TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2762998.2.1
(1036 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV277864.1|CV277864 WS0144.B21_M12 PTxD-IL-A-5 Populus t... 322 2e-088
gb|DT489528.1|DT489528 WS02542.B21_H16 PT-MB-N-A-15 Populus... 179 5e-074
gb|CV266784.1|CV266784 WS0203.B21_P14 PTxN-IB-N-A-11 Populu... 149 2e-068
gb|DT504437.1|DT504437 WS01313.B21_F23 PTxD-IL-FL-A-4 Popul... 161 1e-066
gb|AJ771406.1|AJ771406 AJ771406 Populus euphratica leaf 3-6... 251 5e-066
gb|CX167586.1|CX167586 F09_69-15_11.ab1 leaf inoculated wit... 242 4e-063
gb|DN499218.1|DN499218 T035A05.5pR Populus shoot meristem c... 184 4e-057
gb|DT506672.1|DT506672 WS02416.BR_D08 PTxD-ICC-N-A-14 Popul... 190 3e-055
gb|CK097824.1|CK097824 UB63CPC07.3pR Populus active cambium... 111 5e-054
gb|BU878644.1|BU878644 V049G05 Populus flower cDNA library ... 174 1e-051
gb|DT474374.1|DT474374 WS01231.BR_L11 PT-GT-FL-A-3 Populus ... 104 1e-051
gb|DN501219.1|DN501219 UM73TH07.5pR Populus female catkins ... 134 2e-051
gb|DN486886.1|DN486886 P071E05.3pR Populus petioles cDNA li... 193 2e-051
gb|CV256310.1|CV256310 WS0243.B21_I03 PTxD-ICC-N-A-14 Popul... 101 5e-051
gb|DT511341.1|DT511341 WS02416.B21_D08 PTxD-ICC-N-A-14 Popu... 190 7e-051
gb|DT504701.1|DT504701 WS01314.B21_G13 PTxD-IL-FL-A-4 Popul... 173 5e-048
gb|DT510380.1|DT510380 WS02426.BR_G05 PTxD-ICC-N-A-14 Popul... 121 3e-047
gb|BP933327.1|BP933327 BP933327 full-length enriched poplar... 117 2e-046
gb|AJ778792.1|AJ778792 AJ778792 Populus euphratica cambium ... 111 2e-046
gb|DT477029.1|DT477029 WS01231.B21_L11 PT-GT-FL-A-3 Populus... 104 4e-046
gb|CV253989.1|CV253989 WS0223.B21_K15 PTxD-ICC-A-12 Populus... 101 7e-046
gb|DN488268.1|DN488268 R045E02.3pR Populus root cDNA librar... 178 4e-044
gb|DN501803.1|DN501803 V030E09.5pR Populus male catkins cDN... 89 3e-043
gb|CK114054.1|CK114054 V030E09 Populus male catkins cDNA li... 89 3e-043
gb|AJ777952.1|AJ777952 AJ777952 Populus euphratica root 3-6... 85 2e-042
gb|BU877149.1|BU877149 V030bE09 Populus flower cDNA library... 89 3e-042
gb|BI128232.1|BI128232 G072P94Y Populus cambium cDNA librar... 143 8e-042
gb|CA931540.1|CA931540 MTU2TA.P8.G03 Aspen apex cDNA Librar... 110 1e-041
gb|BU897479.1|BU897479 X058E02 Populus wood cDNA library Po... 98 2e-040
gb|CF233550.1|CF233550 PtaJXO0024H3H0315 Poplar cDNA librar... 115 2e-039
gb|BU886438.1|BU886438 R045E02 Populus root cDNA library Po... 159 3e-038
gb|CV268374.1|CV268374 WS0205.B21_E21 PTxN-IB-N-A-11 Populu... 85 3e-036
gb|CK318837.1|CK318837 X9P03h07 Populus stem seasonal libra... 150 1e-035
gb|CF237321.1|CF237321 Ptajxtjxt4F7F0711 Poplar cDNA librar... 148 7e-035
gb|CV243431.1|CV243431 WS02518.B21_N18 PT-MB-N-A-15 Populus... 148 7e-035
gb|DN492511.1|DN492511 X024D04.3pR Populus wood cDNA librar... 83 9e-035
gb|CK318972.1|CK318972 X9P05d12 Populus stem seasonal libra... 86 1e-034
gb|BP935099.1|BP935099 BP935099 full-length enriched poplar... 117 3e-034
gb|CV236599.1|CV236599 WS01224.B21.1_L02 PT-GT-FL-A-3 Popul... 81 8e-034
gb|DT515006.1|DT515006 WS02426.B21_G05 PTxD-ICC-N-A-14 Popu... 75 7e-033
gb|CK102311.1|CK102311 G072P94.5pR Populus tension wood cDN... 121 4e-032
gb|CN521995.1|CN521995 GQ0123.B3_K15 GQ012 Populus trichoca... 95 7e-032
gb|DN497951.1|DN497951 R045E02.5pR Populus root cDNA librar... 136 2e-031
gb|CK094628.1|CK094628 I045P63.3pR Populus senescing leaves... 136 3e-031
gb|BP933680.1|BP933680 BP933680 full-length enriched poplar... 84 8e-031
gb|DN491861.1|DN491861 V030E09.3pR Populus male catkins cDN... 89 4e-030
gb|DN492909.1|DN492909 X045E07.3pR Populus wood cDNA librar... 89 1e-029
gb|DN491209.1|DN491209 UM73TH07.3pR Populus female catkins ... 127 2e-029
gb|DT519713.1|DT519713 WS02443.B21_H08 PTxD-ICC-N-A-14 Popu... 121 7e-027
gb|CK097430.1|CK097430 UB50DPG05.3pR Populus active cambium... 121 7e-027
gb|DN502555.1|DN502555 X024D04.5pR Populus wood cDNA librar... 80 1e-026
gb|DN485653.1|DN485653 N022C01.3pR Populus bark cDNA librar... 86 4e-026
gb|CA932232.1|CA932232 MTU5CS.P10.D02 Aspen stem cDNA Libra... 118 5e-026
gb|CV232562.1|CV232562 WS0197.B21_P22 PT-DX-N-A-10 Populus ... 117 9e-026
gb|CB240482.1|CB240482 PopSC00468 Poplar SC cDNA library Po... 88 1e-025
gb|DN495152.1|DN495152 N022C01.5pR Populus bark cDNA librar... 98 4e-025
gb|CV276809.1|CV276809 WS0141.B21_N13 PTxD-IL-A-5 Populus t... 102 1e-024
gb|DT491150.1|DT491150 WS02546.C21.1_P04 PT-MB-N-A-15 Popul... 98 2e-023
gb|CA823698.1|CA823698 R30A02 two-month-old roots from clon... 96 4e-023
gb|CV282152.1|CV282152 WS0183.B21_N16 PTxD-IL-N-A-9 Populus... 93 2e-022
gb|CK096621.1|CK096621 UB21CPA08.3pR Populus active cambium... 93 2e-022
gb|CV231309.1|CV231309 WS0194.B21_C14 PT-DX-N-A-10 Populus ... 106 2e-022
gb|DT469254.1|DT469254 WS01917.C21_D15 PT-DX-N-A-10 Populus... 91 3e-022
gb|CA930198.1|CA930198 MTU2CA.P8.D09 Aspen apex cDNA Librar... 87 9e-022
gb|CV235387.1|CV235387 WS01218.B21_O20 PT-GT-FL-A-3 Populus... 92 2e-021
gb|BU882193.1|BU882193 UM73TH07 Populus flower cDNA library... 102 3e-021
gb|DT488709.1|DT488709 WS02537.B21_D05 PT-MB-N-A-15 Populus... 102 4e-021
>gb|CV277864.1|CV277864 WS0144.B21_M12 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0144_M12 3', mRNA sequence
Length = 897
Score = 322 bits (697), Expect(2) = 2e-088
Identities = 135/212 (63%), Positives = 166/212 (78%)
Frame = -2 / +3
Query: 1035 ELXXXXXXAVIXSAXXXXXSFTDXXXXXXVXXXXELKXXXXMFPIWATAIIFSAVYAQNS 856
EL AV+ A F + V ELK MFPIWAT I+FSAVYAQ S
Sbjct: 222 ELKCLDKAAVLSEAEMKSGDFPNPWRLCTVTQVEELKILIRMFPIWATGIVFSAVYAQMS 401
Query: 855 SMFIEQGMVLDKRIGSFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSEL 676
+MF+EQGM++D IGSF IPPASLS+FDVISVI WVP+YDRI+VP+ARKFTG+E+GFS+L
Sbjct: 402 TMFVEQGMLMDTTIGSFTIPPASLSSFDVISVIFWVPIYDRIVVPIARKFTGKERGFSDL 581
Query: 675 QRMGIGLVLSILAMVSAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVF 496
QRMGIGL +S+L+M +AALVE+KRL++A+ GL E AVP+SILWQIPQ+ LVGA+EVF
Sbjct: 582 QRMGIGLFISVLSMTAAALVEIKRLQLAKELGLAGEAVAVPISILWQIPQFMLVGASEVF 761
Query: 495 TCIGQVEFFYDQAPDAMRSLCSALALITVSLG 400
T IGQ+EFFY+++PDAMRSLCSAL+L+T SLG
Sbjct: 762 TFIGQIEFFYEESPDAMRSLCSALSLLTTSLG 857
Score = 210 bits (452), Expect = 2e-053
Identities = 104/212 (49%), Positives = 127/212 (59%)
Frame = +2 / -3
Query: 401 PSETVISASALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS*MR 580
P + V S +ALHKL +ASG S*KNS *P+ V TS APT GIC ++LIGTA S
Sbjct: 856 PKDVVRSDNALHKLRIASGDSS*KNSI*PMNVKTSEAPTNINWGICHKILIGTATASPAN 677
Query: 581 PSDLAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMM 760
PS A +R ST+AA I + PIPIRC SEKP S PVNFLA GT + S* GT +
Sbjct: 676 PSSFASCRRLISTKAAAVIDNTEMNRPIPIRCKSEKPLSFPVNFLAMGTTILS*IGTQKI 497
Query: 761 TLITSKVERDAGGMLKDPMRLSRTMPCSMNMEEFWA*TALNMIAVAQMGNIXXXIFNSXX 940
TLITSK +RDAGG++K+P+ +S ++PCS N+ + WA TA I VAQ+GN+ IFNS
Sbjct: 496 TLITSKDDRDAGGIVKEPIVVSISIPCSTNIVDIWAYTAEKTIPVAQIGNMRIKIFNSST 317
Query: 941 XXTXXXXXXSVKDXXXXXADXXTAXXXXXSSS 1036
T K A TA SS
Sbjct: 316 CVTVQSLQGLGKSPLFISASDSTAALSRHFSS 221
Score = 107 bits (229), Expect = 1e-022
Identities = 58/164 (35%), Positives = 86/164 (52%)
Frame = +1 / -2
Query: 442 PHGIWGLIVKELNLTNTSKHLSSAHQEILWYLPKNAHWNSSLLMNETFRPGNL*TLQLN* 621
PH IW ++E NLTN K+ S +Q L LP N + + ++ L* L L+
Sbjct: 815 PHCIWRFFIEEFNLTNECKNF*STYQHKLGDLP*NTDRHCNSFTSQPKLFRKL*ALNLHQ 636
Query: 622 SCRYHRENGQD*SNSHPL*LRKTLLPSSEFSS*WHQDAVIEWDPHDDADYIKSGERCRRN 801
S H + + +NSH L + + L S E + + +I+W P ++ + IK +RC RN
Sbjct: 635 SSSCH**H*NEQANSHTLQI*EAPLFSCELPCNGNNNPIIDWHPENNTNNIKG*QRCWRN 456
Query: 802 VERPNALVKNHALLYEHGRVLGINSTEYDSSSPNGKHXXXXLQF 933
ER N V H L ++H R LGI+S + +S SP+ KH LQF
Sbjct: 455 CERTNCRVHQHPLFHKHSRHLGIHSGKDNSCSPDWKHADQNLQF 324
Score = 24.9 bits (48), Expect(2) = 2e-088
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 402 GNYISSIILTLVSY 361
G Y+SS ILT+V+Y
Sbjct: 854 GYYLSSFILTMVAY 895
>gb|DT489528.1|DT489528 WS02542.B21_H16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_H16 3', mRNA sequence
Length = 712
Score = 179 bits (385), Expect(2) = 5e-074
Identities = 67/105 (63%), Positives = 90/105 (85%)
Frame = -2 / -2
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+E +VP+SI WQ+PQYFL+G AEVFT IGQ+EFFY+QAPDAMRS+CSAL+L TV+LGNY
