
gb|CX178016.1|CX178016 G09_45-81_13.ab1 leaf inoculated wit... 93 5e-021
gb|CX180397.1|CX180397 C08_45-107_06.ab1 leaf inoculated wi... 93 5e-021
gb|CX180523.1|CX180523 A03_45-107_01.ab1 leaf inoculated wi... 93 5e-021
gb|CV244020.1|CV244020 WS0253.B21_I02 PT-MB-N-A-15 Populus ... 82 5e-021
gb|CV255934.1|CV255934 WS0242.B21_H10 PTxD-ICC-N-A-14 Popul... 86 7e-021
>gb|DT488152.1|DT488152 WS02535.B21_K09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_K09 3', mRNA sequence
Length = 891
Score = 135 bits (290), Expect(2) = 2e-045
Identities = 52/106 (49%), Positives = 74/106 (69%)
Frame = +2 / -3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
+Q++EL GL +S F+WV+R + L + E+G +V + PQ+ +LA++A GC
Sbjct: 826 KQIEELSWGLKNSNYYFLWVIRESGQINLPKTFLEDLGEKGCVVGWSPQVRMLANEAVGC 647
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRM 319
FLTHCGWNSTIE+++ G+PMVAMPQW DQP AK VE W +G+R+
Sbjct: 646 FLTHCGWNSTIEALSLGMPMVAMPQWTDQPPNAKLVEDVWKVGIRV 509
Score = 73.9 bits (155), Expect(2) = 2e-021
Identities = 35/59 (59%), Positives = 37/59 (62%)
Frame = -3 / +3
Query: 291 STYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*GQKGTMRPLS 115
ST LA GWS H GIATIG P SIVEF PQCVRK P A AS +*G T +P S
Sbjct: 537 STSLAFGGWSVHCGIATIGMPRLNASIVEFQPQCVRKHPTASFASILT*GLHPTTQPFS 713
Score = 66.6 bits (139), Expect(2) = 2e-045
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +2 / -3
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
KG + R E+E CI+EVM G + +NA +W A EA+ EGGSSDKNI E +K L
Sbjct: 496 KGIVPRDEIECCIKEVMEGAKGEEMRKNAKKWRELAIEAVSEGGSSDKNIDELVSKIL 323
Score = 48.3 bits (99), Expect(2) = 2e-021
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -3 / +3
Query: 495 KYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEPF 322
+ L NS+MFLSE PPS AS+A + AF + +P ITSL+ S S L PF
Sbjct: 324 RILDTNSSMFLSEEPPSLTASIANSLHFLAFFLISSPFAPSITSLIQHSISSLGTIPF 497
>gb|DT517193.1|DT517193 WS02433.B21_J11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_J11 3', mRNA sequence
Length = 853
Score = 136 bits (292), Expect(2) = 4e-045
Identities = 52/107 (48%), Positives = 75/107 (70%)
Frame = +2 / -3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
+Q++EL GL +S F+WV+R + L + E+G +V + PQ+ +LA++A GC
Sbjct: 803 KQIEELSWGLKNSNYYFLWVIRESGQINLPKTFLEDLGEKGCVVGWSPQVRMLANEAVGC 624
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
FLTHCGWNSTIE+++ G+PMVAMPQW DQP AK VE W +G+R++
Sbjct: 623 FLTHCGWNSTIEALSLGMPMVAMPQWTDQPPNAKLVEDVWKVGIRVK 483
Score = 64.8 bits (135), Expect(2) = 4e-045
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +2 / -3
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
+G + R E+E CI+EVM GE+ + A +W A EA+ EGGSSDKNI E +K L
Sbjct: 473 EGIVPRDEIECCIKEVMEGEKGEEMKKTAKKWRELAIEAVSEGGSSDKNIDELVSKIL 300
>gb|DT483477.1|DT483477 WS02522.B21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_L06 3', mRNA sequence
Length = 897
Score = 114 bits (244), Expect(3) = 4e-043
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2 / -3
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
E G++V +C QLEVLAH+A GCF+THCGWNST+E + GVPMV + + +DQP AK+VE
Sbjct: 490 ETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPMVCVTERSDQPMNAKFVED 311
Query: 296 AWGIGVRMRK 325
W +GVR +K
Sbjct: 310 VWKVGVRAKK 281
Score = 65.2 bits (136), Expect(3) = 4e-043
Identities = 28/57 (49%), Positives = 35/57 (61%)
Frame = +2 / -3
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
G + R+E+E+CIR VM GE RNA +W A+ A+ GGSSD NI EF K L
Sbjct: 271 GIVTREELEKCIRGVMDGENGEEIKRNANKWRELARSAVSVGGSSDMNINEFVVKLL 101
Score = 33.1 bits (66), Expect(3) = 4e-043
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2 / -3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNE 76
EQ++E+ GL S +PF+WV++ +E
Sbjct: 601 EQVEEIAWGLKASNRPFLWVMKESE 527
>gb|DN485267.1|DN485267 M123B10.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M123B10 3', mRNA sequence
Length = 785
Score = 114 bits (244), Expect(3) = 4e-043
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2 / -3
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
E G++V +C QLEVLAH+A GCF+THCGWNST+E + GVPMV + + +DQP AK+VE
Sbjct: 456 ETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPMVCVTERSDQPMNAKFVED 277
Query: 296 AWGIGVRMRK 325
W +GVR +K
Sbjct: 276 VWKVGVRAKK 247
Score = 65.2 bits (136), Expect(3) = 4e-043
Identities = 28/57 (49%), Positives = 35/57 (61%)
Frame = +2 / -3
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
G + R+E+E+CIR VM GE RNA +W A+ A+ GGSSD NI EF K L
Sbjct: 237 GIVTREELEKCIRGVMDGENGEEIKRNANKWRELARSAVSVGGSSDMNINEFVVKLL 67
Score = 33.1 bits (66), Expect(3) = 4e-043
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2 / -3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNE 76
EQ++E+ GL S +PF+WV++ +E
Sbjct: 567 EQVEEIAWGLKASNRPFLWVMKESE 493
>gb|CV239371.1|CV239371 WS0232.B21_D04 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_D04
3', mRNA sequence
Length = 768
Score = 114 bits (244), Expect(3) = 4e-043
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2 / -2
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
E G++V +C QLEVLAH+A GCF+THCGWNST+E + GVPMV + + +DQP AK+VE
Sbjct: 491 ETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPMVCVTERSDQPMNAKFVED 312
Query: 296 AWGIGVRMRK 325
W +GVR +K
Sbjct: 311 VWKVGVRAKK 282
Score = 65.2 bits (136), Expect(3) = 4e-043
Identities = 28/57 (49%), Positives = 35/57 (61%)
Frame = +2 / -2
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
G + R+E+E+CIR VM GE RNA +W A+ A+ GGSSD NI EF K L
