TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.2
(2027 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT517940.1|DT517940 WS02435.B21_L21 PTxD-ICC-N-A-14 Popu... 155 9e-085
gb|DT516146.1|DT516146 WS02430.B21_I16 PTxD-ICC-N-A-14 Popu... 148 1e-082
gb|DT514871.1|DT514871 WS02426.B21_A05 PTxD-ICC-N-A-14 Popu... 144 3e-076
gb|BU869595.1|BU869595 Q001H02 Populus flower cDNA library ... 192 8e-060
gb|CX169703.1|CX169703 E01_69-117_09.ab1 leaf inoculated wi... 149 2e-054
gb|DT500159.1|DT500159 PX0011.BR_G11 PT-X-FL-A-1 Populus tr... 155 2e-054
gb|BU871633.1|BU871633 Q032F11 Populus flower cDNA library ... 154 4e-054
gb|DN503017.1|DN503017 X051B06.5pR Populus wood cDNA librar... 127 1e-052
gb|BU879414.1|BU879414 V059H01 Populus flower cDNA library ... 192 3e-052
gb|AY190017.1| Populus tomentosa cell-wall invertase gene, ... 128 6e-052
gb|BU820388.1|BU820388 UA54DPF07 Populus tremula cambium cD... 182 1e-051
gb|CK320389.1|CK320389 L3P05d10 Populus stem seasonal libra... 148 3e-050
gb|BU897099.1|BU897099 X051B06 Populus wood cDNA library Po... 127 1e-049
gb|BU818306.1|BU818306 UA28DPE12 Populus tremula cambium cD... 137 1e-049
gb|BP922671.1|BP922671 BP922671 full-length enriched poplar... 98 1e-048
gb|CX654517.1|CX654517 PO02011E09 Poplar SC cDNA library Po... 193 2e-048
gb|CX168427.1|CX168427 B06_69-85_04.ab1 leaf inoculated wit... 149 6e-047
gb|CA934423.1|CA934423 MTU3TS.P7.D08 Aspen stem cDNA Librar... 100 2e-045
gb|AJ777184.1|AJ777184 AJ777184 Populus euphratica root 3-6... 100 5e-044
gb|DT509002.1|DT509002 WS02422.BR_I07 PTxD-ICC-N-A-14 Popul... 144 8e-044
gb|DT513609.1|DT513609 WS02422.B21_I07 PTxD-ICC-N-A-14 Popu... 144 8e-044
gb|AY391776.1| Populus alba x Populus tremula putative inve... 158 5e-043
gb|BU878522.1|BU878522 V048D07 Populus flower cDNA library ... 66 8e-040
gb|DN493003.1|DN493003 X051B06.3pR Populus wood cDNA librar... 120 8e-035
gb|CA933245.1|CA933245 MTU5CS.P5.E03 Aspen stem cDNA Librar... 77 5e-034
gb|CA933512.1|CA933512 MTU5CS.P9.A07 Aspen stem cDNA Librar... 77 5e-034
gb|BI128034.1|BI128034 G070P01Y Populus cambium cDNA librar... 100 1e-033
gb|CK106113.1|CK106113 UA54DPF07.5pR Populus dormant cambiu... 95 1e-031
gb|CA932912.1|CA932912 MTU5CS.P1.B01 Aspen stem cDNA Librar... 79 4e-030
gb|BP923506.1|BP923506 BP923506 full-length enriched poplar... 57 7e-023
gb|CK095793.1|CK095793 UA28DPE12.3pR Populus dormant cambiu... 83 1e-022
>gb|DT517940.1|DT517940 WS02435.B21_L21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02435_L21 3', mRNA sequence
Length = 904
Score = 155 bits (334), Expect(3) = 9e-085
Identities = 60/92 (65%), Positives = 73/92 (79%)
Frame = +1 / -2
Query: 1030 YDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRA 1209
+DP+ RRILWGWANESD+ D KGWAGIQ IPR VWLDPSGKQLLQWP+ E+E LR+
Sbjct: 903 FDPSTNRRILWGWANESDSVQQDRNKGWAGIQLIPRRVWLDPSGKQLLQWPVAELEKLRS 724
Query: 1210 KSVTLKNRVIKAGHHVEVTGIQTAQADVEVSF 1305
+V L+N+ + G+HVEV GI AQADV+V+F
Sbjct: 723 HNVQLRNQKLYQGYHVEVKGITAAQADVDVTF 628
Score = 144 bits (310), Expect(3) = 9e-085
Identities = 62/104 (59%), Positives = 74/104 (71%)
Frame = +1 / -2
Query: 1495 AGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 1674
A DK VL+C+D SS LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 447 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 268
Query: 1675 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 1806
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 267 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 136
Score = 102 bits (218), Expect(3) = 1e-049
Identities = 50/91 (54%), Positives = 63/91 (69%)
Frame = -1 / +2
Query: 1304 KLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMA 1125
K+TSTSA A +P+TST* P FL T + LS S+S+ GHC++CFPLGSSHT+LG+
Sbjct: 629 KVTSTSA*AAVMPLTST*YPW*SF*FLS*TLWLLSFSSSATGHCSNCFPLGSSHTLLGIN 808
Query: 1124 WIPAQPLATSSAAVSDSLAQPHRMRRRLAGS 1032
IPA PL S SDSLAQPH++ + GS
Sbjct: 809 *IPAHPLFLSCCTESDSLAQPHKILLFVLGS 901
Score = 91.3 bits (193), Expect(3) = 1e-049
Identities = 52/111 (46%), Positives = 65/111 (58%)
Frame = -1 / +2
Query: 1826 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 1647
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 116 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 295
Query: 1646 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGLSPA 1494
TT+ SI+LL S STNPA G Y ++L+ S H T LS A
Sbjct: 296 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 448
Score = 54.2 bits (112), Expect(3) = 9e-085
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1 / -2
Query: 1363 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 573 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 442
Score = 42.8 bits (87), Expect(3) = 1e-049
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / +2
Query: 1496 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 1404
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 440 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 532
>gb|DT516146.1|DT516146 WS02430.B21_I16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_I16 3', mRNA sequence
Length = 893
Score = 148 bits (318), Expect(3) = 1e-082
Identities = 58/86 (67%), Positives = 69/86 (80%)
Frame = +1 / -2
Query: 1048 RRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLK 1227