Sbjct: 489 YELDSVPISIFWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSMCSALSLTTVALGNY 310
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+SS+++T+V+ I+T+ G GWIPDNLN GH+D FFWL+ +S ++
Sbjct: 309 LSSLLVTIVTTISTKNGKAGWIPDNLNYGHIDYFFWLLGILSVLN 175
Score = 119 bits (255), Expect(2) = 5e-074
Identities = 48/71 (67%), Positives = 61/71 (85%)
Frame = -2 / -2
Query: 798 PPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAAL 619
P ASLS FD +SVI WVP+YDRI+VP+ARKFTG + G ++LQRMGIGL +SI AMVSAA+
Sbjct: 711 PSASLSIFDTLSVIFWVPVYDRIIVPVARKFTGHKNGLTQLQRMGIGLFISIFAMVSAAI 532
Query: 618 VELKRLEIARS 586
+ELKRL++ R+
Sbjct: 531 LELKRLQMVRN 499
Score = 104 bits (221), Expect(2) = 4e-041
Identities = 53/97 (54%), Positives = 64/97 (65%)
Frame = +2 / +2
Query: 284 NQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLLMASGA* 463
+QK S P F+LSGIHP P V+M T V+ EL * PS TV+S A H LL+ASGA
Sbjct: 200 SQKK*SM*P*FKLSGIHPAFPFLVLMVVTMVTRRELK*LPSATVVSDRAEHMLLIASGAC 379
Query: 464 S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS* 574
S*KNS P+ V TSA P +KYCG CQ + +GT + S*
Sbjct: 380 S*KNSNCPMNVKTSAQPIRKYCGTCQNIEMGTESSS* 490
Score = 84.9 bits (179), Expect(2) = 4e-041
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +2 / +2
Query: 590 LAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLI 769
L I +S AADT+A +D P+PIRCS KPF PVNFLA+GT +RS +GT MTL
Sbjct: 503 LTICSLLSSKIAADTMANIDMNRPMPIRCS*VKPFLCPVNFLATGTIIRSYTGTQKMTLR 682
Query: 770 TSKVERDAGG 799
SK+++DA G
Sbjct: 683 VSKMDKDADG 712
>gb|CV266784.1|CV266784 WS0203.B21_P14 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0203_P14 3', mRNA sequence
Length = 853
Score = 149 bits (320), Expect(2) = 2e-068
Identities = 59/114 (51%), Positives = 84/114 (73%)
Frame = -2 / +1
Query: 600 EIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALA 421
EI R + + K +SI WQIPQY LVGA+EVF +GQ+EFF QAPD ++S S+L
Sbjct: 448 EIERLKHVTEGKKVSSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLC 627
Query: 420 LITVSLGNYISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+ ++SLGNY+SS+++++V IT +G PGWIPD+LN GH+DRF++LIA ++ D
Sbjct: 628 MASISLGNYVSSMLVSMVMKITAKGDKPGWIPDDLNTGHMDRFYFLIAVLTAFD 789
Score = 131 bits (280), Expect(2) = 2e-068
Identities = 53/112 (47%), Positives = 78/112 (69%)
Frame = -2 / +1
Query: 933 ELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGSFNIPPASLSTFDVISVIM 754
E K M PIW II+S V+ Q +S+F+EQG V++ G F++P AS+S FD+ SV++
Sbjct: 130 EAKCVLKMLPIWLCTIIYSVVFTQMASLFVEQGDVMNSYAGKFHLPAASMSAFDICSVLV 309
Query: 753 WVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLE 598
+Y +ILVPLA + +G KG +ELQRMGIGL++ +LAM +A E++RL+
Sbjct: 310 CTGIYRQILVPLAGRLSGNTKGLTELQRMGIGLIIGMLAMFAAGATEIERLK 465
Score = 89.5 bits (189), Expect(2) = 3e-028
Identities = 49/108 (45%), Positives = 60/108 (55%)
Frame = +2 / -3
Query: 278 AINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLLMASG 457
AI + N S P F+ SGIHPG P V++ T ++ M L * P E S L KLL+ SG
Sbjct: 770 AIRK*NLSM*PVFKSSGIHPGLSPLAVIFITMLTSMLLT*LPREIEAMQSELPKLLIPSG 591
Query: 458 A*S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS*MRPSDLAIS 601
A KNS P + TS APT+ YCGICQ ML F + L+IS
Sbjct: 590 ACPLKNSNWPTYMKTSDAPTRTYCGICQNMLSELTFFPSVTCLSLSIS 447
Score = 56.5 bits (117), Expect(2) = 3e-028
Identities = 37/100 (37%), Positives = 46/100 (46%)
Frame = +2 / -3
Query: 614 STRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLITSKVERDA 793
S A IA + +PIPI SS P LP+N A+GTR+ * TL SK + A
Sbjct: 449 SVAPAANIASIPMMSPIPIL*SSVNPLVLPLNLPANGTRIWR*IPVQTRTLQISKADMLA 270
Query: 794 GGMLKDPMRLSRTMPCSMNMEEFWA*TALNMIAVAQMGNI 913
G P T PCS E T +I +Q+GNI
Sbjct: 269 AGR*NFPA*EFMTSPCSTKREAICVKTTE*IIVHSQIGNI 150
>gb|DT504437.1|DT504437 WS01313.B21_F23 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_F23 3', mRNA sequence
Length = 821
Score = 161 bits (347), Expect(2) = 1e-066
Identities = 62/105 (59%), Positives = 84/105 (80%)
Frame = -2 / -3
Query: 573 HEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNY 394
+E +VP+ I WQ+PQYFL+G AEVFT IGQ+EFFY+QAPDAMRS+C AL+L V+LGNY
Sbjct: 606 YELDSVPIFIFWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSMCFALSLPPVALGNY 427
Query: 393 ISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+S ++T+V+ I+T+ G GWIPDNLN G +D FFWL+ +S ++
Sbjct: 426 LSFFLVTIVTTISTKNGKAGWIPDNLNYGPIDYFFWLLGILSVLN 292
Score = 112 bits (239), Expect(2) = 1e-066
Identities = 45/68 (66%), Positives = 58/68 (85%)
Frame = -2 / -3
Query: 789 SLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVEL 610
SLS FD +SVI WVP+YDRI+VP+ARKFTG + G ++LQRMGIGL +SI AMV AA++EL
Sbjct: 819 SLSIFDTLSVIFWVPVYDRIIVPVARKFTGHKNGLTQLQRMGIGLFISIFAMVFAAILEL 640
Query: 609 KRLEIARS 586
KRL++ R+
Sbjct: 639 KRLQMVRN 616
Score = 92.7 bits (196), Expect(2) = 8e-036
Identities = 50/97 (51%), Positives = 61/97 (62%)
Frame = +2 / +2
Query: 284 NQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLLMASGA* 463
+QK S P F+LSGIHP P V+M T V+ +L * PS T S A H LL+ASGA
Sbjct: 317 SQKK*SMGP*FKLSGIHPAFPFLVLMVVTMVTKKKLK*LPSATGGSDRAKHMLLIASGAC 496
Query: 464 S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS* 574
S*KNS P+ V TSA P +KY G CQ + +GT + S*
Sbjct: 497 S*KNSNCPMNVKTSAQPIRKYWGTCQNIKMGTESSS* 607
Score = 78.5 bits (165), Expect(2) = 8e-036
Identities = 35/67 (52%), Positives = 46/67 (68%)
Frame = +2 / +2
Query: 590 LAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLI 769
L I +S AA+T+A +D P+PIRCS KPF PVNFLA+GT +RS +GT MTL
Sbjct: 620 LTICSLLSSKIAANTMANIDMNRPMPIRCS*VKPFLCPVNFLATGTIIRSYTGTQKMTLR 799
Query: 770 TSKVERD 790
SK+++D
Sbjct: 800 VSKMDKD 820
>gb|AJ771406.1|AJ771406 AJ771406 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500006F06F1, mRNA sequence
Length = 438
Score = 251 bits (543), Expect = 5e-066
Identities = 100/145 (68%), Positives = 127/145 (87%)
Frame = -2 / +2
Query: 747 PLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLIHE 568
P+YD I+VP+ARKFTG+++GFS+LQRMGIGL +S+L+M +AALVE+KRL++A+ GL E
Sbjct: 2 PIYDGIVVPIARKFTGKDRGFSDLQRMGIGLFISMLSMTAAALVEIKRLQLAKELGLTGE 181
Query: 567 KAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYIS 388
AVP+SI WQIPQY LVGA+EVFT IGQ+EFFY+++PDAMRSLCSAL+L+T SLGNY+S
Sbjct: 182 AVAVPISIFWQIPQYMLVGASEVFTFIGQIEFFYEESPDAMRSLCSALSLLTTSLGNYLS 361
Query: 387 SIILTLVSYITTQGGDPGWIPDNLN 313
S ILT+V+Y TT GG P WIPDNL+
Sbjct: 362 SSILTMVTYFTTTGGKP*WIPDNLH 436
Score = 163 bits (351), Expect = 1e-039
Identities = 82/146 (56%), Positives = 96/146 (65%)
Frame = +2 / -1
Query: 311 SFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLLMASGA*S*KNST*PI 490
S +LSGIH G PP VV T V + EL * P + V S +ALHKL +ASG S*KNS *P+
Sbjct: 438 SCKLSGIHHGFPPVVVK*VTIVRIEELK*LPKDVVRSDNALHKLRIASGDSS*KNSI*PM 259
Query: 491 QVNTSAAPTKKYCGICQRMLIGTAAFS*MRPSDLAISKRFNSTRAADTIARMDRTNPIPI 670
V TS APT Y GICQ++LIGTA S + PS A +R ST+AA I ++ PIPI
Sbjct: 258 NVKTSEAPTNIYWGICQKILIGTATASPVNPSSFASCRRLISTKAAAVIDNIEMNRPIPI 79
Query: 671 RCSSEKPFSLPVNFLASGTRMRS*SG 748
RC SEKP S PVNFLA GT + S* G
Sbjct: 78 RCKSEKPLSFPVNFLAMGTTIPS*IG 1
>gb|CX167586.1|CX167586 F09_69-15_11.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 632
Score = 242 bits (522), Expect = 4e-063
Identities = 96/144 (66%), Positives = 122/144 (84%)
Frame = -2 / -2
Query: 666 GIGLVLSILAMVSAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCI 487
GIGL +S+L+M +AALVE+KRL++A+ GL E AVP+SI+WQIPQ+ LVGA+EVFT I
Sbjct: 631 GIGLFISVLSMTAAALVEIKRLQLAKELGLAGEAVAVPISIIWQIPQFMLVGASEVFTFI 452
Query: 486 GQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDNLNEG 307
GQ+EFFY+++PDAMRSLCSAL+L+T SLGNY+SS ILT+V+Y TT GG PGWIPDNLNEG
Sbjct: 451 GQIEFFYEESPDAMRSLCSALSLLTTSLGNYLSSFILTMVAYFTTTGGKPGWIPDNLNEG 272
Query: 306 HLDRFFWLIAGISFVDPPPPMGCA 235
HLD FFWL+AG+S ++ + CA
Sbjct: 271 HLDYFFWLLAGLSVLNMLVYVFCA 200
Score = 140 bits (300), Expect = 2e-032
Identities = 72/133 (54%), Positives = 83/133 (62%)
Frame = +2 / +3
Query: 269 LIPAINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLLM 448
L PA +QK SRWPSF+LSGIHPG PP VV T V + EL * P + V S +ALHKL +
Sbjct: 234 LSPAKSQKK*SRWPSFKLSGIHPGFPPVVVK*ATIVRIKELK*LPKDVVRSDNALHKLRI 413
Query: 449 ASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS*MRPSDLAISKRFNSTRAA 628
