TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591248.2.1
(1222 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT513650.1|DT513650 WS02422.B21_K01 PTxD-ICC-N-A-14 Popu... 249 e-122
gb|DT525548.1|DT525548 WS02045.C21_K07 PTxN-IB-N-A-11 Popul... 249 e-105
dbj|AB025796.1| Populus alba POPCEL2 mRNA for endo-1,4-beta... 191 e-100
dbj|D32166.1|POPCEL Populus alba mRNA for cellulase (endo-1... 177 2e-097
gb|AY660968.1| Populus tremula x Populus tremuloides Cel9B ... 199 1e-082
gb|DN501932.1|DN501932 V038E02.5pR Populus male catkins cDN... 149 7e-082
gb|CK114145.1|CK114145 V038E02 Populus male catkins cDNA li... 149 5e-078
dbj|AB049199.1| Populus alba PopCel1 gene for endo-1,4-beta... 181 5e-076
gb|DT515727.1|DT515727 WS02429.B21.1_F19 PTxD-ICC-N-A-14 Po... 192 7e-075
dbj|AB049200.1| Populus alba PopCel2 gene for endo-1,4-beta... 180 1e-074
gb|DT519386.1|DT519386 WS02441.B21_F23 PTxD-ICC-N-A-14 Popu... 156 2e-073
gb|CV253984.1|CV253984 WS0223.B21_K09 PTxD-ICC-A-12 Populus... 151 1e-072
gb|CX658587.1|CX658587 PO01036G06 Poplar SC cDNA library Po... 191 2e-070
gb|CA930454.1|CA930454 MTU4CA.P22.G09 Aspen apex cDNA Libra... 210 3e-067
gb|CV267046.1|CV267046 WS02030.B21_K22 PTxN-IB-N-A-11 Popul... 192 2e-066
gb|DT520699.1|DT520699 WS02448.B21_E15 PTxD-ICC-N-A-14 Popu... 198 1e-064
gb|CV272757.1|CV272757 WS0158.B21_J18 PTxN-IB-A-6 Populus t... 197 6e-064
gb|BU877721.1|BU877721 V038bE02 Populus flower cDNA library... 149 3e-063
gb|CX659368.1|CX659368 PO01029H05 Poplar SC cDNA library Po... 195 6e-063
gb|CV270742.1|CV270742 WS0152.B21_M22 PTxN-IB-A-6 Populus t... 135 1e-062
gb|CX654603.1|CX654603 PO02018B07 Poplar SC cDNA library Po... 113 1e-062
gb|CA925970.1|CA925970 MTU7TL.P8.D02 Aspen leaf cDNA Librar... 175 5e-061
gb|DT470365.1|DT470365 WS01920.C21_K15 PT-DX-N-A-10 Populus... 166 3e-057
gb|CV256402.1|CV256402 WS0243.B21_L24 PTxD-ICC-N-A-14 Popul... 160 1e-055
gb|CX657081.1|CX657081 PO02059C06 Poplar SC cDNA library Po... 166 9e-055
gb|CX653604.1|CX653604 PO02004D08 Poplar SC cDNA library Po... 187 1e-053
gb|DT514735.1|DT514735 WS02425.B21_K05 PTxD-ICC-N-A-14 Popu... 199 2e-053
gb|CX654407.1|CX654407 PO02004C07 Poplar SC cDNA library Po... 174 2e-053
gb|BI129171.1|BI129171 G086P82Y Populus cambium cDNA librar... 154 5e-051
gb|CX657483.1|CX657483 PO02048A07 Poplar SC cDNA library Po... 192 3e-050
gb|CX657360.1|CX657360 PO02043C07 Poplar SC cDNA library Po... 97 6e-050
gb|CX655130.1|CX655130 PO02030C08 Poplar SC cDNA library Po... 130 1e-049
gb|DN499693.1|DN499693 T078C12.5pR Populus shoot meristem c... 160 1e-049
gb|CA932223.1|CA932223 MTU5CS.P10.B12 Aspen stem cDNA Libra... 160 1e-049
gb|CX660404.1|CX660404 PO01032G03 Poplar SC cDNA library Po... 122 2e-049
gb|CA932541.1|CA932541 MTU5CS.P14.D02 Aspen stem cDNA Libra... 158 5e-049
gb|CK087641.1|CK087641 A016P51.3pR Hybrid aspen plasmid lib... 195 5e-049
gb|CX655743.1|CX655743 PO02039D08 Poplar SC cDNA library Po... 170 1e-048
gb|CX657584.1|CX657584 PO02055D09 Poplar SC cDNA library Po... 89 1e-048
gb|CX654638.1|CX654638 PO02057C11 Poplar SC cDNA library Po... 86 3e-048
gb|CX655795.1|CX655795 PO02040B08 Poplar SC cDNA library Po... 182 2e-047
gb|DT508178.1|DT508178 WS02420.BR_E10 PTxD-ICC-N-A-14 Popul... 188 9e-047
gb|DT512795.1|DT512795 WS02420.B21_E10 PTxD-ICC-N-A-14 Popu... 188 9e-047
gb|CN523596.1|CN523596 GQ015M07.T3_C08 GQ015 Populus tricho... 127 1e-045
gb|DV466210.1|DV466210 MTUNUL1.P48.G03 NUL Populus fremonti... 132 5e-045
gb|BU837593.1|BU837593 T103E10 Populus apical shoot cDNA li... 120 1e-044
gb|CX655043.1|CX655043 PO01004B06 Poplar SC cDNA library Po... 80 2e-044
gb|CN518303.1|CN518303 GQ0091.B3_F12 GQ009 Populus trichoca... 178 7e-044
gb|CV227953.1|CV227953 WS0168.B21_K23 PT-DX-A-7 Populus tri... 178 7e-044
gb|DV464578.1|DV464578 MTUNUL1.P29.C07 NUL Populus fremonti... 176 2e-043
gb|CV252315.1|CV252315 PX0011.B21_E13 PT-X-FL-A-1 Populus t... 114 7e-042
gb|CX657138.1|CX657138 PO02030F03 Poplar SC cDNA library Po... 168 7e-041
gb|CX656645.1|CX656645 PO02021B01 Poplar SC cDNA library Po... 80 5e-040
gb|DN491846.1|DN491846 V031G10.3pR Populus male catkins cDN... 100 2e-039
gb|CX657589.1|CX657589 PO02055H12 Poplar SC cDNA library Po... 143 2e-039
gb|DN491984.1|DN491984 V038E02.3pR Populus male catkins cDN... 105 3e-039
gb|DV466663.1|DV466663 MTUNUL1.P8.F03 NUL Populus fremontii... 99 1e-037
gb|CF119223.1|CF119223 MTU10CS.P15.B01 Aspen stem cDNA Libr... 141 1e-037
gb|CF119547.1|CF119547 MTU10CS.P3.C05 Aspen stem cDNA Libra... 141 1e-037
gb|CF119849.1|CF119849 MTU10CS.P7.B01 Aspen stem cDNA Libra... 141 1e-037
gb|CX657123.1|CX657123 PO01003H05 Poplar SC cDNA library Po... 99 2e-037
gb|CX657515.1|CX657515 PO02049C02 Poplar SC cDNA library Po... 133 2e-036
gb|CX653824.1|CX653824 PO02007G04 Poplar SC cDNA library Po... 108 4e-036
gb|DT514739.1|DT514739 WS02425.B21_K09 PTxD-ICC-N-A-14 Popu... 140 5e-036
gb|CA934229.1|CA934229 MTU3TS.P4.H01 Aspen stem cDNA Librar... 89 5e-036
gb|CV270811.1|CV270811 WS0153.B21_A01 PTxN-IB-A-6 Populus t... 151 9e-036
gb|DT510114.1|DT510114 WS02425.BR_K05 PTxD-ICC-N-A-14 Popul... 80 2e-035
gb|DT475971.1|DT475971 WS0128.BR_N04 PT-GT-FL-A-3 Populus t... 149 5e-035
gb|CX173133.1|CX173133 G02_69-103_14.ab1 leaf inoculated wi... 99 2e-034
gb|BI129393.1|BI129393 G090P13Y Populus cambium cDNA librar... 145 4e-034
gb|BI131218.1|BI131218 G117P20Y Populus cambium cDNA librar... 70 8e-034
gb|BI127282.1|BI127282 G058P15Y Populus cambium cDNA librar... 80 1e-033
gb|CX655933.1|CX655933 PO02043B11 Poplar SC cDNA library Po... 81 2e-032
gb|CX656938.1|CX656938 PO02028G06 Poplar SC cDNA library Po... 90 3e-032
gb|CX655021.1|CX655021 PO01003H07 Poplar SC cDNA library Po... 138 7e-032
gb|DT509035.1|DT509035 WS02422.BR_K01 PTxD-ICC-N-A-14 Popul... 100 2e-031
gb|BU825887.1|BU825887 UK114TC05 Populus apical shoot cDNA ... 98 6e-031
gb|CV236723.1|CV236723 WS01225.B21.1_C20 PT-GT-FL-A-3 Popul... 89 5e-030
gb|CK107834.1|CK107834 G058P15 Populus tension wood cDNA li... 80 6e-030
gb|CA933096.1|CA933096 MTU5CS.P3.D12 Aspen stem cDNA Librar... 80 1e-028
gb|CA932514.1|CA932514 MTU5CS.P14.A01 Aspen stem cDNA Libra... 80 1e-028
gb|CV270845.1|CV270845 WS0153.B21_B14 PTxN-IB-A-6 Populus t... 127 1e-028
gb|CA932768.1|CA932768 MTU5CS.P17.B11 Aspen stem cDNA Libra... 80 2e-028
gb|CA933421.1|CA933421 MTU5CS.P7.G11 Aspen stem cDNA Librar... 91 4e-028
gb|DT510953.1|DT510953 WS02429.BR_C15 PTxD-ICC-N-A-14 Popul... 80 5e-028
gb|CA934502.1|CA934502 MTU3TS.P8.E12 Aspen stem cDNA Librar... 78 6e-028
gb|CA933773.1|CA933773 MTU3TS.P12.D04 Aspen stem cDNA Libra... 80 8e-028
gb|CX653479.1|CX653479 PO02002E08 Poplar SC cDNA library Po... 76 8e-028
gb|CX657553.1|CX657553 PO02053F03 Poplar SC cDNA library Po... 65 9e-028
gb|DN489777.1|DN489777 T078C12.3pR Populus shoot meristem c... 79 2e-025
gb|DT515655.1|DT515655 WS02429.B21.1_C15 PTxD-ICC-N-A-14 Po... 80 8e-025
gb|CV245494.1|CV245494 WS0257.B21_J05 PT-MB-N-A-15 Populus ... 79 2e-023
gb|BI132315.1|BI132315 G134P80Y Populus cambium cDNA librar... 95 2e-023
gb|DV465018.1|DV465018 MTUNUL1.P33.H06 NUL Populus fremonti... 99 3e-023
gb|DV465380.1|DV465380 MTUNUL1.P38.H01 NUL Populus fremonti... 99 3e-023
gb|DT511027.1|DT511027 WS02429.BR_F19 PTxD-ICC-N-A-14 Popul... 99 3e-023
gb|CV228635.1|CV228635 WS01910.B21_M09 PT-DX-N-A-10 Populus... 105 6e-022
gb|CV264808.1|CV264808 WS02025.B21_I19 PTxN-IB-N-A-11 Popul... 103 3e-021
>gb|DT513650.1|DT513650 WS02422.B21_K01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_K01 3', mRNA sequence
Length = 888
Score = 249 bits (539), Expect(3) = e-122
Identities = 100/134 (74%), Positives = 113/134 (84%)
Frame = -1 / -1
Query: 811 NHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRV 632
+HPQ+QYSPGGL+FK G SNMQHVT LSFLLLAYS+YLSHA V CG ++ASP L+++
Sbjct: 657 SHPQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSSYLSHANKVVPCGETTASPALLKQL 478
Query: 631 AKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPA 452
AKRQVDYILGDNPL MSYMVGYG R+P RIHHR SSLPSV AHPARI CK G+ Y+ SP
Sbjct: 477 AKRQVDYILGDNPLGMSYMVGYGPRYPLRIHHRGSSLPSVQAHPARIRCKEGSRYFLSPN 298
Query: 451 PNPNLLVGAVVGGP 410
PNPN+ VGAVVGGP
Sbjct: 297 PNPNVHVGAVVGGP 256
Score = 151 bits (325), Expect(3) = e-122
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1 / -1
Query: 1036 WLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFR 857
WLHKA+RRR YREY+ +NEV+L A D INEFGWDNKHAGINVLISKEVLMG+ EYF+SF+
Sbjct: 879 WLHKASRRRRYREYVVKNEVILHAGDTINEFGWDNKHAGINVLISKEVLMGRAEYFESFK 700
Query: 856 VNADNFMCTLLPGISN 809
NAD+F+C++LPGIS+
Sbjct: 699 QNADDFICSILPGISH 652
Score = 150 bits (322), Expect(4) = 6e-070
Identities = 68/101 (67%), Positives = 70/101 (69%)
Frame = +3 / +2
Query: 492 IRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEP 671
+RAGCA TDGSEL WWI G R PYPTMYDI SGLSP M*ST RLA G+A P
Sbjct: 338 MRAGCACTDGSELPLWWILSG*RGPYPTMYDIPSGLSPRM*ST*RLANCLRRAGEAVVSP 517
Query: 672 HETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
H T AWLR*LE*A R D VTCCMLL P LN SPPGEY
Sbjct: 518 HGTTLLAWLR*LE*AKSRKDKDVTCCMLLPPALNISPPGEY 640
Score = 105 bits (223), Expect(4) = 6e-070
Identities = 47/75 (62%), Positives = 52/75 (69%)
Frame = +3 / +2
Query: 813 EMPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLL 992
E+PG +K SA KD KYS+ PI TS EMRTLMPACLLS PNSLM S A + TSF
Sbjct: 656 EIPGNIEQIKSSAFCLKDSKYSALPINTSLEMRTLMPACLLSHPNSLMVSPACNITSFFT 835
Query: 993 MYSRYSRRRVALCSH 1037
YS Y RRR ALC+H
