TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2763158.2.1
(826 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populu... 90 1e-041
gb|BP932598.1|BP932598 BP932598 full-length enriched poplar... 155 3e-037
gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leave... 148 5e-035
gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library... 95 5e-035
gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid lib... 93 9e-034
gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Popul... 92 2e-033
gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Popu... 92 2e-033
gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus... 92 2e-033
gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA librar... 142 2e-033
gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Po... 90 1e-031
gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated wit... 68 4e-030
gb|BU835778.1|BU835778 T078E10 Populus apical shoot cDNA li... 130 9e-030
gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDN... 70 3e-028
gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA librar... 92 2e-027
gb|BP933409.1|BP933409 BP933409 full-length enriched poplar... 122 4e-027
gb|BI130255.1|BI130255 G102P91Y Populus cambium cDNA librar... 121 7e-027
gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Popu... 99 8e-027
gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus t... 99 8e-027
gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus t... 98 1e-026
gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated wit... 68 2e-026
gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus t... 99 4e-026
gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Popul... 95 1e-025
gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA librar... 93 5e-025
gb|CV273187.1|CV273187 WS0171.B21_P05 PTxD-NR-A-8 Populus t... 90 9e-025
gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichoca... 68 6e-024
gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Po... 100 6e-024
gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Popul... 95 1e-023
gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus t... 95 1e-023
gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus tricho... 110 2e-023
gb|DN498729.1|DN498729 S066G12.5pR Populus imbibed seed cDN... 70 2e-023
gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated wi... 92 1e-022
gb|BU866443.1|BU866443 S066G12 Populus imbibed seed cDNA li... 70 1e-022
gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA libr... 99 2e-022
gb|DN485248.1|DN485248 M122A11.3pR Populus female catkins c... 73 4e-022
gb|CV274297.1|CV274297 WS0172.B21_N05 PTxD-NR-A-8 Populus t... 74 6e-022
gb|CA927840.1|CA927840 MTU6TR.P13.E11 Aspen root cDNA Libra... 90 1e-021
>gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_F08 3', mRNA sequence
Length = 879
Score = 90.4 bits (191), Expect(3) = 1e-041
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +3 / -1
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
+ G L ++ L+D R+ Y + H++ L+ + G V+GYFAWS LD+FEW SGYT R+G
Sbjct: 510 NEGKLTLKQQLNDTMRIDYYRSHLSFLRLAMAEGVKVKGYFAWSFLDDFEWNSGYTVRFG 331
Query: 510 IVYVDRNDGCKRYMKRS 560
I+Y+D +G KR K S
Sbjct: 330 IIYIDYKNGLKRIPKLS 280
Score = 67.0 bits (140), Expect(3) = 1e-041
Identities = 23/49 (46%), Positives = 38/49 (77%)
Frame = +3 / -1
Query: 189 DGNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDH 335
+G IGP G++W+++YP+G++ LL+ K KY +P IYITENG+ +V++
Sbjct: 654 NGVLIGPQAGSTWLHVYPKGIRKLLLYTKKKYNDPVIYITENGVSEVNN 508
Score = 51.0 bits (105), Expect(3) = 1e-041
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3 / -1
Query: 15 ERLPFFTDKEQEKLVGSYDMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQ 173
+RLP FT +E + GS+D +GLNYYT+ +++N+ IS P TD S+
Sbjct: 822 KRLPKFTKEESAFIKGSFDFIGLNYYTAFYAENLPISNISHPSSLTDSLATSR 664
>gb|BP932598.1|BP932598 BP932598 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-038_A02.r 3', mRNA sequence