ASG S*KNS *P+ V TS APT GIC +LIGTA S PS A +R ST+AA
Sbjct: 414 ASGDSS*KNSI*PMNVKTSEAPTNINWGICHIILIGTATASPANPSSFASCRRLISTKAA 593
Query: 629 DTIARMDRTNPIP 667
I + PIP
Sbjct: 594 AVIDNTEMNRPIP 632
>gb|DN499218.1|DN499218 T035A05.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T035A05 5', mRNA sequence
Length = 697
Score = 184 bits (397), Expect(2) = 4e-057
Identities = 68/100 (68%), Positives = 89/100 (89%)
Frame = -2 / +2
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PM+I WQ+PQYFL G AEVFT IGQ+EFFYDQAPDAMRSLCSAL+L TV+LGNY+++++
Sbjct: 152 IPMTIFWQVPQYFLTGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLNTLL 331
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
+T+V+ +TT+GG GWIPDNLN GHLD F+WL+A +SF++
Sbjct: 332 VTIVTKVTTRGGKLGWIPDNLNRGHLDYFYWLLAILSFLN 451
Score = 114 bits (243), Expect(2) = 3e-028
Identities = 60/120 (50%), Positives = 76/120 (63%)
Frame = +2 / -2
Query: 266 KLIPAINQKNRSRWPSFRLSGIHPGSPP*VVMYDTNVSMMELI*FPSETVISASALHKLL 445
KL A +Q SRWP F+LSGI P PP VV T V+ *FP+ TV+ A HKLL
Sbjct: 444 KLRIAKSQ*K*SRWPLFKLSGIQPSFPPLVVTLVTMVTRRVFK*FPNATVVRERAEHKLL 265
Query: 446 MASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAFS*MRPSDLAISKRFNSTRA 625
+ASGA S*KNS P++V TSA P +KYCG CQ+M+IG + S* S +S+ ++T A
Sbjct: 264 IASGAWS*KNSNCPMKVKTSAHPVRKYCGTCQKMVIGMYSRS**LFSRTKLSRTTSNTPA 85
Score = 57.9 bits (120), Expect(2) = 4e-057
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = -2 / +2
Query: 711 KFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIAR 589
KFTG +GF++LQRMGIGLV+S+++M+ A ++E+ RL R
Sbjct: 2 KFTGHVRGFTQLQRMGIGLVISLVSMIVAGVLEVVRLNFVR 124
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2 / -2
Query: 605 RFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNF 712
R S A + D T P+PIR S KP + PVNF
Sbjct: 108 RTTSNTPATIMETNDMTRPMPIRWS*VKPRT*PVNF 1
>gb|DT506672.1|DT506672 WS02416.BR_D08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_D08 5', mRNA sequence
Length = 778
Score = 190 bits (410), Expect(3) = 3e-055
Identities = 78/164 (47%), Positives = 108/164 (65%)
Frame = -2 / +1
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP S+S F + S++ + YDRILVP+A KFTG E+G S L RMGIG V+SI A +
Sbjct: 112 SFQIPAGSMSVFTMTSMLTTIAFYDRILVPVASKFTGLERGISFLHRMGIGFVISIFATL 291
Query: 630 SAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPD 451
A VE+KR +A + GLI+ + +P+ + W +PQY L G AE F IG +EFFYDQAP+
Sbjct: 292 VAGFVEIKRKHVASAHGLINSQQPIPIPVFWLVPQYCLHGIAEAFMSIGHLEFFYDQAPE 471
Query: 450 AMRSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDN 319
+MRS AL +S+GNY S++++TLV + W+PD+
Sbjct: 472 SMRSSAMALFWTAISVGNYASTLLVTLVHKFSAGSDGSNWLPDD 603
Score = 122 bits (260), Expect = 5e-027
Identities = 65/151 (43%), Positives = 86/151 (56%)
Frame = +2 / -3
Query: 368 TNVSMMELI*FPSETVISASALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCGICQRM 547
T V+ L *FP+E + SA+ LL+ SGA*S*KNS PI + SA P ++YCG Q+
Sbjct: 554 TKVTKSVLA*FPTEIAVQNSAIALLLILSGA*S*KNSKCPIDIKASAIP*RQYCGTSQKT 375
Query: 548 LIGTAAFS*MRPSDLAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGT 727
IG +RP A R ST+ A +A +D T PIPIRC P S PVN LA+GT
Sbjct: 374 GIGIGC*ELIRP*AEATCFRLISTKPATRVANIDMTKPIPIRCRKLIPRSSPVNLLATGT 195
Query: 728 RMRS*SGTHMMTLITSKVERDAGGMLKDPMR 820
+MRS* + + K + + G+ KD +R
Sbjct: 194 KMRS*KAIVVSMEVMVKTDIEPAGI*KDFVR 102
Score = 33.1 bits (66), Expect(3) = 3e-055
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2 / +1
Query: 912 MFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRI 814
M PIWA I+ YAQ ++ ++Q +D+ +
Sbjct: 7 MGPIWAAGILLITAYAQQNTFSLQQAKSMDRHL 105
Score = 30.9 bits (61), Expect(3) = 3e-055
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2 / +1
Query: 324 DNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIK 217
DNLN+G L+ F+WLI + + + CA + K
Sbjct: 601 DNLNKGKLEYFYWLITLLQVANLIYYLFCAKMYTFK 708
>gb|CK097824.1|CK097824 UB63CPC07.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB63CPC07 3', mRNA sequence
Length = 853
Score = 111 bits (236), Expect(3) = 5e-054
Identities = 38/97 (39%), Positives = 65/97 (67%)
Frame = -2 / -1
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
VP+SI W +PQY L+G +++FT +G EFFY + P MR++ AL +G+++S+++
Sbjct: 349 VPLSIFWLLPQYILLGISDIFTVVGMQEFFYSEVPVRMRTMGIALYTSVFGVGSFLSALL 170
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGIS 268
++LV Y T+ G W D++ E LD+++WL+A +S
Sbjct: 169 ISLVEYFTSSTGGKNWFSDDMREARLDKYYWLLALLS 59
Score = 101 bits (215), Expect(3) = 5e-054
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = -2 / -1
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IPPA+L + +S+I+ +P YD +L+PLAR T EKG S +RMGIG+VLSI+AM
Sbjct: 607 SFKIPPATLQSSITVSIILLMPFYDALLIPLARLITRDEKGISVTERMGIGMVLSIIAMA 428
Query: 630 SAALVELKRLEIARSEGLIHEK 565
AALVE KRLEI + ++ +K
Sbjct: 427 IAALVETKRLEIGQRMEVVGQK 362
Score = 38.2 bits (77), Expect(3) = 5e-054
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -2 / -1
Query: 927 KXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIGS 808
K + PIW+ I+F+ ++ ++ F +QGM + + +GS
Sbjct: 727 KVVLRLLPIWSMLIMFAVIFQLPATFFTKQGMTMKRNVGS 608
>gb|BU878644.1|BU878644 V049G05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 805
Score = 174 bits (374), Expect(3) = 1e-051
Identities = 72/143 (50%), Positives = 97/143 (67%)
Frame = -2 / +2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP S+S F + S++ + YDRILVP+A KFTG E+G S L RMGIG V+SI A +
Sbjct: 239 SFQIPAGSMSVFTMTSMLTTIAFYDRILVPVASKFTGLERGISFLHRMGIGFVISIFATL 418
Query: 630 SAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPD 451
A VE+KR +A + GLI+ + +P+ + W +PQY L G AE F IG +EFFYDQAP+
Sbjct: 419 VAGFVEIKRKHVASAHGLINSQQPIPIPVFWLVPQYCLHGIAEAFMSIGHLEFFYDQAPE 598
Query: 450 AMRSLCSALALITVSLGNYISSI 382
+MRS AL +S+GNY S++
Sbjct: 599 SMRSSAMALFWTAISVGNYASTL 667
Score = 119 bits (254), Expect = 3e-026
Identities = 63/144 (43%), Positives = 83/144 (57%)
Frame = +2 / -2
Query: 389 LI*FPSETVISASALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAF 568
L *FP+E + SA+ LL+ SGA*S*KNS PI + SA P ++YCG Q+ IG
Sbjct: 660 LA*FPTEIAVQNSAIALLLILSGA*S*KNSKCPIDIKASAIP*RQYCGTSQKTGIGIGC* 481
Query: 569 S*MRPSDLAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SG 748
+RP A R ST+ A +A +D T PIPIRC P S PVN LA+GT+MRS*
Sbjct: 480 ELIRP*AEATCFRLISTKPATRVANIDMTKPIPIRCRKLIPRSSPVNLLATGTKMRS*KA 301
Query: 749 THMMTLITSKVERDAGGMLKDPMR 820
+ + K + + G+ KD +R
Sbjct: 300 IVVSMEVMVKTDIEPAGI*KDFVR 229
Score = 38.2 bits (77), Expect(3) = 1e-051
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2 / +2
Query: 933 ELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRI 814
ELK M PIWA I+ YAQ ++ ++Q +D+ +
Sbjct: 113 ELKSIIRMGPIWAAGILLITAYAQQNTFSLQQAKSMDRHL 232
Score = 30.4 bits (60), Expect(3) = 1e-051
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2 / +3
Query: 324 DNLNEGHLDRFFWLI 280
DNLN+G L+ F+WLI
Sbjct: 729 DNLNKGKLEYFYWLI 773
>gb|DT474374.1|DT474374 WS01231.BR_L11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_L11 5', mRNA sequence
Length = 866
Score = 104 bits (222), Expect(4) = 1e-051
Identities = 40/92 (43%), Positives = 59/92 (64%)
Frame = -2 / +3
Query: 594 ARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALI 415
A + GLI+ + +P+ + W +PQY L G AE F IG +EFFYDQAP++MRS AL
Sbjct: 513 ASAHGLINSQQPIPIPVFWLVPQYCLHGIAEAFMSIGHLEFFYDQAPESMRSSAMALFWT 692
Query: 414 TVSLGNYISSIILTLVSYITTQGGDPGWIPDN 319
+S+GNY S++++TLV + W+PD+
Sbjct: 693 AISVGNYASTLLVTLVHKFSAGSDGSNWLPDD 788
Score = 88.6 bits (187), Expect(4) = 1e-051
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = -2 / +1
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP S+S F + S++ + YDRILVP+A KFTG E+G S L RMGIG V+SI A +
Sbjct: 298 SFQIPAGSMSVFTMTSMLTTIAFYDRILVPVASKFTGLERGISFLHRMGIGFVISIFATL 477
Query: 630 SAALVELKR 604
A VE+KR
Sbjct: 478 VAGFVEIKR 504
Score = 65.2 bits (136), Expect(2) = 2e-023
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +2 / -2
Query: 368 TNVSMMELI*FPSETVISASALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCGICQRM 547
T V+ L *FP+E + SA+ LL+ SGA*S*KNS PI + SA P ++YCG Q+
Sbjct: 739 TKVTKSVLA*FPTEIAVQNSAIALLLILSGA*S*KNSKCPIDIKASAIP*RQYCGTSQKT 560
Query: 548 LIGTAAFS*MRP 583
IG +RP
Sbjct: 559 GIGIGC*ELIRP 524
Score = 64.3 bits (134), Expect(2) = 2e-023