Sbjct: 836 TYSLYLRRREALCNH 880
Score = 77.1 bits (162), Expect(3) = e-122
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1 / -1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHP 296
V G + +DAFPD+R FQ+SEPTTYINAPL+GLLAYFSAHP
Sbjct: 270 VVGGPNITDAFPDSRPFFQESEPTTYINAPLVGLLAYFSAHP 145
Score = 42.8 bits (87), Expect(4) = 6e-070
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +3 / +2
Query: 276 PPDSAGLGCAEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
P S G AEK A RP GALM VVGSD SGKAS P T
Sbjct: 125 PFHSGNQGWAEKYASRPTKGALM*VVGSDS*KNGLESGKASVMLGPPTT 271
Score = 24.4 bits (47), Expect(4) = 6e-070
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 408 VGPPTTAPT 434
+GPPTTAPT
Sbjct: 254 LGPPTTAPT 280
>gb|DT525548.1|DT525548 WS02045.C21_K07 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02045_K07 3', mRNA sequence
Length = 897
Score = 249 bits (539), Expect(3) = e-105
Identities = 100/134 (74%), Positives = 113/134 (84%)
Frame = -1 / -3
Query: 811 NHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRV 632
+HPQ+QYSPGGL+FK G SNMQHVT LSFLLLAYS+YLSHA V CG ++ASP L+++
Sbjct: 763 SHPQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSSYLSHANKVVPCGETTASPALLKQL 584
Query: 631 AKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPA 452
AKRQVDYILGDNPL MSYMVGYG R+P RIHHR SSLPSV AHPARI CK G+ Y+ SP
Sbjct: 583 AKRQVDYILGDNPLGMSYMVGYGPRYPLRIHHRGSSLPSVQAHPARIRCKEGSRYFLSPN 404
Query: 451 PNPNLLVGAVVGGP 410
PNPN+ VGAVVGGP
Sbjct: 403 PNPNVHVGAVVGGP 362
Score = 150 bits (322), Expect(4) = 6e-059
Identities = 68/101 (67%), Positives = 70/101 (69%)
Frame = +3 / +3
Query: 492 IRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEP 671
+RAGCA TDGSEL WWI G R PYPTMYDI SGLSP M*ST RLA G+A P
Sbjct: 444 MRAGCACTDGSELPLWWILSG*RGPYPTMYDIPSGLSPRM*ST*RLANCLRRAGEAVVSP 623
Query: 672 HETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
H T AWLR*LE*A R D VTCCMLL P LN SPPGEY
Sbjct: 624 HGTTLLAWLR*LE*AKSRKDKDVTCCMLLPPALNISPPGEY 746
Score = 96.8 bits (205), Expect(3) = e-105
Identities = 36/46 (78%), Positives = 44/46 (95%)
Frame = -1 / -3
Query: 946 FGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLPGISN 809
FGWDNKHAGINVLISKEVLMG+ EYF+SF+ NAD+F+C++LPGIS+
Sbjct: 895 FGWDNKHAGINVLISKEVLMGRAEYFESFKQNADDFICSILPGISH 758
Score = 77.1 bits (162), Expect(3) = e-105
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1 / -3
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHP 296
V G + +DAFPD+R FQ+SEPTTYINAPL+GLLAYFSAHP
Sbjct: 376 VVGGPNITDAFPDSRPFFQESEPTTYINAPLVGLLAYFSAHP 251
Score = 68.0 bits (142), Expect(4) = 6e-059
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3 / +3
Query: 813 EMPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPN 947
E+PG +K SA KD KYS+ PI TS EMRTLMPACLLS PN
Sbjct: 762 EIPGNIEQIKSSAFCLKDSKYSALPINTSLEMRTLMPACLLSHPN 896
Score = 42.8 bits (87), Expect(4) = 6e-059
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +3 / +3
Query: 276 PPDSAGLGCAEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
P S G AEK A RP GALM VVGSD SGKAS P T
Sbjct: 231 PFHSGNQGWAEKYASRPTKGALM*VVGSDS*KNGLESGKASVMLGPPTT 377
Score = 24.4 bits (47), Expect(4) = 6e-059
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 408 VGPPTTAPT 434
+GPPTTAPT
Sbjct: 360 LGPPTTAPT 386
>dbj|AB025796.1| Populus alba POPCEL2 mRNA for endo-1,4-beta glucanase, complete cds
Length = 1616
Score = 191 bits (411), Expect(4) = e-100
Identities = 74/131 (56%), Positives = 94/131 (71%)
Frame = -1 / +2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGL +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+
Sbjct: 1001 QAQYTPGGLFYKATESNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKK 1180
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNP +MSYMVG+G ++P+ +HHR SS+PS+ AHP RI C G Y S +PNP
Sbjct: 1181 QVDYILGDNPAKMSYMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNP 1360
Query: 442 NLLVGAVVGGP 410
N+LVGA+VGGP
Sbjct: 1361 NVLVGAIVGGP 1393
Score = 95.9 bits (203), Expect(4) = e-100
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = -2 / +2
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
SIVF+++DP+YS LL A VF+FAD++RG YS SL +AVCP YC YSGYQDELL
Sbjct: 590 SIVFKESDPSYSTELLHAATKVFDFADRHRGSYSDSLSSAVCPFYCSYSGYQDELL 757
Score = 80.8 bits (170), Expect(4) = e-100
Identities = 31/77 (40%), Positives = 48/77 (62%)
Frame = -1 / +2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
+WLHKA+ Y YI+ N +G+ D F WD+K G +L+SKE L E FQ +
Sbjct: 767 SWLHKASLNGTYLAYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKEFLDKTTEEFQIY 946
Query: 859 RVNADNFMCTLLPGISN 809
+ ++DN++C+L+PG S+
Sbjct: 947 KSHSDNYICSLMPGSSS 997
Score = 70.3 bits (147), Expect(5) = 3e-024
Identities = 38/84 (45%), Positives = 42/84 (50%)
Frame = +3 / -3
Query: 552 GNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRND 731
G P PTM DI +GLSP +*STC A S + + PH PP R L RR
Sbjct: 1251 GYLLPNPTM*DIFAGLSPKI*STCFFA*AMSDSAVTVEPPHLATPPFEPRYLAYVKRRKV 1072
Query: 732 SCVTCCMLLLPTLNSSPPGEYWIW 803
VT C LL L SPPG YW W
Sbjct: 1071 VEVTYCKLLSVAL*KSPPGVYWAW 1000
Score = 55.6 bits (115), Expect(4) = e-100
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -1 / +2
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
G D+ D F D R +QQSEP TYINAP +G LA+FSA
Sbjct: 1385 GGPDNRDHFADDRNNYQQSEPATYINAPFVGALAFFSA 1498
Score = 46.0 bits (94), Expect(5) = 3e-024
Identities = 26/52 (50%), Positives = 28/52 (53%)
Frame = +2 / -3
Query: 1064 WYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
WYPE Q* G TA R L* P LSA S T A +E* GS S T+E
Sbjct: 744 WYPEYEQ*NGQTAELRESL*DPLCLSAKSKTFVAA*SNSVE*EGSDSLNTIE 589
Score = 32.7 bits (65), Expect(5) = 3e-024
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / -3
Query: 303 AEK*ARRPMSGALMYVVGSDC 365
AEK AR P +GAL+ V GSDC
Sbjct: 1497 AEKKARAPTNGALI*VAGSDC 1435
Score = 23.1 bits (44), Expect(5) = 3e-024
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3 / -3
Query: 486 QPIRAGCAATDGSE 527
Q +R GCA DG+E
Sbjct: 1317 QEMRFGCACIDGTE 1276
Score = 23.1 bits (44), Expect(5) = 3e-024
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / -3
Query: 411 GPPTTAPTSRF 443
GPPT APT F
Sbjct: 1392 GPPTMAPTRTF 1360
>dbj|D32166.1|POPCEL Populus alba mRNA for cellulase (endo-1,4-beta-glucanase), complete
cds
Length = 1580
Score = 177 bits (382), Expect(4) = 2e-097
Identities = 70/131 (53%), Positives = 90/131 (68%)
Frame = -1 / +3
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGL +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+
Sbjct: 993 QAQYTPGGLFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGSTVTAESLIAQAKK 1172
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNP RMSYMVG+G R+P+ +HHR SS+PS+ I C G + S +PNP
Sbjct: 1173 QVDYILGDNPARMSYMVGFGNRYPQHVHHRGSSVPSIHDTRIGISCNDGFQFLYSSSPNP 1352
Query: 442 NLLVGAVVGGP 410
N+LVGA++GGP
Sbjct: 1353 NVLVGAIIGGP 1385
Score = 99.1 bits (210), Expect(4) = 2e-097
Identities = 37/56 (66%), Positives = 48/56 (85%)
Frame = -2 / +3
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
SIVF+++DP+YS +LL A+ VF+FAD+YRG YS+SL++ VCP YC YSGYQDELL
Sbjct: 582 SIVFKESDPSYSTKLLHTAMKVFDFADRYRGSYSNSLNSVVCPFYCSYSGYQDELL 749
Score = 81.3 bits (171), Expect(4) = 2e-097
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = -1 / +3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
+W+H+A++ Y YI+ N +G+ D F WD+K G +L+SKE L E FQ +
Sbjct: 759 SWIHRASQNGSYLTYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKEFLEKTTEEFQLY 938
Query: 859 RVNADNFMCTLLPGISN 809
+ ++DN++C+L+PG S+
Sbjct: 939 KSHSDNYICSLIPGTSS 989
Score = 72.1 bits (151), Expect(3) = 3e-027
Identities = 38/84 (45%), Positives = 43/84 (51%)
Frame = +3 / -2
Query: 552 GNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRND 731
G P PTM DI +GLSP +*STC A S + + PH PP R L +RR
Sbjct: 1243 GYLLPNPTM*DILAGLSPKI*STCFFACAMSDSAVTVEPPHLATPPFEPRYLAYVNRRKV 1064
Query: 732 SCVTCCMLLLPTLNSSPPGEYWIW 803
VT C LL L SPPG YW W
Sbjct: 1063 VEVTYCKLLSLAL*KSPPGVYWAW 992
Score = 57.0 bits (118), Expect(4) = 2e-097
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -1 / +3
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
G D+ D F D+R +QQSEP TYINAP +G LA+FSA
Sbjct: 1377 GGPDNRDNFADSRNNYQQSEPATYINAPFVGALAFFSA 1490
Score = 55.6 bits (115), Expect(3) = 3e-027
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +2 / -2
Query: 1064 WYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
WYPE* Q* G T R LL* P YLSA SNT A +E* GS S KT+E
Sbjct: 736 WYPE*EQ*NGQTTELRELL*EPLYLSAKSNTFIAV*SSLVE*EGSDSLKTIE 581
Score = 40.0 bits (81), Expect(3) = 3e-027
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = +3 / -2
Query: 303 AEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGP 416
AEK AR P GAL+YV GSDC R S K S S P
Sbjct: 1489 AEKKARAPTKGALIYVAGSDC**LFRLSAKLSLLSGPP 1376
>gb|AY660968.1| Populus tremula x Populus tremuloides Cel9B mRNA, complete cds
Length = 1461
Score = 199 bits (429), Expect(3) = 1e-082
Identities = 82/174 (47%), Positives = 115/174 (66%)
Frame = -1 / +1
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ SN+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 937 SPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLY 1116
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSP 455
VAKRQVDYILG+NP+RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G +
Sbjct: 1117 VAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHS 1296
Query: 454 APNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPN 293
A ++ + G + +D +PD R+ + SEP TYINA ++G LAYF+A N