Length = 644
Score = 155 bits (333), Expect = 3e-037
Identities = 55/122 (45%), Positives = 87/122 (71%)
Frame = +3 / -2
Query: 195 NPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHGDLPMEVALDDHK 374
+PIG +W+++YP+G+ DL++ +++KY NPP+YITENG+ D ++ LP++ AL D
Sbjct: 643 HPIGTPTALNWLFIYPKGIYDLMLYVRDKYKNPPLYITENGLADANNASLPVKEALKDGL 464
Query: 375 RVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYGIVYVDRNDGCKRYMK 554
R+ YL H+ L ++ GANV+GY+ W+ D+FEW +GYT R+G++Y+D + KRYMK
Sbjct: 463 RIRYLASHLQYLSKAIKEGANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDFKNNLKRYMK 284
Query: 555 RS 560
S
Sbjct: 283 YS 278
>gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C092P56 3', mRNA sequence
Length = 543
Score = 148 bits (317), Expect = 5e-035
Identities = 52/113 (46%), Positives = 82/113 (72%)
Frame = +3 / -1
Query: 222 SWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHI 401
+W+++Y +G+ DL++ +++KY NPPIYITENG+ D ++ LP++ AL D R+ YL H+
Sbjct: 531 NWLFIYRKGIYDLMLYVRDKYKNPPIYITENGLADANNASLPVKEALKDGLRIRYLASHL 352
Query: 402 ATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
L ++ GANV+GY+ W+ D+FEW +GYT R+G++Y+D + KRYMK S
Sbjct: 351 QYLSKAIKEGANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDFKNNLKRYMKYS 193
>gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 617
Score = 95.0 bits (201), Expect(3) = 5e-035
Identities = 38/65 (58%), Positives = 46/65 (70%)
Frame = +3 / +3
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+ AL D RV Y + ++ LK++ D GAN+ GYFAWSLLDNFEW SGYT R+G
Sbjct: 324 DPGNFTRSKALHDTTRVGYFKAYLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYTSRFG 503
Query: 510 IVYVD 524
IVYVD
Sbjct: 504 IVYVD 518
Score = 58.3 bits (121), Expect(3) = 5e-035
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3 / +3
Query: 189 DGNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGD 326
+G PIGP ++W+Y P G+ +M +K +YGNP I ++ENGM D
Sbjct: 189 NGVPIGPRANSNWLYNVPWGMYKAVMYIKERYGNPTIILSENGMDD 326
Score = 32.7 bits (65), Expect(3) = 5e-035
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3 / +3
Query: 18 RLPFFTDKEQEKLVGSYDMLGLNYYTS 98
+LP FT K+ + + GS D +G+N YT+
Sbjct: 24 KLPQFTKKKVKMVKGSMDFVGINQYTT 104
>gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A001P37 3', mRNA sequence
Length = 816
Score = 93.2 bits (197), Expect(3) = 9e-034
Identities = 37/65 (56%), Positives = 47/65 (72%)
Frame = +3 / -2
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+L AL D R+ Y + +++ LK++ D GAN+ GYFAWSLLDNFEW GYT R+G
Sbjct: 362 DPGNLTRSKALQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFG 183
Query: 510 IVYVD 524
IVYVD
Sbjct: 182 IVYVD 168
Score = 51.5 bits (106), Expect(3) = 9e-034
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3 / -2
Query: 192 GNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGD 326
G IGP + W+Y P G+ +M +K +YGNP + ++ENGM D
Sbjct: 494 GVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDD 360
Score = 37.3 bits (75), Expect(3) = 9e-034
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3 / -2
Query: 18 RLPFFTDKEQEKLVGSYDMLGLNYYTSRF 104
RLP FT++E + + GS D +G+N+YT+ +
Sbjct: 662 RLPKFTEEEVKMVKGSMDFVGINHYTTYY 576
>gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 5', mRNA sequence
Length = 673
Score = 92.3 bits (195), Expect(3) = 2e-033
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +3 / +2
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+L A+ D R+ Y + +++ LK++ D GAN+ GYFAWSLLDNFEW GYT R+G
Sbjct: 311 DPGNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFG 490
Query: 510 IVYVD 524
IVYVD
Sbjct: 491 IVYVD 505
Score = 51.5 bits (106), Expect(3) = 2e-033
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3 / +2
Query: 192 GNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGD 326
G IGP + W+Y P G+ +M +K +YGNP + ++ENGM D
Sbjct: 179 GVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDD 313
Score = 37.3 bits (75), Expect(3) = 2e-033
