TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576887.2.1
(1138 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DV465062.1|DV465062 MTUNUL1.P34.E04 NUL Populus fremonti... 244 1e-083
gb|DT495581.1|DT495581 WS01120.BR_O10 PT-P-FL-A-2 Populus t... 244 1e-083
gb|DT508796.1|DT508796 WS02421.BR_P10 PTxD-ICC-N-A-14 Popul... 244 1e-083
gb|DV464532.1|DV464532 MTUNUL1.P28.G03 NUL Populus fremonti... 244 1e-083
gb|DV466605.1|DV466605 MTUNUL1.P7.H01 NUL Populus fremontii... 244 5e-083
gb|CV277724.1|CV277724 WS0144.B21_G04 PTxD-IL-A-5 Populus t... 244 7e-083
gb|DT504214.1|DT504214 WS01312.B21_H13 PTxD-IL-FL-A-4 Popul... 244 7e-083
gb|DT501354.1|DT501354 WS01312.BR_H13 PTxD-IL-FL-A-4 Populu... 244 5e-082
gb|CN519292.1|CN519292 GQ0104.B3_O08 GQ010 Populus trichoca... 245 6e-081
gb|CF230139.1|CF230139 PtaC0004C6C0606 Poplar cDNA library ... 238 6e-079
gb|DT513405.1|DT513405 WS02421.B21_P10 PTxD-ICC-N-A-14 Popu... 244 7e-076
gb|DV464427.1|DV464427 MTUNUL1.P27.D04 NUL Populus fremonti... 227 2e-075
gb|DT500664.1|DT500664 PX0019.BR.1_H06 PT-X-FL-A-1 Populus ... 226 2e-075
gb|CF233415.1|CF233415 PtaJXO0023A5A0501 Poplar cDNA librar... 205 5e-070
gb|CF232950.1|CF232950 PtaJXO0017F4F0412 Poplar cDNA librar... 192 9e-070
gb|BU825514.1|BU825514 UK109TF10 Populus apical shoot cDNA ... 188 1e-063
gb|AJ777201.1|AJ777201 AJ777201 Populus euphratica root 3-6... 181 9e-062
gb|CA826107.1|CA826107 R72F05 two-month-old roots from clon... 191 7e-061
gb|CX655823.1|CX655823 PO02040F02 Poplar SC cDNA library Po... 223 4e-060
gb|CV252907.1|CV252907 PX0019.B21.1_H06 PT-X-FL-A-1 Populus... 220 5e-059
gb|BU820598.1|BU820598 UB11CPH09 Populus tremula cambium cD... 144 1e-050
gb|CK106189.1|CK106189 UB11CPH09.5pR Populus active cambium... 86 6e-049
gb|CA934198.1|CA934198 MTU3TS.P4.D11 Aspen stem cDNA Librar... 150 3e-041
gb|CA933881.1|CA933881 MTU3TS.P13.H01 Aspen stem cDNA Libra... 154 6e-039
gb|DT521015.1|DT521015 WS02033.B21_C20 PTxN-IB-N-A-11 Popul... 142 7e-036
gb|BI138831.1|BI138831 F116P94Y Populus flower cDNA library... 77 4e-027
gb|CV270398.1|CV270398 WS0151.B21_O06 PTxN-IB-A-6 Populus t... 100 2e-023
gb|DN485375.1|DN485375 M129F02.3pR Populus female catkins c... 58 1e-022
gb|BU869396.1|BU869396 M129F02 Populus flower cDNA library ... 58 1e-022
gb|DN494843.1|DN494843 M129F02.5pR Populus female catkins c... 58 1e-022
gb|BU881802.1|BU881802 UM67TF11 Populus flower cDNA library... 56 5e-022
gb|CN193388.1|CN193388 PtdH9 hybrid poplar systemically wou... 74 5e-022
>gb|DV465062.1|DV465062 MTUNUL1.P34.E04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 977
Score = 244 bits (527), Expect(3) = 1e-083
Identities = 88/168 (52%), Positives = 115/168 (68%)
Frame = +1 / +3
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 222 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 401
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 402 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 581
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 582 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 725
Score = 88.6 bits (187), Expect(3) = 3e-034
Identities = 50/99 (50%), Positives = 53/99 (53%)
Frame = -3 / -2
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 727 ITQSRGLKSL*KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 548
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
VTLYL+* R K SS*TTG EQVPCFSHS AQK P
Sbjct: 547 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDP 431
Score = 76.7 bits (161), Expect(3) = 1e-083
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +3
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 150 QREFDYFALSLQWPGTYCRHTRHCCSQNACCR 245
Score = 48.3 bits (99), Expect(3) = 3e-034
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / -2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 265 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 149
Score = 47.3 bits (97), Expect(3) = 3e-034
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -2
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 400 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 266
Score = 29.0 bits (57), Expect(3) = 1e-083
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / +3
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 726 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 824
>gb|DT495581.1|DT495581 WS01120.BR_O10 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_O10 5', mRNA sequence
Length = 924
Score = 244 bits (527), Expect(3) = 1e-083
Identities = 88/168 (52%), Positives = 115/168 (68%)
Frame = +1 / +1
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 202 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 381
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 382 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYYKYNVTKVLNEAGYVPS 561
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 562 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 705
Score = 86.3 bits (182), Expect(3) = 1e-033
Identities = 50/99 (50%), Positives = 52/99 (52%)
Frame = -3 / -2
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 707 ITQSRGLKSL*KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 528
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
VTLYL * R K SS*TTG EQVPCFSHS AQK P
Sbjct: 527 VTLYL**TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDP 411
Score = 76.7 bits (161), Expect(3) = 1e-083
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +1
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 130 QREFDYFALSLQWPGTYCRHTRHCCSQNACCR 225
Score = 48.3 bits (99), Expect(3) = 1e-033
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / -2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 245 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 129
Score = 47.3 bits (97), Expect(3) = 1e-033
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -2
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 380 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 246
Score = 29.0 bits (57), Expect(3) = 1e-083
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / +1
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 706 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 804