Sbjct: 1297 ANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFAATLN 1458
Score = 79.9 bits (168), Expect(3) = 1e-082
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -2 / +1
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR D YS LL A VF+FA +Y+G YS SL +AVCP YC YSGY+DELL
Sbjct: 550 SMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYSDSLGSAVCPFYCSYSGYKDELL 717
Score = 67.5 bits (141), Expect(3) = 1e-082
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +1
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
LGA D + F WDNK+AG++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 781 LGADDQPDLFSWDNKYAGVHVLLSRRALLNNDKNFEQFEGEAESFMCRILP 933
>gb|DN501932.1|DN501932 V038E02.5pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V038E02 5', mRNA sequence
Length = 757
Score = 149 bits (321), Expect(3) = 7e-082
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -1 / +1
Query: 1036 WLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFR 857
WLHKA+RRR YREY+ +NEV+L A D INEFGWDNKHAGINVLISKEVLMG+ EYF SF+
Sbjct: 355 WLHKASRRRRYREYVVKNEVILHAGDTINEFGWDNKHAGINVLISKEVLMGRAEYFGSFK 534
Query: 856 VNADNFMCTLLPGISN 809
NAD+F+C++LPGIS+
Sbjct: 535 QNADDFICSILPGISH 582
Score = 104 bits (222), Expect(3) = 1e-048
Identities = 47/75 (62%), Positives = 52/75 (69%)
Frame = +3 / -3
Query: 813 EMPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLL 992
E+PG +K SA KD KYS+ PI TS EMRTLMPACLLS PNSLM S A + TSF
Sbjct: 578 EIPGNIEQIKSSAFCLKDPKYSALPINTSLEMRTLMPACLLSHPNSLMVSPACNITSFFT 399
Query: 993 MYSRYSRRRVALCSH 1037
YS Y RRR ALC+H
Sbjct: 398 TYSLYLRRREALCNH 354
Score = 97.7 bits (207), Expect(3) = 7e-082
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = -1 / +1
Query: 811 NHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRV 632
+HPQ+QYSPGGL+F G SNM HVT LSFLLLAYS YLSHA + CG ++ASP ++++
Sbjct: 577 SHPQVQYSPGGLIFNAGRSNMHHVTSLSFLLLAYSTYLSHANKVLPCGETTASPALIKQL 756
Score = 96.8 bits (205), Expect(3) = 7e-082
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = -2 / +1
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
SIVFR DPAYS+ LL+RAV VF+FAD++RG YS SL +AVCP YCD +G QDELL
Sbjct: 175 SIVFRSRDPAYSRLLLNRAVRVFDFADRHRGAYSGSLRSAVCPFYCDVNGCQDELL 342
Score = 66.1 bits (138), Expect(3) = 1e-048
Identities = 30/48 (62%), Positives = 32/48 (66%)
Frame = +3 / -3
Query: 651 GDADDEPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
G+A PH AWLR*+E*A R D VT CMLLLP LN SPPGEY
Sbjct: 737 GEAVVSPHGRTLLAWLR*VE*AKSRKDKDVTWCMLLLPALNISPPGEY 594
Score = 62.0 bits (129), Expect(3) = 1e-048
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = +2 / -3
Query: 1064 WYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
W P SQ*+GHTA +L L PR LSA S T TAR R LE*AGS R TM+
Sbjct: 329 WQPFTSQ*KGHTAERKLPLYAPRCLSAKSKTLTARLRSNLE*AGSRERNTMD 174
>gb|CK114145.1|CK114145 V038E02 Populus male catkins cDNA library Populus trichocarpa cDNA
clone V038E02 5', mRNA sequence
Length = 784
Score = 149 bits (321), Expect(4) = 5e-078
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -1 / +1
Query: 1036 WLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFR 857
WLHKA+RRR YREY+ +NEV+L A D INEFGWDNKHAGINVLISKEVLMG+ EYF SF+
Sbjct: 355 WLHKASRRRRYREYVVKNEVILHAGDTINEFGWDNKHAGINVLISKEVLMGRAEYFGSFK 534
Query: 856 VNADNFMCTLLPGISN 809
NAD+F+C++LPGIS+
Sbjct: 535 QNADDFICSILPGISH 582
Score = 104 bits (222), Expect(4) = 3e-045
Identities = 47/75 (62%), Positives = 52/75 (69%)
Frame = +3 / -3
Query: 813 EMPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLL 992
E+PG +K SA KD KYS+ PI TS EMRTLMPACLLS PNSLM S A + TSF
Sbjct: 578 EIPGNIEQIKSSAFCLKDPKYSALPINTSLEMRTLMPACLLSHPNSLMVSPACNITSFFT 399
Query: 993 MYSRYSRRRVALCSH 1037
YS Y RRR ALC+H
Sbjct: 398 TYSLYLRRREALCNH 354
Score = 96.8 bits (205), Expect(4) = 5e-078
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = -2 / +1
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
SIVFR DPAYS+ LL+RAV VF+FAD++RG YS SL +AVCP YCD +G QDELL
Sbjct: 175 SIVFRSRDPAYSRLLLNRAVRVFDFADRHRGAYSGSLRSAVCPFYCDVNGCQDELL 342
Score = 67.5 bits (141), Expect(4) = 5e-078
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = -1 / +1
Query: 811 NHPQIQYSPGGLLFKVGSSNMQHVTQLSFLL 719
+HPQ+QYSPGGL+FK G SNMQHVT LSFLL
Sbjct: 577 SHPQVQYSPGGLIFKAGGSNMQHVTSLSFLL 669
Score = 62.0 bits (129), Expect(4) = 3e-045
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = +2 / -3
Query: 1064 WYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
W P SQ*+GHTA +L L PR LSA S T TAR R LE*AGS R TM+
Sbjct: 329 WQPFTSQ*KGHTAERKLPLYAPRCLSAKSKTLTARLRSNLE*AGSRERNTMD 174
Score = 46.9 bits (96), Expect(4) = 3e-045
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +3 / -3
Query: 723 RNDSCVTCCMLLLPTLNSSPPGEY 794
R D VTCCMLL P LN SPPGEY
Sbjct: 665 RKDKDVTCCMLLPPALNISPPGEY 594
Score = 35.9 bits (72), Expect(4) = 5e-078
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -1 / +3
Query: 727 FLLLAYSNYLSHAGGRVSCGSSSAS 653
F LAYS+YLSHA V CG ++AS
Sbjct: 660 FPALAYSSYLSHANKVVPCGETTAS 734
Score = 25.8 bits (50), Expect(4) = 3e-045
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / -1
Query: 669 PHETRPPAWLR*LE*A 716
PH T AWLR*LE*A
Sbjct: 718 PHGTTLLAWLR*LE*A 671
>dbj|AB049199.1| Populus alba PopCel1 gene for endo-1,4-beta glucanase, complete cds
Length = 4247
Score = 181 bits (390), Expect(5) = 5e-076
Identities = 73/145 (50%), Positives = 94/145 (64%)
Frame = -1 / +1
Query: 784 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYIL 605
GGL +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+QVDYIL
Sbjct: 3685 GGLFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGSTVTTESLIAQAKKQVDYIL 3864
Query: 604 GDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGA 425
GDNP RMSYMVG+G R+P+ +HHR SS+PS+ AHP RI C G + S +PNPN+LVGA
Sbjct: 3865 GDNPARMSYMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNPNVLVGA 4044
Query: 424 VVGGPTDDSDAFPDARAVFQQSEPT 350
++GGP + + D Q T
Sbjct: 4045 IIGGPDNRDNFADDRNNYQQSEPAT 4119
Score = 63.4 bits (132), Expect(5) = 5e-076
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = -2 / +3
Query: 1155 VFEFADKYRGPYSSSLHAAVCPCYCDYSGYQ 1063
VF+FAD+YRG YS+SL++ VCP YC YSGYQ
Sbjct: 3081 VFDFADRYRGSYSNSLNSVVCPFYCSYSGYQ 3173
Score = 50.1 bits (103), Expect(5) = 5e-076
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -1 / +1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISK 899
+W+H+A++ Y YI+ N +G+ D F WD+K G +L+SK
Sbjct: 3265 SWIHRASQNGSYLTYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSK 3405
Score = 34.5 bits (69), Expect(5) = 5e-076
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -1 / +3
Query: 901 KEVLMGKDEYFQSFRVNADNFMCTLLPGISN 809
+E L E FQ ++ ++DN++C+L+PG S+
Sbjct: 3486 QEFLEKTTEEFQLYKSHSDNYICSLIPGTSS 3578
Score = 31.8 bits (63), Expect(5) = 5e-076
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -2 / +2
Query: 1218 SIVFRDADPAYSKRLLDRAVAV 1153
SIVF+++DP+YS +LL A+ V
Sbjct: 2927 SIVFKESDPSYSTKLLHTAMKV 2992
>gb|DT515727.1|DT515727 WS02429.B21.1_F19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_F19 3', mRNA sequence
Length = 944
Score = 192 bits (414), Expect(3) = 7e-075
Identities = 77/151 (50%), Positives = 99/151 (65%)
Frame = -1 / -2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGL +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+
Sbjct: 631 QAQYTPGGLFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGSTVTAESLIAQAKK 452
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNP RMSYMVG+G R+P+ +HHR SS+PS+ AHP RI C G + S +PNP
Sbjct: 451 QVDYILGDNPARMSYMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNP 272
Query: 442 NLLVGAVVGGPTDDSDAFPDARAVFQQSEPT 350
N+LVGA++GGP + + D Q T
Sbjct: 271 NVLVGAIIGGPDNRDNFADDRNNYQQSEPAT 179
Score = 81.3 bits (171), Expect(3) = 7e-075
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = -1 / -2
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
+W+H+A++ Y YI+ N +G+ D F WD+K G +L+SKE L E FQ +
Sbjct: 865 SWIHRASQNGSYLTYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKEFLEKTTEEFQLY 686
Query: 859 RVNADNFMCTLLPGISN 809
+ ++DN++C+L+PG S+
Sbjct: 685 KSHSDNYICSLIPGTSS 635
Score = 72.1 bits (151), Expect(4) = 2e-021
Identities = 38/84 (45%), Positives = 43/84 (51%)
Frame = +3 / +3
Query: 552 GNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRND 731
G P PTM DI +GLSP +*STC A S + + PH PP R L +RR
Sbjct: 381 GYLLPNPTM*DILAGLSPKI*STCFFACAMSDSAVTVEPPHLATPPFEPRYLAYVNRRKV 560
Query: 732 SCVTCCMLLLPTLNSSPPGEYWIW 803
VT C LL L SPPG YW W
Sbjct: 561 VEVTYCKLLSLAL*KSPPGVYWAW 632
Score = 47.3 bits (97), Expect(3) = 7e-075
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -2 / -2
Query: 1119 SSSLHAAVCPCYCDYSGYQDELL 1051
S+SL++ VCP YC YSGYQDELL
Sbjct: 943 SNSLNSVVCPFYCSYSGYQDELL 875
Score = 41.4 bits (84), Expect(4) = 2e-021
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 303 AEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGP 416
AEK AR P +GAL+YV GSDC R+S K S S P
Sbjct: 135 AEKKARAPTNGALIYVAGSDC**LFRSSAKLSLLSGPP 248
Score = 28.1 bits (55), Expect(4) = 2e-021
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2 / +3
Query: 1064 WYPE*SQ*QGHTAAWRLLL 1120
WYPE* Q* G T R LL
Sbjct: 888 WYPE*EQ*NGQTTELRELL 944
Score = 23.1 bits (44), Expect(4) = 2e-021
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 486 QPIRAGCAATDGSE 527
Q +R GCA DG+E
Sbjct: 315 QEMRFGCACIDGTE 356
>dbj|AB049200.1| Populus alba PopCel2 gene for endo-1,4-beta-glucanase, complete cds
Length = 4603
Score = 180 bits (387), Expect(4) = 1e-074