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3 / +2
Query: 18 RLPFFTDKEQEKLVGSYDMLGLNYYTSRF 104
RLP FT++E + + GS D +G+N+YT+ +
Sbjct: 11 RLPKFTEEEVKMVKGSMDFVGINHYTTYY 97
>gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 3', mRNA sequence
Length = 673
Score = 92.3 bits (195), Expect(3) = 2e-033
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +3 / -2
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+L A+ D R+ Y + +++ LK++ D GAN+ GYFAWSLLDNFEW GYT R+G
Sbjct: 363 DPGNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFG 184
Query: 510 IVYVD 524
IVYVD
Sbjct: 183 IVYVD 169
Score = 51.5 bits (106), Expect(3) = 2e-033
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3 / -2
Query: 192 GNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGD 326
G IGP + W+Y P G+ +M +K +YGNP + ++ENGM D
Sbjct: 495 GVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDD 361
Score = 37.3 bits (75), Expect(3) = 2e-033
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3 / -2
Query: 18 RLPFFTDKEQEKLVGSYDMLGLNYYTSRF 104
RLP FT++E + + GS D +G+N+YT+ +
Sbjct: 663 RLPKFTEEEVKMVKGSMDFVGINHYTTYY 577
>gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0223_P11 3', mRNA sequence
Length = 667
Score = 92.3 bits (195), Expect(3) = 2e-033
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +3 / -2
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+L A+ D R+ Y + +++ LK++ D GAN+ GYFAWSLLDNFEW GYT R+G
Sbjct: 360 DPGNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFG 181
Query: 510 IVYVD 524
IVYVD
Sbjct: 180 IVYVD 166
Score = 51.5 bits (106), Expect(3) = 2e-033
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3 / -2
Query: 192 GNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGD 326
G IGP + W+Y P G+ +M +K +YGNP + ++ENGM D
Sbjct: 492 GVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDD 358
Score = 37.3 bits (75), Expect(3) = 2e-033
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3 / -2
Query: 18 RLPFFTDKEQEKLVGSYDMLGLNYYTSRF 104
RLP FT++E + + GS D +G+N+YT+ +
Sbjct: 660 RLPKFTEEEVKMVKGSMDFVGINHYTTYY 574
>gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041F03 3', mRNA sequence
Length = 842
Score = 142 bits (305), Expect = 2e-033
Identities = 63/168 (37%), Positives = 96/168 (57%)
Frame = +3 / -1
Query: 21 LPFFTDKEQEKLVGSYDMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQETNGPDGNP 200
LP F+ + KL D +G+N+YTS + ++ +S + +T +S T DG P
Sbjct: 677 LPEFSRNDMNKLRKGLDFIGMNHYTSYYVQDCILSVCEPGIGSTRTEGSSLLTQEKDGVP 498
Query: 201 IGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHGDLPMEVALDDHKRV 380
IG WI++Y G++ ++ +K +Y N P+ ITENG V + + +E L D RV
Sbjct: 497 IGKPSEVDWIHVYSRGMEKMVTYVKERYNNIPMIITENGYSQVSNSNGNIEEFLHDTGRV 318
Query: 381 HYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYGIVYVD 524
Y+ ++ L + GA+V+GYFAWS LDNFEW GYT R+G+ +VD
Sbjct: 317 EYMSGYLDALLTAMKKGADVRGYFAWSFLDNFEWTFGYTRRFGLYHVD 174
>gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02015A05 5', mRNA sequence
Length = 614
Score = 89.5 bits (189), Expect(2) = 1e-031
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +3 / -2
Query: 321 GDVDHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTE 500
G ++ P+ AL D R+ Y H++ L ++ GANV+ Y+ WS LD+FEW +GYT
Sbjct: 409 GIAENASRPLAFALKDSWRIRYHSAHLSYLLKAIQKGANVKAYYIWSFLDDFEWDAGYTV 230
Query: 501 RYGIVYVDRNDGCKRYMKRS 560
R+G+ YVD + KRY+K S
Sbjct: 229 RFGVTYVDFKNNLKRYLKSS 170
Score = 67.0 bits (140), Expect(2) = 1e-031
Identities = 24/61 (39%), Positives = 40/61 (65%)
Frame = +3 / -2
Query: 144 LNTDDAYASQETNGPDGNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMG 323
L+ D +T +G PIG +W+Y+YP G++D+L+ +K+ Y NPP++ITENG+
Sbjct: 580 LSYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNYKNPPVFITENGIA 401
Query: 324 D 326
+
Sbjct: 400 E 398
>gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 634
Score = 68.4 bits (143), Expect(3) = 4e-030
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3 / +2