>gb|DT508796.1|DT508796 WS02421.BR_P10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02421_P10 5', mRNA sequence
Length = 897
Score = 244 bits (527), Expect(3) = 1e-083
Identities = 88/168 (52%), Positives = 115/168 (68%)
Frame = +1 / +2
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 188 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 367
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 368 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 547
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 548 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 691
Score = 88.6 bits (187), Expect(3) = 3e-034
Identities = 50/99 (50%), Positives = 53/99 (53%)
Frame = -3 / -1
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 693 ITQSRGLKSL*KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 514
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
VTLYL+* R K SS*TTG EQVPCFSHS AQK P
Sbjct: 513 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDP 397
Score = 76.7 bits (161), Expect(3) = 1e-083
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +2
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 116 QREFDYFALSLQWPGTYCRHTRHCCSQNACCR 211
Score = 48.3 bits (99), Expect(3) = 3e-034
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / -1
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 231 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 115
Score = 47.3 bits (97), Expect(3) = 3e-034
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -1
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 366 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 232
Score = 29.0 bits (57), Expect(3) = 1e-083
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / +2
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 692 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 790
>gb|DV464532.1|DV464532 MTUNUL1.P28.G03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 809
Score = 244 bits (527), Expect(3) = 1e-083
Identities = 88/168 (52%), Positives = 115/168 (68%)
Frame = +1 / +1
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 196 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 375
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 376 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 555
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 556 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 699
Score = 88.6 bits (187), Expect(3) = 3e-034
Identities = 50/99 (50%), Positives = 53/99 (53%)
Frame = -3 / -1
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 701 ITQSRGLKSL*KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 522
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
VTLYL+* R K SS*TTG EQVPCFSHS AQK P
Sbjct: 521 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDP 405
Score = 76.7 bits (161), Expect(3) = 1e-083
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +1
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 124 QREFDYFALSLQWPGTYCRHTRHCCSQNACCR 219
Score = 48.3 bits (99), Expect(3) = 3e-034
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / -1
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 239 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 123
Score = 47.3 bits (97), Expect(3) = 3e-034
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -1
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 374 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 240
Score = 29.0 bits (57), Expect(3) = 1e-083
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / +1
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 700 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 798
>gb|DV466605.1|DV466605 MTUNUL1.P7.H01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 905
Score = 244 bits (527), Expect(3) = 5e-083
Identities = 88/168 (52%), Positives = 115/168 (68%)
Frame = +1 / +3
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 225 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 404
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 405 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 584
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 585 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 728
Score = 88.6 bits (187), Expect(3) = 3e-034
Identities = 50/99 (50%), Positives = 53/99 (53%)
Frame = -3 / -2
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 730 ITQSRGLKSL*KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 551
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
VTLYL+* R K SS*TTG EQVPCFSHS AQK P
Sbjct: 550 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDP 434
Score = 76.7 bits (161), Expect(3) = 5e-083
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +3
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 153 QREFDYFALSLQWPGTYCRHTRHCCSQNACCR 248
Score = 48.3 bits (99), Expect(3) = 3e-034
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / -2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 268 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 152
Score = 47.3 bits (97), Expect(3) = 3e-034
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -2
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 403 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 269
Score = 27.2 bits (53), Expect(3) = 5e-083
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1 / +3
Query: 766 CPRYITLPTYDPLVLANSTVEI 831
CP+Y++LP Y L L + E+
Sbjct: 762 CPKYVSLPAYVSLGLDGAGTEV 827
>gb|CV277724.1|CV277724 WS0144.B21_G04 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0144_G04 3', mRNA sequence
Length = 910
Score = 244 bits (527), Expect(3) = 7e-083
Identities = 88/168 (52%), Positives = 115/168 (68%)
Frame = +1 / -3
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 806 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 627
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 626 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 447
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 446 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 303
Score = 88.6 bits (187), Expect(3) = 3e-034
Identities = 50/99 (50%), Positives = 53/99 (53%)