Identities = 70/125 (56%), Positives = 89/125 (71%)
Frame = -1 / +3
Query: 784 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYIL 605
GGL +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+QVDYIL
Sbjct: 3927 GGLFYKATESNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYIL 4106
Query: 604 GDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGA 425
GDNP +MSYMVG+G ++P+ +HHR SS+PS+ AHP RI C G Y S +PNPN+LVGA
Sbjct: 4107 GDNPAKMSYMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNPNVLVGA 4286
Query: 424 VVGGP 410
+VGGP
Sbjct: 4287 IVGGP 4301
Score = 64.8 bits (135), Expect(4) = 1e-074
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = -2 / +3
Query: 1182 KRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDEL 1054
K+ L V VF+FAD++RG YS SL +AVCP YC YSGYQ L
Sbjct: 3300 KKYLIVIVQVFDFADRHRGSYSDSLSSAVCPFYCSYSGYQVRL 3428
Score = 55.6 bits (115), Expect(4) = 1e-074
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -1 / +3
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
G D+ D F D R +QQSEP TYINAP +G LA+FSA
Sbjct: 4293 GGPDNRDHFADDRNNYQQSEPATYINAPFVGALAFFSA 4406
Score = 51.9 bits (107), Expect(4) = 1e-074
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -1 / +3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVL 890
+WLHKA+ Y YI+ N +G+ D F WD+K G +L+SK +L
Sbjct: 3510 SWLHKASLNGTYLAYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKVLL 3659
>gb|DT519386.1|DT519386 WS02441.B21_F23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02441_F23 3', mRNA sequence
Length = 830
Score = 156 bits (336), Expect(4) = 2e-073
Identities = 61/113 (53%), Positives = 82/113 (72%)
Frame = -1 / +3
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ SN+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 429 SPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLY 608
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
VAKRQVDYILG+NP+RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G
Sbjct: 609 VAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSG 767
Score = 79.9 bits (168), Expect(4) = 2e-073
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -2 / +3
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR D YS LL A VF+FA +Y+G YS SL +AVCP YC YSGY+DELL
Sbjct: 42 SMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYSDSLGSAVCPFYCSYSGYKDELL 209
Score = 67.5 bits (141), Expect(4) = 2e-073
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
LGA D + F WDNK+AG++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 273 LGADDQPDLFSWDNKYAGVHVLLSRRALLNNDKNFEQFEGEAESFMCRILP 425
Score = 30.4 bits (60), Expect(4) = 2e-073
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1 / +3
Query: 469 YYTSPAPNPNLLVGAVVG 416
++ S PNPN+L GA+VG
Sbjct: 777 FFHSANPNPNILTGAIVG 830
>gb|CV253984.1|CV253984 WS0223.B21_K09 PTxD-ICC-A-12 Populus trichocarpa x Populus deltoides
cDNA clone WS0223_K09 3', mRNA sequence
Length = 758
Score = 151 bits (325), Expect(2) = 1e-072
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1 / -2
Query: 1036 WLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFR 857
WLHKA+RRR YREY+ +NEV+L A D INEFGWDNKHAGINVLISKEVLMG+ EYF+SF+
Sbjct: 733 WLHKASRRRRYREYVVKNEVILHAGDTINEFGWDNKHAGINVLISKEVLMGRAEYFESFK 554
Query: 856 VNADNFMCTLLPGISN 809
NAD+F+C++LPGIS+
Sbjct: 553 QNADDFICSILPGISH 506
Score = 143 bits (306), Expect(2) = 1e-072
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = -1 / -2
Query: 811 NHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRV 632
+HPQ+QYSPGGL+FK G SNMQHVT LSFLLLAYS+YLSHA V CG ++ASP L+++
Sbjct: 511 SHPQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSSYLSHANKVVPCGETTASPALLKQL 332
Query: 631 AKRQVDYILGDNPLRMSYMVGYG 563
AKRQVDYILGDNPL M+ ++ G
Sbjct: 331 AKRQVDYILGDNPLEMTILMMTG 263
Score = 105 bits (223), Expect(2) = 3e-043
Identities = 47/75 (62%), Positives = 52/75 (69%)
Frame = +3 / +3
Query: 813 EMPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLL 992
E+PG +K SA KD KYS+ PI TS EMRTLMPACLLS PNSLM S A + TSF
Sbjct: 510 EIPGNIEQIKSSAFCLKDSKYSALPINTSLEMRTLMPACLLSHPNSLMVSPACNITSFFT 689
Query: 993 MYSRYSRRRVALCSH 1037
YS Y RRR ALC+H
Sbjct: 690 TYSLYLRRREALCNH 734
Score = 91.3 bits (193), Expect(2) = 3e-043
Identities = 45/70 (64%), Positives = 46/70 (65%)
Frame = +3 / +3
Query: 585 IRSGLSPSM*STCRLATRRSCTGDADDEPHETRPPAWLR*LE*ASRRNDSCVTCCMLLLP 764
I SGLSP M*ST RLA G+A PH T AWLR*LE*A R D VTCCMLL P
Sbjct: 285 ISSGLSPRM*ST*RLANCLRRAGEAVVSPHGTTLLAWLR*LE*AKSRKDKDVTCCMLLPP 464
Query: 765 TLNSSPPGEY 794
LN SPPGEY
Sbjct: 465 ALNISPPGEY 494
>gb|CX658587.1|CX658587 PO01036G06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01036G06 5', mRNA sequence
Length = 735
Score = 191 bits (411), Expect(3) = 2e-070
Identities = 74/131 (56%), Positives = 94/131 (71%)
Frame = -1 / +2
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGL +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+
Sbjct: 191 QAQYTPGGLFYKATESNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKK 370
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNP +MSYMVG+G ++P+ +HHR SS+PS+ AHP RI C G Y S +PNP
Sbjct: 371 QVDYILGDNPAKMSYMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNP 550
Query: 442 NLLVGAVVGGP 410
N+LVGA+VGGP
Sbjct: 551 NVLVGAIVGGP 583
Score = 62.5 bits (130), Expect(3) = 2e-070
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = -1 / +2
Query: 994 IKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLPGI 815
I+ N +G+ D F WD+K G +L+SKE L E FQ ++ ++DN++C+L+PG
Sbjct: 2 IQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKEFLDKTTEEFQIYKSHSDNYICSLMPGS 181
Query: 814 SN 809
S+
Sbjct: 182 SS 187
Score = 52.8 bits (109), Expect(3) = 2e-070
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = -1 / +2
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
G D+ D F D R +QQSEP YINAP +G LA+FSA
Sbjct: 575 GGPDNRDHFADDRNNYQQSEPAIYINAPFVGALAFFSA 688
>gb|CA930454.1|CA930454 MTU4CA.P22.G09 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 585
Score = 210 bits (452), Expect(3) = 3e-067
Identities = 81/138 (58%), Positives = 102/138 (73%)
Frame = -1 / +1
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S+ I+YSPGGL++K G SN+QH T +SFLL++Y+NYL V+CG + P LR+
Sbjct: 43 SSSSHIEYSPGGLIYKPGGSNLQHATTISFLLVSYANYLERTSQAVNCGDVNVGPYSLRQ 222
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSP 455
AKRQVDYILGDNP+ +SYMVGY R+P+RIHHR SSLPSV HP I CK G+ Y+ S
Sbjct: 223 QAKRQVDYILGDNPMGLSYMVGYSDRYPQRIHHRGSSLPSVKDHPEFIACKEGSVYFNSS 402
Query: 454 APNPNLLVGAVVGGPTDD 401
PNPN+ VGA+VGGP+ D
Sbjct: 403 NPNPNVHVGAIVGGPSQD 456
Score = 58.3 bits (121), Expect(3) = 3e-067
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -1 / +1
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPN 293
G D++ D R F++SEPTTYINAP +G+LAYF+A+P+
Sbjct: 439 GGPSQDDSYDDNRDDFRKSEPTTYINAPFVGVLAYFAANPS 561
Score = 27.2 bits (53), Expect(3) = 3e-067
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -1 / +1
Query: 859 RVNADNFMCTLLPGISN 809
+ +AD+FMCTL+P S+
Sbjct: 1 KASADSFMCTLIPESSS 51
>gb|CV267046.1|CV267046 WS02030.B21_K22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_K22 3', mRNA sequence
Length = 946
Score = 192 bits (414), Expect(2) = 2e-066
Identities = 77/151 (50%), Positives = 99/151 (65%)
Frame = -1 / -1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGL +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+
Sbjct: 712 QAQYTPGGLFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGSTVTAESLIAQAKK 533
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNP RMSYMVG+G R+P+ +HHR SS+PS+ AHP RI C G + S +PNP
Sbjct: 532 QVDYILGDNPARMSYMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNP 353
Query: 442 NLLVGAVVGGPTDDSDAFPDARAVFQQSEPT 350
N+LVGA++GGP + + D Q T
Sbjct: 352 NVLVGAIIGGPDNRDNFADDRNNYQQSEPAT 260
Score = 81.3 bits (171), Expect(2) = 2e-066
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = -1 / -1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
+W+H+A++ Y YI+ N +G+ D F WD+K G +L+SKE L E FQ +
Sbjct: 946 SWIHRASQNGSYLTYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKEFLEKTTEEFQLY 767
Query: 859 RVNADNFMCTLLPGISN 809
+ ++DN++C+L+PG S+
Sbjct: 766 KSHSDNYICSLIPGTSS 716
>gb|DT520699.1|DT520699 WS02448.B21_E15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02448_E15 3', mRNA sequence
Length = 629
Score = 198 bits (426), Expect(2) = 1e-064
Identities = 84/123 (68%), Positives = 95/123 (77%)
Frame = -1 / -2
Query: 778 LLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGD 599
L+FK G SNMQHVT LSFLLLAYS+YLSHA V CG ++ASP +++AKRQVD I GD
Sbjct: 610 LIFKAGGSNMQHVTFLSFLLLAYSSYLSHANKVVPCGETTASPALFKQLAKRQVDSIFGD 431
Query: 598 NPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVV 419
NPL MSYMVGYG R+P I R SSLPSV AHPARI CK G+ Y+ SP PNPN+ GAVV
Sbjct: 430 NPLGMSYMVGYGPRYPLGIPPRGSSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHGGAVV 251
Query: 418 GGP 410
GGP
Sbjct: 250 GGP 242
Score = 121 bits (259), Expect(2) = 7e-033
Identities = 59/96 (61%), Positives = 62/96 (64%)
Frame = +3 / +3
Query: 492 IRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEP 671
+RAGCA TDGSEL I RG R PYPTMYDI GLSP M ST RLA G+A P
Sbjct: 324 MRAGCACTDGSELPLGGIPRG*RGPYPTMYDIPRGLSPKMEST*RLANCLKRAGEAVVSP 503
Query: 672 HETRPPAWLR*LE*ASRRNDSCVTCCMLLLPTLNSS 779
H T AWL+*LE*A R D VTCCMLL P LN S
Sbjct: 504 HGTTLLAWLK*LE*AKSRKDKNVTCCMLLPPALNIS 611
Score = 69.8 bits (146), Expect(2) = 1e-064
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = -1 / -2