Sbjct: 272 GIVTREELEKCIRGVMDGENGEEIKRNANKWRELARSAVSVGGSSDMNINEFVVKLL 102
Score = 33.1 bits (66), Expect(3) = 4e-043
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2 / -2
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNE 76
EQ++E+ GL S +PF+WV++ +E
Sbjct: 602 EQVEEIAWGLKASNRPFLWVMKESE 528
>gb|CA923539.1|CA923539 MTU7CL.P11.G02 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 706
Score = 116 bits (247), Expect(3) = 7e-043
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = +2 / -2
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
E G++V +C QLEVLAH+A GCF+THCGWNST+E + GVPMV + + ADQP AK+VE
Sbjct: 477 ETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPMVCVTERADQPMNAKFVED 298
Query: 296 AWGIGVRMRK 325
W +GVR +K
Sbjct: 297 VWKVGVRTKK 268
Score = 62.0 bits (129), Expect(3) = 7e-043
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +2 / -2
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
G + R+E+E+CIR M GE RNA +W A+ A+ GG+SD NI EF K L
Sbjct: 258 GIVTREELEKCIRGAMDGESGEEIKRNANKWRELARSAVSAGGTSDMNINEFVVKLL 88
Score = 34.1 bits (68), Expect(3) = 7e-043
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2 / -2
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNE 76
EQ++E+ GL S +PF+WVL+ +E
Sbjct: 588 EQVEEIAWGLKASNRPFLWVLKESE 514
>gb|DN488227.1|DN488227 R042F04.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R042F04 3', mRNA sequence
Length = 765
Score = 137 bits (294), Expect(2) = 1e-041
Identities = 52/107 (48%), Positives = 74/107 (69%)
Frame = +2 / -3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
+Q++E+ GL S PF+WV+ +E K+ + +GL+V + PQ++VLA+K GC
Sbjct: 727 KQMEEIAWGLKRSNFPFLWVVMDSEKGKIPEGFVEEVENKGLVVNWSPQVKVLANKVVGC 548
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
F THCGWNSTIE+++ GVPMV MP W+DQ T +K VE AW +GVR +
Sbjct: 547 FFTHCGWNSTIEALSLGVPMVTMPGWSDQQTNSKLVEDAWKVGVRAK 407
Score = 51.9 bits (107), Expect(2) = 1e-041
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2 / -3
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNI 472
G + R+E+ CI+EVM G+R N+ +W A EA EGG+SD NI
Sbjct: 394 GIVKREEIAICIKEVMEGDRGREMKMNSKKWKELAIEATSEGGTSDTNI 248
>gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_H12 3', mRNA sequence
Length = 887
Score = 132 bits (282), Expect(2) = 7e-041
Identities = 51/107 (47%), Positives = 73/107 (68%)
Frame = +2 / -1
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
+Q+ E+ GL S F+WV+ +E K+ + +GL+V + PQ++VLA++A GC
Sbjct: 662 KQMKEIAWGLKRSNFHFLWVVMDSEKGKIPEGFVEEVENKGLVVNWSPQVKVLANEAVGC 483
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
F THCGWNSTIE+++ GVPMV MP W+DQ T +K VE AW +GVR +
Sbjct: 482 FFTHCGWNSTIEALSLGVPMVTMPGWSDQQTNSKLVEDAWKVGVRAK 342
Score = 55.1 bits (114), Expect(2) = 7e-041
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +2 / -1
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAA 487
G + R+E+ CI+EVM G+R N+ +W A EA EGG+SD NI E A
Sbjct: 329 GIVKREEIAICIKEVMEGDRGREMKMNSKKWKELAIEAASEGGTSDTNINELVA 168
>gb|DN491046.1|DN491046 UM56TC12.3pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM56TC12 3', mRNA sequence
Length = 726
Score = 118 bits (253), Expect(2) = 4e-040
Identities = 41/69 (59%), Positives = 56/69 (81%)
Frame = +2 / -1
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
E+G +V + PQ+ +LA++A GCFLTHCGWNSTIE+++ G+PMVAMPQW DQP AK VE
Sbjct: 630 EKGCVVGWSPQVRMLANEAVGCFLTHCGWNSTIEALSLGMPMVAMPQWTDQPPNAKLVED 451
Query: 296 AWGIGVRMR 322
W +G+R++
Sbjct: 450 VWKVGIRVK 424
Score = 73.9 bits (155), Expect(2) = 1e-020
Identities = 35/59 (59%), Positives = 37/59 (62%)
Frame = -3 / +2
Query: 291 STYLAVVGWSAHWGIATIGTPLAMDSIVEFHPQCVRKQPVALCASTSS*GQKGTMRPLS 115
ST LA GWS H GIATIG P SIVEF PQCVRK P A AS +*G T +P S
Sbjct: 455 STSLAFGGWSVHCGIATIGMPRLNASIVEFQPQCVRKHPTASFASILT*GLHPTTQPFS 631
Score = 65.7 bits (137), Expect(2) = 4e-040
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +2 / -1
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
+G + R E+E C++EVM GE+ +NA +W A EA+ EGGSSDKNI E K L
Sbjct: 414 EGIVPRDEIECCVKEVMEGEKGEEMKKNAKKWRELAIEAVSEGGSSDKNIDELVFKIL 241
Score = 45.5 bits (93), Expect(2) = 1e-020
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = -3 / +2
Query: 495 KYLAANSAMFLSELPPSCMASLALCIQRAAFLPYTCFLSPPITSLMHLSTSFLTKEP 325
+ L NS+MFLSE PPS AS+A + AF + SP ITSL S S L P
Sbjct: 242 RILNTNSSMFLSEEPPSLTASIANSLHFLAFFFISSPFSPSITSLTQHSISSLGTIP 412
>gb|CV257070.1|CV257070 WS0245.B21_J10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_J10 3', mRNA sequence
Length = 809
Score = 129 bits (277), Expect(2) = 6e-040
Identities = 50/107 (46%), Positives = 73/107 (68%)
Frame = +2 / -1
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
+Q++E+ GL S F+WV+ +E K+ + +GL+V + PQ++VLA++A C
Sbjct: 620 KQMEEIAWGLKRSNFHFLWVVMDSEKGKIPEGFVEEVENKGLVVNWSPQVKVLANEAVRC 441
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
F THCGWNSTIE+++ GVPMV MP W+DQ T +K VE AW +GVR +
Sbjct: 440 FFTHCGWNSTIEALSLGVPMVTMPGWSDQQTNSKLVEDAWKVGVRAK 300
Score = 54.2 bits (112), Expect(2) = 6e-040
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +2 / -1
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAA 487
G + R+E+ CI+EVM G R N+ +W A EA EGG+SD NI E A
Sbjct: 287 GIVKREEIAICIKEVMEGNRGREMKMNSKKWKELAIEATSEGGTSDTNINELVA 126
>gb|CV254856.1|CV254856 WS02411.B21_G05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_G05 3', mRNA sequence
Length = 902
Score = 123 bits (263), Expect(3) = 1e-038
Identities = 48/85 (56%), Positives = 59/85 (69%)
Frame = +2 / -3