Frame = -3 / +1
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 301 ITQSRGLKSL*KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 480
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
VTLYL+* R K SS*TTG EQVPCFSHS AQK P
Sbjct: 481 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDP 597
Score = 74.4 bits (156), Expect(3) = 7e-083
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +1 / -3
Query: 154 REFDYFALSLQWPGTICASTRHCCATNGCCR 246
REFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 875 REFDYFALSLQWPGTYCRHTRHCCSQNACCR 783
Score = 48.3 bits (99), Expect(3) = 3e-034
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / +1
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 763 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 879
Score = 47.3 bits (97), Expect(3) = 3e-034
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / +1
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 628 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 762
Score = 29.0 bits (57), Expect(3) = 7e-083
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / -3
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 302 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 204
>gb|DT504214.1|DT504214 WS01312.B21_H13 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_H13 3', mRNA sequence
Length = 869
Score = 244 bits (527), Expect(3) = 7e-083
Identities = 88/168 (52%), Positives = 115/168 (68%)
Frame = +1 / -3
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 792 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 613
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 612 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 433
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 432 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 289
Score = 88.6 bits (187), Expect(3) = 3e-034
Identities = 50/99 (50%), Positives = 53/99 (53%)
Frame = -3 / +2
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 287 ITQSRGLKSL*KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 466
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
VTLYL+* R K SS*TTG EQVPCFSHS AQK P
Sbjct: 467 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDP 583
Score = 74.4 bits (156), Expect(3) = 7e-083
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +1 / -3
Query: 154 REFDYFALSLQWPGTICASTRHCCATNGCCR 246
REFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 861 REFDYFALSLQWPGTYCRHTRHCCSQNACCR 769
Score = 48.3 bits (99), Expect(3) = 3e-034
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / +2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 749 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 865
Score = 47.3 bits (97), Expect(3) = 3e-034
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / +2
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 614 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 748
Score = 29.0 bits (57), Expect(3) = 7e-083
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / -3
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 288 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 190
>gb|DT501354.1|DT501354 WS01312.BR_H13 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_H13 5', mRNA sequence
Length = 781
Score = 244 bits (527), Expect(3) = 5e-082
Identities = 88/168 (52%), Positives = 115/168 (68%)
Frame = +1 / +2
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 209 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 388
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 389 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 568
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 569 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 712
Score = 88.6 bits (187), Expect(3) = 3e-034
Identities = 50/99 (50%), Positives = 53/99 (53%)
Frame = -3 / -2
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 714 ITQSRGLKSL*KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 535
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
VTLYL+* R K SS*TTG EQVPCFSHS AQK P
Sbjct: 534 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDP 418
Score = 74.4 bits (156), Expect(3) = 5e-082
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +1 / +2
Query: 154 REFDYFALSLQWPGTICASTRHCCATNGCCR 246
REFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 140 REFDYFALSLQWPGTYCRHTRHCCSQNACCR 232
Score = 48.3 bits (99), Expect(3) = 3e-034
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / -2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 252 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 136
Score = 47.3 bits (97), Expect(3) = 3e-034
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -2
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 387 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 253
Score = 26.3 bits (51), Expect(3) = 5e-082
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +1 / +2
Query: 733 LANGSVSKSKHCPRYITLPTY 795
+ N + CP+Y++LP Y
Sbjct: 713 IQNDMYTSKSSCPKYVSLPAY 775
>gb|CN519292.1|CN519292 GQ0104.B3_O08 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_O08 5', mRNA sequence
Length = 777
Score = 245 bits (530), Expect(2) = 6e-081
Identities = 88/168 (52%), Positives = 116/168 (69%)
Frame = +1 / +1
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 178 CSKNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 357
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
S +C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 358 GSSSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 537
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELR+CF K+ KPRDC+
Sbjct: 538 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRICFYKDFKPRDCV 681
Score = 127 bits (271), Expect(2) = 1e-037
Identities = 75/154 (48%), Positives = 79/154 (51%)
Frame = -3 / -2
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 683 ITQSRGLKSL*KHIRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 504
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSPLPLKHVPDLEQ*RDGQYLSST 366
VTLYL+* R K SS*TTG EQVPCFSHS AQK P D Q RDGQY S
Sbjct: 503 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDPFVPWQDDDEPQLRDGQYFSRA 324