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2 / -1
Query: 605 RFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLITSKVE 784
R ST+ A +A +D T PIPIRC P S PVN LA+GT+MRS* + + K +
Sbjct: 503 RLISTKPATRVANIDMTKPIPIRCRKLIPRSSPVNLLATGTKMRS*KAIVVSMEVMVKTD 324
Query: 785 RDAGGMLKDPMR 820
+ G+ KD +R
Sbjct: 323 IEPAGI*KDFVR 288
Score = 38.2 bits (77), Expect(4) = 1e-051
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2 / +1
Query: 933 ELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRI 814
ELK M PIWA I+ YAQ ++ ++Q +D+ +
Sbjct: 172 ELKSIIRMGPIWAAGILLITAYAQQNTFSLQQAKSMDRHL 291
Score = 29.0 bits (57), Expect(4) = 1e-051
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2 / +3
Query: 324 DNLNEGHLDRFFWLI 280
DNLN+G L+ F+W+I
Sbjct: 786 DNLNKGKLEYFYWVI 830
>gb|DN501219.1|DN501219 UM73TH07.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone UM73TH07 5', mRNA sequence
Length = 865
Score = 134 bits (288), Expect(2) = 2e-051
Identities = 61/143 (42%), Positives = 86/143 (60%)
Frame = -2 / +3
Query: 1011 AVIXSAXXXXXSFTDXXXXXXVXXXXELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGM 832
A+I S D V E K + PIW I +S V+ Q +S+F+EQG
Sbjct: 210 AIITSKDYTENRIHDPWRVCTVNQVEEFKCILRLLPIWLCTIPYSVVFTQMASLFVEQGA 389
Query: 831 VLDKRIGSFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLV 652
+ I F+IPPAS+S+FD++SV ++ +Y R+L PL + KG +ELQRMGIGLV
Sbjct: 390 DMKTTISKFHIPPASMSSFDILSVAAFIFIYRRVLDPLVARIRKDPKGLTELQRMGIGLV 569
Query: 651 LSILAMVSAALVELKRLEIARSE 583
++I+AMVSA +VEL RL+ AR +
Sbjct: 570 IAIIAMVSAGIVELFRLKYARKD 638
Score = 89.0 bits (188), Expect(2) = 2e-051
Identities = 34/59 (57%), Positives = 47/59 (79%)
Frame = -2 / +3
Query: 567 KAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYI 391
++A +SILWQIPQY L+GA+EVF +GQ+EFF QAPD ++S SAL + ++SLGNY+
Sbjct: 651 ESASSLSILWQIPQYVLIGASEVFMYVGQLEFFNGQAPDGLKSFGSALCMTSISLGNYV 827
>gb|DN486886.1|DN486886 P071E05.3pR Populus petioles cDNA library Populus tremula cDNA
clone P071E05 3', mRNA sequence
Length = 812
Score = 193 bits (415), Expect(2) = 2e-051
Identities = 80/164 (48%), Positives = 108/164 (65%)
Frame = -2 / -3
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP S+S F + S++ + YDRILVP+ARKFTG E+G S L RMGIG V+SI A +
Sbjct: 756 SFQIPAGSMSVFTMTSMLTTIAFYDRILVPVARKFTGLERGISFLHRMGIGFVISIFATL 577
Query: 630 SAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPD 451
A VE+KR +A + GLI+ VP+ + W +PQY L G AE F IG +EFFYDQAP+
Sbjct: 576 VAGFVEIKRKHVASAHGLINSHQPVPIPVFWLVPQYCLHGIAEAFMSIGHLEFFYDQAPE 397
Query: 450 AMRSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDN 319
+MRS AL +S+GNY S++++TLV + W+PD+
Sbjct: 396 SMRSSAMALFWTAISVGNYASTLLVTLVHKFSAGSDGSNWLPDD 265
Score = 116 bits (248), Expect = 2e-025
Identities = 63/148 (42%), Positives = 83/148 (56%)
Frame = +2 / +2
Query: 368 TNVSMMELI*FPSETVISASALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCGICQRM 547
T V+ L *FP+E + SA+ LL+ SGA*S*KNS PI + SA P ++YCG Q+
Sbjct: 314 TKVTNSVLA*FPTEIAVQNSAIALLLILSGA*S*KNSKCPIDIKASAIP*RQYCGTSQKT 493
Query: 548 LIGTAAFS*MRPSDLAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGT 727
IGT + P A R ST+ A +A +D T PIPIRC P S PVN A+GT
Sbjct: 494 GIGTGW*ELISP*AEATCFRLISTKPATRVANIDMTKPIPIRCRKLIPRSSPVNLRATGT 673
Query: 728 RMRS*SGTHMMTLITSKVERDAGGMLKD 811
+MRS* + + K + + G+ KD
Sbjct: 674 KMRS*KAIVVSMEVMVKTDIEPAGI*KD 757
Score = 30.9 bits (61), Expect(2) = 2e-051
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 324 DNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIK 217
DNLN+G L+ F+WLI + + + CA + K
Sbjct: 267 DNLNKGKLEYFYWLITLLQVANLIYYLFCAKMYTFK 160
>gb|CV256310.1|CV256310 WS0243.B21_I03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_I03 3', mRNA sequence
Length = 973
Score = 101 bits (216), Expect(4) = 5e-051
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = -2 / -2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP ASL+ F V S+++ VP+YDRI+VP+AR+ +G + L+R+G+GLVLSI+AM+
Sbjct: 807 SFQIPAASLTVFFVGSILLTVPVYDRIIVPVARRVLKHPQGLTPLRRIGVGLVLSIVAMI 628
Query: 630 SAALVELKRLEIARSEGLIHEKAA 559
+AAL E KRL AR GL ++ A
Sbjct: 627 AAALTEKKRLRAARLHGLANDPTA 556
Score = 84.0 bits (177), Expect(4) = 5e-051
Identities = 30/70 (42%), Positives = 50/70 (71%)
Frame = -2 / -2
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A +P+S+ W +PQ+F VG+ E FT IGQ++FF + P M+++ + L L T+SLG ++SS
Sbjct: 558 AEIPLSVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSS 379
Query: 384 IILTLVSYIT 355
++T+V +T
Sbjct: 378 SLVTIVHKVT 349
Score = 62.5 bits (130), Expect(3) = 2e-023
Identities = 34/85 (40%), Positives = 45/85 (52%)
Frame = +2 / +2
Query: 557 TAAFS*MRPSDLAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMR 736
+A S +P +LA F S AA +A MD+T P P+R + P LA+GT +R
Sbjct: 554 SAVGSLAKPCNLAALSLFFSVSAAAIMATMDKTKPTPMRLNGVSPCGCLSTLLATGTIIR 733
Query: 737 S*SGTHMMTLITSKVERDAGGMLKD 811
S*+GT L T K DA G+ KD
Sbjct: 734 S*TGTVKRMLPTKKTVSDAAGIWKD 808
Score = 45.1 bits (92), Expect(3) = 2e-023
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +2 / +2
Query: 812 PMRLSRTMPCSMNMEEFWA*TALNMIAVAQMGNIXXXIFNS 934
PMR S + C WA*T N+ VAQMGNI IF S
Sbjct: 812 PMRRSMVVACDTENVVIWA*TVQNITVVAQMGNISITIFTS 934
Score = 39.6 bits (80), Expect(3) = 2e-023
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +2 / +2
Query: 353 VVMYDTNVSMMELI*FPSETVISASALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCG 532
+V T V+ EL P E V+ S + + + G K S+ PI V S PTKK CG
Sbjct: 347 IVTLCTIVTNEELTKNPRERVLRNSPVLIVFIPFGHSLRKKSSCPIYVKASPDPTKKNCG 526
Query: 533 ICQRMLIGTAA 565
Q L G +A
Sbjct: 527 TSQNTLSGISA 559
Score = 37.3 bits (75), Expect(4) = 5e-051
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 333 WIPDNLNEGHLDRFFWLIAGIS 268
W+ DNLN+G L F+WL+A +S
Sbjct: 336 WLADNLNQGRLHDFYWLLAILS 271
Score = 35.4 bits (71), Expect(4) = 5e-051
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1 / -1
Query: 928 EDXXXNVSHLGYCYHIQCCLCPKLFHVHRAGHGS*QAHWVFQHSSC 791
E+ NV+HLGY I CLCP H +HW ++C
Sbjct: 928 ENGNRNVAHLGYYCDILDCLCPNDHIFCVTSHHHGPSHWKIFPNTC 791
>gb|DT511341.1|DT511341 WS02416.B21_D08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_D08 3', mRNA sequence
Length = 907
Score = 190 bits (410), Expect(2) = 7e-051
Identities = 78/164 (47%), Positives = 108/164 (65%)
Frame = -2 / -3
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP S+S F + S++ + YDRILVP+A KFTG E+G S L RMGIG V+SI A +
Sbjct: 875 SFQIPAGSMSVFTMTSMLTTIAFYDRILVPVASKFTGLERGISFLHRMGIGFVISIFATL 696
Query: 630 SAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPD 451
A VE+KR +A + GLI+ + +P+ + W +PQY L G AE F IG +EFFYDQAP+
Sbjct: 695 VAGFVEIKRKHVASAHGLINSQQPIPIPVFWLVPQYCLHGIAEAFMSIGHLEFFYDQAPE 516
Query: 450 AMRSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDN 319
+MRS AL +S+GNY S++++TLV + W+PD+
Sbjct: 515 SMRSSAMALFWTAISVGNYASTLLVTLVHKFSAGSDGSNWLPDD 384
Score = 122 bits (260), Expect = 5e-027
Identities = 65/151 (43%), Positives = 86/151 (56%)
Frame = +2 / +1
Query: 368 TNVSMMELI*FPSETVISASALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCGICQRM 547
T V+ L *FP+E + SA+ LL+ SGA*S*KNS PI + SA P ++YCG Q+
Sbjct: 433 TKVTKSVLA*FPTEIAVQNSAIALLLILSGA*S*KNSKCPIDIKASAIP*RQYCGTSQKT 612
Query: 548 LIGTAAFS*MRPSDLAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGT 727
IG +RP A R ST+ A +A +D T PIPIRC P S PVN LA+GT
Sbjct: 613 GIGIGC*ELIRP*AEATCFRLISTKPATRVANIDMTKPIPIRCRKLIPRSSPVNLLATGT 792
Query: 728 RMRS*SGTHMMTLITSKVERDAGGMLKDPMR 820
+MRS* + + K + + G+ KD +R
Sbjct: 793 KMRS*KAIVVSMEVMVKTDIEPAGI*KDFVR 885
Score = 30.9 bits (61), Expect(2) = 7e-051
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2 / -3
Query: 324 DNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIK 217
DNLN+G L+ F+WLI + + + CA + K
Sbjct: 386 DNLNKGKLEYFYWLITLLQVANLIYYLFCAKMYTFK 279
>gb|DT504701.1|DT504701 WS01314.B21_G13 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01314_G13 3', mRNA sequence
Length = 911
Score = 173 bits (373), Expect(2) = 5e-048
Identities = 72/144 (50%), Positives = 96/144 (66%)
Frame = -2 / -2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP S+S F + S++ + YDRILVP+A KFTG E+G S L RMGIG V+SI A +
Sbjct: 451 SFQIPAGSMSVFTMTSMLTTIAFYDRILVPVASKFTGLERGISFLHRMGIGFVISIFATL 272