Query: 65 RSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMV 244
R E E+ +++G IVP+C Q+EVL+H + GCF+THCGWNST ES+ASGVPMV
Sbjct: 681 RGEEKEEDKLSCKEELEKQGKIVPWCSQVEVLSHPSIGCFVTHCGWNSTFESLASGVPMV 502
Query: 245 AMPQWADQPTTAKYVESAWGIGVRM 319
A PQW DQ T AK VE W GVR+
Sbjct: 501 AFPQWTDQLTNAKMVEDVWKTGVRV 427
Score = 39.6 bits (80), Expect(3) = 1e-038
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2 / -3
Query: 374 GGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
GGER + +NA +W A+++ +EGGSS N+ F
Sbjct: 357 GGERGNEMRKNAKKWKELARQSSKEGGSSYNNLKAF 250
Score = 35.0 bits (70), Expect(3) = 1e-038
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2 / -3
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEK 85
Q +E+ L ++G+PF+WV+R++ E+
Sbjct: 750 QKEEMARALLETGRPFLWVIRADRGEE 670
>gb|DT513869.1|DT513869 WS02423.B21_D17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_D17 3', mRNA sequence
Length = 861
Score = 123 bits (263), Expect(3) = 1e-038
Identities = 48/85 (56%), Positives = 59/85 (69%)
Frame = +2 / -1
Query: 65 RSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMV 244
R E E+ +++G IVP+C Q+EVL+H + GCF+THCGWNST ES+ASGVPMV
Sbjct: 678 RGEEKEEDKLSCKEELEKQGKIVPWCSQVEVLSHPSIGCFVTHCGWNSTFESLASGVPMV 499
Query: 245 AMPQWADQPTTAKYVESAWGIGVRM 319
A PQW DQ T AK VE W GVR+
Sbjct: 498 AFPQWTDQLTNAKMVEDVWKTGVRV 424
Score = 39.6 bits (80), Expect(3) = 1e-038
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2 / -1
Query: 374 GGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
GGER + +NA +W A+++ +EGGSS N+ F
Sbjct: 354 GGERGNEMRKNAKKWKELARQSSKEGGSSYNNLKAF 247
Score = 35.0 bits (70), Expect(3) = 1e-038
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2 / -1
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEK 85
Q +E+ L ++G+PF+WV+R++ E+
Sbjct: 747 QKEEMARALLETGRPFLWVIRADRGEE 667
>gb|CX658054.1|CX658054 PO01008G05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01008G05 5', mRNA sequence
Length = 575
Score = 116 bits (247), Expect(2) = 2e-038
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = +2 / +3
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
E G++V +C QLEVLAH+A GCF+THCGWNST+E + GVPMV + + ADQP AK+VE
Sbjct: 6 ETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPMVCVTERADQPMNAKFVED 185
Query: 296 AWGIGVRMRK 325
W +GVR +K
Sbjct: 186 VWKVGVRTKK 215
Score = 62.9 bits (131), Expect(2) = 2e-038
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +2 / +3
Query: 326 GSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
G + R+E+E+CIR M GE RNA RW A+ A+ GG+SD NI EF K L
Sbjct: 225 GIVTREELEKCIRGAMDGESGEEIKRNANRWRELARSAVSVGGTSDMNINEFVVKLL 395
>gb|CV243415.1|CV243415 WS02518.B21_N01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02518_N01 3', mRNA sequence
Length = 912
Score = 118 bits (252), Expect(3) = 1e-037
Identities = 43/82 (52%), Positives = 60/82 (73%)
Frame = +2 / -1
Query: 74 EAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMP 253
E ++LS +++G++VP+C Q+EVL+H + GCF+THCGWNST+ES+ SGVP+VA P
Sbjct: 579 EDDQLSACREAILEKQGMVVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVSGVPVVAFP 400
Query: 254 QWADQPTTAKYVESAWGIGVRM 319
W DQ T AK +E W GVR+
Sbjct: 399 HWTDQGTNAKLIEDVWKTGVRV 334
Score = 38.2 bits (77), Expect(3) = 1e-037
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 377 GERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
G+ + +NA +W A +A+++GGSSDKN+ F
Sbjct: 264 GKTGEDFRKNAKKWKDLALDAVKDGGSSDKNLKAF 160
Score = 37.7 bits (76), Expect(3) = 1e-037
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2 / -1
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQ 97
Q++E+ GL SG PF+WV+R + +K ++
Sbjct: 672 QMEEISRGLVQSGLPFLWVVRDEQNKKKEKE 580
>gb|DN488765.1|DN488765 S031D05.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S031D05 3', mRNA sequence
Length = 705
Score = 118 bits (252), Expect(3) = 6e-037
Identities = 43/82 (52%), Positives = 60/82 (73%)
Frame = +2 / -1
Query: 74 EAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMP 253
E ++LS +++G++VP+C Q+EVL+H + GCF+THCGWNST+ES+ SGVP+VA P
Sbjct: 588 EDDQLSACREAILEKQGMVVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVSGVPVVAFP 409
Query: 254 QWADQPTTAKYVESAWGIGVRM 319
W DQ T AK +E W GVR+
Sbjct: 408 HWTDQGTNAKLIEDVWKTGVRV 343
Score = 37.7 bits (76), Expect(3) = 6e-037
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2 / -1
Query: 401 RNAARWMHKAKEAMQEGGSSDKNIAEF 481
+NA +W A +A+++GGSSDKN+ F
Sbjct: 249 KNAKKWKDLAMDAVKDGGSSDKNLKAF 169
Score = 35.9 bits (72), Expect(3) = 6e-037
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2 / -1
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQ 97
Q++E+ GL SG PF+WV+R + +K ++
Sbjct: 681 QMEEIFRGLVQSGLPFLWVIRDAQNKKKEKE 589
>gb|DV466266.1|DV466266 MTUNUL1.P49.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 840
Score = 116 bits (247), Expect(3) = 1e-034
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +2 / +1
Query: 74 EAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMP 253
E ++LS +++G++VP+C Q+EVL+H + GCF+THCGWNST+ES+ SG+P+VA P
Sbjct: 439 EDDQLSACREAILEKQGMVVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVSGIPVVAFP 618
Query: 254 QWADQPTTAKYVESAWGIGVRM 319
W DQ T K +E W GVR+
Sbjct: 619 HWTDQGTNTKLIEDVWKTGVRV 684
Score = 37.7 bits (76), Expect(3) = 1e-034
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2 / +1
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQ 97
Q++E+ GL SG PF+WV+R + +K ++
Sbjct: 346 QMEEISRGLVQSGLPFLWVVRDEQNKKKEKE 438
Score = 30.4 bits (60), Expect(3) = 1e-034
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2 / +1