Query: 365 SFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
S + I R QH G VPS *SG PWIVN
Sbjct: 323 SCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 222
Score = 76.7 bits (161), Expect(2) = 6e-081
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +1
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 106 QREFDYFALSLQWPGTYCRHTRHCCSKNACCR 201
Score = 50.1 bits (103), Expect(2) = 1e-037
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -3 / -2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ + QQWRV Q VPGH R+ AK*SNS C
Sbjct: 221 SVGAFAPRQQAFLEQQWRVWRQ*VPGHCRDKAK*SNSLC 105
>gb|CF230139.1|CF230139 PtaC0004C6C0606 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 750
Score = 238 bits (515), Expect(2) = 6e-079
Identities = 86/168 (51%), Positives = 114/168 (67%)
Frame = +1 / +3
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC ++ F +I L + L+KYWPSL C
Sbjct: 213 CSKNACCRGANAPTEFTIHGLWPDYNDGTWPACCTQSDFNEKEISTLHDALEKYWPSLSC 392
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 393 GSPSSCRGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 572
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G + ELRLCF K+ KPRDC+
Sbjct: 573 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLXELRLCFYKDFKPRDCV 716
Score = 95.0 bits (201), Expect(3) = 2e-033
Identities = 57/121 (47%), Positives = 61/121 (50%)
Frame = -3 / -3
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT G KA + Y FE P S
Sbjct: 718 ITQSRGLKSL*KHKRSSSKSPFEQTSXGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 539
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSPLPLKHVPDLEQ*RDGQYLSST 366
VTLYL+* R K SS*TTG EQVPCFSHS AQK P + Q RDGQY S
Sbjct: 538 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDPFVPRQDDGEPQLRDGQYFSRA 359
Query: 365 S 363
S
Sbjct: 358 S 356
Score = 76.7 bits (161), Expect(2) = 6e-079
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +3
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 141 QREFDYFALSLQWPGTYCRHTRHCCSKNACCR 236
Score = 50.1 bits (103), Expect(3) = 2e-033
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -3 / -3
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ + QQWRV Q VPGH R+ AK*SNS C
Sbjct: 256 SVGAFAPRQQAFLEQQWRVWRQ*VPGHCRDKAK*SNSLC 140
Score = 35.9 bits (72), Expect(3) = 2e-033
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -3 / -3
Query: 320 QHDGQVPSS*SGHSPWIVN 264
QH G VPS *SG PWIVN
Sbjct: 313 QHAGHVPSL*SGQRPWIVN 257
>gb|DT513405.1|DT513405 WS02421.B21_P10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02421_P10 3', mRNA sequence
Length = 850
Score = 244 bits (527), Expect(3) = 7e-076
Identities = 88/168 (52%), Positives = 115/168 (68%)
Frame = +1 / -2
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 810 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 631
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 630 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 451
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 450 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 307
Score = 88.6 bits (187), Expect(3) = 2e-029
Identities = 50/99 (50%), Positives = 53/99 (53%)
Frame = -3 / +2
Query: 725 VRQSRGFNSLSKHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSIS 546
+ QSRG SL KH SSS P QT CG KA + Y FE P S
Sbjct: 305 ITQSRGLKSL*KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTF 484
Query: 545 VTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
VTLYL+* R K SS*TTG EQVPCFSHS AQK P
Sbjct: 485 VTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDP 601
Score = 51.0 bits (105), Expect(3) = 7e-076
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1 / -2
Query: 184 QWPGTICASTRHCCATNGCCR 246
QWPGT C TRHCC+ N CCR
Sbjct: 849 QWPGTYCRHTRHCCSQNACCR 787
Score = 47.3 bits (97), Expect(3) = 2e-029
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / +2
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 632 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 766
Score = 31.8 bits (63), Expect(3) = 2e-029
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3 / +2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGH 186
+V + + RQQ QQWRV Q VPGH
Sbjct: 767 SVGAFAPRQQAFWEQQWRVWRQ*VPGH 847
Score = 29.0 bits (57), Expect(3) = 7e-076
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / -2
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 306 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 208
>gb|DV464427.1|DV464427 MTUNUL1.P27.D04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 698
Score = 227 bits (490), Expect(2) = 2e-075
Identities = 82/158 (51%), Positives = 107/158 (67%)
Frame = +1 / +1
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 223 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 402
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 403 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 582
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCF 693
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF
Sbjct: 583 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCF 696
Score = 76.7 bits (161), Expect(2) = 2e-075
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +1
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 151 QREFDYFALSLQWPGTYCRHTRHCCSQNACCR 246
Score = 76.7 bits (161), Expect(3) = 9e-031
Identities = 44/88 (50%), Positives = 46/88 (52%)
Frame = -3 / -1
Query: 692 KHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSISVTLYLE*RSRA 513
KH SSS P QT CG KA + Y FE P S VTLYL+* R
Sbjct: 695 KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTFVTLYLK*TLRV 516
Query: 512 RVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
K SS*TTG EQVPCFSHS AQK P
Sbjct: 515 VEK*LYSS*TTGEEQVPCFSHSCAQKDP 432
Score = 48.3 bits (99), Expect(3) = 9e-031
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / -1
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 266 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 150
Score = 47.3 bits (97), Expect(3) = 9e-031
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -1
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 401 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 267