RRILWGWANESD+ D KGWAGIQ IPR VWLDPSGKQLLQWP+ E+E LR+ +V L+
Sbjct: 883 RRILWGWANESDSVQQDRNKGWAGIQLIPRRVWLDPSGKQLLQWPVAELEKLRSHNVQLR 704
Query: 1228 NRVIKAGHHVEVTGIQTAQADVEVSF 1305
N+ + G+HVEV GI AQADV+V+F
Sbjct: 703 NQKLYQGYHVEVKGITAAQADVDVTF 626
Score = 144 bits (310), Expect(3) = 1e-082
Identities = 62/104 (59%), Positives = 74/104 (71%)
Frame = +1 / -2
Query: 1495 AGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 1674
A DK VL+C+D SS LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 445 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 266
Query: 1675 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 1806
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 265 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 134
Score = 101 bits (215), Expect(3) = 3e-049
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -1 / +3
Query: 1304 KLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMA 1125
K+TSTSA A +P+TST* P FL T + LS S+S+ GHC++CFPLGSSHT+LG+
Sbjct: 627 KVTSTSA*AAVMPLTST*YPW*SF*FLS*TLWLLSFSSSATGHCSNCFPLGSSHTLLGIN 806
Query: 1124 WIPAQPLATSSAAVSDSLAQPHRM 1053
IPA PL S SDSLAQPH++
Sbjct: 807 *IPAHPLFLSCCTESDSLAQPHKI 878
Score = 91.3 bits (193), Expect(3) = 3e-049
Identities = 52/111 (46%), Positives = 65/111 (58%)
Frame = -1 / +3
Query: 1826 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 1647
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 114 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 293
Query: 1646 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGLSPA 1494
TT+ SI+LL S STNPA G Y ++L+ S H T LS A
Sbjct: 294 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 446
Score = 54.2 bits (112), Expect(3) = 1e-082
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1 / -2
Query: 1363 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 571 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 440
Score = 42.8 bits (87), Expect(3) = 3e-049
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / +3
Query: 1496 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 1404
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 438 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 530
>gb|DT514871.1|DT514871 WS02426.B21_A05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_A05 3', mRNA sequence
Length = 857
Score = 144 bits (310), Expect(3) = 3e-076
Identities = 62/104 (59%), Positives = 74/104 (71%)
Frame = +1 / -1
Query: 1495 AGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 1674
A DK VL+C+D SS LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 440 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 261
Query: 1675 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 1806
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 260 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 129
Score = 127 bits (272), Expect(3) = 3e-076
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = +1 / -1
Query: 1069 ANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAG 1248
ANESD+ D KGWAGIQ IPR VWLDPSGKQLLQWP+ E+E LR+ +V L+N+ + G
Sbjct: 857 ANESDSVQQDRNKGWAGIQLIPRRVWLDPSGKQLLQWPVAELEKLRSHNVQLRNQKLYQG 678
Query: 1249 HHVEVTGIQTAQADVEVSF 1305
+HVEV GI AQADV+V+F
Sbjct: 677 YHVEVKGITAAQADVDVTF 621
Score = 91.3 bits (193), Expect(3) = 2e-045
Identities = 52/111 (46%), Positives = 65/111 (58%)
Frame = -1 / +1
Query: 1826 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 1647
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 109 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 288
Query: 1646 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGLSPA 1494
TT+ SI+LL S STNPA G Y ++L+ S H T LS A
Sbjct: 289 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 441
Score = 89.0 bits (188), Expect(3) = 2e-045
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -1 / +1
Query: 1304 KLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMA 1125
K+TSTSA A +P+TST* P FL T + LS S+S+ GHC++CFPLGSSHT+LG+
Sbjct: 622 KVTSTSA*AAVMPLTST*YPW*SF*FLS*TLWLLSFSSSATGHCSNCFPLGSSHTLLGIN 801
Query: 1124 WIPAQPLATSSAAVSDSL 1071
IPA PL S SDSL
Sbjct: 802 *IPAHPLFLSCCTESDSL 855
Score = 54.2 bits (112), Expect(3) = 3e-076
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1 / -1
Query: 1363 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 566 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 435
Score = 42.8 bits (87), Expect(3) = 2e-045
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / +1
Query: 1496 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 1404
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 433 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 525
>gb|BU869595.1|BU869595 Q001H02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 608
Score = 192 bits (413), Expect(3) = 8e-060
Identities = 71/89 (79%), Positives = 78/89 (87%)
Frame = +1 / +2
Query: 181 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 360
VN + RTGYHFQP +NWINDPNAPMYYKG YH FYQYNPKGAVWGNIVWAHSVS+DLINW
Sbjct: 194 VNQVHRTGYHFQPLRNWINDPNAPMYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINW 373
Query: 361 VALEPALRPSIPGDRYGCWSGSATVLPDG 447
+LEPA+ PS D YGCWSGSAT+LP+G
Sbjct: 374 ESLEPAIYPSKWFDSYGCWSGSATILPNG 460
Score = 118 bits (252), Expect(2) = 2e-031
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = -1 / -3