Query: 377 GERKHVYGRNAARWMHKAKEAMQEGGSSD 463
G+ + +NA +W A +A+++GGSSD
Sbjct: 754 GKTGEDFRKNAKKWKDLALDAVKDGGSSD 840
>gb|DT504462.1|DT504462 WS01313.B21_H10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_H10 3', mRNA sequence
Length = 903
Score = 108 bits (231), Expect(3) = 2e-034
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = +2 / -3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
+ +G+IVP+C Q+EVL+H + GCF+THCGWNST+ES+ VP+VA P W DQ T AK +
Sbjct: 619 ERQGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIA 440
Query: 293 SAWGIGVRM 319
W GVR+
Sbjct: 439 DVWKTGVRV 413
Score = 40.5 bits (82), Expect(3) = 2e-034
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2 / -3
Query: 401 RNAARWMHKAKEAMQEGGSSDKNIAEF 481
+NA +W A++A++EGGSSDKN+ F
Sbjct: 319 KNAKKWKDLARDAVKEGGSSDKNLKAF 239
Score = 34.5 bits (69), Expect(3) = 2e-034
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2 / -3
Query: 5 QLDELGNGLCDSGKPFVWVLRSNE 76
Q++E+ GL DSG F+WV+R +
Sbjct: 766 QIEEIARGLVDSGLTFLWVIRDEQ 695
>gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_J17 3', mRNA sequence
Length = 777
Score = 97.7 bits (207), Expect(3) = 2e-032
Identities = 38/69 (55%), Positives = 47/69 (68%)
Frame = +2 / -3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
K+RG I +CPQ EVL H + G FLTHCGW S IESI+SGVPM+ P DQ T +Y
Sbjct: 517 KDRGFICSWCPQEEVLNHPSVGGFLTHCGWTSIIESISSGVPMLCWPFAGDQQTNCRYTC 338
Query: 293 SAWGIGVRM 319
+ WGIG+ +
Sbjct: 337 TEWGIGMEI 311
Score = 44.1 bits (90), Expect(3) = 2e-032
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2 / -3
Query: 329 SLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
++ R +VE+ +RE M GE+ + A W A+EA GGSS N+ + + L
Sbjct: 304 NVTRDKVEKIVREFMEGEKAKEMKKKAMEWKKLAEEATGPGGSSSMNLDKLVTEVL 137
Score = 35.0 bits (70), Expect(3) = 2e-032
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2 / -3
Query: 2 EQLDELGNGLCDSGKPFVWVLR 67
+QL E G GL SG PF+W++R
Sbjct: 640 QQLIEFGMGLAKSGHPFLWIIR 575
>gb|CV244301.1|CV244301 WS0254.B21_E14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0254_E14 3', mRNA sequence
Length = 862
Score = 138 bits (297), Expect = 2e-032
Identities = 62/160 (38%), Positives = 85/160 (53%)
Frame = +2 / -3
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
+L L L SG PF+W L+ N L R +GL+VP+ PQ+EVLAHKA G F
Sbjct: 575 ELVALAEALETSGVPFIWSLKDNSKVHLPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVF 396
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCIR 364
+THCGWNS +ESIA GVPM+ P + DQ + VE AW IG+++ G + V +
Sbjct: 395 ITHCGWNSLLESIAGGVPMICRPFFGDQRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLD 216
Query: 365 EVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFA 484
+V+ + N AK+A+ GSS N +
Sbjct: 215 KVLSQDSGEEMRENIRALQQLAKKAIGPNGSSINNFVSLS 96
>gb|CV245380.1|CV245380 WS0257.B21_E04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0257_E04 3', mRNA sequence
Length = 835
Score = 138 bits (297), Expect = 2e-032
Identities = 62/160 (38%), Positives = 85/160 (53%)
Frame = +2 / -3
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
+L L L SG PF+W L+ N L R +GL+VP+ PQ+EVLAHKA G F
Sbjct: 575 ELVALAEALETSGVPFIWSLKDNSKVHLPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVF 396
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCIR 364
+THCGWNS +ESIA GVPM+ P + DQ + VE AW IG+++ G + V +
Sbjct: 395 ITHCGWNSLLESIAGGVPMICRPFFGDQRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLD 216
Query: 365 EVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFA 484
+V+ + N AK+A+ GSS N +
Sbjct: 215 KVLSQDSGEEMRENIRALQQLAKKAIGPNGSSINNFVSLS 96
>gb|DT489381.1|DT489381 WS02542.B21_B04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_B04 3', mRNA sequence
Length = 937
Score = 138 bits (297), Expect = 2e-032
Identities = 62/160 (38%), Positives = 85/160 (53%)
Frame = +2 / -3
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
+L L L SG PF+W L+ N L R +GL+VP+ PQ+EVLAHKA G F
Sbjct: 575 ELVALAEALETSGVPFIWSLKDNSKVHLPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVF 396
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCIR 364
+THCGWNS +ESIA GVPM+ P + DQ + VE AW IG+++ G + V +
Sbjct: 395 ITHCGWNSLLESIAGGVPMICRPFFGDQRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLD 216
Query: 365 EVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFA 484
+V+ + N AK+A+ GSS N +
Sbjct: 215 KVLSQDSGEEMRENIRALQQLAKKAIGPNGSSINNFVSLS 96
>gb|DT492065.1|DT492065 WS02549.C21_J03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02549_J03 3', mRNA sequence
Length = 844
Score = 138 bits (297), Expect = 2e-032
Identities = 62/160 (38%), Positives = 85/160 (53%)
Frame = +2 / -3
Query: 5 QLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCF 184
+L L L SG PF+W L+ N L R +GL+VP+ PQ+EVLAHKA G F
Sbjct: 575 ELVALAEALETSGVPFIWSLKDNSKVHLPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVF 396
Query: 185 LTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCIR 364
+THCGWNS +ESIA GVPM+ P + DQ + VE AW IG+++ G + V +
Sbjct: 395 ITHCGWNSLLESIAGGVPMICRPFFGDQRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLD 216
Query: 365 EVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFA 484
+V+ + N AK+A+ GSS N +
Sbjct: 215 KVLSQDSGEEMRENIRALQQLAKKAIGPNGSSINNFVSLS 96
>gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 903
Score = 109 bits (232), Expect(2) = 5e-032
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2 / +2
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
+RG +V + PQ +VLAH + CF+THCGWNS++E++ SG+P+VA PQW DQ T AKY+