>gb|DT500664.1|DT500664 PX0019.BR.1_H06 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_H06 5', mRNA sequence
Length = 684
Score = 226 bits (489), Expect(2) = 2e-075
Identities = 82/158 (51%), Positives = 107/158 (67%)
Frame = +1 / +2
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 209 CSQNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNGKEISTLHDALEKYWPSLSC 388
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 389 GSPSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 568
Query: 580 NGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCF 693
N ++Y L ++ I++AF +PQ+VC +G +EELRLCF
Sbjct: 569 NSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCF 682
Score = 76.7 bits (161), Expect(2) = 2e-075
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +2
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 137 QREFDYFALSLQWPGTYCRHTRHCCSQNACCR 232
Score = 76.7 bits (161), Expect(3) = 1e-030
Identities = 44/88 (50%), Positives = 46/88 (52%)
Frame = -3 / -1
Query: 692 KHNLSSSIEPLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSISVTLYLE*RSRA 513
KH SSS P QT CG KA + Y FE P S VTLYL+* R
Sbjct: 681 KHKRSSSKSPFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTFVTLYLK*TLRV 502
Query: 512 RVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
K SS*TTG EQVPCFSHS AQK P
Sbjct: 501 VEK*LYSS*TTGEEQVPCFSHSCAQKDP 418
Score = 48.3 bits (99), Expect(3) = 1e-030
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -3 / -1
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ QQWRV Q VPGH R+ AK*SNS C
Sbjct: 252 SVGAFAPRQQAFWEQQWRVWRQ*VPGHCRDKAK*SNSLC 136
Score = 46.9 bits (96), Expect(3) = 1e-030
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -1
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 387 QLRDGQYFSRASCNVEISFPLKSDRVQHAGHVPSL*SGQRPWIVN 253
>gb|CF233415.1|CF233415 PtaJXO0023A5A0501 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 706
Score = 205 bits (443), Expect(3) = 5e-070
Identities = 72/134 (53%), Positives = 96/134 (71%)
Frame = +1 / +3
Query: 265 FTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYCSKSGTCFSGKGLFWA 444
FTIHGLWPDY+DGTWP+CC ++ F +I L + L+KYWPSL C +C KG FWA
Sbjct: 249 FTIHGLWPDYNDGTWPACCTQSDFNEKEISTLHDALEKYWPSLSCGSPSSCRGTKGSFWA 428
Query: 445 HEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVSNGKEYALSDVIDTIK 624
HEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G SN ++Y L ++ I+
Sbjct: 429 HEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVSAIE 608
Query: 625 HAFGGSPQIVCKRG 666
+AF +PQ+VC +G
Sbjct: 609 NAFHATPQLVCSKG 650
Score = 79.0 bits (166), Expect(3) = 6e-028
Identities = 47/101 (46%), Positives = 50/101 (49%)
Frame = -3 / -1
Query: 665 PLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSISVTLYLE*RSRARVKYCNSS* 486
P QT CG KA + Y FE P S VTLYL+* R K SS*
Sbjct: 649 PFEQTSCGVAWKAFSIADTMPPRGYFSLFEGTYPASFSTFVTLYLK*TLRVVEK*LYSS* 470
Query: 485 TTGAEQVPCFSHS*AQKSPLPLKHVPDLEQ*RDGQYLSSTS 363
TTG EQVPCFSHS AQK P + Q RDGQY S S
Sbjct: 469 TTGEEQVPCFSHSCAQKDPFVPRQDDGEPQLRDGQYFSRAS 347
Score = 71.6 bits (150), Expect(3) = 5e-070
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +1 / +3
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHC + N CCR
Sbjct: 132 QREFDYFALSLQWPGTYCRHTRHCXSKNACCR 227
Score = 47.8 bits (98), Expect(3) = 6e-028
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = -3 / -1
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ + QWRV Q VPGH R+ AK*SNS C
Sbjct: 247 SVGAFAPRQQAFLXXQWRVWRQ*VPGHCRDKAK*SNSLC 131
Score = 35.9 bits (72), Expect(3) = 6e-028
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 320 QHDGQVPSS*SGHSPWIVN 264
QH G VPS *SG PWIVN
Sbjct: 304 QHAGHVPSL*SGQRPWIVN 248
Score = 27.2 bits (53), Expect(3) = 5e-070
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / +2
Query: 658 KRGSIEELRLCFDKELKPR 714
K G + LRLCF K+ KPR
Sbjct: 644 KGGIWKXLRLCFYKDFKPR 700
>gb|CF232950.1|CF232950 PtaJXO0017F4F0412 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 692
Score = 192 bits (414), Expect(3) = 9e-070
Identities = 70/142 (49%), Positives = 92/142 (64%)
Frame = +1 / +3
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC ++ F +I L + L+KYWPSL C
Sbjct: 213 CSKNACCRGANAPTEFTIHGLWPDYNDGTWPACCTQSDFNEKEISTLHDALEKYWPSLSC 392
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 393 GSPSSCRGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 572
Query: 580 NGKEYALSDVIDTIKHAFGGSP 645
N ++Y L ++ I +AF +P
Sbjct: 573 NSEKYPLGGIVSAIXNAFHATP 638
Score = 76.7 bits (161), Expect(3) = 9e-070
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +3
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 141 QREFDYFALSLQWPGTYCRHTRHCCSKNACCR 236
Score = 74.8 bits (157), Expect(4) = 1e-029
Identities = 45/101 (44%), Positives = 50/101 (49%)
Frame = -3 / -2
Query: 665 PLLQTICGDPPKACLMVSMTSLSAYSLPFETCIPPLDSISVTLYLE*RSRARVKYCNSS* 486
PL + + G KA + Y FE P S VTLYL+* R K SS*
Sbjct: 658 PLSKPVAGVAWKAXSIADTMPPRGYFSLFEGTYPASFSTFVTLYLK*TLRVVEK*LYSS* 479
Query: 485 TTGAEQVPCFSHS*AQKSPLPLKHVPDLEQ*RDGQYLSSTS 363
TTG EQVPCFSHS AQK P + Q RDGQY S S
Sbjct: 478 TTGEEQVPCFSHSCAQKDPFVPRQDDGEPQLRDGQYFSRAS 356
Score = 50.1 bits (103), Expect(4) = 1e-029
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -3 / -2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ + QQWRV Q VPGH R+ AK*SNS C
Sbjct: 256 SVGAFAPRQQAFLEQQWRVWRQ*VPGHCRDKAK*SNSLC 140
Score = 35.9 bits (72), Expect(4) = 1e-029
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -3 / -2
Query: 320 QHDGQVPSS*SGHSPWIVN 264
QH G VPS *SG PWIVN
Sbjct: 313 QHAGHVPSL*SGQRPWIVN 257
Score = 34.5 bits (69), Expect(3) = 9e-070
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 643 PQIVCKRGSIEELRLCF 693
PQ+VC +G +EEL LCF
Sbjct: 637 PQLVCSKGDLEELXLCF 687
Score = 24.9 bits (48), Expect(4) = 1e-029
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3 / -1
Query: 692 KHNLSSSIEPLLQTICG 642
KH SSS P QT CG
Sbjct: 686 KHKXSSSKSPFEQTSCG 636
>gb|BU825514.1|BU825514 UK109TF10 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 627
Score = 188 bits (404), Expect(2) = 1e-063
Identities = 68/137 (49%), Positives = 90/137 (65%)
Frame = +1 / +1
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC ++ F +I L + L+KYWPSL C