Query: 177 TNGPDGNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHG 338
T +G IGP + W+Y+YP+G++ LL K++Y NP IYITENG+ D ++G
Sbjct: 260 TGEKNGKLIGPQAASPWLYVYPKGIRYLLNYTKDRYRNPTIYITENGVSDFNNG 421
Score = 55.1 bits (114), Expect(3) = 4e-030
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3 / +2
Query: 408 LKESRDLGANVQGYFAWSLLDNFEWFSGYTERYGIVYVD 524
L+ + G V+GYFAW+ D+FEW GYT R+G+ Y D
Sbjct: 497 LRSIENYGTIVKGYFAWTFADDFEWPDGYTIRFGLYYTD 613
Score = 46.0 bits (94), Expect(3) = 4e-030
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +3 / +2
Query: 15 ERLPFFTDKEQEKLVGSYDMLGLNYYTSRFSKNI 116
+RLP FT +E L GSYD+LG+NYY + ++KN+
Sbjct: 98 DRLPNFTAQEILDLRGSYDILGINYYGAYYAKNL 199
>gb|BU835778.1|BU835778 T078E10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 522
Score = 130 bits (279), Expect = 9e-030
Identities = 48/97 (49%), Positives = 71/97 (73%)
Frame = +3 / +3
Query: 270 MKNKYGNPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGY 449
+++KY NPPIYITENG+ D ++ LP++ AL D R+ YL H+ L ++ + GANV+GY
Sbjct: 6 VRDKYKNPPIYITENGLADANNASLPVKEALKDGLRIRYLASHLQYLSKAINEGANVKGY 185
Query: 450 FAWSLLDNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
+ W+L D+FEW +GYT R+G++Y+D + KRYMK S
Sbjct: 186 YQWALWDDFEWDAGYTVRFGMIYIDFKNNLKRYMKYS 296
>gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S066G12 3', mRNA sequence
Length = 824
Score = 70.3 bits (147), Expect(3) = 3e-028
Identities = 25/62 (40%), Positives = 42/62 (67%)
Frame = +3 / -3
Query: 225 WIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIA 404
W+++ P G+ LL +K+KYGNPP+ ITENGM D++ + + AL D KR+ Y + +++
Sbjct: 498 WLHIVPWGIHKLLKYVKDKYGNPPVVITENGMDDLNTPFISLSKALQDDKRIEYHRDYLS 319
Query: 405 TL 410
+
Sbjct: 318 NI 313
Score = 64.3 bits (134), Expect(3) = 3e-028
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +3 / -3
Query: 420 RDLGANVQGYFAWSLLDNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
R +V+GYFAWSLLDN+EW SGYT R+G+ +VD + R K S
Sbjct: 300 RQDNCDVRGYFAWSLLDNWEWNSGYTVRFGLYFVDYRNNLTRVPKAS 160
Score = 32.2 bits (64), Expect(3) = 3e-028
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3 / -2
Query: 15 ERLPFFTDKEQEKLVGSYDMLGLNYYTSRFSKN 113
ERL + + LVGS D +G+N+YT+ + +N
Sbjct: 796 ERLLEISQGMSKLLVGSLDFVGINHYTALYVRN 698
>gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 476
Score = 92.3 bits (195), Expect(2) = 2e-027
Identities = 37/65 (56%), Positives = 47/65 (72%)
Frame = +3 / +1
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+L AL D R+ Y + +++ LK++ GAN+ GYFAWSLLDNFEW SGYT R+G
Sbjct: 127 DPGNLTRSKALQDTTRIGYYKAYLSQLKKAAVDGANLVGYFAWSLLDNFEWTSGYTSRFG 306
Query: 510 IVYVD 524
IVYVD
Sbjct: 307 IVYVD 321
Score = 50.6 bits (104), Expect(2) = 2e-027
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3 / +1
Query: 201 IGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGD 326
IGP + W+Y P G+ +M +K +YGNP + ++ENGM D
Sbjct: 4 IGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDD 129
>gb|BP933409.1|BP933409 BP933409 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-051_A15.r 3', mRNA sequence
Length = 564
Score = 122 bits (260), Expect = 4e-027
Identities = 45/96 (46%), Positives = 67/96 (69%)
Frame = +3 / -2
Query: 273 KNKYGNPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYF 452
++KY NPP+ ITENG+ D ++ LP++ AL D R+ YL H+ L ++ GANV+GY+
Sbjct: 563 RDKYKNPPLDITENGLADANNASLPVKEALKDGLRIRYLASHLQYLSKAIKEGANVKGYY 384
Query: 453 AWSLLDNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
W+ D+FEW +GYT R+G++Y+D + KRYMK S
Sbjct: 383 QWAFWDDFEWDAGYTVRFGMIYIDFKNNLKRYMKYS 276
>gb|BI130255.1|BI130255 G102P91Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 485
Score = 121 bits (258), Expect = 7e-027
Identities = 55/154 (35%), Positives = 85/154 (55%)
Frame = +3 / +1
Query: 21 LPFFTDKEQEKLVGSYDMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQETNGPDGNP 200
LP F+ + KL D +G+N+YTS + ++ +S + +T +S T DG P
Sbjct: 16 LPEFSRNDMNKLRKGLDFIGMNHYTSYYVQDCILSVCEPGIGSTRTEGSSLLTQEKDGVP 195