Sbjct: 518 DRGKVVQWSPQEKVLAHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAKYLVD 697
Query: 296 AWGIGVRMRKGSLVRKEVER 355
+GVRM +G K + R
Sbjct: 698 ILKVGVRMSRGEAENKLITR 757
Score = 48.3 bits (99), Expect(2) = 5e-032
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2 / +2
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+ R E+E+C+ E G + +NA +W A A+ EGGSSD NI F
Sbjct: 749 ITRDEIEKCLLEATVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDWNIRSF 898
>gb|CV240642.1|CV240642 WS0251.B21_P03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_P03 3', mRNA sequence
Length = 845
Score = 96.4 bits (204), Expect(3) = 6e-032
Identities = 37/69 (53%), Positives = 47/69 (68%)
Frame = +2 / -2
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
K+R I +CPQ EVL H + G FLTHCGW STIESI+SGVPM+ P + DQ T +Y
Sbjct: 619 KDRCFISSWCPQEEVLDHPSVGGFLTHCGWGSTIESISSGVPMLCWPSFGDQQTNCRYAC 440
Query: 293 SAWGIGVRM 319
+ W IG+ +
Sbjct: 439 NEWAIGMEI 413
Score = 42.8 bits (87), Expect(3) = 6e-032
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2 / -2
Query: 329 SLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
++ R+ VE+ +RE+M GE + A W A+EA GGSS N+ + L
Sbjct: 406 NVTRENVEKQVRELMEGEEGKKMKKKAMEWKKLAEEATGPGGSSSMNLDRLVTEVL 239
Score = 35.9 bits (72), Expect(3) = 6e-032
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 2 EQLDELGNGLCDSGKPFVWVLR 67
+QL E G GL SG PF+W++R
Sbjct: 742 QQLIEFGTGLAKSGHPFLWIIR 677
>gb|CV283422.1|CV283422 WS0187.B21_E19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0187_E19 3', mRNA sequence
Length = 783
Score = 107 bits (228), Expect(2) = 9e-032
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +2 / -3
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
+RG +V + PQ +VL H + CF+THCGWNS++E++ SG+P+VA PQW DQ T AKY+
Sbjct: 703 DRGRVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAKYLVD 524
Query: 296 AWGIGVRMRKGSLVRKEVER 355
+GVRM +G K + R
Sbjct: 523 ILKVGVRMSRGEAENKLITR 464
Score = 49.2 bits (101), Expect(2) = 9e-032
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2 / -3
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFA 484
+ R E+E+C+ E G + +NA +W A A+ EGGSSD NI F+
Sbjct: 472 ITRDEIEKCLLEAAVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDLNIRSFS 320
>gb|BU837200.1|BU837200 T095H09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 718
Score = 110 bits (234), Expect(2) = 9e-032
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +2 / +3
Query: 104 GRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAK 283
G RG +V + PQ +VLAH + CF+THCGWNST+E++ SG+P+ A PQW DQ T AK
Sbjct: 36 GEAGNRGRVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVAAFPQWGDQVTNAK 215
Query: 284 YVESAWGIGVRMRKGSLVRKEVER 355
Y+ +GVRM +G K + R
Sbjct: 216 YLVDILKVGVRMSRGEAENKLITR 287
Score = 46.4 bits (95), Expect(2) = 9e-032
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2 / +3
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+ R E+E+C+ E G + A +W A+ A+ EGGSSD NI F
Sbjct: 279 ITRDEIEKCLLEATAGPKAVEMKEKAMKWKEAAEAAVAEGGSSDWNIRYF 428
>gb|CV243768.1|CV243768 WS0252.B21_M19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0252_M19 3', mRNA sequence
Length = 908
Score = 107 bits (228), Expect(2) = 2e-031
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +2 / -1
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
+RG +V + PQ +VL H + CF+THCGWNS++E++ SG+P+VA PQW DQ T AKY+
Sbjct: 743 DRGKVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAKYLVD 564
Query: 296 AWGIGVRMRKGSLVRKEVER 355
+GVRM +G K + R
Sbjct: 563 ILKVGVRMSRGEAENKLITR 504
Score = 48.3 bits (99), Expect(2) = 2e-031
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2 / -1
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+ R E+E+C+ E G + +NA +W A A+ EGGSSD NI F
Sbjct: 512 ITRDEIEKCLLEATVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDWNIRSF 363
>gb|DT491072.1|DT491072 WS02546.C21.1_L18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02546_L18 3', mRNA sequence
Length = 882
Score = 107 bits (228), Expect(2) = 2e-031
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +2 / -1
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
+RG +V + PQ +VL H + CF+THCGWNS++E++ SG+P+VA PQW DQ T AKY+
Sbjct: 750 DRGKVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAKYLVD 571
Query: 296 AWGIGVRMRKGSLVRKEVER 355
+GVRM +G K + R
Sbjct: 570 ILKVGVRMSRGEAENKLITR 511
Score = 48.3 bits (99), Expect(2) = 2e-031
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2 / -1
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+ R E+E+C+ E G + +NA +W A A+ EGGSSD NI F
Sbjct: 519 ITRDEIEKCLLEATVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDWNIRSF 370
>gb|DT505915.1|DT505915 WS01812.C21_D06 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01812_D06 3', mRNA sequence
Length = 867
Score = 107 bits (228), Expect(2) = 2e-031
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +2 / -3
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
+RG +V + PQ +VL H + CF+THCGWNS++E++ SG+P+VA PQW DQ T AKY+
Sbjct: 697 DRGKVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAKYLVD 518
Query: 296 AWGIGVRMRKGSLVRKEVER 355
+GVRM +G K + R
Sbjct: 517 ILKVGVRMSRGEAENKLITR 458
Score = 48.3 bits (99), Expect(2) = 2e-031
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2 / -3
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+ R E+E+C+ E G + +NA +W A A+ EGGSSD NI F
Sbjct: 466 ITRDEIEKCLLEATVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDWNIRSF 317