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
P G VA+PDQ P LS + G AGS +QL++S +TE A TMLPHTAPLGLYW* +W
Sbjct: 459 PFGRIVAEPDQHP*LSNHLEG*IAGSRDSQLIKSFETE*AQTMLPHTAPLGLYW*NRW*S 280
Query: 266 PL*YMGALGSLIQFLGGWKWYPVL 195
PL*Y+GA GSLIQFL G K YPVL
Sbjct: 279 PL*YIGAFGSLIQFLRG*K*YPVL 208
Score = 57.0 bits (118), Expect(3) = 8e-060
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1 / +2
Query: 493 NYQVQNVAYPKNVSDPLLREWVKPSHNPVIVPE 591
N Q+QN A P N+SDP LREWVKP NP++ P+
Sbjct: 500 NSQIQNYAVPANMSDPYLREWVKPDDNPILNPD 598
Score = 39.6 bits (80), Expect(2) = 2e-031
Identities = 17/29 (58%), Positives = 17/29 (58%)
Frame = -1 / -3
Query: 590 SGTMTGLCEGFTHSRSSGSDTFFGYATFW 504
SG GL G THSR GSD F G A FW
Sbjct: 597 SGFSIGLSSGLTHSRRYGSDMFAGTA*FW 511
Score = 22.1 bits (42), Expect(3) = 8e-060
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 448 GGPVIMYTGV 477
G PVI+YTG+
Sbjct: 458 GEPVILYTGI 487
>gb|CX169703.1|CX169703 E01_69-117_09.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 716
Score = 149 bits (320), Expect(2) = 2e-054
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +1 / +2
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 375
RT YHFQP KNW+NDP+ P+++KGWYH FYQYNP AVWGNI W H+VS DLI+W+ L
Sbjct: 197 RTAYHFQPEKNWMNDPDGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDLIHWLYLPF 376
Query: 376 ALRPSIPGDRYGCWSGSATVLPDG 447
A+ P D G W+GSAT+LPDG
Sbjct: 377 AMVPDHWYDINGVWTGSATLLPDG 448
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 45/84 (53%), Positives = 51/84 (60%)
Frame = -1 / -3
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PSG +VADP P++S G A +Q +RS DT H MLPHTA GLYW* +WYH
Sbjct: 447 PSGRSVADPVHTPFISYQ*SGTMANGR*SQ*IRSVDTAWPHVMLPHTAESGLYW*NRWYH 268
Query: 266 PL*YMGALGSLIQFLGGWKWYPVL 195
PL* G GS IQF G KW VL
Sbjct: 267 PL*NNGPSGSFIQFFSG*KW*AVL 196
Score = 85.4 bits (180), Expect(2) = 2e-054
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +1 / +2
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRGP 645
QVQN+AYP N+SDPLL +WVK +NPVI P G +FRDPTTAW GP
Sbjct: 491 QVQNLAYPANLSDPLLIDWVKYPNNPVITPPNGTETDEFRDPTTAWMGP 637
Score = 51.5 bits (106), Expect(2) = 2e-029
Identities = 24/48 (50%), Positives = 26/48 (54%)
Frame = -1 / -3
Query: 644 GPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWT 501
GP AVVGS N +P G +TGL T S GSD GYA FWT
Sbjct: 636 GPIHAVVGSLNSSVSVPFGGVITGLLGYLTQSIRRGSDRLAGYARFWT 493
>gb|DT500159.1|DT500159 PX0011.BR_G11 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0011_G11
5', mRNA sequence
Length = 673
Score = 155 bits (334), Expect(2) = 2e-054
Identities = 54/84 (64%), Positives = 67/84 (79%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 375
RT +HFQP +NW+NDPN P+YYKGWYHFFYQYNP AVWG+IVW H+VS+DLI+W+ L
Sbjct: 142 RTAFHFQPEENWMNDPNGPLYYKGWYHFFYQYNPHAAVWGDIVWGHAVSKDLIHWLHLPL 321
Query: 376 ALRPSIPGDRYGCWSGSATVLPDG 447
A+ D+ G W+GSAT+LPDG
Sbjct: 322 AMVADKWYDKNGVWTGSATILPDG 393
Score = 102 bits (217), Expect(2) = 8e-032
Identities = 46/84 (54%), Positives = 52/84 (61%)
Frame = -1 / -3
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PSG VA+P Q P+LS + A +Q ++S DT TM PHTA GLYW*KKWY
Sbjct: 392 PSGRIVAEPVQTPFLSYHLSATIANGRWSQWIKSFDTAWPQTMSPHTAACGLYW*KKWYQ 213
Query: 266 PL*YMGALGSLIQFLGGWKWYPVL 195
PL*Y G LGS IQF G KW VL
Sbjct: 212 PL*YNGPLGSFIQFSSG*KWKAVL 141
Score = 79.0 bits (166), Expect(2) = 2e-054
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWR 639
QVQN+AYP + DPLL +WVK S NPV+VP GI A FRDPTTAW+
Sbjct: 436 QVQNLAYPADHDDPLLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 576
Score = 56.5 bits (117), Expect(2) = 8e-032
Identities = 26/46 (56%), Positives = 28/46 (60%)
Frame = -1 / -3
Query: 635 QAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW 498
QAVVGSR +A +P GT TGL E TH R GS GYA F TW
Sbjct: 572 QAVVGSRKSLAPIPGGGTKTGLPEYLTHLRRRGSSWSAGYARFCTW 435
>gb|BU871633.1|BU871633 Q032F11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 589
Score = 154 bits (330), Expect(4) = 4e-054
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = +1 / +2
Query: 181 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 360
VN + RTGYHFQP +NWINDPNAPMYYKG YH FYQYNPKGAVWGNIVWAHSVS+DLINW
Sbjct: 194 VNQVHRTGYHFQPLRNWINDPNAPMYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINW 373
Query: 361 VALEPA 378
+LEPA
Sbjct: 374 ESLEPA 391
Score = 99.1 bits (210), Expect(2) = 5e-025
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = -1 / -2
Query: 383 LSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWY 204
+ AGS +QL++S +TE A TMLPHTAPLGLYW* +W PL*Y+GA GSLIQFL G K Y
Sbjct: 396 VDAGSRDSQLIKSFETE*AQTMLPHTAPLGLYW*NRW*SPL*YIGAFGSLIQFLRG*K*Y 217
Query: 203 PVL 195
PVL
Sbjct: 216 PVL 208
Score = 52.8 bits (109), Expect(4) = 4e-054
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 493 NYQVQNVAYPKNVSDPLLREWVKPSHNPVI 582
N Q QN A P N+SDP LREWVKP NP++
Sbjct: 499 NSQTQNYAVPANMSDPYLREWVKPDDNPIL 588
Score = 40.9 bits (83), Expect(4) = 4e-054
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 385 PSIPGDRYGCWSGSATVLPDG 447
PS D YGCWSGSAT+LP+G
Sbjct: 397 PSKWFDSYGCWSGSATILPNG 459
Score = 36.8 bits (74), Expect(2) = 5e-025
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -1 / -3
Query: 575 GLCEGFTHSRSSGSDTFFGYATFW 504
GL G THSR GSD F G A FW
Sbjct: 581 GLSSGLTHSRRYGSDMFAGTA*FW 510