Query: 201 IGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHGDLPMEVALDDHKRV 380
IG WI++Y G++ ++ +K +Y N P+ ITENG V + + +E L D RV
Sbjct: 196 IGKPSEVDWIHVYSRGMEKMVTYVKERYNNIPMIITENGYSQVSNSNGNIEEFLHDTGRV 375
Query: 381 HYLQRHIATLKESRDLGANVQGYFAWSLLDNFEW 482
Y+ ++ L + GA+V+GYFAWS LDN EW
Sbjct: 376 EYMSGYLDALLTAMKKGADVRGYFAWSFLDNLEW 477
>gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_K04 3', mRNA sequence
Length = 910
Score = 98.7 bits (209), Expect(2) = 8e-027
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = +3 / -3
Query: 288 NPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLL 467
N P D + D P+ LDD+ RV Y + ++A++ ++ G V+GYFAWSLL
Sbjct: 476 NNPTIYVTENGMDDEDIDAPLHEVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLL 297
Query: 468 DNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
DNFEW GYT+R+G+VYVD +G R+ K S
Sbjct: 296 DNFEWAQGYTKRFGLVYVDYKNGLSRHPKSS 204
Score = 44.6 bits (91), Expect(2) = 8e-027
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3 / -3
Query: 15 ERLPFFTDKEQEKLVGSYDMLGLNYYTSRFSKNIDISPNYS 137
E+LP FT++++E L D +GLN+YTSRF + SP S
Sbjct: 740 EQLPKFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEES 618
>gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_A18 3', mRNA sequence
Length = 916
Score = 98.7 bits (209), Expect(2) = 8e-027
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = +3 / -2
Query: 288 NPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLL 467
N P D + D P+ LDD+ RV Y + ++A++ ++ G V+GYFAWSLL
Sbjct: 645 NNPTIYVTENGMDDEDIDAPLHEVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLL 466
Query: 468 DNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
DNFEW GYT+R+G+VYVD +G R+ K S
Sbjct: 465 DNFEWAQGYTKRFGLVYVDYKNGLSRHPKSS 373
Score = 44.6 bits (91), Expect(2) = 8e-027
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3 / -2
Query: 15 ERLPFFTDKEQEKLVGSYDMLGLNYYTSRFSKNIDISPNYS 137
E+LP FT++++E L D +GLN+YTSRF + SP S
Sbjct: 909 EQLPKFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEES 787
>gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_O23 3', mRNA sequence
Length = 914
Score = 98.2 bits (208), Expect(2) = 1e-026
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = +3 / -1
Query: 288 NPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLL 467
N P D + D P+ LDD+ RV Y + ++A++ ++ G V+GYFAWSLL
Sbjct: 590 NNPTIYVTENGMDDEDIDAPLHEVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLL 411
Query: 468 DNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
DNFEW GYT+R+G+VYVD +G R+ K S
Sbjct: 410 DNFEWAQGYTKRFGLVYVDYKNGLARHPKSS 318
Score = 44.6 bits (91), Expect(2) = 1e-026
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3 / -1
Query: 15 ERLPFFTDKEQEKLVGSYDMLGLNYYTSRFSKNIDISPNYS 137
E+LP FT++++E L D +GLN+YTSRF + SP S
Sbjct: 854 EQLPQFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEES 732
>gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 643
Score = 68.4 bits (143), Expect(3) = 2e-026
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3 / +2
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEW 482
D G+L A+ D R+ Y + +++ LK++ D GAN+ GYFAWSLLDNFEW
Sbjct: 491 DPGNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANMVGYFAWSLLDNFEW 643
Score = 51.5 bits (106), Expect(3) = 2e-026
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3 / +2
Query: 192 GNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGD 326
G IGP + W+Y P G+ +M +K +YGNP + ++ENGM D
Sbjct: 359 GVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDD 493
Score = 37.3 bits (75), Expect(3) = 2e-026
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3 / +2
Query: 18 RLPFFTDKEQEKLVGSYDMLGLNYYTSRF 104
RLP FT++E + + GS D +G+N+YT+ +
Sbjct: 191 RLPKFTEEEVKMVKGSMDFVGINHYTTYY 277
>gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_D09 3', mRNA sequence
Length = 885
Score = 98.7 bits (209), Expect(2) = 4e-026