Query: 430 GAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHP 296
G V G + D FPD+R FQ+SEP TYINAPL+GLLAYFSA P
Sbjct: 265 GGAVVGGPNIPDVFPDSRPFFQESEPPTYINAPLVGLLAYFSAPP 131
Score = 40.0 bits (81), Expect(2) = 7e-033
Identities = 24/52 (46%), Positives = 24/52 (46%)
Frame = +3 / +3
Query: 276 PPDSAGLGCAEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPTTAP 431
P S G AEK A RP GALM V GSD SGK S P T P
Sbjct: 111 PFHSGNQGGAEKYASRPTKGALM*VGGSDS*KNGLESGKTSGMLGPPTTAPP 266
>gb|CV272757.1|CV272757 WS0158.B21_J18 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_J18 3', mRNA sequence
Length = 917
Score = 197 bits (425), Expect(2) = 6e-064
Identities = 81/174 (46%), Positives = 114/174 (65%)
Frame = -1 / -2
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ SN+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 694 SPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLY 515
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSP 455
VAKRQVDYILG+NP+RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G +
Sbjct: 514 VAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHS 335
Query: 454 APNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPN 293
A ++ + G + +D +PD R+ + SEP TYINA ++G LAYF+ N
Sbjct: 334 ANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFAGTLN 173
Score = 68.0 bits (142), Expect(2) = 6e-064
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = -1 / -2
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
LGA D + F WDNK+AG +VL+S+ L+ D+ F+ F A+NFMC +LP
Sbjct: 850 LGADDQPDLFSWDNKYAGAHVLLSRRALLNNDKNFEQFEGEAENFMCRILP 698
>gb|BU877721.1|BU877721 V038bE02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 600
Score = 149 bits (321), Expect(3) = 3e-063
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -1 / +2
Query: 1036 WLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFR 857
WLHKA+RRR YREY+ +NEV+L A D INEFGWDNKHAGINVLISKEVLMG+ EYF SF+
Sbjct: 335 WLHKASRRRRYREYVVKNEVILHAGDTINEFGWDNKHAGINVLISKEVLMGRAEYFGSFK 514
Query: 856 VNADNFMCTLLPGISN 809
NAD+F+C++LPGIS+
Sbjct: 515 QNADDFICSILPGISH 562
Score = 104 bits (222), Expect(3) = 7e-036
Identities = 47/75 (62%), Positives = 52/75 (69%)
Frame = +3 / -1
Query: 813 EMPGRRVHMKLSALTRKDWKYSSFPIRTSFEMRTLMPACLLSQPNSLMASLAPSTTSFLL 992
E+PG +K SA KD KYS+ PI TS EMRTLMPACLLS PNSLM S A + TSF
Sbjct: 558 EIPGNIEQIKSSAFCLKDPKYSALPINTSLEMRTLMPACLLSHPNSLMVSPACNITSFFT 379
Query: 993 MYSRYSRRRVALCSH 1037
YS Y RRR ALC+H
Sbjct: 378 TYSLYLRRREALCNH 334
Score = 96.8 bits (205), Expect(3) = 3e-063
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = -2 / +2
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
SIVFR DPAYS+ LL+RAV VF+FAD++RG YS SL +AVCP YCD +G QDELL
Sbjct: 155 SIVFRSRDPAYSRLLLNRAVRVFDFADRHRGAYSGSLRSAVCPFYCDVNGCQDELL 322
Score = 62.0 bits (129), Expect(3) = 7e-036
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = +2 / -1
Query: 1064 WYPE*SQ*QGHTAAWRLLL*GPRYLSANSNTATARSRRRLE*AGSASRKTME 1219
W P SQ*+GHTA +L L PR LSA S T TAR R LE*AGS R TM+
Sbjct: 309 WQPFTSQ*KGHTAERKLPLYAPRCLSAKSKTLTARLRSNLE*AGSRERNTMD 154
Score = 35.4 bits (71), Expect(3) = 3e-063
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1 / +2
Query: 811 NHPQIQYSPGGLLF 770
+HPQ+QYSPGGL+F
Sbjct: 557 SHPQVQYSPGGLIF 598
Score = 23.1 bits (44), Expect(3) = 7e-036
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / -1
Query: 768 LNSSPPGEY 794
LN SPPGEY
Sbjct: 600 LNISPPGEY 574
>gb|CX659368.1|CX659368 PO01029H05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01029H05 5', mRNA sequence
Length = 698
Score = 195 bits (420), Expect(2) = 6e-063
Identities = 79/170 (46%), Positives = 113/170 (66%)
Frame = -1 / +3
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ +N+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 189 SPYKTTQYTQGGLMYKLPENNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLIY 368
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSP 455
VAKRQVDYILG+NP+RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G +
Sbjct: 369 VAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHS 548
Query: 454 APNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
A ++ + G + +D +PD R+ + SEP TYINA ++G LAYF+
Sbjct: 549 ANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFA 698
Score = 67.0 bits (140), Expect(2) = 6e-063
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
LGA D + F WDNK+AG++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 33 LGADDQPDLFSWDNKYAGVHVLLSRRALLNNDKNFEQFEA*AESFMCRILP 185
>gb|CV270742.1|CV270742 WS0152.B21_M22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0152_M22 3', mRNA sequence
Length = 904
Score = 135 bits (290), Expect(3) = 1e-062
Identities = 52/71 (73%), Positives = 59/71 (83%)
Frame = -1 / -2
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILG NPL+MSYMVGYG++FPR+IHHR SSLPSV HPA I C+ G Y+ S PNP
Sbjct: 438 QVDYILGTNPLKMSYMVGYGSKFPRKIHHRGSSLPSVDQHPASINCQGGTPYFQSNDPNP 259
Query: 442 NLLVGAVVGGP 410
NLL+GAVVGGP
Sbjct: 258 NLLIGAVVGGP 226
Score = 83.1 bits (175), Expect(3) = 1e-062
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = -1 / -1
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
+ YSPGGLLFK G SN+QH T LSFLLLAY+ YL+ + + CG+ A+P +L + A+ Q
Sbjct: 715 VSYSPGGLLFKPGGSNLQHATALSFLLLAYARYLNQSNREIHCGNVVATPARLIQFARGQ 536
Query: 619 V 617
V
Sbjct: 535 V 533
Score = 67.0 bits (140), Expect(5) = 8e-029
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = +3 / +2
Query: 486 QPIRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STC 623
Q + AGC +T+G + RW I RGN PYPTMYDI +GL P M*STC
Sbjct: 302 QLMLAGC*STEGRDEPRWCIFRGNLLPYPTMYDIFNGLVPRM*STC 439
Score = 61.1 bits (127), Expect(3) = 1e-062
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -1 / -1
Query: 949 EFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
EFGWD K+AGIN+L+SK +L K F NAD F+CT+LP
Sbjct: 862 EFGWDTKNAGINILVSKLLLSSKTSDVGPFIPNADKFVCTVLP 734
Score = 48.3 bits (99), Expect(5) = 8e-029
Identities = 21/32 (65%), Positives = 21/32 (65%)
Frame = +3 / +3
Query: 699 R*LE*ASRRNDSCVTCCMLLLPTLNSSPPGEY 794
R* *A RR D V CC LL P LN SPPGEY
Sbjct: 615 R*RA*ARRRKDKAVACCKLLPPGLNRSPPGEY 710
Score = 43.2 bits (88), Expect(5) = 8e-029
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +3 / +2
Query: 291 GLGCAEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
G GC K*A+RP GAL+YVVGS C +A S S S P T
Sbjct: 110 GGGCDLK*AKRPTRGALIYVVGSVCTKSALESE*ESPLSGPPTT 241
Score = 25.4 bits (49), Expect(5) = 8e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 411 GPPTTAPTSR 440
GPPTTAP SR
Sbjct: 227 GPPTTAPISR 256
Score = 23.5 bits (45), Expect(5) = 8e-029
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 897 SFEMRTLMPACLLSQPN 947
+FE L+PA L+S PN
Sbjct: 810 NFETSMLIPAFLVSHPN 860
>gb|CX654603.1|CX654603 PO02018B07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02018B07 5', mRNA sequence
Length = 635
Score = 113 bits (241), Expect(3) = 1e-062
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGG +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+
Sbjct: 388 QAQYTPGGFFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGSTGTAESLIAQAKK 567
Query: 622 QVDYILGDNPLRMSYMVGYGAR 557
QVDYILGDNP RMSYMVG+G R
Sbjct: 568 QVDYILGDNPPRMSYMVGFGNR 633
Score = 85.8 bits (181), Expect(3) = 1e-062
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = -2 / +1
Query: 1194 PAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
P+YS +LL A+ VF+FAD+YRG YS+SL++ VCP YC YSGYQDELL
Sbjct: 1 PSYSTKLLHTAMKVFDFADRYRGSYSNSLNSVVCPFYCSYSGYQDELL 144
Score = 80.8 bits (170), Expect(3) = 1e-062
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = -1 / +1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
+W+H+A++ Y YI+ N +G+ D F WD+K G +L+SKE L E FQ +
Sbjct: 154 SWIHRASQNGSYLTYIQSNGHTMGSDDDDYSFXWDDKRPGTKILLSKEFLEKTTEEFQLY 333
Query: 859 RVNADNFMCTLLPGISN 809
+ ++DN++C+L+PG S+
Sbjct: 334 KSHSDNYICSLIPGTSS 384
>gb|CA925970.1|CA925970 MTU7TL.P8.D02 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 689
Score = 175 bits (376), Expect(2) = 5e-061
Identities = 68/125 (54%), Positives = 87/125 (69%)
Frame = -1 / +2
Query: 784 GGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYIL 605
GG +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+QVDYIL
Sbjct: 287 GGFFYKATESNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYIL 466
Query: 604 GDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGA 425
GDNP +MSYMVG+G ++P+ +HHR SS+PS+ AHP RI C G Y S +PNPN+LVGA
Sbjct: 467 GDNPAKMSYMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNPNVLVGA 646
Query: 424 VVGGP 410
+V GP
Sbjct: 647 IVXGP 661
Score = 80.8 bits (170), Expect(2) = 5e-061
Identities = 31/77 (40%), Positives = 48/77 (62%)
Frame = -1 / +1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
+WLHKA+ Y YI+ N +G+ D F WD+K G +L+SKE L E FQ +
Sbjct: 34 SWLHKASLNGTYLAYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKEFLDKTTEEFQIY 213
Query: 859 RVNADNFMCTLLPGISN 809
+ ++DN++C+L+PG S+
Sbjct: 214 KSHSDNYICSLIPGSSS 264
>gb|DT470365.1|DT470365 WS01920.C21_K15 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_K15 3', mRNA sequence
Length = 519
Score = 166 bits (356), Expect(2) = 3e-057
Identities = 66/90 (73%), Positives = 75/90 (83%)
Frame = -1 / -2
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V CG ++ASP L+++AKRQVDYILGDNPL MSYMVGYG R+P RIHHR SSLPSV AHP
Sbjct: 515 VPCGETTASPALLKQLAKRQVDYILGDNPLGMSYMVGYGPRYPLRIHHRGSSLPSVQAHP 336
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGP 410
ARI CK G+ Y+ SP PNPN+ VGAVVGGP