>gb|CK100898.1|CK100898 F007P86.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F007P86 5', mRNA sequence
Length = 624
Score = 135 bits (290), Expect = 2e-031
Identities = 57/144 (39%), Positives = 79/144 (54%)
Frame = +2 / -3
Query: 38 SGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIE 217
S PF+W L+ N L R +GL+VP+ PQLEVLAH+A G F+THCGWNS +E
Sbjct: 559 SETPFIWSLKDNSKVHLPHGFLDRTTSQGLVVPWSPQLEVLAHRAVGVFVTHCGWNSLLE 380
Query: 218 SIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCIREVMGGERKHVY 397
SIA GVPM+ P + DQ + +E W IG+++ G + EV + +++ E
Sbjct: 379 SIAGGVPMICRPFFGDQRLNGRMIEDVWEIGLKVEDGVFTKLEVLNSLNKILSHEGGQKM 200
Query: 398 GRNAARWMHKAKEAMQEGGSSDKN 469
N AK+A+ GSS N
Sbjct: 199 RENIRALKQLAKKAIGPNGSSINN 128
>gb|CF119369.1|CF119369 MTU10CS.P16.H11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 698
Score = 105 bits (225), Expect(2) = 4e-031
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2 / +3
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
+RG +V + PQ +VLAH + CF+THCGWNST+E++ SG+P+VA PQ DQ T AKY+
Sbjct: 144 DRGNVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVAFPQLGDQVTNAKYLVD 323
Query: 296 AWGIGVRMRKGSLVRKEVER 355
+ +GVRM +G K + R
Sbjct: 324 IFKVGVRMSRGKAENKLITR 383
Score = 48.3 bits (99), Expect(2) = 4e-031
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2 / +3
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+ R E+E+C+ E G + NA +W A+ A+ EGGSSD N+ F
Sbjct: 375 ITRDEIEKCLLEATAGPKAVEMKENAMKWKEAAEAAVAEGGSSDWNLRYF 524
>gb|CF119771.1|CF119771 MTU10CS.P6.B05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 612
Score = 105 bits (225), Expect(2) = 4e-031
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2 / -1
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
+RG +V + PQ +VLAH + CF+THCGWNST+E++ SG+P+VA PQ DQ T AKY+
Sbjct: 555 DRGNVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVAFPQLGDQVTNAKYLVD 376
Query: 296 AWGIGVRMRKGSLVRKEVER 355
+ +GVRM +G K + R
Sbjct: 375 IFKVGVRMSRGKAENKLITR 316
Score = 48.3 bits (99), Expect(2) = 4e-031
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2 / -1
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+ R E+E+C+ E G + NA +W A+ A+ EGGSSD N+ F
Sbjct: 324 ITRDEIEKCLLEATAGPKAVEMKENAMKWKEAAEAAVAEGGSSDWNLRYF 175
>gb|BU891342.1|BU891342 P048H10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 532
Score = 133 bits (285), Expect = 9e-031
Identities = 59/144 (40%), Positives = 79/144 (54%)
Frame = +2 / +2
Query: 38 SGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIE 217
SG PF+W L+ N L R +GL+VP+ PQ EVLAHKA G F+THCGWNS +E
Sbjct: 11 SGVPFIWSLKDNSKVHLPDGFLDRTTSQGLLVPWTPQSEVLAHKAVGVFITHCGWNSLLE 190
Query: 218 SIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCIREVMGGERKHVY 397
SIA GVPM+ P + DQ + VE AW IG+++ G + V + +V+ +
Sbjct: 191 SIAGGVPMICRPFFGDQRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLDKVLSQDSGEKM 370
Query: 398 GRNAARWMHKAKEAMQEGGSSDKN 469
N AK+A+ GSS N
Sbjct: 371 RENIRALQQLAKKAIGPNGSSINN 442
>gb|CN520132.1|CN520132 GQ0106.B3_K07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0106_K07 5', mRNA sequence
Length = 817
Score = 133 bits (285), Expect = 9e-031
Identities = 56/156 (35%), Positives = 87/156 (55%)
Frame = +2 / +3
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
++L EL L + PF+W R N E+L + R KE+G +V + PQL+VL HKA G
Sbjct: 231 QELAELVEALKECKLPFLWSFRGNPKEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGV 410
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCI 361
F+TH GWNS ++SIA VPM+ P + DQ + +E+ WG G+ + G + + + + +
Sbjct: 411 FVTHSGWNSVLDSIAGCVPMICRPFFGDQTVNTRTIEAVWGTGLEIEGGRITKGGLMKAL 590
Query: 362 REVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKN 469
R +M + + + A +A+Q GSS KN
Sbjct: 591 RLIMSTDEGNKMRKKLQHLQGLALDAVQSSGSSTKN 698
>gb|CV236341.1|CV236341 WS01223.B21_M04 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_M04 3', mRNA sequence
Length = 838
Score = 133 bits (285), Expect = 9e-031
Identities = 56/156 (35%), Positives = 87/156 (55%)
Frame = +2 / -1
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
++L EL L + PF+W R N E+L + R KE+G +V + PQL+VL HKA G
Sbjct: 757 QELAELVEALKECKLPFLWSFRGNPKEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGV 578
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCI 361
F+TH GWNS ++SIA VPM+ P + DQ + +E+ WG G+ + G + + + + +
Sbjct: 577 FVTHSGWNSVLDSIAGCVPMICRPFFGDQTVNTRTIEAVWGTGLEIEGGRITKGGLMKAL 398
Query: 362 REVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKN 469
R +M + + + A +A+Q GSS KN
Sbjct: 397 RLIMSTDEGNKMRKKLQHLQGLALDAVQSSGSSTKN 290
>gb|CV282585.1|CV282585 WS0185.B21_A14 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0185_A14 3', mRNA sequence
Length = 848
Score = 133 bits (285), Expect = 9e-031
Identities = 56/156 (35%), Positives = 87/156 (55%)
Frame = +2 / -1
Query: 2 EQLDELGNGLCDSGKPFVWVLRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGC 181
++L EL L + PF+W R N E+L + R KE+G +V + PQL+VL HKA G
Sbjct: 764 QELAELVEALKECKLPFLWSFRGNPKEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGV 585
Query: 182 FLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSLVRKEVERCI 361
F+TH GWNS ++SIA VPM+ P + DQ + +E+ WG G+ + G + + + + +
Sbjct: 584 FVTHSGWNSVLDSIAGCVPMICRPFFGDQTVNTRTIEAVWGTGLEIEGGRITKGGLMKAL 405
Query: 362 REVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKN 469
R +M + + + A +A+Q GSS KN
Sbjct: 404 RLIMSTDEGNKMRKKLQHLQGLALDAVQSSGSSTKN 297
>gb|CA933833.1|CA933833 MTU3TS.P13.C08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 691