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = +3 / -3
Query: 288 NPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLL 467
N P D + D P+ LDD+ RV Y + ++A++ ++ G V+GYFAWSLL
Sbjct: 622 NNPTIYVTENGMDDEDIDAPLHEVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLL 443
Query: 468 DNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
DNFEW GYT+R+G+VYVD +G R+ K S
Sbjct: 442 DNFEWAQGYTKRFGLVYVDYKNGLSRHPKSS 350
Score = 42.3 bits (86), Expect(2) = 4e-026
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3 / -3
Query: 18 RLPFFTDKEQEKLVGSYDMLGLNYYTSRFSKNIDISPNYS 137
+LP FT++++E L D +GLN+YTSRF + SP S
Sbjct: 883 QLPKFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEES 764
>gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02035_N05 3', mRNA sequence
Length = 894
Score = 94.5 bits (200), Expect(2) = 1e-025
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +3 / -3
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+ AL D R+ Y + ++ LK++ D GAN+ GYFAWSLLDNFEW SGYT R+G
Sbjct: 361 DPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYTSRFG 182
Query: 510 IVYVD 524
IVYVD
Sbjct: 181 IVYVD 167
Score = 44.6 bits (91), Expect(2) = 1e-025
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3 / -1
Query: 222 SWIYLYPEGLKDLLMIMKNKYGNPPIYITENGM 320
+W+Y P G+ +M +K +YGNP I ++ENGM
Sbjct: 588 NWLYNVPWGMYKAVMYIKERYGNPTIILSENGM 490
>gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 399
Score = 93.2 bits (197), Expect(2) = 5e-025
Identities = 37/65 (56%), Positives = 47/65 (72%)
Frame = +3 / +3
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+L AL D R+ Y + +++ LK++ D GAN+ GYFAWSLLDNFEW GYT R+G
Sbjct: 186 DPGNLTRSKALQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFG 365
Query: 510 IVYVD 524
IVYVD
Sbjct: 366 IVYVD 380
Score = 41.4 bits (84), Expect(2) = 5e-025
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3 / +1
Query: 192 GNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITE 311
G IGP + W+Y P G+ +M +K +YGNP + ++E
Sbjct: 52 GVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSE 171
>gb|CV273187.1|CV273187 WS0171.B21_P05 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_P05 3', mRNA sequence
Length = 600
Score = 90.4 bits (191), Expect(2) = 9e-025
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +3 / -2
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
+ G L ++ L+D R+ Y + H++ L+ + G V+GYFAWS LD+FEW SGYT R+G
Sbjct: 488 NEGKLTLKQQLNDTMRIDYYRSHLSFLRLAMAEGVKVKGYFAWSFLDDFEWNSGYTVRFG 309
Query: 510 IVYVDRNDGCKRYMKRS 560
I+Y+D +G KR K S
Sbjct: 308 IIYIDYKNGLKRIPKLS 258
Score = 43.2 bits (88), Expect(2) = 9e-025
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3 / -2
Query: 243 EGLKDLLMIMKNKYGNPPIYITENGMGDVDH 335
+G++ LL+ K KY +P IYITENG+ +V++
Sbjct: 578 QGIRKLLLYTKRKYNDPVIYITENGVSEVNN 486
>gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_O18 5', mRNA sequence
Length = 789
Score = 68.4 bits (143), Expect(2) = 6e-024
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3 / -1
Query: 177 TNGPDGNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHG 338
T +G IGP + W+Y+YP+G++ LL K++Y NP IYITENG+ D ++G
Sbjct: 708 TGEKNGKLIGPQAASPWLYVYPKGIRYLLNYTKDRYRNPTIYITENGVSDFNNG 547
Score = 62.5 bits (130), Expect(2) = 6e-024
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +3 / -1
Query: 408 LKESRDLGANVQGYFAWSLLDNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
L+ + G V+GYFAW+ D+FEW GYT R+G+ Y D RY KRS
Sbjct: 471 LRSIENYGTIVKGYFAWTFADDFEWPDGYTIRFGLYYTDYLHNLHRYPKRS 319
>gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 668
Score = 99.6 bits (211), Expect(2) = 6e-024
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +3 / +3
Query: 339 DLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYGIVY 518
D P+ LDD+ RV Y + ++A+L ++ G V+GYFAWSLLDNFEW GYT+R+G+VY
Sbjct: 123 DAPLHEVLDDNLRVRYFKGYLASLAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVY 302
Query: 519 VDRNDGCKRYMKRS 560
VD +G R+ K S