Sbjct: 217 CSKNACCRGANAPTEFTIHGLWPDYNDGTWPACCTQSDFNEKEISTLHDALEKYWPSLSC 396
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 397 GSPSSCRGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 576
Query: 580 NGKEYALSDVIDTIKHA 630
N ++Y L ++ I++A
Sbjct: 577 NSEKYPLGGIVSAIENA 627
Score = 76.7 bits (161), Expect(2) = 1e-063
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +1
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 145 QREFDYFALSLQWPGTYCRHTRHCCSKNACCR 240
Score = 70.7 bits (148), Expect(3) = 3e-026
Identities = 39/73 (53%), Positives = 41/73 (56%)
Frame = -3 / -2
Query: 581 FETCIPPLDSISVTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSPLPLKHVPDL 402
FE P S VTLYL+* R K SS*TTG EQVPCFSHS AQK P +
Sbjct: 578 FEGTYPASFSTFVTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDPFVPRQDDGE 399
Query: 401 EQ*RDGQYLSSTS 363
Q RDGQY S S
Sbjct: 398 PQLRDGQYFSRAS 360
Score = 50.1 bits (103), Expect(3) = 3e-026
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -3 / -2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ + QQWRV Q VPGH R+ AK*SNS C
Sbjct: 260 SVGAFAPRQQAFLEQQWRVWRQ*VPGHCRDKAK*SNSLC 144
Score = 35.9 bits (72), Expect(3) = 3e-026
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -3 / -2
Query: 320 QHDGQVPSS*SGHSPWIVN 264
QH G VPS *SG PWIVN
Sbjct: 317 QHAGHVPSL*SGQRPWIVN 261
>gb|AJ777201.1|AJ777201 AJ777201 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400024F11F1, mRNA sequence
Length = 582
Score = 181 bits (390), Expect(2) = 9e-062
Identities = 66/135 (48%), Positives = 85/135 (62%)
Frame = +1 / +1
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 178 CSKNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 357
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
+C KG FW HEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 358 GSPSSCHGSKGSFWGHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 537
Query: 580 NGKEYALSDVIDTIK 624
++Y L + I+
Sbjct: 538 ESEKYPLGGIGSAIE 582
Score = 76.7 bits (161), Expect(2) = 9e-062
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +1
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 106 QREFDYFALSLQWPGTYCRRTRHCCSKNACCR 201
Score = 54.2 bits (112), Expect(3) = 4e-025
Identities = 29/50 (58%), Positives = 30/50 (60%)
Frame = -3 / -2
Query: 578 ETCIPPLDSISVTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSP 429
E P S VTLYL+* R K SS*TTG EQVPCFSHS QK P
Sbjct: 536 EGTYPASFSTFVTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCPQKDP 387
Score = 51.5 bits (106), Expect(3) = 4e-025
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -3 / -2
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ + QQWRV Q VPGH R+ AK*SNS C
Sbjct: 221 SVGAFAPRQQAFLEQQWRVRRQ*VPGHCRDKAK*SNSLC 105
Score = 47.3 bits (97), Expect(3) = 4e-025
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = -3 / -2
Query: 398 Q*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 356 QLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 222
>gb|CA826107.1|CA826107 R72F05 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 664
Score = 191 bits (411), Expect(3) = 7e-061
Identities = 70/137 (51%), Positives = 90/137 (65%)
Frame = +1 / +3
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC R+ F +I L + L+KYWPSL C
Sbjct: 198 CSKNACCRGANAPTEFTIHGLWPDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSC 377
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVS 579
S +C KG FWAHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G S
Sbjct: 378 GSSSSCHGTKGSFWAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPS 557
Query: 580 NGKEYALSDVIDTIKHA 630
N ++Y L + I++A
Sbjct: 558 NSEKYPLGGXVSAIENA 608
Score = 99.1 bits (210), Expect(2) = 9e-027
Identities = 56/106 (52%), Positives = 58/106 (54%)
Frame = -3 / -1
Query: 581 FETCIPPLDSISVTLYLE*RSRARVKYCNSS*TTGAEQVPCFSHS*AQKSPLPLKHVPDL 402
FE P S VTLYL+* R K SS*TTG EQVPCFSHS AQK P D
Sbjct: 559 FEGTYPASFSTFVTLYLK*TLRVVEK*LYSS*TTGEEQVPCFSHSCAQKDPFVPWQDDDE 380
Query: 401 EQ*RDGQYLSSTSFSGNILSISNWVRRQHDGQVPSS*SGHSPWIVN 264
Q RDGQY S S + I R QH G VPS *SG PWIVN
Sbjct: 379 PQLRDGQYFSRASCNVEISFSLKSDRVQHAGHVPSL*SGQRPWIVN 242
Score = 59.3 bits (123), Expect(3) = 7e-061
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / +2
Query: 151 QREFDYFALSLQWPGTICASTRHC 222
QREFDYFALSLQWPGT C TRHC
Sbjct: 125 QREFDYFALSLQWPGTYCRHTRHC 196
Score = 41.8 bits (85), Expect(2) = 9e-027
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3 / -2
Query: 227 AQQWRVEAQMVPGHWRESAK*SNSRC 150
++QWRV Q VPGH R+ AK*SNS C
Sbjct: 201 SRQWRVWRQ*VPGHCRDKAK*SNSLC 124
Score = 23.5 bits (45), Expect(3) = 7e-061
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 640 SPQIVCKRGSIEELRL 687
+PQ+VC + +EE R+
Sbjct: 616 NPQLVCSKXDLEEPRI 663
>gb|CX655823.1|CX655823 PO02040F02 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02040F02 5', mRNA sequence
Length = 653
Score = 223 bits (482), Expect(2) = 4e-060
Identities = 78/148 (52%), Positives = 105/148 (70%)
Frame = +1 / +1
Query: 280 LWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYCSKSGTCFSGKGLFWAHEWEK 459
LWPDY+DGTWP+CC ++ F +I L + L+KYWPSL C +C KG FW HEWEK
Sbjct: 1 LWPDYNDGTWPACCTQSDFNEKEISTLHDALEKYWPSLSCGSPSSCRGTKGSFWQHEWEK 180
Query: 460 HGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVSNGKEYALSDVIDTIKHAFGG 639
HGTCS+PV DE YF+ L++Y KYNVT++L+ G SN ++Y L ++ I++AF
Sbjct: 181 HGTCSSPVAHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVSAIENAFHA 360
Query: 640 SPQIVCKRGSIEELRLCFDKELKPRDCL 723
+PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 361 TPQLVCSKGDLEELRLCFYKDFKPRDCV 444
Score = 29.0 bits (57), Expect(2) = 4e-060
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / +1
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 445 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 543
>gb|CV252907.1|CV252907 PX0019.B21.1_H06 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_H06 3', mRNA sequence
Length = 732
Score = 220 bits (474), Expect(2) = 5e-059
Identities = 78/145 (53%), Positives = 104/145 (71%)
Frame = +1 / -3
Query: 289 DYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYCSKSGTCFSGKGLFWAHEWEKHGT 468
DY+DGTWP+CC R+ F +I L + L+KYWPSL C +C KG FWAHEWEKHGT
Sbjct: 730 DYNDGTWPACCTRSDFNGKEISTLHDALEKYWPSLSCGSPSSCHGTKGSFWAHEWEKHGT 551