Query: 630 SAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPD 451
A VE+KR +A + GLI+ +P+ + W +PQY L G AE F IG +EFFYDQAP+
Sbjct: 271 VAGFVEIKRKHVASAHGLINSHQPIPIPVFWLVPQYCLHGIAEAFMSIGHLEFFYDQAPE 92
Query: 450 AMRSLCSALALITVSLGNYISSII 379
+MRS AL +S GNY S+++
Sbjct: 91 SMRSSAMALFWTAISFGNYASTLL 20
Score = 117 bits (251), Expect = 9e-026
Identities = 63/144 (43%), Positives = 83/144 (57%)
Frame = +2 / +3
Query: 389 LI*FPSETVISASALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCGICQRMLIGTAAF 568
L *FP+E + SA+ LL+ SGA*S*KNS PI + SA P ++YCG Q+ IG
Sbjct: 30 LA*FPNEIAVQNSAIALLLILSGA*S*KNSKCPIDIKASAIP*RQYCGTSQKTGIGIGW* 209
Query: 569 S*MRPSDLAISKRFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SG 748
+RP A R ST+ A +A +D T PIPIRC P S PVN LA+GT+MRS*
Sbjct: 210 ELIRP*AEATCFRLISTKPATRVANIDMTKPIPIRCRKLIPRSSPVNLLATGTKMRS*KA 389
Query: 749 THMMTLITSKVERDAGGMLKDPMR 820
+ + K + + G+ KD +R
Sbjct: 390 IVVSMEVMVKTDIEPAGI*KDFVR 461
Score = 38.2 bits (77), Expect(2) = 5e-048
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2 / -2
Query: 933 ELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRI 814
ELK M PIWA I+ YAQ ++ ++Q +D+ +
Sbjct: 577 ELKSIIRMGPIWAAGILLITAYAQQNTFSLQQAKSMDRHL 458
>gb|DT510380.1|DT510380 WS02426.BR_G05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_G05 5', mRNA sequence
Length = 864
Score = 121 bits (259), Expect(3) = 3e-047
Identities = 49/105 (46%), Positives = 72/105 (68%)
Frame = -2 / +2
Query: 888 IIFSAVYAQNSSMFIEQGMVLDKRIGSFNIPPASLSTFDVISVIMWVPLYDRILVPLARK 709
I+ + AQ S+ ++Q +D ++GS +PPASL F V+ ++M P+YD +++P ARK
Sbjct: 2 IMLNCCLAQLSTFSVQQADTMDTKLGSLKVPPASLPVFPVVFIMMLAPVYDHLIIPFARK 181
Query: 708 FTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLI 574
T E G + LQR+GIGLVLSI+AM AALVE+KR +A + GL+
Sbjct: 182 LTKSEMGITHLQRIGIGLVLSIIAMAVAALVEIKRKRVAANSGLV 316
Score = 75.3 bits (158), Expect(3) = 3e-047
Identities = 27/77 (35%), Positives = 52/77 (67%)
Frame = -2 / +2
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+P++ W QY +G+A++FT G +EFF+ +AP MRSL +L+ ++++G Y+SS+I
Sbjct: 323 LPITFFWIAFQYLFLGSADLFTLAGLLEFFFTEAPAGMRSLAMSLSWASLAMGYYLSSVI 502
Query: 378 LTLVSYITTQGGDPGWI 328
+++V+ +T + W+
Sbjct: 503 VSIVNNVTGNSKNRPWL 553
Score = 30.9 bits (61), Expect(3) = 3e-047
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -2 / +2
Query: 321 NLNEGHLDRFFWLIAGISFVD 259
N+N HL+RF+WL+ +S ++
Sbjct: 563 NINHHHLERFYWLLCVLSVLN 625
>gb|BP933327.1|BP933327 BP933327 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-049_O22.r 3', mRNA sequence
Length = 669
Score = 117 bits (251), Expect(2) = 2e-046
Identities = 44/99 (44%), Positives = 64/99 (64%)
Frame = -2 / -1
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PMS+ W +PQY + GAA+VF +G EFFYDQ P +RS+ +L L +G+++SS +
Sbjct: 396 IPMSVCWLVPQYIVYGAADVFAMVGLQEFFYDQVPSELRSVGLSLYLSIFGVGSFLSSFL 217
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFV 262
++ + T G W DNLN HLD F+WL+AG+S V
Sbjct: 216 ISGIEKATGGDGHGSWFADNLNRAHLDYFYWLLAGLSVV 100
Score = 89.0 bits (188), Expect(2) = 2e-046
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = -2 / -1
Query: 804 NIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSA 625
++P ASL + +S++ +P YDR+LVP AR T + G + LQR+G G+ LS L+MV +
Sbjct: 645 DVPAASLQSLIYLSIVFLIPFYDRVLVPTARAITRKPSGITMLQRIGTGIFLSALSMVLS 466
Query: 624 ALVELKRLEIARSEGLI 574
A+VE+KRL+ AR GL+
Sbjct: 465 AVVEMKRLKTAREYGLV 415
>gb|AJ778792.1|AJ778792 AJ778792 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600006C10F1, mRNA sequence
Length = 698
Score = 111 bits (236), Expect(2) = 2e-046
Identities = 38/97 (39%), Positives = 65/97 (67%)
Frame = -2 / +3
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
VP+SI W +PQY L+G +++FT +G EFFY + P MR++ AL +G+++S+++
Sbjct: 249 VPLSIFWLLPQYILLGISDIFTVVGMQEFFYSEVPVRMRTMGIALYTSVFGVGSFLSALL 428
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGIS 268
++LV Y T+ G W D++ E LD+++WL+A +S
Sbjct: 429 ISLVEYFTSSTGGKSWFSDDMREARLDKYYWLLALLS 539
Score = 95.5 bits (202), Expect(2) = 2e-046
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = -2 / +3
Query: 798 PPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAAL 619
PPA+L + +S+I+ +P YD +L+PLAR T EKG S +RMGIG+VLSI+AM AAL
Sbjct: 3 PPATLQSSITVSIILLMPFYDALLIPLARLITRDEKGISVTERMGIGMVLSIIAMAIAAL 182
Query: 618 VELKRLEIARSEGLIHEK 565
VE KRLEI + ++ +K
Sbjct: 183 VESKRLEIGQKMEVVDQK 236
>gb|DT477029.1|DT477029 WS01231.B21_L11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_L11 3', mRNA sequence
Length = 905
Score = 104 bits (222), Expect(3) = 4e-046
Identities = 40/92 (43%), Positives = 59/92 (64%)
Frame = -2 / -2
Query: 594 ARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALI 415
A + GLI+ + +P+ + W +PQY L G AE F IG +EFFYDQAP++MRS AL
Sbjct: 634 ASAHGLINSQQPIPIPVFWLVPQYCLHGIAEAFMSIGHLEFFYDQAPESMRSSAMALFWT 455
Query: 414 TVSLGNYISSIILTLVSYITTQGGDPGWIPDN 319
+S+GNY S++++TLV + W+PD+
Sbjct: 454 AISVGNYASTLLVTLVHKFSAGSDGSNWLPDD 359
Score = 88.6 bits (187), Expect(3) = 4e-046
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = -2 / -3
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP S+S F + S++ + YDRILVP+A KFTG E+G S L RMGIG V+SI A +
Sbjct: 849 SFQIPAGSMSVFTMTSMLTTIAFYDRILVPVASKFTGLERGISFLHRMGIGFVISIFATL 670
Query: 630 SAALVELKR 604
A VE+KR
Sbjct: 669 VAGFVEIKR 643
Score = 65.2 bits (136), Expect(2) = 2e-023
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +2 / +3
Query: 368 TNVSMMELI*FPSETVISASALHKLLMASGA*S*KNST*PIQVNTSAAPTKKYCGICQRM 547
T V+ L *FP+E + SA+ LL+ SGA*S*KNS PI + SA P ++YCG Q+
Sbjct: 408 TKVTKSVLA*FPTEIAVQNSAIALLLILSGA*S*KNSKCPIDIKASAIP*RQYCGTSQKT 587
Query: 548 LIGTAAFS*MRP 583
IG +RP
Sbjct: 588 GIGIGC*ELIRP 623
Score = 64.3 bits (134), Expect(2) = 2e-023
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2 / +2
Query: 605 RFNSTRAADTIARMDRTNPIPIRCSSEKPFSLPVNFLASGTRMRS*SGTHMMTLITSKVE 784
R ST+ A +A +D T PIPIRC P S PVN LA+GT+MRS* + + K +
Sbjct: 644 RLISTKPATRVANIDMTKPIPIRCRKLIPRSSPVNLLATGTKMRS*KAIVVSMEVMVKTD 823
Query: 785 RDAGGMLKDPMR 820
+ G+ KD +R
Sbjct: 824 IEPAGI*KDFVR 859
Score = 30.9 bits (61), Expect(3) = 4e-046
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2 / -2
Query: 324 DNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIK 217
DNLN+G L+ F+WLI + + + CA + K
Sbjct: 361 DNLNKGKLEYFYWLITLLQVANLIYYLFCAKMYTFK 254
>gb|CV253989.1|CV253989 WS0223.B21_K15 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0223_K15 3', mRNA sequence
Length = 765
Score = 101 bits (216), Expect(3) = 7e-046
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = -2 / -2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IP ASL+ F V S+++ VP+YDRI+VP+AR+ +G + L+R+G+GLVLSI+AM+
Sbjct: 752 SFQIPAASLTVFFVGSILLTVPVYDRIIVPVARRVLKHPQGLTPLRRIGVGLVLSIVAMI 573
Query: 630 SAALVELKRLEIARSEGLIHEKAA 559
+AAL E KRL AR GL ++ A
Sbjct: 572 AAALTEKKRLRAARLHGLANDPTA 501
Score = 84.0 bits (177), Expect(3) = 7e-046
Identities = 30/70 (42%), Positives = 50/70 (71%)
Frame = -2 / -2
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A +P+S+ W +PQ+F VG+ E FT IGQ++FF + P M+++ + L L T+SLG ++SS
Sbjct: 503 AEIPLSVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSS 324
Query: 384 IILTLVSYIT 355
++T+V +T
Sbjct: 323 SLVTIVHKVT 294
Score = 37.3 bits (75), Expect(3) = 7e-046
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 333 WIPDNLNEGHLDRFFWLIAGIS 268
W+ DNLN+G L F+WL+A +S
Sbjct: 281 WLADNLNQGRLHDFYWLLAILS 216
>gb|DN488268.1|DN488268 R045E02.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R045E02 3', mRNA sequence
Length = 624
Score = 178 bits (384), Expect = 4e-044
Identities = 70/110 (63%), Positives = 88/110 (80%)
Frame = -2 / -3
Query: 543 LWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVS 364
LWQIPQY L+G AE+FT IGQ+EFFY+Q+PDAMRSLCSALAL+ SLG+Y+SS IL++V+
Sbjct: 622 LWQIPQYMLIGTAEIFTYIGQLEFFYEQSPDAMRSLCSALALLAASLGSYLSSFILSMVT 443
Query: 363 YITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIKK 214
Y+TT GG GW+PDNLN GHLD FWL+AG+SF + + CA + KK
Sbjct: 442 YLTTTGGKTGWVPDNLNTGHLDYLFWLLAGLSFFNLLIYIVCAKRYKEKK 293
>gb|DN501803.1|DN501803 V030E09.5pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V030E09 5', mRNA sequence
Length = 832
Score = 88.6 bits (187), Expect(3) = 3e-043