Sbjct: 303 VDYKNGLSRHPKSS 344
Score = 31.3 bits (62), Expect(2) = 6e-024
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 288 NPPIYITENGMGDVD 332
NP IY+TENGM D D
Sbjct: 75 NPTIYVTENGMDDED 119
>gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_E17 3', mRNA sequence
Length = 832
Score = 94.5 bits (200), Expect(2) = 1e-023
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +3 / -3
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+ AL D R+ Y + ++ LK++ D GAN+ GYFAWSLLDNFEW SGYT R+G
Sbjct: 758 DPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYTSRFG 579
Query: 510 IVYVD 524
IVYVD
Sbjct: 578 IVYVD 564
Score = 35.4 bits (71), Expect(2) = 1e-023
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3 / -3
Query: 261 LMIMKNKYGNPPIYITENGMGD 326
+M +K +YGNP I ++ENGM D
Sbjct: 821 VMYIKERYGNPTIILSENGMDD 756
>gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_P15 3', mRNA sequence
Length = 479
Score = 94.5 bits (200), Expect(2) = 1e-023
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +3 / -2
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+ AL D R+ Y + ++ LK++ D GAN+ GYFAWSLLDNFEW SGYT R+G
Sbjct: 406 DPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYTSRFG 227
Query: 510 IVYVD 524
IVYVD
Sbjct: 226 IVYVD 212
Score = 35.4 bits (71), Expect(2) = 1e-023
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3 / -2
Query: 261 LMIMKNKYGNPPIYITENGMGD 326
+M +K +YGNP I ++ENGM D
Sbjct: 469 VMYIKERYGNPTIILSENGMDD 404
>gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_E15 5', mRNA sequence
Length = 727
Score = 110 bits (234), Expect = 2e-023
Identities = 45/112 (40%), Positives = 70/112 (62%)
Frame = +3 / -2
Query: 189 DGNPIGPWMGNSWIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHGDLPMEVALDD 368
D IG + +G++ L+ K++Y N P+YITENG + ++ ++ + L D
Sbjct: 711 DXXXIGQXTAXDXLXXXXQGMEKLVTYXKDRYNNIPMYITENGYCEEENVNVTTKAVLKD 532
Query: 369 HKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYGIVYVD 524
+RV Y+ ++ L+ + GA+V+GYFAWSLLDNFEW SGYT R+G+ +VD
Sbjct: 531 VQRVEYMSSYLDALETAVRKGADVRGYFAWSLLDNFEWTSGYTIRFGLYHVD 376
>gb|DN498729.1|DN498729 S066G12.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S066G12 5', mRNA sequence
Length = 774
Score = 70.3 bits (147), Expect(3) = 2e-023
Identities = 25/62 (40%), Positives = 42/62 (67%)
Frame = +3 / +3
Query: 225 WIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIA 404
W+++ P G+ LL +K+KYGNPP+ ITENGM D++ + + AL D KR+ Y + +++
Sbjct: 504 WLHIVPWGIHKLLKYVKDKYGNPPVVITENGMDDLNTPFISLSKALQDDKRIEYHRDYLS 683
Query: 405 TL 410
+
Sbjct: 684 NI 689
Score = 43.7 bits (89), Expect(3) = 2e-023
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3 / +3
Query: 420 RDLGANVQGYFAWSLLDNFEWFSG 491
R +V+GYFAWSLLDN+EW SG
Sbjct: 702 RQDNCDVRGYFAWSLLDNWEWNSG 773
Score = 36.8 bits (74), Expect(3) = 2e-023
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3 / +2
Query: 15 ERLPFFTDKEQEKLVGSYDMLGLNYYTSRFSKN 113
ERLP + + LVGS D +G+N+YT+ + +N
Sbjct: 206 ERLPEISQGMSKLLVGSLDFVGINHYTALYVRN 304
>gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 443
Score = 92.3 bits (195), Expect(2) = 1e-022
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +3 / +3
Query: 330 DHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTERYG 509
D G+L A+ D R+ Y + +++ LK++ D GAN+ GYFAWSLLDNFEW GYT R+G
Sbjct: 75 DPGNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANMVGYFAWSLLDNFEWRLGYTSRFG 254
Query: 510 IVYVD 524
IVYVD
Sbjct: 255 IVYVD 269
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3 / +3
Query: 255 DLLMIMKNKYGNPPIYITENGMGD 326
+ +M +K +YGNP + ++ENGM D
Sbjct: 6 EAVMYIKERYGNPTMILSENGMDD 77
>gb|BU866443.1|BU866443 S066G12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 745
Score = 70.3 bits (147), Expect(3) = 1e-022
Identities = 25/62 (40%), Positives = 42/62 (67%)
Frame = +3 / +3
Query: 225 WIYLYPEGLKDLLMIMKNKYGNPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIA 404