Score = 105 bits (224), Expect(2) = 2e-030
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2 / -2
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
+RG +V + PQ +VLAH + CF+THCGWNST+E++ SG+P+VA PQ DQ T AKY+
Sbjct: 558 DRGNVVRWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVAFPQLGDQVTNAKYLVD 379
Query: 296 AWGIGVRMRKGSLVRKEVER 355
+ +GVRM +G K + R
Sbjct: 378 IFKVGVRMSRGKAENKLITR 319
Score = 46.4 bits (95), Expect(2) = 2e-030
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2 / -2
Query: 344 EVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
E+E+C+ E G + NA +W A+ A+ EGGSSD NI F
Sbjct: 312 EIEKCLLEATAGPKAVEMKENAMKWREAAEAAVAEGGSSDWNIRYF 175
>gb|CX178075.1|CX178075 G12_45-100_14.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 653
Score = 92.3 bits (195), Expect(3) = 7e-030
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +2 / +1
Query: 74 EAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMP 253
EA L + K+R L+V +CPQ +VL H + G FL+H GWNST+ESI GVPMV P
Sbjct: 202 EAAMLPPEFLSETKDRSLLVSWCPQEQVLKHPSIGGFLSHMGWNSTLESICGGVPMVCWP 381
Query: 254 QWADQPTTAKYVESAWGIGVRM 319
+ +Q T + + WGIG+ +
Sbjct: 382 FFGEQQTNCWFACTKWGIGMEI 447
Score = 44.6 bits (91), Expect(3) = 7e-030
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 323 KGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNI 472
+ ++ R EVE+ +RE+M GE+ R A W KA+EA G +S +N+
Sbjct: 448 ENNVKRDEVEKLVRELMEGEKGKDMKRKAMEWKTKAEEAAWTGDASHRNL 597
Score = 31.3 bits (62), Expect(3) = 7e-030
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2 / +1
Query: 2 EQLDELGNGLCDSGKPFVWVLR 67
+Q+ E GL +S KPF+W++R
Sbjct: 118 QQMIEFAWGLANSNKPFLWIIR 183
>gb|DT487894.1|DT487894 WS02534.B21_P09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02534_P09 3', mRNA sequence
Length = 712
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = +2 / -3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
+ +G+IVP+C Q+EVL+H + GCF+THCGWNST+ES+ VP+VA P W DQ T AK +
Sbjct: 674 ERQGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIA 495
Query: 293 SAWGIGVRM 319
W GVR+
Sbjct: 494 DVWKTGVRV 468
Score = 40.5 bits (82), Expect(2) = 1e-029
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2 / -3
Query: 401 RNAARWMHKAKEAMQEGGSSDKNIAEF 481
+NA +W A++A++EGGSSDKN+ F
Sbjct: 374 KNAKKWKDLARDAVKEGGSSDKNLKAF 294
>gb|CV279584.1|CV279584 WS0132.B21_G07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0132_G07 3', mRNA sequence
Length = 632
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = +2 / -3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
+ +G+IVP+C Q+EVL+H + GCF+THCGWNST+ES+ VP+VA P W DQ T AK +
Sbjct: 615 ERQGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIA 436
Query: 293 SAWGIGVRM 319
W GVR+
Sbjct: 435 DVWKTGVRV 409
Score = 40.5 bits (82), Expect(2) = 1e-029
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2 / -3
Query: 401 RNAARWMHKAKEAMQEGGSSDKNIAEF 481
+NA +W A++A++EGGSSDKN+ F
Sbjct: 315 KNAKKWKDLARDAVKEGGSSDKNLKAF 235
>gb|CV279650.1|CV279650 WS0132.B21_L13 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0132_L13 3', mRNA sequence
Length = 627
Score = 108 bits (231), Expect(2) = 1e-029
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = +2 / -1
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
+ +G+IVP+C Q+EVL+H + GCF+THCGWNST+ES+ VP+VA P W DQ T AK +
Sbjct: 612 ERQGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIA 433
Query: 293 SAWGIGVRM 319
W GVR+
Sbjct: 432 DVWKTGVRV 406
Score = 40.5 bits (82), Expect(2) = 1e-029
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 401 RNAARWMHKAKEAMQEGGSSDKNIAEF 481
+NA +W A++A++EGGSSDKN+ F
Sbjct: 312 KNAKKWKDLARDAVKEGGSSDKNLKAF 232
>gb|DN490532.1|DN490532 UL60PB12.3pR Populus cold stressed leaves cDNA library Populus
tremula x Populus tremuloides cDNA clone UL60PB12 3',
mRNA sequence
Length = 612
Score = 95.5 bits (202), Expect(3) = 8e-029
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = +2 / -3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
K+RG I +CPQ EVL H + G FLTH GWNS ESI+SGVPM+ +P + DQ T +Y
Sbjct: 427 KDRGFISNWCPQEEVLNHPSIGGFLTHSGWNSIAESISSGVPMLCLPFFGDQQTNCRYTC 248
Query: 293 SAWGIGVRM 319
+ WGIG+ +
Sbjct: 247 NEWGIGMEI 221
Score = 38.6 bits (78), Expect(3) = 8e-029
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2 / -3
Query: 338 RKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
R ++E+ +RE+M GE+ + A W A+EA GSS N+ + + L
Sbjct: 205 RDKMEKLVRELMEGEKGKSMKKKAMEWKKLAEEANGPSGSSSMNLDKLVKEVL 47
Score = 30.4 bits (60), Expect(3) = 8e-029
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2 / -3
Query: 2 EQLDELGNGLCDSGKPFVWVLR 67
+ L ELG GL S PF+W++R
Sbjct: 550 QHLIELGMGLAKSVHPFLWIIR 485
>gb|DT518857.1|DT518857 WS02439.B21_H24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02439_H24 3', mRNA sequence
Length = 439
Score = 81.3 bits (171), Expect(2) = 6e-028
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +2 / +2
Query: 320 RKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYLP 499
+KG + ++EVE CIREVM GER RN+ +WM AK A+ EGGSSDKNI EFAA+
Sbjct: 110 KKGIVTKEEVEGCIREVMEGERGSEMRRNSEKWMKLAKTAVDEGGSSDKNITEFAAELAR 289
Query: 500 K 502
K
Sbjct: 290 K 292
Score = 62.5 bits (130), Expect(2) = 6e-028
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +2 / +2
Query: 221 IASGVPMVAMPQWADQPTTAKYVESAWGIGVRMR 322
++ GVPMVAMPQW DQPT AKY+ W +GVR++
Sbjct: 2 LSLGVPMVAMPQWTDQPTNAKYIADVWHVGVRVK 103
>gb|CV249527.1|CV249527 WS01124.B21_H12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_H12 3', mRNA sequence