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -2 / -2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
+F IPPAS+ + + +I+ V +YD+ILVP R+ TG E+G S L+R+G GL+ S++AM
Sbjct: 561 NFEIPPASIFSLSAVGMIISVVIYDKILVPFLRRATGNERGISVLKRIGSGLIFSVVAMS 382
Query: 630 SAALVELKRLEIARSE 583
AALVE KR +IA +
Sbjct: 381 VAALVERKRQKIAEED 334
Score = 85.8 bits (181), Expect(3) = 3e-043
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = -2 / -2
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PMS+ W PQ+ ++G + FT +G EFFYDQ PD+MRSL A L + GN++SS +
Sbjct: 300 LPMSVFWLAPQFLILGLGDGFTLVGLQEFFYDQVPDSMRSLGMAFFLSVLGAGNFLSSFL 121
Query: 378 LTLVSYITTQGG 343
+T V IT + G
Sbjct: 120 ITAVDRITEKDG 85
Score = 40.0 bits (81), Expect(3) = 3e-043
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2 / -2
Query: 354 TQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
T+ GWI +LN LD+F+WL+A I+ V+
Sbjct: 99 TEKDGKGWIGKDLNSSRLDKFYWLLAAINSVN 4
>gb|CK114054.1|CK114054 V030E09 Populus male catkins cDNA library Populus trichocarpa cDNA
clone V030E09 5', mRNA sequence
Length = 817
Score = 88.6 bits (187), Expect(3) = 3e-043
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -2 / -2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
+F IPPAS+ + + +I+ V +YD+ILVP R+ TG E+G S L+R+G GL+ S++AM
Sbjct: 561 NFEIPPASIFSLSAVGMIISVVIYDKILVPFLRRATGNERGISVLKRIGSGLIFSVVAMS 382
Query: 630 SAALVELKRLEIARSE 583
AALVE KR +IA +
Sbjct: 381 VAALVERKRQKIAEED 334
Score = 85.8 bits (181), Expect(3) = 3e-043
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = -2 / -2
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PMS+ W PQ+ ++G + FT +G EFFYDQ PD+MRSL A L + GN++SS +
Sbjct: 300 LPMSVFWLAPQFLILGLGDGFTLVGLQEFFYDQVPDSMRSLGMAFFLSVLGAGNFLSSFL 121
Query: 378 LTLVSYITTQGG 343
+T V IT + G
Sbjct: 120 ITAVDRITEKDG 85
Score = 40.0 bits (81), Expect(3) = 3e-043
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2 / -2
Query: 354 TQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
T+ GWI +LN LD+F+WL+A I+ V+
Sbjct: 99 TEKDGKGWIGKDLNSSRLDKFYWLLAAINSVN 4
>gb|AJ777952.1|AJ777952 AJ777952 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400037C12F1, mRNA sequence
Length = 665
Score = 84.9 bits (179), Expect(3) = 2e-042
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = -2 / +1
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PMS W IPQ L+GAA+VFT IG EFFYDQ P +RS+ AL L + +GN++SS +
Sbjct: 274 IPMSAWWLIPQNVLLGAADVFTMIGMQEFFYDQVPSELRSVGLALFLSVIGVGNFLSSFL 453
Query: 378 LTLVSYITTQG 346
++++ +G
Sbjct: 454 ISIIDKAXRRG 486
Score = 84.9 bits (179), Expect(3) = 2e-042
Identities = 38/75 (50%), Positives = 51/75 (68%)
Frame = -2 / +1
Query: 798 PPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAAL 619
P AS+ F +V++ V +YDR VP+AR TG G + LQR+G G+ LS LAMV AA+
Sbjct: 31 PAASVQLFIPATVVVLVAIYDRAFVPVARALTGEPSGITMLQRIGTGVFLSFLAMVVAAV 210
Query: 618 VELKRLEIARSEGLI 574
VE+KRLE A+ GL+
Sbjct: 211 VEMKRLEKAQQYGLV 255
Score = 41.8 bits (85), Expect(3) = 2e-042
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2 / +2
Query: 360 ITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFV 262
+T G W +NLN HLD F+WL+A +S V
Sbjct: 473 LTGGDGHYSWFANNLNRAHLDYFYWLLAALSAV 571
>gb|BU877149.1|BU877149 V030bE09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 615
Score = 88.6 bits (187), Expect(3) = 3e-042
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -2 / -3
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
+F IPPAS+ + + +I+ V +YD+ILVP R+ TG E+G S L+R+G GL+ S++AM
Sbjct: 541 NFEIPPASIFSLSAVGMIISVVIYDKILVPFLRRATGNERGISVLKRIGSGLIFSVVAMS 362
Query: 630 SAALVELKRLEIARSE 583
AALVE KR +IA +
Sbjct: 361 VAALVERKRQKIAEED 314
Score = 85.8 bits (181), Expect(3) = 3e-042
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = -2 / -3
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PMS+ W PQ+ ++G + FT +G EFFYDQ PD+MRSL A L + GN++SS +
Sbjct: 280 LPMSVFWLAPQFLILGLGDGFTLVGLQEFFYDQVPDSMRSLGMAFFLSVLGAGNFLSSFL 101
Query: 378 LTLVSYITTQGG 343
+T V IT + G
Sbjct: 100 ITAVDRITEKDG 65
Score = 36.3 bits (73), Expect(3) = 3e-042
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2 / -3
Query: 354 TQGGDPGWIPDNLNEGHLDRFFWLIA 277
T+ GWI +LN LD+F+WL+A
Sbjct: 79 TEKDGKGWIGKDLNSSRLDKFYWLLA 2
>gb|BI128232.1|BI128232 G072P94Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 547
Score = 143 bits (307), Expect(2) = 8e-042
Identities = 55/80 (68%), Positives = 68/80 (85%)
Frame = -2 / -2
Query: 474 FFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDNLNEGHLDR 295
FFY+++PDAMRSLCSAL+L+T SLGNY+SS ILT+V+Y TT GG PGWIPDNLNEGHLD
Sbjct: 474 FFYEESPDAMRSLCSALSLLTTSLGNYLSSFILTMVTYFTTTGGKPGWIPDNLNEGHLDY 295
Query: 294 FFWLIAGISFVDPPPPMGCA 235
FFWL+AG+S ++ + CA
Sbjct: 294 FFWLLAGLSVLNMLVYVFCA 235
Score = 47.8 bits (98), Expect(2) = 8e-042
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 546 ILWQIPQYFLVGAAEVFTCIGQVE 475
I WQIPQY LVGA+EVFT IGQ++
Sbjct: 545 IFWQIPQYMLVGASEVFTFIGQMD 474
>gb|CA931540.1|CA931540 MTU2TA.P8.G03 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 494
Score = 110 bits (235), Expect(2) = 1e-041
Identities = 43/97 (44%), Positives = 61/97 (62%)
Frame = -2 / +3
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PMSI W IPQY G AE FT +G EFFYDQ P +RS+ +L L +G+++SS +
Sbjct: 201 IPMSIWWLIPQYV*FGVAEAFTMVGLQEFFYDQVPSDLRSVGLSLYLSIFGVGSFLSSFL 380
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGIS 268
++++ T G W +NLN HL F+WL+AG+S
Sbjct: 381 ISIIEKATGGNGRYSWFANNLNRAHLGYFYWLLAGLS 491
Score = 79.9 bits (168), Expect(2) = 1e-041
Identities = 30/60 (50%), Positives = 47/60 (78%)
Frame = -2 / +3
Query: 753 WVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLI 574
++P+YDR+LVP+AR T + G + LQR+G G+ +S++AM+ AALVE+KRL+ A+ GL+
Sbjct: 3 FIPIYDRVLVPIARALTRKPSGITMLQRIGSGMFISVVAMIVAALVEVKRLKTAQEHGLV 182
>gb|BU897479.1|BU897479 X058E02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 509
Score = 97.7 bits (207), Expect(2) = 2e-040
Identities = 42/74 (56%), Positives = 55/74 (74%)
Frame = -2 / +2
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IPPA+L + +S+I+ +P Y+ +L+PLAR T EKG S +RMGIG+VLSI+AM
Sbjct: 11 SFKIPPATLQSSITVSIILLMPFYEALLIPLARLITRDEKGISVTERMGIGMVLSIIAMA 190
Query: 630 SAALVELKRLEIAR 589
AALVE KRLEI +
Sbjct: 191 IAALVETKRLEIGQ 232
Score = 89.0 bits (188), Expect(2) = 2e-040
Identities = 31/80 (38%), Positives = 52/80 (65%)
Frame = -2 / +2
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
VP+SI W +PQY L+G +++FT +G EFFY + P MR++ AL +G+++S+++
Sbjct: 269 VPLSIFWLLPQYILLGISDIFTVVGMQEFFYSEVPVRMRTMGIALHTSVFGVGSFLSALL 448
Query: 378 LTLVSYITTQGGDPGWIPDN 319
++LV Y T+ G W D+
Sbjct: 449 ISLVEYFTSSTGGKSWFSDD 508
>gb|CF233550.1|CF233550 PtaJXO0024H3H0315 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 495
Score = 115 bits (246), Expect(4) = 2e-039
Identities = 45/73 (61%), Positives = 59/73 (80%)
Frame = -2 / +3
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IP ASLS FD +SVI W P+YDRI+VP ARKFTG E+GF++LQRMGIGLV+S+++M+
Sbjct: 168 FKIPSASLSLFDTLSVIFWAPVYDRIIVPYARKFTGHERGFTQLQRMGIGLVISLVSMIV 347
Query: 627 AALVELKRLEIAR 589
A ++E+ RL R
Sbjct: 348 AGVLEVVRLNFVR 386
Score = 50.6 bits (104), Expect(4) = 2e-039
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = -2 / +3
Query: 948 VXXXXELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRIG 811
V LK + P+WA+ I+F+ VY+Q S+MF+ QG +D+ +G
Sbjct: 24 VTQVEXLKSIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMG 161
Score = 29.0 bits (57), Expect(4) = 2e-039
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +1
Query: 531 PQYFLVGAAEVF 496
PQYFL+G AEVF
Sbjct: 442 PQYFLIGCAEVF 477
Score = 24.0 bits (46), Expect(4) = 2e-039
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 558 VPMSILWQIP 529
+PM+I WQ+P
Sbjct: 414 IPMTIFWQVP 443
>gb|BU886438.1|BU886438 R045E02 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 589
Score = 159 bits (341), Expect = 3e-038
Identities = 63/102 (61%), Positives = 81/102 (79%)
Frame = -2 / +3
Query: 519 LVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITTQGGD 340
L+G AE+FT IGQ+EFFY+Q+PDAMRSLCSALAL+ SLG+Y+SS IL++V+Y+TT GG
Sbjct: 6 LIGTAEIFTYIGQLEFFYEQSPDAMRSLCSALALLAASLGSYLSSFILSMVTYLTTTGGK 185