Score = 22.1 bits (42), Expect(4) = 4e-054
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 448 GGPVIMYTGV 477
G PVI+YTG+
Sbjct: 457 GEPVILYTGI 486
>gb|DN503017.1|DN503017 X051B06.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X051B06 5', mRNA sequence
Length = 608
Score = 127 bits (271), Expect(3) = 1e-052
Identities = 49/85 (57%), Positives = 62/85 (72%)
Frame = +1 / +2
Query: 1057 LWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLKNRV 1236
+WGW NESD+ DD+ KGW+G+Q+IPR +WLD SGKQL+QWPIEE+ L K V+ ++
Sbjct: 5 IWGWVNESDSIEDDMDKGWSGLQSIPRHIWLDRSGKQLVQWPIEEINKLHGKKVSFLDKK 184
Query: 1237 IKAGHHVEVTGIQTAQADVEVSFEV 1311
I VEV GI AQADVEV FE+
Sbjct: 185 IDGESIVEVQGITAAQADVEVVFEL 259
Score = 62.9 bits (131), Expect(3) = 1e-052
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1 / +2
Query: 1510 VVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 1671
VVLMC+D ++S+ + + T+ F+D D ISLRSLID S++ESFG G+
Sbjct: 443 VVLMCSDQSRSALRDEVDKTTYGAFIDIDPQRENISLRSLIDHSIIESFGGEGR 604
Score = 57.0 bits (118), Expect(3) = 1e-052
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +1 / +2
Query: 1357 AYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
A D ++LC A ++G +GPFGL LA+ + E+TA+FFR+FK G
Sbjct: 296 AVDPQQLCSDANASIKGRLGPFGLLTLATKDLTEQTAIFFRIFKGLKG 439
>gb|BU879414.1|BU879414 V059H01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 600
Score = 192 bits (413), Expect(2) = 3e-052
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 375
RTGYHFQPPKNWINDPN P+YYKG YH FYQYNPKGAVWGNIVWAHSVS+DLINW +LEP
Sbjct: 235 RTGYHFQPPKNWINDPNGPLYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINWESLEP 414
Query: 376 ALRPSIPGDRYGCWSGSATVLPDG 447
A+ PS D YGCWSGSAT+LP+G
Sbjct: 415 AIYPSKWFDNYGCWSGSATILPNG 486
Score = 132 bits (283), Expect(2) = 6e-032
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
P G VADPDQ P LS + G AGS +QL++S +TE A TMLPHTAPLGLYW* +WY
Sbjct: 485 PFGRIVADPDQHP*LSNHLEG*IAGSRDSQLIKSFETE*AQTMLPHTAPLGLYW*NRWYS 306
Query: 266 PL*YMGALGSLIQFLGGWKWYPVL 195
PL*Y G GSLIQFLGGWK YPVL
Sbjct: 305 PL*YKGPFGSLIQFLGGWK*YPVL 234
Score = 35.0 bits (70), Expect(2) = 3e-052
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 514 AYPKNVSDPLLREWVKP 564
A P N SDP LREWVKP
Sbjct: 548 AVPANSSDPYLREWVKP 598
Score = 26.7 bits (52), Expect(2) = 6e-032
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 563 GFTHSRSSGSDTFFGYA 513
G THSR GSD F G A
Sbjct: 597 GLTHSRRYGSDEFAGTA 547
>gb|AY190017.1| Populus tomentosa cell-wall invertase gene, partial cds
Length = 518
Score = 128 bits (274), Expect(4) = 6e-052
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = +1 / +1
Query: 271 YHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
YH FYQYNPKGAVWGNIVWAHSVS+DLINW +LEPA+ PS D YGCWSGSAT+LP+G
Sbjct: 1 YHLFYQYNPKGAVWGNIVWAHSVSKDLINWESLEPAIYPSKWFDNYGCWSGSATILPNG 177
Score = 87.2 bits (184), Expect(4) = 6e-052
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +1 / +1
Query: 493 NYQVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRGPG 648
N Q+QN A P N SDP LREWVKP NP++ P+ +NA+ FRDPTTAWR G
Sbjct: 217 NRQIQNYAVPANSSDPYLREWVKPDDNPIVYPDPSVNASAFRDPTTAWRVGG 372
Score = 85.8 bits (181), Expect(2) = 3e-027
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKW 273
P G VADPDQ P LS + G AGS +QL++S DTE A TMLPHTAPLGLYW* +W
Sbjct: 176 PFGRIVADPDQHP*LSNHLEG*IAGSRDSQLIKSFDTEWAQTMLPHTAPLGLYW*NRW 3
Score = 57.4 bits (119), Expect(2) = 3e-027
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = -1 / -1
Query: 647 PGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFW 504
P QAVVGSRN +A SG GL G THSR GSD F G A FW
Sbjct: 371 PPTLQAVVGSRNALAFTLGSGYTIGLSSGLTHSRRYGSDEFAGTA*FW 228
Score = 24.0 bits (46), Expect(4) = 6e-052
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 775 TGMWECPDF 801
TGM ECPDF
Sbjct: 490 TGMVECPDF 516
Score = 23.1 bits (44), Expect(4) = 6e-052
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1 / +1
Query: 697 RGVAYVYXXXXXXXXXXXXXPLHS 768
RG+AY+Y PLHS
Sbjct: 409 RGIAYLYRSLDFKKWFKAKHPLHS 480
>gb|BU820388.1|BU820388 UA54DPF07 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 562
Score = 182 bits (392), Expect(3) = 1e-051
Identities = 67/85 (78%), Positives = 74/85 (87%)
Frame = +1 / +2
Query: 181 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 360
VN + RTGYHFQP +NWINDPNAPMYYKG YH FYQYNPKGAVWGNIVWAHSV++DLINW
Sbjct: 194 VNQVHRTGYHFQPLRNWINDPNAPMYYKGLYHLFYQYNPKGAVWGNIVWAHSVTKDLINW 373
Query: 361 VALEPALRPSIPGDRYGCWSGSATV 435
+LEPA+ PS D YGCWSGSAT+
Sbjct: 374 ESLEPAIYPSKWFDSYGCWSGSATI 448
Score = 113 bits (241), Expect(2) = 2e-026
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = -1 / -2
Query: 431 VADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYHPL*YM 252
VA+PDQ P LS + G AGS +QL+RS TE A TMLPHTAPLGLYW* +W PL*Y+
Sbjct: 444 VAEPDQHP*LSNHLEG*IAGSRDSQLIRSFVTE*AQTMLPHTAPLGLYW*NRW*SPL*YI 265
Query: 251 GALGSLIQFLGGWKWYPVL 195
GA GSLIQFL G K YPVL
Sbjct: 264 GAFGSLIQFLRG*K*YPVL 208
Score = 39.1 bits (79), Expect(3) = 1e-051
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1 / +1
Query: 493 NYQVQNVAYPKNVSDPLLREW 555
N Q+QN A P N+SDP LREW
Sbjct: 499 NSQIQNYAVPANMSDPYLREW 561
Score = 27.6 bits (54), Expect(2) = 2e-026
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1 / -3
Query: 554 HSRSSGSDTFFGYATFW 504