Sbjct: 335 ARIRCKEGSRYFLSPNPNPNVHVGAVVGGP 246
Score = 92.7 bits (196), Expect(3) = 4e-027
Identities = 41/63 (65%), Positives = 44/63 (69%)
Frame = +3 / +1
Query: 492 IRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDADDEP 671
+RAGCA TDGSEL WWI G R PYPTMYDI SGLSP M*ST RLA+ G+A P
Sbjct: 328 MRAGCACTDGSELPLWWILSG*RGPYPTMYDIPSGLSPRM*ST*RLASCLRRAGEAVVSP 507
Query: 672 HET 680
H T
Sbjct: 508 HGT 516
Score = 77.1 bits (162), Expect(2) = 3e-057
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1 / -2
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHP 296
V G + +DAFPD+R FQ+SEPTTYINAPL+GLLAYFSAHP
Sbjct: 260 VVGGPNITDAFPDSRPFFQESEPTTYINAPLVGLLAYFSAHP 135
Score = 42.8 bits (87), Expect(3) = 4e-027
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +3 / +1
Query: 276 PPDSAGLGCAEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
P S G AEK A RP GALM VVGSD SGKAS P T
Sbjct: 115 PFHSGNQGWAEKYASRPTKGALM*VVGSDS*KNGLESGKASVMLGPPTT 261
Score = 24.4 bits (47), Expect(3) = 4e-027
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +1
Query: 408 VGPPTTAPT 434
+GPPTTAPT
Sbjct: 244 LGPPTTAPT 270
>gb|CV256402.1|CV256402 WS0243.B21_L24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_L24 3', mRNA sequence
Length = 481
Score = 160 bits (344), Expect(2) = 1e-055
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = -1 / -1
Query: 670 GSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARI 491
G ++ASP L+++AKRQVDYILGDNPL MSYMVGYG R+P RIHHR SSLPSV AHPARI
Sbjct: 481 GETTASPALLKQLAKRQVDYILGDNPLGMSYMVGYGPRYPLRIHHRGSSLPSVQAHPARI 302
Query: 490 GCKAGAAYYTSPAPNPNLLVGAVVGGP 410
CK G+ Y+ SP PNPN+ VGAVVGGP
Sbjct: 301 RCKEGSRYFLSPNPNPNVHVGAVVGGP 221
Score = 86.8 bits (183), Expect(3) = 2e-025
Identities = 38/56 (67%), Positives = 40/56 (71%)
Frame = +3 / +3
Query: 492 IRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLSPSM*STCRLATRRSCTGDA 659
+RAGCA TDGSEL WWI G R PYPTMYDI SGLSP M*ST RLA G+A
Sbjct: 303 MRAGCACTDGSELPLWWILSG*RGPYPTMYDIPSGLSPRM*ST*RLANCLRRAGEA 470
Score = 77.1 bits (162), Expect(2) = 1e-055
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1 / -1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHP 296
V G + +DAFPD+R FQ+SEPTTYINAPL+GLLAYFSAHP
Sbjct: 235 VVGGPNITDAFPDSRPFFQESEPTTYINAPLVGLLAYFSAHP 110
Score = 42.8 bits (87), Expect(3) = 2e-025
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +3 / +3
Query: 276 PPDSAGLGCAEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
P S G AEK A RP GALM VVGSD SGKAS P T
Sbjct: 90 PFHSGNQGWAEKYASRPTKGALM*VVGSDS*KNGLESGKASVMLGPPTT 236
Score = 24.4 bits (47), Expect(3) = 2e-025
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 408 VGPPTTAPT 434
+GPPTTAPT
Sbjct: 219 LGPPTTAPT 245
>gb|CX657081.1|CX657081 PO02059C06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02059C06 5', mRNA sequence
Length = 637
Score = 166 bits (356), Expect(2) = 9e-055
Identities = 68/154 (44%), Positives = 98/154 (63%)
Frame = -1 / +1
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ +N+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 172 SPYKTTQYTQGGLMYKLPENNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLY 351
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSP 455
VAKRQVDYILG+NP+RMS MVG+G FP+RIHHR SSLPS+A+HP IGC +G +
Sbjct: 352 VAKRQVDYILGENPIRMSXMVGFGPNFPKRIHHRGSSLPSLASHPKAIGCDSGFEPFFHS 531
Query: 454 APNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEP 353
A ++ + G +D +PD R+ + SEP
Sbjct: 532 ANPNP*ILTGAIVGGPHQNDGYPDERSDYTHSEP 633
Score = 68.9 bits (144), Expect(2) = 9e-055
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +1
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
LGA D + F WDNK+AG++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 16 LGADDQPDLFSWDNKYAGVHVLLSRRALLNNDKNFEQFEAEAESFMCRILP 168
>gb|CX653604.1|CX653604 PO02004D08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02004D08 5', mRNA sequence
Length = 603
Score = 187 bits (402), Expect(2) = 1e-053
Identities = 75/164 (45%), Positives = 108/164 (65%)
Frame = -1 / +3
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ +N+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 108 SPYKTTQYTQGGLMYKLPENNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLY 287
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSP 455
VAKRQVDYILG+NP+RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G +
Sbjct: 288 VAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHS 467
Query: 454 APNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMG 323
A ++ + G + +D +PD R+ + SEP TYINA ++G
Sbjct: 468 ANPNPNILTGAIVGGPNQNDGYPDKRSDYSHSEPATYINAAMVG 599
Score = 44.1 bits (90), Expect(2) = 1e-053
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -1 / +3
Query: 922 GINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
G++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 3 GVHVLLSRRALLNNDKNFEQFEAEAESFMCRILP 104
>gb|DT514735.1|DT514735 WS02425.B21_K05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_K05 3', mRNA sequence
Length = 840
Score = 199 bits (429), Expect(2) = 2e-053
Identities = 82/174 (47%), Positives = 115/174 (66%)
Frame = -1 / -1
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ SN+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 759 SPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLY 580
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSP 455
VAKRQVDYILG+NP+RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G +
Sbjct: 579 VAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHS 400
Query: 454 APNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPN 293
A ++ + G + +D +PD R+ + SEP TYINA ++G LAYF+A N
Sbjct: 399 ANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFAATLN 238
Score = 30.9 bits (61), Expect(2) = 2e-053
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1 / -1
Query: 892 LMGKDEYFQSFRVNADNFMCTLLP 821
L+ D+ F+ F A++FMC +LP
Sbjct: 834 LLNNDKNFEQFEGEAESFMCRILP 763
>gb|CX654407.1|CX654407 PO02004C07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02004C07 5', mRNA sequence
Length = 638
Score = 174 bits (375), Expect(2) = 2e-053
Identities = 68/123 (55%), Positives = 87/123 (70%)
Frame = -1 / +1
Query: 778 LLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGD 599
L +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+QVDYILGD
Sbjct: 1 LFYKATESNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYILGD 180
Query: 598 NPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVV 419
NP +MSYMVG+G ++P+ +HHR SS+PS+ AHP RI C G Y S +PNPN+LVGA+V
Sbjct: 181 NPAKMSYMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNPNVLVGAIV 360
Query: 418 GGP 410
GGP
Sbjct: 361 GGP 369
Score = 55.6 bits (115), Expect(2) = 2e-053
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -1 / +1
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
G D+ D F D R +QQSEP TYINAP +G LA+FSA
Sbjct: 361 GGPDNRDHFADDRNNYQQSEPATYINAPFVGALAFFSA 474
>gb|BI129171.1|BI129171 G086P82Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 509
Score = 154 bits (330), Expect(2) = 5e-051
Identities = 60/113 (53%), Positives = 81/113 (71%)
Frame = -1 / +3
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ SN+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 165 SPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLY 344
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAG 476
VAKRQVDYILG+NP+RMSYMVG+G P+RIHHR SSLPS+A+HP IGC +G
Sbjct: 345 VAKRQVDYILGENPIRMSYMVGFGPNLPKRIHHRGSSLPSLASHPQAIGCDSG 503
Score = 68.4 bits (143), Expect(2) = 5e-051
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
LGA D + F WDNK+AG++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 9 LGADDQADLFSWDNKYAGVHVLLSRRALLNNDKNFEQFEGEAESFMCRILP 161
>gb|CX657483.1|CX657483 PO02048A07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02048A07 5', mRNA sequence
Length = 594
Score = 192 bits (413), Expect(2) = 3e-050
Identities = 74/131 (56%), Positives = 94/131 (71%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGL +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+
Sbjct: 61 QAQYTPGGLFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGSTVTAESLIAQAKK 240
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNP RMSYMVG+G R+P+ +HHR SS+PS+ AHP RI C G + S +PNP
Sbjct: 241 QVDYILGDNPARMSYMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFQFLYSSSPNP 420
Query: 442 NLLVGAVVGGP 410
N+LVGA++GGP
Sbjct: 421 NVLVGAIIGGP 453
Score = 27.6 bits (54), Expect(2) = 3e-050
Identities = 7/18 (38%), Positives = 16/18 (88%)
Frame = -1 / +1
Query: 862 FRVNADNFMCTLLPGISN 809
++ ++DN++C+L+PG S+
Sbjct: 4 YKSHSDNYICSLIPGTSS 57
>gb|CX657360.1|CX657360 PO02043C07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02043C07 5', mRNA sequence
Length = 620
Score = 97.3 bits (206), Expect(3) = 6e-050
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = -1 / +3
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ +N+Q+VT ++FLL Y+ + +CG+ +P L
Sbjct: 369 SPYKTTQYTQGGLMYKLPENNLQYVTSITFLLTTYAKXMKATRHTFNCGNLLVTPNSLLY 548
Query: 634 VAKRQVDYILGDNPLRMSYMVGYG 563
VAKRQVDYILG+NP+RMSYMV +G
Sbjct: 549 VAKRQVDYILGENPIRMSYMVRFG 620
Score = 71.2 bits (149), Expect(3) = 6e-050
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = -2 / +3
Query: 1197 DPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
D YS LL A VF+FA +Y+G YS SL +AVCP YC YSGY+DELL
Sbjct: 3 DRKYSALLLRTARKVFQFAMQYQGAYSDSLGSAVCPFYCSYSGYKDELL 149
Score = 68.9 bits (144), Expect(3) = 6e-050