Query: 339 PGWIPDNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIKK 214
GW+PDNLN GHLD FWL+AG+SF + + CA + KK
Sbjct: 186 TGWVPDNLNTGHLDYLFWLLAGLSFFNLLIYIVCAKRYKEKK 311
>gb|CV268374.1|CV268374 WS0205.B21_E21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_E21 3', mRNA sequence
Length = 710
Score = 85.4 bits (180), Expect(3) = 3e-036
Identities = 31/66 (46%), Positives = 48/66 (72%)
Frame = -2 / -3
Query: 552 MSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILT 373
MS+ W PQ+FL+G+AEVFT +GQ+EFFYD+A D RS+ SA+ L + +G++ S+ I+
Sbjct: 549 MSVFWLFPQFFLIGSAEVFTYVGQLEFFYDEATDGTRSISSAVFLSEIGIGSWFSTAIVK 370
Query: 372 LVSYIT 355
++ T
Sbjct: 369 IIESAT 352
Score = 64.3 bits (134), Expect(3) = 3e-036
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = -2 / -3
Query: 738 DRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGL 577
++++VP+ RK TG +G + LQR+G+GL +SI A+++AALVE KR + G+
Sbjct: 708 EKVIVPILRKRTGHTRGITSLQRIGVGLFISIFALIAAALVEKKRRDCPNPSGM 547
Score = 40.9 bits (83), Expect(3) = 3e-036
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -2 / -3
Query: 354 TQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
T G D GW+ +NLN+ LD F+W++ I+ V+
Sbjct: 354 TGGEDKGWLRNNLNKSRLDYFYWVLTVINAVN 259
>gb|CK318837.1|CK318837 X9P03h07 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 592
Score = 150 bits (323), Expect = 1e-035
Identities = 62/122 (50%), Positives = 86/122 (70%)
Frame = -2 / +1
Query: 624 ALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAM 445
A++ EI R + +I +SI WQIPQY LVGA+EVF IGQ+EFF QAPD +
Sbjct: 19 AMLAAGATEIERLKNVIEGHKVSSLSIFWQIPQYVLVGASEVFMYIGQLEFFNGQAPDGI 198
Query: 444 RSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISF 265
+S S+L + ++SLGNY SS+++ +V ITT+G PGWIPD+LN GH+DRF++LIA ++
Sbjct: 199 KSFGSSLCMASISLGNYASSMLVNMVMKITTKGDKPGWIPDDLNTGHMDRFYFLIAVLTA 378
Query: 264 VD 259
D
Sbjct: 379 FD 384
>gb|CF237321.1|CF237321 Ptajxtjxt4F7F0711 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 525
Score = 148 bits (317), Expect = 7e-035
Identities = 56/81 (69%), Positives = 73/81 (90%)
Frame = -2 / +3
Query: 501 VFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPD 322
VFT IGQ+EFFYDQAPDAMRSLCSAL+L TV+LGNY+S++++T+V+ +TT+GG GWIPD
Sbjct: 3 VFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTLLVTIVTKVTTRGGKLGWIPD 182
Query: 321 NLNEGHLDRFFWLIAGISFVD 259
NLN GHLD F+WL+A +SF++
Sbjct: 183 NLNRGHLDYFYWLLAILSFLN 245
>gb|CV243431.1|CV243431 WS02518.B21_N18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02518_N18 3', mRNA sequence
Length = 854
Score = 148 bits (317), Expect = 7e-035
Identities = 57/103 (55%), Positives = 82/103 (79%)
Frame = -2 / -3
Query: 567 KAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYIS 388
++A +SILWQIPQY L+GA+EVF +GQ+EFF QAPD ++S SAL + ++SLGNY+S
Sbjct: 846 ESASSLSILWQIPQYVLIGASEVFMYVGQLEFFNGQAPDGLKSFGSALCMTSISLGNYVS 667
Query: 387 SIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
S+++T+V I+T+ PGWIP NLN+GHLDRF++L+A ++ D
Sbjct: 666 SLLVTVVMKISTRDEMPGWIPGNLNKGHLDRFYFLLAVLTTAD 538
>gb|DN492511.1|DN492511 X024D04.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X024D04 3', mRNA sequence
Length = 838
Score = 83.1 bits (175), Expect(4) = 9e-035
Identities = 29/73 (39%), Positives = 48/73 (65%)
Frame = -2 / -3
Query: 561 AVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSI 382
++ MS+ W PQ+ ++G + FT +G E+FYDQ PD+MRSL A L + N+ISS+
Sbjct: 521 SLSMSVFWLAPQFIIIGVGDAFTLVGLQEYFYDQVPDSMRSLGIAFYLSVIGAANFISSL 342
Query: 381 ILTLVSYITTQGG 343
++T + ++T + G
Sbjct: 341 LITAIDHVTGRFG 303
Score = 54.2 bits (112), Expect(4) = 9e-035
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = -2 / -3
Query: 723 PLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSE 583
P R+ TG E+G LQR+GIG++ SI MV++ALVE KRL + +
Sbjct: 674 PGVRRATGNERGIKILQRIGIGMLFSISTMVASALVERKRLGVVEKD 534
Score = 33.1 bits (66), Expect(4) = 9e-035
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2 / -3
Query: 333 WIPDNLNEGHLDRFFWLIAGI 271
W +LN LD F+WLIAG+
Sbjct: 296 WFGKDLNSSRLDYFYWLIAGM 234
Score = 32.7 bits (65), Expect(4) = 9e-035
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 801 IPPASLSTFDVISVIMWVPLYDRILVPL 718
IPPAS+ +I+ V +Y++ILVP+
Sbjct: 751 IPPASIFALSAFGMIIAVAIYEKILVPV 668
>gb|CK318972.1|CK318972 X9P05d12 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 693
Score = 85.8 bits (181), Expect(2) = 1e-034
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = -2 / +2
Query: 567 KAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYIS 388
K ++ MS+ W PQ+ ++G + FT +G E+FYDQ PD+MRSL A L + N++S
Sbjct: 374 KGSLSMSVFWLAPQFIIIGVGDAFTLVGLQEYFYDQVPDSMRSLGIAFYLSVIGAANFLS 553
Query: 387 SIILTLVSYITTQGG 343
S+++T V ++T + G
Sbjct: 554 SLLITAVDHVTEKTG 598
Score = 81.7 bits (172), Expect(2) = 1e-034
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = -2 / +2
Query: 807 FNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVS 628
F IPPAS+ I +I+ V +Y++ILVP+ R+ TG E+G LQR+G G++ SI MV
Sbjct: 143 FQIPPASVYALAAIGMIVSVTIYEKILVPVLRRATGNERGIKILQRIGFGMLFSISTMVV 322
Query: 627 AALVELKRLEIARSE 583
+ALVE KRL + +
Sbjct: 323 SALVERKRLGVVAKD 367
>gb|BP935099.1|BP935099 BP935099 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-073_K09.r 3', mRNA sequence
Length = 528
Score = 117 bits (251), Expect(2) = 3e-034
Identities = 44/99 (44%), Positives = 64/99 (64%)
Frame = -2 / -3
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+PMS+ W +PQY + GAA+VF +G EFFYDQ P +RS+ +L L +G+++SS +
Sbjct: 397 IPMSVCWLVPQYIVYGAADVFAMVGLQEFFYDQVPSELRSVGLSLYLSIFGVGSFLSSFL 218
Query: 378 LTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFV 262
++ + T G W DNLN HLD F+WL+AG+S V
Sbjct: 217 ISGIEKATGGDGHGSWFADNLNRAHLDYFYWLLAGLSVV 101
Score = 48.3 bits (99), Expect(2) = 3e-034
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = -2 / -3
Query: 684 SELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLI 574
S LQR+G G+ LS L+MV +A+VE+KRL+ AR GL+
Sbjct: 526 SMLQRIGTGIFLSALSMVLSAVVEMKRLKTAREYGLV 416
>gb|CV236599.1|CV236599 WS01224.B21.1_L02 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01224_L02 3', mRNA sequence
Length = 881
Score = 81.3 bits (171), Expect(3) = 8e-034
Identities = 30/66 (45%), Positives = 48/66 (72%)
Frame = -2 / -2
Query: 552 MSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILT 373
+S W +PQYFLVGA E F +GQ+EFF +AP+ M+S+ + L L ++S+G ++SS++++
Sbjct: 697 ISAFWLVPQYFLVGAGEAFVYVGQLEFFIREAPERMKSMSTGLFLSSISMGFFVSSLLVS 518
Query: 372 LVSYIT 355
LV T
Sbjct: 517 LVDKAT 500
Score = 67.0 bits (140), Expect(3) = 8e-034
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -2 / -2
Query: 756 MWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLE 598
++ L +R+ +PLARK T +G + LQR+GIGL LSILAMV+AA++E +R E
Sbjct: 880 LFTSLNERLFIPLARKLTRNAQGLTSLQRIGIGLFLSILAMVAAAIIEKERRE 722
Score = 34.1 bits (68), Expect(3) = 8e-034
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -2 / -2
Query: 333 WIPDNLNEGHLDRFFWLIAGISFVD 259
W+ NLN+G L+ F+W++A + ++
Sbjct: 490 WLRSNLNKGRLNNFYWMLAVLGLLN 416
>gb|DT515006.1|DT515006 WS02426.B21_G05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_G05 3', mRNA sequence
Length = 868
Score = 75.3 bits (158), Expect(4) = 7e-033
Identities = 27/77 (35%), Positives = 52/77 (67%)
Frame = -2 / -2
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSII 379
+P++ W QY +G+A++FT G +EFF+ +AP MRSL +L+ ++++G Y+SS+I
Sbjct: 672 LPITFFWIAFQYLFLGSADLFTLAGLLEFFFTEAPAGMRSLAMSLSWASLAMGYYLSSVI 493
Query: 378 LTLVSYITTQGGDPGWI 328
+++V+ +T + W+
Sbjct: 492 VSIVNNVTGNSKNRPWL 442
Score = 62.0 bits (129), Expect(4) = 7e-033
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = -2 / -2
Query: 711 KFTGREKGFSELQRMGIGLVLSILAMVSAALVELKRLEIARSEGLI 574
K T E G + LQR+GIGLVLSI+AM AALVE+KR +A + GL+
Sbjct: 816 KLTKSEMGITHLQRIGIGLVLSIIAMAVAALVEIKRKRVAANSGLV 679
Score = 30.9 bits (61), Expect(4) = 7e-033
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -2 / -2
Query: 321 NLNEGHLDRFFWLIAGISFVD 259
N+N HL+RF+WL+ +S ++
Sbjct: 432 NINHHHLERFYWLLCVLSVLN 370
Score = 28.6 bits (56), Expect(4) = 7e-033
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 762 VIMWVPLYDRILVPLARK 709
++M P+YD +++P ARK
Sbjct: 868 IMMLAPVYDHLIIPFARK 815