Query: 469 CSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVSNGKEYALSDVIDTIKHAFGGSPQ 648
CS+PVV DE YF+ L++Y KYNVT++L+ G SN ++Y L ++ I++AF +PQ
Sbjct: 550 CSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVSAIENAFHATPQ 371
Query: 649 IVCKRGSIEELRLCFDKELKPRDCL 723
+VC +G +EELRLCF K+ KPRDC+
Sbjct: 370 LVCSKGDLEELRLCFYKDFKPRDCV 296
Score = 29.0 bits (57), Expect(2) = 5e-059
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / -3
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 295 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 197
>gb|BU820598.1|BU820598 UB11CPH09 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 480
Score = 144 bits (309), Expect(2) = 1e-050
Identities = 51/92 (55%), Positives = 61/92 (66%)
Frame = +1 / +2
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC ++ F +I L + L+KYWPSL C
Sbjct: 200 CSKNACCRGANAPTEFTIHGLWPDYNDGTWPACCTQSDFNEKEISTLHDALEKYWPSLSC 379
Query: 400 SKSGTCFSGKGLFWAHEWEKHGTCSAPVVQDE 495
+C KG FWAHEWEKHGTCS+PVV DE
Sbjct: 380 GSPSSCRGTKGSFWAHEWEKHGTCSSPVVHDE 475
Score = 76.7 bits (161), Expect(2) = 1e-050
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +2
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 128 QREFDYFALSLQWPGTYCRHTRHCCSKNACCR 223
Score = 57.0 bits (118), Expect(3) = 4e-022
Identities = 27/44 (61%), Positives = 28/44 (63%)
Frame = -3 / -1
Query: 494 SS*TTGAEQVPCFSHS*AQKSPLPLKHVPDLEQ*RDGQYLSSTS 363
SS*TTG EQVPCFSHS AQK P + Q RDGQY S S
Sbjct: 474 SS*TTGEEQVPCFSHSCAQKDPFVPRQDDGEPQLRDGQYFSRAS 343
Score = 50.1 bits (103), Expect(3) = 4e-022
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -3 / -1
Query: 266 NVWSGSERQQPLVAQQWRVEAQMVPGHWRESAK*SNSRC 150
+V + + RQQ + QQWRV Q VPGH R+ AK*SNS C
Sbjct: 243 SVGAFAPRQQAFLEQQWRVWRQ*VPGHCRDKAK*SNSLC 127
Score = 35.9 bits (72), Expect(3) = 4e-022
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 320 QHDGQVPSS*SGHSPWIVN 264
QH G VPS *SG PWIVN
Sbjct: 300 QHAGHVPSL*SGQRPWIVN 244
>gb|CK106189.1|CK106189 UB11CPH09.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB11CPH09 5', mRNA sequence
Length = 543
Score = 86.3 bits (182), Expect(3) = 6e-049
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +1 / +3
Query: 220 CCATNGCCRSEPLQTFTIHGLWPDYDDGTWPSCCRRTQFEMDKILPLKEVLDKYWPSLYC 399
C C + FTIHGLWPDY+DGTWP+CC ++ F +I L + L+KYWPSL C
Sbjct: 174 CSKNACCRGANAPTEFTIHGLWPDYNDGTWPACCTQSDFNEKEISTLHDALEKYWPSLSC 353
Score = 76.7 bits (161), Expect(3) = 6e-049
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1 / +3
Query: 151 QREFDYFALSLQWPGTICASTRHCCATNGCCR 246
QREFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 102 QREFDYFALSLQWPGTYCRHTRHCCSKNACCR 197
Score = 70.7 bits (148), Expect(3) = 6e-049
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +1 / +1
Query: 415 CFSGKGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKY 537
C KG F AHEWEKHGTCS+PVV DE YF+ L++Y KY
Sbjct: 370 CRGTKGSFRAHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKY 492
>gb|CA934198.1|CA934198 MTU3TS.P4.D11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 604
Score = 150 bits (323), Expect(3) = 3e-041
Identities = 54/99 (54%), Positives = 73/99 (73%)
Frame = +1 / -3
Query: 427 KGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVSNGKEYALSD 606
KG FWAHEWEKH TCS+PV DE YF+ L++Y KYNVT++L+ G SN ++Y L
Sbjct: 536 KGSFWAHEWEKHETCSSPVAHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGG 357
Query: 607 VIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 356 IVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 240
Score = 30.4 bits (60), Expect(3) = 3e-041
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / -2
Query: 370 LDKYWPSLYCSKSGTC 417
L+KYWPSL C +C
Sbjct: 594 LEKYWPSLRCGSPSSC 547
Score = 26.7 bits (52), Expect(3) = 3e-041
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1 / -3
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVL 810
+ N + CP+Y++LP Y L L
Sbjct: 239 IQNDMYTSKSSCPKYVSLPAYVSLGL 162
>gb|CA933881.1|CA933881 MTU3TS.P13.H01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 537
Score = 154 bits (331), Expect(2) = 6e-039
Identities = 55/99 (55%), Positives = 74/99 (74%)
Frame = +1 / -2
Query: 427 KGLFWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVSNGKEYALSD 606
KG FW HEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G SN ++Y L
Sbjct: 536 KGSFWGHEWEKHGTCSSPVVHDEYSYFSTTLNVYLKYNVTKVLNEAGYVPSNSEKYPLGG 357
Query: 607 VIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 356 IVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 240
Score = 27.2 bits (53), Expect(2) = 6e-039
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1 / -2
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y+ LP Y L L + E+
Sbjct: 239 IQNDMYTSKSTCPKYVGLPAYVSLGLDGAGTEV 141
>gb|DT521015.1|DT521015 WS02033.B21_C20 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02033_C20 3', mRNA sequence
Length = 727
Score = 142 bits (305), Expect(2) = 7e-036
Identities = 51/94 (54%), Positives = 71/94 (75%)
Frame = +1 / -1
Query: 442 AHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQVSNGKEYALSDVIDTI 621
AHEWEKHGTCS+PVV DE YF+ L++Y KYNVT++L+ G SN ++Y L ++ I
Sbjct: 727 AHEWEKHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVAAI 548
Query: 622 KHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
++AF +PQ+VC +G +EELR+CF K+ KPRDC+
Sbjct: 547 ENAFHATPQLVCSKGDLEELRICFYKDFKPRDCV 446
Score = 29.0 bits (57), Expect(2) = 7e-036
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / -1
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 445 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 347
>gb|BI138831.1|BI138831 F116P94Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 441
Score = 77.1 bits (162), Expect(4) = 4e-027
Identities = 27/59 (45%), Positives = 42/59 (71%)
Frame = +1 / -2
Query: 547 EMLSSGGIQVSNGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEELRLCFDKELKPRDCL 723
++L+ G SN ++Y L ++ I++AF +PQ+VC +G +EELRLCF K+ KPRDC+
Sbjct: 314 KVLNEAGYVPSNSEKYPLGGIVSAIENAFHATPQLVCSKGDLEELRLCFYKDFKPRDCV 138
Score = 38.6 bits (78), Expect(4) = 4e-027
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 427 KGLFWAHEWEKHG 465
KG FWAHEWEKHG