W+++ P G+ LL +K+KYGNPP+ ITENGM D++ + + AL D KR+ Y + +++
Sbjct: 483 WLHIVPWGIHKLLKYVKDKYGNPPVVITENGMDDLNTPFISLSKALQDDKRIEYHRDYLS 662
Query: 405 TL 410
+
Sbjct: 663 NI 668
Score = 40.5 bits (82), Expect(3) = 1e-022
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3 / +3
Query: 420 RDLGANVQGYFAWSLLDNFEW 482
R +V+GYFAWSLLDN+EW
Sbjct: 681 RQDNCDVRGYFAWSLLDNWEW 743
Score = 36.8 bits (74), Expect(3) = 1e-022
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3 / +2
Query: 15 ERLPFFTDKEQEKLVGSYDMLGLNYYTSRFSKN 113
ERLP + + LVGS D +G+N+YT+ + +N
Sbjct: 185 ERLPEISQGMSKLLVGSLDFVGINHYTALYVRN 283
>gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F008P84 3', mRNA sequence
Length = 793
Score = 98.7 bits (209), Expect(2) = 2e-022
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = +3 / -2
Query: 288 NPPIYITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLL 467
N P D + D P+ LDD+ RV Y + ++A++ ++ G V+GYFAWSLL
Sbjct: 570 NNPTIYVTENGMDDEDIDAPLHEVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLL 391
Query: 468 DNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
DNFEW GYT+R+G+VYVD +G R+ K S
Sbjct: 390 DNFEWAQGYTKRFGLVYVDYKNGLSRHPKSS 298
Score = 29.5 bits (58), Expect(2) = 2e-022
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3 / -2
Query: 69 DMLGLNYYTSRFSKNIDISPNYS 137
D +GLN+YTSRF + SP S
Sbjct: 780 DFVGLNHYTSRFITHATESPEES 712
>gb|DN485248.1|DN485248 M122A11.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M122A11 3', mRNA sequence
Length = 821
Score = 72.5 bits (152), Expect(2) = 4e-022
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3 / -1
Query: 408 LKESRDLGANVQGYFAWSLLDNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
L+ D G +V+G+FAWS LD+FEW SGY R+G+ Y+D + KRY K S
Sbjct: 608 LRSINDHGVDVKGFFAWSFLDDFEWGSGYGSRFGLFYIDYENNLKRYAKNS 456
Score = 52.4 bits (108), Expect(2) = 4e-022
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 240 PEGLKDLLMIMKNKYGNPPIYITENGMGDVDHGDL 344
PEG++ LL +K+ Y NPPIYITENG+ DV+ L
Sbjct: 773 PEGIRHLLNYIKDAYENPPIYITENGVDDVNSSSL 669
>gb|CV274297.1|CV274297 WS0172.B21_N05 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0172_N05 3', mRNA sequence
Length = 878
Score = 73.9 bits (155), Expect(3) = 6e-022
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +3 / -2
Query: 408 LKESRDLGANVQGYFAWSLLDNFEWFSGYTERYGIVYVDRNDGCKRYMKRS 560
L+ + G +V+G+FAWSL+DNFEW SGY R+G+ YVD + KRY K+S
Sbjct: 583 LRSINEHGVDVKGFFAWSLMDNFEWGSGYAVRFGLYYVDYKNDLKRYPKQS 431
Score = 40.9 bits (83), Expect(3) = 6e-022
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3 / -2
Query: 18 RLPFFTDKEQEKLVGSYDMLGLNYY 92
RLP FT +E + L GSYD +G+NYY
Sbjct: 766 RLPEFTAEESKMLKGSYDFIGINYY 692
Score = 30.9 bits (61), Expect(3) = 6e-022
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3 / -2
Query: 300 YITENGMGDVDHGDLPMEVALDDHKRVHYLQRHIATLKES 419
YITENG+ DV++ ++ AL+D R + H+ + S
Sbjct: 694 YITENGVDDVNNNASSLKEALNDPIREKSYKDHLKNVLRS 575
>gb|CA927840.1|CA927840 MTU6TR.P13.E11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 407
Score = 89.5 bits (189), Expect(2) = 1e-021
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +3 / -1
Query: 321 GDVDHGDLPMEVALDDHKRVHYLQRHIATLKESRDLGANVQGYFAWSLLDNFEWFSGYTE 500
G ++ P+ AL D R+ Y H++ L ++ GANV+ Y+ WS LD+FEW +GYT
Sbjct: 362 GIAENASRPLAYALKDSWRIRYHSAHLSYLLKAIQKGANVKAYYIWSFLDDFEWDAGYTV 183
Query: 501 RYGIVYVDRNDGCKRYMKRS 560
R+G+ YVD + KRY+K S
Sbjct: 182 RFGVTYVDFKNNLKRYLKSS 123
Score = 33.6 bits (67), Expect(2) = 1e-021
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3 / -1
Query: 270 MKNKYGNPPIYITENGMGD 326
+K+ Y NPP++ITENG+ +
Sbjct: 407 IKDNYKNPPVFITENGIAE 351
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 440,341,194
Number of Sequences: 369679
Number of extensions: 6678784
Number of successful extensions: 47964
Number of sequences better than 1.0e-020: 38
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 10784666760
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)