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
LGA D + F WDNK+AG++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 213 LGADDQPDLFSWDNKYAGVHVLLSRRALLNNDKNFEQFEAEAESFMCRILP 365
>gb|CX655130.1|CX655130 PO02030C08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02030C08 5', mRNA sequence
Length = 644
Score = 130 bits (279), Expect(3) = 1e-049
Identities = 50/93 (53%), Positives = 66/93 (70%)
Frame = -1 / +1
Query: 778 LLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGD 599
L +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+QVDYILGD
Sbjct: 1 LFYKATESNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYILGD 180
Query: 598 NPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
NP +MSYMVG+G ++P+ +HHR SS+PS+ AHP
Sbjct: 181 NPAKMSYMVGFGNKYPQHVHHRGSSVPSIHAHP 279
Score = 55.6 bits (115), Expect(3) = 1e-049
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -1 / +2
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
G D+ D F D R +QQSEP TYINAP +G LA+FSA
Sbjct: 362 GGPDNRDHFADDRNNYQQSEPATYINAPFVGALAFFSA 475
Score = 50.1 bits (103), Expect(3) = 1e-049
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -1 / +2
Query: 502 PARIGCKAGAAYYTSPAPNPNLLVGAVVGGP 410
P RI C G Y S +PNPN+LVGA+VGGP
Sbjct: 278 PNRISCNDGFQYLYSSSPNPNVLVGAIVGGP 370
>gb|DN499693.1|DN499693 T078C12.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T078C12 5', mRNA sequence
Length = 754
Score = 160 bits (345), Expect(2) = 1e-049
Identities = 59/92 (64%), Positives = 79/92 (85%)
Frame = -1 / +1
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V+CG+++ +P +LR +AK+QVDY+LGDNPL+MSYMVGYG R+P+RIHHR SSLPS+AAHP
Sbjct: 34 VNCGATAVTPKRLRNIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSMAAHP 213
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTD 404
A+I C +G + S +PNPN+LVGA+VGGP +
Sbjct: 214 AKIQCSSGFSVMKSQSPNPNILVGAIVGGPDE 309
Score = 57.0 bits (118), Expect(2) = 1e-049
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = -1 / +1
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
G D+ D FPD R+ ++QSEP TY+NAPL+G LAY +
Sbjct: 295 GGPDEHDRFPDERSDYEQSEPATYMNAPLVGALAYLA 405
>gb|CA932223.1|CA932223 MTU5CS.P10.B12 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 663
Score = 160 bits (345), Expect(2) = 1e-049
Identities = 59/92 (64%), Positives = 79/92 (85%)
Frame = -1 / +1
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V+CG+++ +P +LR +AK+QVDY+LGDNPL+MSYMVGYG R+P+RIHHR SSLPS+AAHP
Sbjct: 22 VNCGATAVTPKRLRNIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSMAAHP 201
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTD 404
A+I C +G + S +PNPN+LVGA+VGGP +
Sbjct: 202 AKIQCSSGFSVMKSQSPNPNILVGAIVGGPDE 297
Score = 57.0 bits (118), Expect(2) = 1e-049
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = -1 / +1
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
G D+ D FPD R+ ++QSEP TY+NAPL+G LAY +
Sbjct: 283 GGPDEHDRFPDERSDYEQSEPATYMNAPLVGALAYLA 393
>gb|CX660404.1|CX660404 PO01032G03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01032G03 5', mRNA sequence
Length = 619
Score = 122 bits (261), Expect(3) = 2e-049
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = -1 / +1
Query: 787 PGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYI 608
PGG +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+QVDYI
Sbjct: 268 PGGFFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGSTVTAESLIAQAKKQVDYI 447
Query: 607 LGDNPLRMSYMVGYGARFPRRIHHR 533
LGDNP RMSYMVG+G R+P+ +HHR
Sbjct: 448 LGDNPARMSYMVGFGNRYPQHVHHR 522
Score = 82.6 bits (174), Expect(3) = 2e-049
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = -1 / +3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
+W+H+A++ Y YI+ N +G+ D + F WD+K G +L+SKE L E FQ +
Sbjct: 18 SWIHRASQNGSYLTYIQSNGHTMGSDDDDHSFSWDDKRPGTKILLSKEFLEKTTEEFQLY 197
Query: 859 RVNADNFMCTLLPGISN 809
+ ++DN++C+L+PG S+
Sbjct: 198 KSHSDNYICSLIPGTSS 248
Score = 30.4 bits (60), Expect(3) = 2e-049
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / +2
Query: 529 SSLPSVAAHPARIGCKAG 476
SS+PS+ AHP RI C G
Sbjct: 527 SSVPSIHAHPNRISCNDG 580
>gb|CA932541.1|CA932541 MTU5CS.P14.D02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 677
Score = 158 bits (340), Expect(2) = 5e-049
Identities = 58/92 (63%), Positives = 79/92 (85%)
Frame = -1 / +1
Query: 679 VSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHP 500
V+CG+++ +P +LR +AK+QVDY+LGDNPL+MSYMVGYG R+P+RIHHR SSLPS+AAHP
Sbjct: 22 VNCGATAVTPKRLRNIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSMAAHP 201
Query: 499 ARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTD 404
A+I C +G + S +P+PN+LVGA+VGGP +
Sbjct: 202 AKIQCSSGFSVMKSQSPDPNILVGAIVGGPDE 297
Score = 57.0 bits (118), Expect(2) = 5e-049
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = -1 / +1
Query: 415 GPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
G D+ D FPD R+ ++QSEP TY+NAPL+G LAY +
Sbjct: 283 GGPDEHDRFPDERSDYEQSEPATYMNAPLVGALAYLA 393
>gb|CK087641.1|CK087641 A016P51.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A016P51 3', mRNA sequence
Length = 835
Score = 195 bits (420), Expect = 5e-049
Identities = 80/168 (47%), Positives = 112/168 (66%)
Frame = -1 / -3
Query: 796 QYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQV 617
QY+ GGL++K+ SN+Q+VT ++FLL Y+ Y+ +CG+ +P L VAKRQV
Sbjct: 674 QYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQV 495
Query: 616 DYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNL 437
DYILG+NP+ MSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G + A
Sbjct: 494 DYILGENPIIMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHSANPNPN 315
Query: 436 LVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPN 293
++ + G + +D +PD R+ + SEP TYINA ++G LAYF+A N
Sbjct: 314 ILTGAIVGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFAATLN 171
>gb|CX655743.1|CX655743 PO02039D08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02039D08 5', mRNA sequence
Length = 581
Score = 170 bits (366), Expect(2) = 1e-048
Identities = 69/154 (44%), Positives = 100/154 (64%)
Frame = -1 / +3
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ +N+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 120 SPYKTTQYTQGGLMYKLPENNLQYVTSITFLLNTYAKYMKATRHTFNCGNLLVTPNSLLY 299
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSP 455
VAKRQVDYILG+NP+RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G +
Sbjct: 300 VAKRQVDYILGENPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHS 479
Query: 454 APNPNLLVGAVVGGPTDDSDAFPDARAVFQQSEP 353
A ++ + G + +D +PD R+ + SEP
Sbjct: 480 ANPNPNILTGAIVGGPNQNDGYPDERSDYSHSEP 581
Score = 44.1 bits (90), Expect(2) = 1e-048
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -1 / +3
Query: 922 GINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
G++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 15 GVHVLLSRRALLNNDKNFEQFEAEAESFMCRILP 116
>gb|CX657584.1|CX657584 PO02055D09 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO02055D09 5', mRNA sequence
Length = 548
Score = 88.6 bits (187), Expect(3) = 1e-048
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -2 / +3
Query: 1197 DPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
DP+YS +LL A+ VF+FAD+YRG YS+SL++ VCP YC YSGYQDELL
Sbjct: 3 DPSYSTKLLHTAMKVFDFADRYRGSYSNSLNSVVCPFYCSYSGYQDELL 149
Score = 81.3 bits (171), Expect(3) = 1e-048
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = -1 / +3
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
+W+H+A++ Y YI+ N +G+ D + F WD+K G +L+SKE L E FQ +
Sbjct: 159 SWIHRASQNGSYLTYIQSNGHTMGSDDDDHSFXWDDKRPGTKILLSKEFLEKTTEEFQLY 338
Query: 859 RVNADNFMCTLLPGISN 809
+ ++DN++C+L+PG S+
Sbjct: 339 KSHSDNYICSLIPGNSS 389
Score = 62.9 bits (131), Expect(3) = 1e-048
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = -1 / +3
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSAS 653
Q QY+PGGL K SN+++VT FLLLAY+ YL GG CG S+ +
Sbjct: 393 QAQYTPGGLF*KASESNLEYVTSKXFLLLAYAKYLGSNGGVARCGGSTVT 542
>gb|CX654638.1|CX654638 PO02057C11 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO02057C11 5', mRNA sequence
Length = 534
Score = 85.8 bits (181), Expect(3) = 3e-048
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = -2 / +1
Query: 1194 PAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
P+YS +LL A+ VF+FAD+YRG YS+SL++ VCP YC YSGYQDELL
Sbjct: 1 PSYSTKLLHTAMKVFDFADRYRGSYSNSLNSVVCPFYCSYSGYQDELL 144
Score = 81.3 bits (171), Expect(3) = 3e-048
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = -1 / +1
Query: 1039 AWLHKATRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSF 860
+W+H+A++ Y YI+ N +G+ D F WD+K G +L+SKE L E FQ +
Sbjct: 154 SWIHRASQNGSYLTYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKEFLEKTTEEFQLY 333
Query: 859 RVNADNFMCTLLPGISN 809
+ ++DN++C+L+PG S+
Sbjct: 334 KSHSDNYICSLIPGTSS 384
Score = 64.3 bits (134), Expect(3) = 3e-048
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSS 659
Q QY+PGG +K SN+Q+VT +FLLL Y+ YL GG CG S+
Sbjct: 388 QAQYTPGGFFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGST 531
>gb|CX655795.1|CX655795 PO02040B08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02040B08 5', mRNA sequence
Length = 460
Score = 182 bits (392), Expect(2) = 2e-047
Identities = 72/131 (54%), Positives = 90/131 (68%)
Frame = -1 / +1
Query: 802 QIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKR 623
Q QY+PGGL +K SN+Q+VT +FLLL Y+ YL GG CG S+ + L AK+
Sbjct: 61 QAQYTPGGLFYKASESNLQYVTSTTFLLLTYAKYLGSNGGVARCGGSTVTAESLIAQAKK 240