>gb|CK102311.1|CK102311 G072P94.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G072P94 5', mRNA sequence
Length = 507
Score = 121 bits (258), Expect(2) = 4e-032
Identities = 48/77 (62%), Positives = 59/77 (76%)
Frame = -2 / -1
Query: 438 LCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
LCSAL+L+T SLGNY+SS ILT+V+Y TT GG PGWIPDNLNEGHLD FFWL+AG+S ++
Sbjct: 423 LCSALSLLTTSLGNYLSSFILTMVTYFTTTGGKPGWIPDNLNEGHLDYFFWLLAGLSVLN 244
Query: 258 PPPPMGCAVLLQIKKKP 208
+ CA + K P
Sbjct: 243 MLVYVFCARKTESSKSP 193
Score = 37.7 bits (76), Expect(2) = 4e-032
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = -2 / -3
Query: 489 IGQVEFFYDQAPDAMRS 439
IGQ+EFFY+++PDAMRS
Sbjct: 475 IGQMEFFYEESPDAMRS 425
>gb|CN521995.1|CN521995 GQ0123.B3_K15 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0123_K15 5', mRNA sequence
Length = 454
Score = 95.5 bits (202), Expect(2) = 7e-032
Identities = 40/83 (48%), Positives = 60/83 (72%)
Frame = -2 / +2
Query: 846 IEQGMVLDKRIGSFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRM 667
IEQ +++++GS IP S STF I+++++ L +R+ +PLARK T +G + LQR+
Sbjct: 14 IEQATFMNRKVGSLVIPSGSYSTFLFITILLFTSLNERLFIPLARKLTRNAQGLTSLQRI 193
Query: 666 GIGLVLSILAMVSAALVELKRLE 598
GIGL LSILAMV+AA++E +R E
Sbjct: 194 GIGLFLSILAMVAAAIIEKERRE 262
Score = 62.5 bits (130), Expect(2) = 7e-032
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = -2 / +2
Query: 552 MSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
+S W +PQYFLVGA F +GQ+EFF +AP+ M+S+ L ++S + SS
Sbjct: 287 ISAFWLVPQYFLVGAGXXFVYVGQLEFFIREAPERMKSMSXXXFLSSISXXXFXSS 454
>gb|DN497951.1|DN497951 R045E02.5pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R045E02 5', mRNA sequence
Length = 849
Score = 136 bits (292), Expect = 2e-031
Identities = 56/106 (52%), Positives = 76/106 (71%)
Frame = -2 / +2
Query: 531 PQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITT 352
P Y + ++ + Q+EFFY+Q+P AMRSLCSALAL+ SLG+Y+SS IL++V+Y+TT
Sbjct: 17 PVYVDRYSRHLYMTLVQLEFFYEQSPHAMRSLCSALALLAASLGSYLSSFILSMVTYLTT 196
Query: 351 QGGDPGWIPDNLNEGHLDRFFWLIAGISFVDPPPPMGCAVLLQIKK 214
GG GW+PDNLN GHLD FWL+AG+SF + + CA + KK
Sbjct: 197 TGGKTGWVPDNLNTGHLDYLFWLLAGLSFFNLLIYIVCAKRYKEKK 334
>gb|CK094628.1|CK094628 I045P63.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I045P63 3', mRNA sequence
Length = 728
Score = 136 bits (291), Expect = 3e-031
Identities = 54/94 (57%), Positives = 73/94 (77%)
Frame = -2 / -1
Query: 540 WQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSY 361
WQIPQY LVGA+EVF IGQ+EFF QAPD + S S+L + ++SLGNY SS+++ +V
Sbjct: 725 WQIPQYVLVGASEVFMYIGQLEFFNGQAPDGI*SFGSSLCMASISLGNYSSSMLVNMVMK 546
Query: 360 ITTQGGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
I+T+G PGWIPD+LN GH+DRF++LIA ++ D
Sbjct: 545 ISTKGDKPGWIPDDLNTGHMDRFYFLIAVLTAFD 444
>gb|BP933680.1|BP933680 BP933680 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-055_C05.r 3', mRNA sequence
Length = 666
Score = 84.0 bits (177), Expect(3) = 8e-031
Identities = 30/70 (42%), Positives = 50/70 (71%)
Frame = -2 / -3
Query: 564 AAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISS 385
A +P+S+ W +PQ+F VG+ E FT IGQ++FF + P M+++ + L L T+SLG ++SS
Sbjct: 553 AEIPLSVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTISTGLFLSTLSLGFFVSS 374
Query: 384 IILTLVSYIT 355
++T+V +T
Sbjct: 373 SLVTIVHKVT 344
Score = 51.0 bits (105), Expect(3) = 8e-031
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 672 RMGIGLVLSILAMVSAALVELKRLEIARSEGLIHEKAA 559
R+G+GLVLSI+AM++AAL E KRL AR GL ++ A
Sbjct: 664 RIGVGLVLSIVAMIAAALTEKKRLRAARLHGLANDPTA 551
Score = 37.3 bits (75), Expect(3) = 8e-031
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 333 WIPDNLNEGHLDRFFWLIAGIS 268
W+ DNLN+G L F+WL+A +S
Sbjct: 331 WLSDNLNQGRLHDFYWLLAILS 266
>gb|DN491861.1|DN491861 V030E09.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V030E09 3', mRNA sequence
Length = 622
Score = 88.6 bits (187), Expect(2) = 4e-030
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -2 / +3
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
+F IPPAS+ + + +I+ V +YD+ILVP R+ TG E+G S L+R+G GL+ S++AM
Sbjct: 234 NFEIPPASIFSLSAVGMIISVVIYDKILVPFLRRATGNERGISVLKRIGSGLIFSVVAMS 413
Query: 630 SAALVELKRLEIARSE 583
AALVE KR +IA +
Sbjct: 414 VAALVERKRQKIAEED 461
Score = 63.4 bits (132), Expect(2) = 4e-030
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = -2 / +3
Query: 558 VPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQAPDAMRSL 436
+PMS+ W PQ+ ++G + FT +G EFFYDQ PD+MRSL
Sbjct: 495 LPMSVFWLAPQFLILGLGDGFTLVGLQEFFYDQVPDSMRSL 617
>gb|DN492909.1|DN492909 X045E07.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X045E07 3', mRNA sequence
Length = 801
Score = 88.6 bits (187), Expect(3) = 1e-029
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = -2 / -1
Query: 810 SFNIPPASLSTFDVISVIMWVPLYDRILVPLARKFTGREKGFSELQRMGIGLVLSILAMV 631
SF IPPASL + I +I VPLY+ + VP AR+ TG++ G + LQR+G+GL ++ +MV
Sbjct: 552 SFKIPPASLQSIPYIMLIFVVPLYETVFVPFARRITGKDSGITPLQRVGVGLFIATFSMV 373
Query: 630 SAALVELKR 604
SAA++E KR
Sbjct: 372 SAAVIERKR 346
Score = 46.4 bits (95), Expect(3) = 1e-029
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -2 / -1
Query: 552 MSILWQIPQYFLVGAAEVFTCIGQVEFFYDQA 457
+SI W PQ+ + G +E+FT +G +EFFY Q+
Sbjct: 315 LSIFWIAPQFLIFGLSEMFTAVGLIEFFYKQS 220
Score = 33.6 bits (67), Expect(3) = 1e-029
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2 / -1
Query: 948 VXXXXELKXXXXMFPIWATAIIFSAVYAQNSSMFIEQGMVLDKRI 814
V ++K + PI++ IIF+ + AQ + ++QG ++ RI
Sbjct: 693 VAQVEQVKILISVIPIFSCTIIFNTILAQLQTFSVQQGSAMNTRI 559
>gb|DN491209.1|DN491209 UM73TH07.3pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM73TH07 3', mRNA sequence
Length = 780
Score = 127 bits (272), Expect(2) = 2e-029
Identities = 49/90 (54%), Positives = 71/90 (78%)
Frame = -2 / -1
Query: 528 QYFLVGAAEVFTCIGQVEFFYDQAPDAMRSLCSALALITVSLGNYISSIILTLVSYITTQ 349
QY L+GA+EVF +GQ+EFF QAPD ++S SAL + ++SLGNY+SS+++T+V I+T+
Sbjct: 702 QYALIGASEVFMYVGQLEFFNGQAPDGLKSFGSALCMTSISLGNYVSSLLVTVVMKISTR 523
Query: 348 GGDPGWIPDNLNEGHLDRFFWLIAGISFVD 259
PGWIP NLN+GHLDRF++L+A ++ D
Sbjct: 522 DEMPGWIPGNLNKGHLDRFYFLLAVLTTAD 433
Score = 22.1 bits (42), Expect(2) = 2e-029
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2 / -3
Query: 567 KAAVPMSILWQIP 529
K +SILWQIP
Sbjct: 742 KVRSSLSILWQIP 704
>gb|DT519713.1|DT519713 WS02443.B21_H08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02443_H08 3', mRNA sequence
Length = 888
Score = 121 bits (259), Expect(2) = 7e-027
Identities = 48/126 (38%), Positives = 81/126 (64%)
Frame = -2 / -1
Query: 636 MVSAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQA 457
+VSA + ++R + R L + A + MS +W +PQY L G AE F IGQ EF+Y +
Sbjct: 804 VVSAIVESIRRRKAIREGYLNNAHAVLDMSAMWLVPQYCLNGLAEAFNAIGQTEFYYSEF 625
Query: 456 PDAMRSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
P +M S+ +AL + +++ N ++S IL+ V +T++GG W+ +N+N+GH D ++WL+A
Sbjct: 624 PKSMSSIAAALFGLGMAVANLLASAILSAVDKLTSRGGKESWVSNNINKGHYDNYYWLLA 445
Query: 276 GISFVD 259
+S V+
Sbjct: 444 IMSSVN 427
Score = 22.6 bits (43), Expect(2) = 7e-027
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 149 YQIQMHCTDFMKKKKK 102
Y +M C ++ KKKKK
Sbjct: 48 YIKEMQCLEWKKKKKK 1
>gb|CK097430.1|CK097430 UB50DPG05.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB50DPG05 3', mRNA sequence
Length = 866
Score = 121 bits (259), Expect = 7e-027
Identities = 48/126 (38%), Positives = 81/126 (64%)
Frame = -2 / -3
Query: 636 MVSAALVELKRLEIARSEGLIHEKAAVPMSILWQIPQYFLVGAAEVFTCIGQVEFFYDQA 457
+VSA + ++R + R L + A + MS +W +PQ+ L G AE F IGQ EF+Y +
Sbjct: 651 VVSAIVESIRRRKAIREGYLNNAHAVLDMSAMWLVPQHCLNGLAEAFNAIGQTEFYYSEF 472
Query: 456 PDAMRSLCSALALITVSLGNYISSIILTLVSYITTQGGDPGWIPDNLNEGHLDRFFWLIA 277
P +M S+ +AL + +++ N ++S IL+ V +T++GG W+ DN+N+GH D ++WL+A
Sbjct: 471 PKSMSSIAAALFGLGMAVANLLASAILSAVDKLTSRGGKESWVSDNINKGHYDNYYWLLA 292
Query: 276 GISFVD 259
+S V+
Sbjct: 291 IMSSVN 274
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 518,898,189
Number of Sequences: 369679
Number of extensions: 8001710
Number of successful extensions: 49540
Number of sequences better than 1.0e-020: 76
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 14029081191
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)