HSR GSD F G A FW
Sbjct: 560 HSRRYGSDMFAGTA*FW 510
Score = 22.1 bits (42), Expect(3) = 1e-051
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 448 GGPVIMYTGV 477
G PVI+YTG+
Sbjct: 457 GEPVILYTGI 486
>gb|CK320389.1|CK320389 L3P05d10 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 832
Score = 148 bits (318), Expect(3) = 3e-050
Identities = 62/104 (59%), Positives = 76/104 (73%)
Frame = +1 / +2
Query: 1495 AGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 1674
A DK VL+C+D SS LY+P+FAGFVD D+++ K+SLRSLID SVVESFGAGG+T
Sbjct: 338 AVDKHKVLLCSDARSSSLGEGLYKPSFAGFVDVDLTDKKLSLRSLIDHSVVESFGAGGRT 517
Query: 1675 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 1806
I SRVYP++A+ + A LYVFNNG + V L AW M PVMN
Sbjct: 518 AITSRVYPTIAVFEKAHLYVFNNGSETITVENLNAWSMNLPVMN 649
Score = 91.3 bits (193), Expect(3) = 2e-027
Identities = 51/104 (49%), Positives = 63/104 (60%)
Frame = -1 / -2
Query: 1805 FMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIR 1626
F+TG FI A+R T+ +LPLLNT + A A G*TL+ M VLPPAPKLSTT+ SI+
Sbjct: 648 FITGKFILQALRFSTVMVSLPLLNTYK*AFSKTAIVG*TLDVMAVLPPAPKLSTTE*SIK 469
Query: 1625 LLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGLSPA 1494
LL + S STNPA G Y ++L+ S H T LS A
Sbjct: 468 LLSESFLSVKSTSTNPAKDGLYSPSPREELLASEHKRTLCLSTA 337
Score = 50.1 bits (103), Expect(3) = 3e-050
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +1 / +2
Query: 1363 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
DA +C K + G+GPFGL LAS N +E T VFF+VFK
Sbjct: 212 DALDVCAQKGSKAPSGLGPFGLLTLASENLEEFTPVFFKVFK 337
Score = 42.3 bits (86), Expect(3) = 2e-027
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -1 / -2
Query: 1496 AAGLNTLKNTAVLSLRLAEASTHSPNGPTP 1407
+ LNTLK T V S R +EA+ SPNGP+P
Sbjct: 345 STALNTLKKTGVNSSRFSEANVKSPNGPSP 256
Score = 40.5 bits (82), Expect(3) = 3e-050
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1 / +2
Query: 1192 VEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSF 1305
+E LR +V L + + G+ VEV GI AQADV+V+F
Sbjct: 44 LEKLRGHNVQLTFQKLNQGYQVEVKGITAAQADVDVTF 157
Score = 28.1 bits (55), Expect(3) = 2e-027
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / -2
Query: 1304 KLTSTSACAVCIPVTST*CPAL 1239
K+TSTSA A +P+TST* P L
Sbjct: 156 KVTSTSA*AAVMPLTST**PWL 91
>gb|BU897099.1|BU897099 X051B06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 585
Score = 127 bits (271), Expect(3) = 1e-049
Identities = 49/85 (57%), Positives = 62/85 (72%)
Frame = +1 / +3
Query: 1057 LWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLKNRV 1236
+WGW NESD+ DD+ KGW+G+Q+IPR +WLD SGKQL+QWPIEE+ L K V+ ++
Sbjct: 6 IWGWVNESDSIEDDMDKGWSGLQSIPRHIWLDRSGKQLVQWPIEEINKLHGKKVSFLDKK 185
Query: 1237 IKAGHHVEVTGIQTAQADVEVSFEV 1311
I VEV GI AQADVEV FE+
Sbjct: 186 IDGESIVEVQGITAAQADVEVVFEL 260
Score = 57.0 bits (118), Expect(3) = 1e-049
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +1 / +3
Query: 1357 AYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
A D ++LC A ++G +GPFGL LA+ + E+TA+FFR+FK G
Sbjct: 297 AVDPQQLCSDANASIKGRLGPFGLLTLATKDLTEQTAIFFRIFKGLKG 440
Score = 52.8 bits (109), Expect(3) = 1e-049
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1 / +3
Query: 1510 VVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVE 1650
VVLMC+D ++S+ + + T+ F+D D ISLRSLID S++E
Sbjct: 444 VVLMCSDQSRSALRDEVDKTTYGAFIDIDPQRENISLRSLIDHSIIE 584
>gb|BU818306.1|BU818306 UA28DPE12 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 450
Score = 137 bits (294), Expect(3) = 1e-049
Identities = 51/66 (77%), Positives = 54/66 (81%)
Frame = +1 / +2
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 1167
LR DYGNFYASKTF+DP+ RRILWGWANESD D KGWAGI IPR VWLDPSGKQ
Sbjct: 251 LRLDYGNFYASKTFFDPSTNRRILWGWANESDAVQQDTNKGWAGILLIPRKVWLDPSGKQ 430
Query: 1168 LLQWPI 1185
LLQWP+
Sbjct: 431 LLQWPV 448
Score = 86.8 bits (183), Expect(3) = 8e-021
Identities = 37/60 (61%), Positives = 44/60 (73%)
Frame = -1 / -1
Query: 1181 GHCNSCFPLGSSHTVLGMAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
GHC++CFPLGSSHT LG+ IPA PL S SDSLAQPH++ + GS NVL+A*K P
Sbjct: 444 GHCSNCFPLGSSHTFLGINRIPAHPLFVSC*TASDSLAQPHKILLFVLGSKNVLEA*KFP 265
Score = 59.3 bits (123), Expect(3) = 1e-049
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1 / +2
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDD 966
G VKH LK SLDL RY+YYT+GTY + E+Y PD+
Sbjct: 119 GQNVKHALKVSLDLTRYEYYTLGTYDNKKEKYFPDE 226
Score = 40.0 bits (81), Expect(3) = 1e-049
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / +2
Query: 775 TGMWECPDFYPVSKGG 822
TGMWECPDF+PVS G
Sbjct: 44 TGMWECPDFFPVSSFG 91
Score = 29.0 bits (57), Expect(3) = 8e-021
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 809 TG*KSGHSHIPV 774
TG KSGHSHIPV
Sbjct: 78 TGKKSGHSHIPV 43
Score = 23.5 bits (45), Expect(3) = 8e-021
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1 / -1
Query: 965 SSGTYRSALGWYVPTVXXXXXXXXRLFLSTCFTLGP 858
SSG Y S L VP+V +L + CFT P
Sbjct: 225 SSGKYFSFLLS*VPSV*YSYLVRSKLTFNACFTFCP 118
>gb|BP922671.1|BP922671 BP922671 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-010_G04.f 5', mRNA sequence
Length = 640
Score = 98.2 bits (208), Expect(5) = 1e-048
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1 / +3
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
+RYDYG FYASKTFYD +K RR+LWGW ESD+ DV KGWA +Q IPRTV D