Length = 696
Score = 95.0 bits (201), Expect(2) = 8e-028
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +2 / -1
Query: 155 VLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVESAWGIGVRMRKGSL 334
VL H + CF+THCGWNS++E++ SG+P+VA PQW DQ T AKY+ +GVRM +G
Sbjct: 696 VLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAKYLVDILKVGVRMSRGEA 517
Query: 335 VRKEVER 355
K + R
Sbjct: 516 ENKLITR 496
Score = 48.3 bits (99), Expect(2) = 8e-028
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2 / -1
Query: 332 LVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEF 481
+ R E+E+C+ E G + +NA +W A A+ EGGSSD NI F
Sbjct: 504 ITRDEIEKCLLEATVGPKAVEMKQNAMKWKEAAAAAVAEGGSSDWNIRSF 355
>gb|AJ774738.1|AJ774738 AJ774738 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300023G03F1, mRNA sequence
Length = 670
Score = 116 bits (248), Expect(2) = 1e-027
Identities = 50/115 (43%), Positives = 64/115 (55%)
Frame = +2 / +2
Query: 116 ERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVES 295
+RG IV + PQ EVLAH ATG F TH GWNST+ESI GVPM+ P + DQ A+YV
Sbjct: 236 KRGYIVKWAPQQEVLAHPATGGFWTHNGWNSTLESICEGVPMICQPFFGDQRVNARYVSD 415
Query: 296 AWGIGVRMRKGSLVRKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSS 460
W IG + L R+E+ER I+ +M + + K + GGSS
Sbjct: 416 VWKIGTHLEYNKLERREIERAIKALMVETKGQEMRQRIVSLKEKVNLCLSHGGSS 580
Score = 26.3 bits (51), Expect(2) = 1e-027
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 14 ELGNGLCDSGKPFVWVLR 67
E+ GL S +PF+WV+R
Sbjct: 116 EIAWGLLHSNQPFLWVVR 169
>gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_M10 3', mRNA sequence
Length = 887
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +2 / -1
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
KERG I +CPQ EVL+H + G F+THCGW STIESI+SGVPM+ P + DQ T +Y
Sbjct: 614 KERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSFGDQQTNCRYTC 435
Query: 293 SAWGIGVRM 319
+ WGIG+ +
Sbjct: 434 TEWGIGMEI 408
Score = 35.9 bits (72), Expect(2) = 3e-027
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2 / -1
Query: 338 RKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNI 472
R VE+ +RE+M GE+ + W A+EA GSS N+
Sbjct: 392 RDNVEKLVRELMEGEKGKKMKSRSMEWKKLAEEATALNGSSSMNL 258
>gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_G13 3', mRNA sequence
Length = 883
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +2 / -3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
KERG I +CPQ EVL+H + G F+THCGW STIESI+SGVPM+ P + DQ T +Y
Sbjct: 596 KERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSFGDQQTNCRYTC 417
Query: 293 SAWGIGVRM 319
+ WGIG+ +
Sbjct: 416 TEWGIGMEI 390
Score = 35.9 bits (72), Expect(2) = 3e-027
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2 / -3
Query: 338 RKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNI 472
R VE+ +RE+M GE+ + W A+EA GSS N+
Sbjct: 374 RDNVEKLVRELMEGEKGKKMKSRSMEWKKLAEEATALNGSSSMNL 240
>gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_A16 3', mRNA sequence
Length = 879
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +2 / -2
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
KERG I +CPQ EVL+H + G F+THCGW STIESI+SGVPM+ P + DQ T +Y
Sbjct: 614 KERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSFGDQQTNCRYTC 435
Query: 293 SAWGIGVRM 319
+ WGIG+ +
Sbjct: 434 TEWGIGMEI 408
Score = 35.9 bits (72), Expect(2) = 3e-027
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2 / -2
Query: 338 RKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNI 472
R VE+ +RE+M GE+ + W A+EA GSS N+
Sbjct: 392 RDNVEKLVRELMEGEKGKKMKSRSMEWKKLAEEATALNGSSSMNL 258
>gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_F21 3', mRNA sequence
Length = 844
Score = 105 bits (224), Expect(2) = 3e-027
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +2 / -3
Query: 113 KERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPMVAMPQWADQPTTAKYVE 292
KERG I +CPQ EVL+H + G F+THCGW STIESI+SGVPM+ P + DQ T +Y
Sbjct: 614 KERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSFGDQQTNCRYTC 435
Query: 293 SAWGIGVRM 319
+ WGIG+ +
Sbjct: 434 TEWGIGMEI 408
Score = 35.9 bits (72), Expect(2) = 3e-027
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2 / -3
Query: 338 RKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNI 472
R VE+ +RE+M GE+ + W A+EA GSS N+
Sbjct: 392 RDNVEKLVRELMEGEKGKKMKSRSMEWKKLAEEATALNGSSSMNL 258
>gb|CV257201.1|CV257201 WS0245.B21_P10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_P10 3', mRNA sequence
Length = 815
Score = 95.9 bits (203), Expect(2) = 1e-026
Identities = 39/86 (45%), Positives = 54/86 (62%)
Frame = +2 / -2
Query: 62 LRSNEAEKLSRQLGGRCKERGLIVPFCPQLEVLAHKATGCFLTHCGWNSTIESIASGVPM 241
L + ++ L + KERGL +C Q +VL+H + G FLTH GWNSTIESI GVPM
Sbjct: 613 LVAGDSAMLPPEFVSATKERGLFASWCSQEQVLSHPSIGGFLTHNGWNSTIESICGGVPM 434
Query: 242 VAMPQWADQPTTAKYVESAWGIGVRM 319
+ P +A+Q T +Y + WGIG+ +
Sbjct: 433 ICWPFFAEQQTNCRYCCTEWGIGMEI 356
Score = 43.7 bits (89), Expect(2) = 1e-026
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2 / -2
Query: 338 RKEVERCIREVMGGERKHVYGRNAARWMHKAKEAMQEGGSSDKNIAEFAAKYL 496
R EVE +RE+MGGE+ + W A+EA+ GSS N+ + K L
Sbjct: 340 RGEVESLVRELMGGEKGSEMKKKTREWKKMAEEAITSTGSSCMNLDDMINKVL 182
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 305,185,758
Number of Sequences: 369679
Number of extensions: 4279579
Number of successful extensions: 68678
Number of sequences better than 1.0e-020: 120
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 6950794778
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)