Sbjct: 438 KGSFWAHEWEKHG 400
Score = 32.2 bits (64), Expect(4) = 4e-027
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 463 GTCSAPVVQDELQYFT 510
GTCS+PVV DE YF+
Sbjct: 401 GTCSSPVVHDEYSYFS 354
Score = 29.0 bits (57), Expect(4) = 4e-027
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / -2
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 137 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 39
>gb|CV270398.1|CV270398 WS0151.B21_O06 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_O06 3', mRNA sequence
Length = 527
Score = 100 bits (213), Expect(2) = 2e-023
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = +1 / -1
Query: 502 YFTLALDLYSKYNVTEMLSSGGIQVSNGKEYALSDVIDTIKHAFGGSPQIVCKRGSIEEL 681
YF+ L++Y KYNVT++L+ G SN ++Y L ++ I++AF +PQ+VC +G +EEL
Sbjct: 524 YFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVSAIENAFHATPQLVCSKGDLEEL 345
Query: 682 RLCFDKELKPRDCL 723
RLCF K+ KPRDC+
Sbjct: 344 RLCFYKDFKPRDCV 303
Score = 29.0 bits (57), Expect(2) = 2e-023
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / -1
Query: 733 LANGSVSKSKHCPRYITLPTYDPLVLANSTVEI 831
+ N + CP+Y++LP Y L L + E+
Sbjct: 302 IQNDMYTSKSSCPKYVSLPAYVSLGLDGAGTEV 204
>gb|DN485375.1|DN485375 M129F02.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M129F02 3', mRNA sequence
Length = 736
Score = 58.3 bits (121), Expect(4) = 1e-022
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +1 / -2
Query: 436 FWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQ 573
FW+HEWEKHGTC+ D+ YF AL L K N+ + L + GI+
Sbjct: 423 FWSHEWEKHGTCAESEEIDQHGYFEAALKLKEKANLLQALDNAGIK 286
Score = 41.4 bits (84), Expect(4) = 1e-022
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1 / -2
Query: 250 EPLQTFTIHGLWPDYDDGTWPSCCRR 327
+P+ F IHGLWP +DG++P C R
Sbjct: 597 KPVADFGIHGLWPQNEDGSYPQNCNR 520
Score = 31.8 bits (63), Expect(4) = 1e-022
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1 / -2
Query: 157 EFDYFALSLQWPGTICASTRHCC 225
+F +F QWPG+ C + CC
Sbjct: 681 DFGFFYFVQQWPGSYCDTKHSCC 613
Score = 30.4 bits (60), Expect(4) = 1e-022
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1 / -2
Query: 313 SCCRRTQFEMDKILPLKEVLDKYWPSLYCSKS 408
+C R + D+I L L K WPSL C S
Sbjct: 531 NCNRDNALDEDQISDLTSSLQKDWPSLSCPSS 436
>gb|BU869396.1|BU869396 M129F02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 641
Score = 58.3 bits (121), Expect(4) = 1e-022
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +1 / +3
Query: 436 FWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQ 573
FW+HEWEKHGTC+ D+ YF AL L K N+ + L + GI+
Sbjct: 315 FWSHEWEKHGTCAESEEIDQHGYFEAALKLKEKANLLQALDNAGIK 452
Score = 41.4 bits (84), Expect(4) = 1e-022
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1 / +3
Query: 250 EPLQTFTIHGLWPDYDDGTWPSCCRR 327
+P+ F IHGLWP +DG++P C R
Sbjct: 141 KPVADFGIHGLWPQNEDGSYPQNCNR 218
Score = 31.8 bits (63), Expect(4) = 1e-022
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1 / +3
Query: 157 EFDYFALSLQWPGTICASTRHCC 225
+F +F QWPG+ C + CC
Sbjct: 57 DFGFFYFVQQWPGSYCDTKHSCC 125
Score = 30.4 bits (60), Expect(4) = 1e-022
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1 / +3
Query: 313 SCCRRTQFEMDKILPLKEVLDKYWPSLYCSKS 408
+C R + D+I L L K WPSL C S
Sbjct: 207 NCNRDNALDEDQISDLTSSLQKDWPSLSCPSS 302
>gb|DN494843.1|DN494843 M129F02.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M129F02 5', mRNA sequence
Length = 507
Score = 58.3 bits (121), Expect(4) = 1e-022
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 436 FWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGGIQ 573
FW+HEWEKHGTC+ D+ YF AL L K N+ + L + GI+
Sbjct: 314 FWSHEWEKHGTCAESEEIDQHGYFEAALKLKEKANLLQALDNAGIK 451
Score = 41.4 bits (84), Expect(4) = 1e-022
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1 / +2
Query: 250 EPLQTFTIHGLWPDYDDGTWPSCCRR 327
+P+ F IHGLWP +DG++P C R
Sbjct: 140 KPVADFGIHGLWPQNEDGSYPQNCNR 217
Score = 31.8 bits (63), Expect(4) = 1e-022
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1 / +2
Query: 157 EFDYFALSLQWPGTICASTRHCC 225
+F +F QWPG+ C + CC
Sbjct: 56 DFGFFYFVQQWPGSYCDTKHSCC 124
Score = 30.4 bits (60), Expect(4) = 1e-022
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1 / +2
Query: 313 SCCRRTQFEMDKILPLKEVLDKYWPSLYCSKS 408
+C R + D+I L L K WPSL C S
Sbjct: 206 NCNRDNALDEDQISDLTSSLQKDWPSLSCPSS 301
>gb|BU881802.1|BU881802 UM67TF11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 656
Score = 56.1 bits (116), Expect(4) = 5e-022
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +1 / +1
Query: 436 FWAHEWEKHGTCSAPVVQDELQYFTLALDLYSKYNVTEMLSSGG 567
FW+HEWEKHGTC+ D+ YF AL L K N+ + L + G
Sbjct: 412 FWSHEWEKHGTCAESEEIDQHGYFEAALKLKEKANLLQALDNAG 543
Score = 41.4 bits (84), Expect(4) = 5e-022
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1 / +1
Query: 250 EPLQTFTIHGLWPDYDDGTWPSCCRR 327
+P+ F IHGLWP +DG++P C R
Sbjct: 238 KPVADFGIHGLWPQNEDGSYPQNCNR 315
Score = 31.8 bits (63), Expect(4) = 5e-022
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 157 EFDYFALSLQWPGTICASTRHCC 225
+F +F QWPG+ C + CC
Sbjct: 154 DFGFFYFVQQWPGSYCDTKHSCC 222
Score = 30.4 bits (60), Expect(4) = 5e-022
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1 / +1
Query: 313 SCCRRTQFEMDKILPLKEVLDKYWPSLYCSKS 408
+C R + D+I L L K WPSL C S
Sbjct: 304 NCNRDNALDEDQISDLTSSLQKDWPSLSCPSS 399
>gb|CN193388.1|CN193388 PtdH9 hybrid poplar systemically wound-induced leaf cDNA library
Populus trichocarpa x Populus deltoides cDNA 5, mRNA
sequence
Length = 393
Score = 74.4 bits (156), Expect(2) = 5e-022
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +1 / +3
Query: 154 REFDYFALSLQWPGTICASTRHCCATNGCCR 246
REFDYFALSLQWPGT C TRHCC+ N CCR
Sbjct: 117 REFDYFALSLQWPGTYCRHTRHCCSQNACCR 209
Score = 50.6 bits (104), Expect(2) = 5e-022
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1 / +2
Query: 268 TIHGLWPDYDDGTWPSC 318
TIHGLWPDY+DGTWP+C
Sbjct: 233 TIHGLWPDYNDGTWPAC 283
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 506,786,212
Number of Sequences: 369679
Number of extensions: 7643071
Number of successful extensions: 38614
Number of sequences better than 1.0e-020: 42
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 15668217825
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)