Sbjct: 438 IRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVWD 602
Score = 57.0 bits (118), Expect(5) = 1e-048
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +3
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 306 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 425
Score = 56.5 bits (117), Expect(5) = 1e-048
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1 / +3
Query: 541 LLREWVKPSHNPVIVPEGGINATQFRDPTTAWR 639
LL +WVK S NPV+VP GI A FRDPTTAW+
Sbjct: 3 LLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 101
Score = 40.5 bits (82), Expect(5) = 1e-048
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DFYPVSK G
Sbjct: 231 TGMWECVDFYPVSKTG 278
Score = 25.8 bits (50), Expect(5) = 1e-048
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 1141 VWLDPSGKQLLQWPI 1185
VW +G LLQWP+
Sbjct: 594 VWDTKTGSNLLQWPV 638
>gb|CX654517.1|CX654517 PO02011E09 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO02011E09 5', mRNA sequence
Length = 426
Score = 193 bits (417), Expect = 2e-048
Identities = 74/106 (69%), Positives = 88/106 (83%)
Frame = +1 / +3
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 1167
LRYDYGNFYASKTF+DP+K RRILWGWANESD+ D+ KGWAGIQ IPR VWLDPSGKQ
Sbjct: 27 LRYDYGNFYASKTFFDPSKNRRILWGWANESDSVQQDMNKGWAGIQLIPRRVWLDPSGKQ 206
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSF 1305
LLQWP+ E+E R+ +V L+N+ + G+HVEV GI AQADV+V+F
Sbjct: 207 LLQWPVAELEKXRSHNVQLRNQKLYQGYHVEVKGITAAQADVDVTF 344
Score = 113 bits (241), Expect = 5e-024
Identities = 57/101 (56%), Positives = 69/101 (68%)
Frame = -1 / -3
Query: 1304 KLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMA 1125
K+TSTSA A +P+TST* P FL T L S+S+ GHC++CFPLGSSHT+LG+
Sbjct: 343 KVTSTSA*AAVMPLTST*YPW*SF*FLS*TL*LLXFSSSATGHCSNCFPLGSSHTLLGIN 164
Query: 1124 WIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
IPA PL S SDSLAQPH++ L GS NVL+A*K P
Sbjct: 163 *IPAHPLFMSCCTESDSLAQPHKILLFLLGSKNVLEA*KFP 41
>gb|CX168427.1|CX168427 B06_69-85_04.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 592
Score = 149 bits (320), Expect(2) = 6e-047
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +1 / +2
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 375
RT YHFQP KNW+NDP+ P+++KGWYH FYQYNP AVWGNI W H+VS DLI+W+ L
Sbjct: 182 RTAYHFQPEKNWMNDPDGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDLIHWLYLPF 361
Query: 376 ALRPSIPGDRYGCWSGSATVLPDG 447
A+ P D G W+GSAT+LPDG
Sbjct: 362 AMVPDHWYDINGVWTGSATLLPDG 433
Score = 99.1 bits (210), Expect(2) = 3e-025
Identities = 45/84 (53%), Positives = 51/84 (60%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PSG +VADP P++S G A +Q +RS DT H MLPHTA GLYW* +WYH
Sbjct: 432 PSGRSVADPVHTPFISYQ*SGTMANGR*SQ*IRSVDTAWPHVMLPHTAESGLYW*NRWYH 253
Query: 266 PL*YMGALGSLIQFLGGWKWYPVL 195
PL* G GS IQF G KW VL
Sbjct: 252 PL*NNGPSGSFIQFFSG*KW*AVL 181
Score = 60.2 bits (125), Expect(2) = 6e-047
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1 / +2
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQF 615
QVQN+AYP N+SDPLL +WVK +NPVI P G +F
Sbjct: 476 QVQNLAYPANLSDPLLIDWVKYPNNPVITPPNGTETDEF 592
Score = 37.7 bits (76), Expect(2) = 3e-025
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -1 / -2
Query: 614 NCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWT 501
N +P G +TGL T S GSD GYA FWT
Sbjct: 591 NSSVSVPFGGVITGLLGYLTQSIRRGSDRLAGYARFWT 478
>gb|CA934423.1|CA934423 MTU3TS.P7.D08 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 578
Score = 100 bits (214), Expect(4) = 2e-045
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = +1 / -3
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
+RYDYG FYASKTFYD +K RR+LWGW ESD+ DV KGWA +Q IPRTV LD
Sbjct: 270 IRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVLD 106
Score = 57.0 bits (118), Expect(4) = 2e-045
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / -3
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 402 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 283
Score = 42.3 bits (86), Expect(4) = 2e-045
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 1156 SGKQLLQWPIEEVEALRAKSVTLKNRVIKAG 1248
+G LLQWP+EEVE+LR K + +KAG
Sbjct: 99 TGSNLLQWPVEEVESLRLKGKNFNDIEVKAG 7
Score = 40.5 bits (82), Expect(4) = 2e-045
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / -3
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DFYPVSK G
Sbjct: 477 TGMWECVDFYPVSKTG 430
>gb|AJ777184.1|AJ777184 AJ777184 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400024D02F1, mRNA sequence
Length = 580
Score = 100 bits (214), Expect(4) = 5e-044
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = +1 / +1
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
+RYDYG FYASKTFYD +K RR+LWGW ESD+ DV KGWA +Q IPRTV LD
Sbjct: 415 IRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVLD 579
Score = 57.0 bits (118), Expect(4) = 5e-044
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 283 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 402
Score = 44.6 bits (91), Expect(4) = 5e-044
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +1 / +1
Query: 562 PSHNPVIVPEGGINATQFRDPTTAWR 639
P+ PV+VP GI A FRDPTTAW+
Sbjct: 1 PTRPPVLVPPPGIGAKDFRDPTTAWK 78
Score = 40.5 bits (82), Expect(4) = 5e-044
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / +1
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DFYPVSK G