Query: 622 QVDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNP 443
QVDYILGDNP RMSYMVG+G R+P+ +HHR SS+PS+ AHP RI C G S PNP
Sbjct: 241 QVDYILGDNPARMSYMVGFGNRYPQHVHHRGSSVPSIHAHPNRISCNDGFHSLYSTPPNP 420
Query: 442 NLLVGAVVGGP 410
N+LVG ++ GP
Sbjct: 421 NVLVGPIIRGP 453
Score = 27.6 bits (54), Expect(2) = 2e-047
Identities = 7/18 (38%), Positives = 16/18 (88%)
Frame = -1 / +1
Query: 862 FRVNADNFMCTLLPGISN 809
++ ++DN++C+L+PG S+
Sbjct: 4 YKSHSDNYICSLIPGTSS 57
>gb|DT508178.1|DT508178 WS02420.BR_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_E10 5', mRNA sequence
Length = 725
Score = 188 bits (404), Expect = 9e-047
Identities = 77/162 (47%), Positives = 108/162 (66%)
Frame = -1 / +2
Query: 778 LLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGD 599
L++K+ SN+Q+VT ++FLL Y+ Y+ +CG+ +P L VAKRQVDYILG+
Sbjct: 2 LMYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGE 181
Query: 598 NPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVV 419
NP+RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G + A ++ +
Sbjct: 182 NPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHSANPNPNILTGAI 361
Query: 418 GGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPN 293
G + +D +PD R+ + SEP TYINA ++G LAYF+A N
Sbjct: 362 VGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFAATLN 487
>gb|DT512795.1|DT512795 WS02420.B21_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_E10 3', mRNA sequence
Length = 725
Score = 188 bits (404), Expect = 9e-047
Identities = 77/162 (47%), Positives = 108/162 (66%)
Frame = -1 / -2
Query: 778 LLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGD 599
L++K+ SN+Q+VT ++FLL Y+ Y+ +CG+ +P L VAKRQVDYILG+
Sbjct: 724 LMYKLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGE 545
Query: 598 NPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVV 419
NP+RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G + A ++ +
Sbjct: 544 NPIRMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHSANPNPNILTGAI 365
Query: 418 GGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPN 293
G + +D +PD R+ + SEP TYINA ++G LAYF+A N
Sbjct: 364 VGGPNQNDGYPDERSDYSHSEPATYINAAMVGPLAYFAATLN 239
>gb|CN523596.1|CN523596 GQ015M07.T3_C08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_C08 5', mRNA sequence
Length = 582
Score = 127 bits (271), Expect(2) = 1e-045
Identities = 50/65 (76%), Positives = 54/65 (83%)
Frame = -1 / +1
Query: 604 GDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGA 425
GDNPL MSYMVGYG R+P RIHHR SSLPSV AHPARI CK G+ Y+ SP PNPN+ VGA
Sbjct: 1 GDNPLGMSYMVGYGPRYPLRIHHRGSSLPSVQAHPARIRCKEGSRYFLSPNPNPNVHVGA 180
Query: 424 VVGGP 410
VVGGP
Sbjct: 181 VVGGP 195
Score = 77.1 bits (162), Expect(2) = 1e-045
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1 / +1
Query: 421 VGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHP 296
V G + +DAFPD+R FQ+SEPTTYINAPL+GLLAYFSAHP
Sbjct: 181 VVGGPNITDAFPDSRPFFQESEPTTYINAPLVGLLAYFSAHP 306
Score = 71.6 bits (150), Expect(3) = 6e-021
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +3 / -2
Query: 492 IRAGCAATDGSELARWWIRRGNRAPYPTMYDIRSGLS 602
+RAGCA TDGSEL WWI G R PYPTMYDI SGLS
Sbjct: 113 MRAGCACTDGSELPLWWILSG*RGPYPTMYDIPSGLS 3
Score = 42.8 bits (87), Expect(3) = 6e-021
Identities = 25/49 (51%), Positives = 25/49 (51%)
Frame = +3 / -2
Query: 276 PPDSAGLGCAEK*ARRPMSGALMYVVGSDCWNTARASGKASESSVGPPT 422
P S G AEK A RP GALM VVGSD SGKAS P T
Sbjct: 326 PFHSGNQGWAEKYASRPTKGALM*VVGSDS*KNGLESGKASVMLGPPTT 180
Score = 24.4 bits (47), Expect(3) = 6e-021
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 408 VGPPTTAPT 434
+GPPTTAPT
Sbjct: 197 LGPPTTAPT 171
>gb|DV466210.1|DV466210 MTUNUL1.P48.G03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 743
Score = 132 bits (282), Expect(3) = 5e-045
Identities = 52/106 (49%), Positives = 71/106 (66%)
Frame = -1 / +3
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
+Q +PGGL+++ +NMQ VT SFL YS+YL+ AG ++C + + +P QL AK Q
Sbjct: 426 VQKTPGGLIYRQRWNNMQFVTGASFLAAVYSDYLASAGRNLNCAAGNVAPSQLLTFAKSQ 605
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCK 482
VDYILGDNP SYMVGYG +PR++HHR SS+ S P + C+
Sbjct: 606 VDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSYKVDPTFVSCR 743
Score = 54.7 bits (113), Expect(3) = 5e-045
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -2 / +3
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAA 1099
SIVFR ++P Y+ LL A +F+FADKYRG Y SS+ A
Sbjct: 3 SIVFRHSNPTYANELLTHAHQLFDFADKYRGKYDSSISVA 122
Score = 38.6 bits (78), Expect(3) = 5e-045
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 970 GASDAINEFGWDNKHAGINVLISKEVLMGK 881
G + EFGWD K+AG+ L++K ++ GK
Sbjct: 249 GTGWGMTEFGWDVKYAGVQTLVAKFLMQGK 338
>gb|BU837593.1|BU837593 T103E10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 574
Score = 120 bits (256), Expect(3) = 1e-044
Identities = 47/91 (51%), Positives = 65/91 (71%)
Frame = -1 / +2
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ SN+Q+VT ++FLL Y+ Y+ G +CG+ +P L
Sbjct: 185 SPYKTTQYTQGGLMYKLPESNLQYVTSITFLLTTYAKYMKATGHTFNCGNLLVTPNSLLY 364
Query: 634 VAKRQVDYILGDNPLRMSYMVGYGARFPRRI 542
VAKRQVDYILG+NP+RMSYMVG+G FP+RI
Sbjct: 365 VAKRQVDYILGENPIRMSYMVGFGPNFPKRI 457
Score = 67.5 bits (141), Expect(3) = 1e-044
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
LGA D + F WDNK+AG++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 29 LGADDQPDLFSWDNKYAGVHVLLSRRALLNNDKNFEQFEGEAESFMCRILP 181
Score = 31.8 bits (63), Expect(3) = 1e-044
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1 / +1
Query: 562 ARFPRRIHHRASSLPSVAAHP 500
A+F +HR SSLPS+A+HP
Sbjct: 436 AKFS*ENYHRGSSLPSLASHP 498
>gb|CX655043.1|CX655043 PO01004B06 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO01004B06 5', mRNA sequence
Length = 675
Score = 79.9 bits (168), Expect(3) = 2e-044
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -2 / +2
Query: 1218 SIVFRDADPAYSKRLLDRAVAVFEFADKYRGPYSSSLHAAVCPCYCDYSGYQDELL 1051
S+VFR D YS LL A VF+FA +Y+G YS SL +AVCP YC YSGY+DELL
Sbjct: 80 SMVFRKVDRKYSALLLRTARKVFQFAMQYQGAYSDSLGSAVCPFYCSYSGYKDELL 247
Score = 71.6 bits (150), Expect(3) = 2e-044
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = -1 / +2
Query: 814 SNHPQIQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRR 635
S + QY+ GGL++K+ +N+Q+VT ++FLL Y+ Y+ +CG+ +P L
Sbjct: 467 SPYKTTQYTQGGLMYKLPENNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLY 646
Query: 634 VAKRQVDYI 608
VAKRQVDYI
Sbjct: 647 VAKRQVDYI 673
Score = 67.5 bits (141), Expect(3) = 2e-044
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 973 LGASDAINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCTLLP 821
LGA D + F WDNK+AG++VL+S+ L+ D+ F+ F A++FMC +LP
Sbjct: 311 LGADDQPDLFSWDNKYAGVHVLLSRRALLNNDKNFEQFEGEAESFMCRILP 463
>gb|CN518303.1|CN518303 GQ0091.B3_F12 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0091_F12 5', mRNA sequence
Length = 506
Score = 178 bits (383), Expect = 7e-044
Identities = 73/152 (48%), Positives = 100/152 (65%)
Frame = -1 / +1
Query: 757 SNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPLRMSY 578
SN+Q+VT ++FLL Y+ Y+ +CG+ +P L VAKRQVDYILG+NP+RMSY
Sbjct: 1 SNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGENPIRMSY 180
Query: 577 MVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGPTDDS 398
MVG+G FP+RIHHR SSLPS+A+HP IGC +G + A ++ + G + +
Sbjct: 181 MVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHSANPNPNILTGAIVGGPNQN 360
Query: 397 DAFPDARAVFQQSEPTTYINAPLMGLLAYFSA 302
D +PD R+ + SEP TYINA + LAYF+A
Sbjct: 361 DGYPDERSDYSHSEPATYINAAMXXXLAYFAA 456
>gb|CV227953.1|CV227953 WS0168.B21_K23 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_K23
3', mRNA sequence
Length = 714
Score = 178 bits (383), Expect = 7e-044
Identities = 74/159 (46%), Positives = 103/159 (64%)
Frame = -1 / -3
Query: 769 KVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQVDYILGDNPL 590
K+ SN+Q+VT ++FLL Y+ Y+ +CG+ +P L VAKRQVDYILG+NP+
Sbjct: 712 KLPESNLQYVTSITFLLTTYAKYMKATRHTFNCGNLLVTPNSLLYVAKRQVDYILGENPI 533
Query: 589 RMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPNLLVGAVVGGP 410
RMSYMVG+G FP+RIHHR SSLPS+A+HP IGC +G + A ++ + G
Sbjct: 532 RMSYMVGFGPNFPKRIHHRGSSLPSLASHPQAIGCDSGFEPFFHSANPNPNILTGAIVGG 353
Query: 409 TDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPN 293
+ +D +PD R+ + SEP TYINA ++ LAYF+ N
Sbjct: 352 PNQNDGYPDERSDYSHSEPATYINAAMVEPLAYFAGTLN 236
>gb|DV464578.1|DV464578 MTUNUL1.P29.C07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 764
Score = 176 bits (379), Expect = 2e-043
Identities = 76/165 (46%), Positives = 103/165 (62%)
Frame = -1 / +3
Query: 799 IQYSPGGLLFKVGSSNMQHVTQLSFLLLAYSNYLSHAGGRVSCGSSSASPVQLRRVAKRQ 620
+Q +PGGL+++ +NMQ VT SFL YS+YL+ AG ++C + + +P QL AK Q
Sbjct: 15 VQKTPGGLIYRQRWNNMQFVTGASFLAAVYSDYLASAGRNLNCAAGNVAPSQLLTFAKSQ 194
Query: 619 VDYILGDNPLRMSYMVGYGARFPRRIHHRASSLPSVAAHPARIGCKAGAAYYTSPAPNPN 440
VDYILGDNP SYMVGYG +PR++HHR SS+ S P + C+ G A + S +
Sbjct: 195 VDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSYKVDPTFVSCRGGYATWFSRKGSDP 374
Query: 439 LLVGAVVGGPTDDSDAFPDARAVFQQSEPTTYINAPLMGLLAYFS 305
L+ + G D D F D R ++Q+EP TY NAPL+GLLA S
Sbjct: 375 NLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGLLARLS 509
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 407,701,155
Number of Sequences: 369679
Number of extensions: 5315224
Number of successful extensions: 34298
Number of sequences better than 1.0e-020: 117
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 17018095053
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)