Sbjct: 208 TGMWECVDFYPVSKTG 255
>gb|DT509002.1|DT509002 WS02422.BR_I07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_I07 5', mRNA sequence
Length = 634
Score = 144 bits (310), Expect(2) = 8e-044
Identities = 62/104 (59%), Positives = 74/104 (71%)
Frame = +1 / +2
Query: 1495 AGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 1674
A DK VL+C+D SS LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 200 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 379
Query: 1675 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 1806
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 380 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 511
Score = 91.3 bits (193), Expect(2) = 2e-024
Identities = 52/111 (46%), Positives = 65/111 (58%)
Frame = -1 / -2
Query: 1826 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 1647
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 531 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 352
Query: 1646 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGLSPA 1494
TT+ SI+LL S STNPA G Y ++L+ S H T LS A
Sbjct: 351 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 199
Score = 54.2 bits (112), Expect(2) = 8e-044
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1 / +2
Query: 1363 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 74 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 205
Score = 42.8 bits (87), Expect(2) = 2e-024
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / -2
Query: 1496 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 1404
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 207 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 115
>gb|DT513609.1|DT513609 WS02422.B21_I07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_I07 3', mRNA sequence
Length = 634
Score = 144 bits (310), Expect(2) = 8e-044
Identities = 62/104 (59%), Positives = 74/104 (71%)
Frame = +1 / -2
Query: 1495 AGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 1674
A DK VL+C+D SS LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 435 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 256
Query: 1675 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 1806
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 255 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 124
Score = 91.3 bits (193), Expect(2) = 2e-024
Identities = 52/111 (46%), Positives = 65/111 (58%)
Frame = -1 / +2
Query: 1826 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 1647
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 104 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 283
Query: 1646 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGLSPA 1494
TT+ SI+LL S STNPA G Y ++L+ S H T LS A
Sbjct: 284 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 436
Score = 54.2 bits (112), Expect(2) = 8e-044
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1 / -2
Query: 1363 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 561 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 430
Score = 42.8 bits (87), Expect(2) = 2e-024
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / +2
Query: 1496 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 1404
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 428 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 520
>gb|AY391776.1| Populus alba x Populus tremula putative invertase mRNA, partial cds
Length = 326
Score = 158 bits (340), Expect(2) = 5e-043
Identities = 57/74 (77%), Positives = 64/74 (86%)
Frame = +1 / +1
Query: 226 NWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDR 405
+WINDPN P+YYKG YH FYQYNPKGAVWGNIVWAHSVS+DLINW + EPA+ PS D
Sbjct: 1 DWINDPNGPLYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINWESPEPAIYPSKWFDN 180
Query: 406 YGCWSGSATVLPDG 447
YGCWSGSAT+LP+G
Sbjct: 181 YGCWSGSATILPNG 222
Score = 108 bits (230), Expect(2) = 4e-025
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
P G VADPDQ P LS + G AGS +QL++S +TE A TMLPHTAPLGLYW* +WY
Sbjct: 221 PFGRIVADPDQHP*LSNHLEG*IAGSGDSQLIKSFETEWAQTMLPHTAPLGLYW*NRWYS 42
Query: 266 PL*YMGALGSLIQ 228
PL*Y G GSLIQ
Sbjct: 41 PL*YKGPFGSLIQ 3
Score = 37.7 bits (76), Expect(2) = 5e-043
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 493 NYQVQNVAYPKNVSDPLLREW 555
N Q+QN A P N SDP LREW
Sbjct: 262 NRQIQNYAVPANSSDPYLREW 324
Score = 28.1 bits (55), Expect(2) = 4e-025
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1 / -1
Query: 557 THSRSSGSDTFFGYATFW 504
+HSR GSD F G A FW
Sbjct: 326 SHSRRYGSDEFAGTA*FW 273
>gb|BU878522.1|BU878522 V048D07 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 701
Score = 66.1 bits (138), Expect(4) = 8e-040
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / +3
Query: 1030 YDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
Y K RR+LWGW ESD+ DV KGWA +Q IPRTV LD
Sbjct: 3 YGRGKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVLD 125
Score = 64.8 bits (135), Expect(4) = 8e-040
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +1 / +3
Query: 1609 KISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVF 1737
K+S+R L+D S++ESF GG+TCI SRVYP+ AI ARL++F
Sbjct: 564 KLSVRILVDHSIIESFAQGGRTCITSRVYPTRAIYGSARLFLF 692
Score = 54.7 bits (113), Expect(4) = 8e-040
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +1 / +3
Query: 1156 SGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSAL 1326
+G LLQWP+EEVE+LR KS N +KAG V + Q D+ FE+ A+
Sbjct: 132 TGSNLLQWPVEEVESLRLKSKNFNNIEVKAGSAVPLELDGATQLDIVAEFELDRKAI 302
Score = 35.9 bits (72), Expect(4) = 8e-040
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1 / +3
Query: 1393 ADVRGGVGPFGLWVLASANRKERTAVFFRVFK 1488
A RG +GPFGL VLA + E T V+F V K
Sbjct: 354 ASHRGALGPFGLLVLADDDLTEYTPVYFFVAK 449
>gb|DN493003.1|DN493003 X051B06.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X051B06 3', mRNA sequence
Length = 780
Score = 120 bits (257), Expect(2) = 8e-035
Identities = 48/99 (48%), Positives = 66/99 (66%)
Frame = +1 / -2
Query: 1510 VVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSR 1689
VVLMC+D ++S+ + + T+ F+D D ISLRSLID S++ESFG G+ CI +R
Sbjct: 641 VVLMCSDQSRSALRDEVDKTTYGAFIDIDPQRENISLRSLIDHSIIESFGGEGRACITNR 462
Query: 1690 VYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 1806
VYP LAI ++A L++FNNG V +S L AW M K +N
Sbjct: 461 VYPKLAIHEEAHLFIFNNGTLSVTISSLNAWSMNKAQIN 345
Score = 48.3 bits (99), Expect(2) = 8e-035
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +1 / -2
Query: 1369 ERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
++L A ++G +GPFGL LA+ + E+TA+FFR+FK G
Sbjct: 776 QQLWSDANASIKGRLGPFGLLTLATKDLTEQTAIFFRIFKGLKG 645
>gb|CA933245.1|CA933245 MTU5CS.P5.E03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 570
Score = 77.1 bits (162), Expect(4) = 5e-034
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWR 639
QVQN+ YP + DPLL +WVK S NPV+VP GI A FRDPTTAW+
Sbjct: 91 QVQNLVYPADHDDPLLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 231
Score = 57.0 bits (118), Expect(4) = 5e-034
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 436 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 555
Score = 40.5 bits (82), Expect(4) = 5e-034
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / +1
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DFYPVSK G
Sbjct: 361 TGMWECVDFYPVSKTG 408
Score = 34.1 bits (68), Expect(4) = 5e-034
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / +1
Query: 400 DRYGCWSGSATVLPDG 447
D+ G W+GSAT+LPDG
Sbjct: 1 DKNGVWTGSATILPDG 48
>gb|CA933512.1|CA933512 MTU5CS.P9.A07 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 569
Score = 77.1 bits (162), Expect(4) = 5e-034
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +1 / -1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWR 639
+VQN+AYP + DPLL +WVK S NPV+VP GI A FRDPTTAW+
Sbjct: 479 RVQNLAYPADHDDPLLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 339
Score = 57.0 bits (118), Expect(4) = 5e-034
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / -1
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 134 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 15
Score = 40.5 bits (82), Expect(4) = 5e-034
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / -1
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DFYPVSK G
Sbjct: 209 TGMWECVDFYPVSKTG 162
Score = 34.1 bits (68), Expect(4) = 5e-034
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / -1
Query: 400 DRYGCWSGSATVLPDG 447
D+ G W+GSAT+LPDG
Sbjct: 569 DKNGVWTGSATILPDG 522
>gb|BI128034.1|BI128034 G070P01Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 519
Score = 100 bits (214), Expect(3) = 1e-033
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = +1 / +3
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
+RYDYG FYASKTFYD +K RR+LWGW ESD+ DV KGWA +Q IPRTV LD
Sbjct: 51 IRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVLD 215
Score = 53.3 bits (110), Expect(3) = 1e-033
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +1 / +3
Query: 1156 SGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSAL 1326
+G LLQWP+EEVE+LR K + N +KAG V + Q D+ FE+ A+
Sbjct: 222 TGSNLLQWPVEEVESLRLKGKSFNNIEVKAGSVVPLVLDGATQLDIVAEFELDRKAI 392
Score = 29.0 bits (57), Expect(3) = 1e-033
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1 / +3
Query: 1393 ADVRGGVGPFGLWVLASANRKERT 1464
A RG +GPFGL VLA + E T
Sbjct: 444 ASHRGALGPFGLLVLADDDLSEYT 515
>gb|CK106113.1|CK106113 UA54DPF07.5pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA54DPF07 5', mRNA sequence
Length = 437
Score = 95.5 bits (202), Expect(2) = 1e-031
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +1 / +2
Query: 181 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGA 306
VN + RTGYHFQP +NWINDPNAPMYYKG YH FYQYNPK A
Sbjct: 203 VNQVHRTGYHFQPLRNWINDPNAPMYYKGLYHLFYQYNPKAA 328
Score = 62.9 bits (131), Expect(2) = 1e-031
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1 / +3
Query: 295 PKGAVWGNIVWAHSVSRDLINWVALEPAL 381
PK VWGNIVWAHSVS+DLINW +LEPA+
Sbjct: 318 PKLPVWGNIVWAHSVSKDLINWESLEPAI 404
>gb|CA932912.1|CA932912 MTU5CS.P1.B01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 535
Score = 79.0 bits (166), Expect(3) = 4e-030
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1 / -3
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWR 639
QVQN+AYP + DPLL +WVK S NPV+VP GI A FRDPTTAW+
Sbjct: 479 QVQNLAYPADHDDPLLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 339
Score = 57.0 bits (118), Expect(3) = 4e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / -3
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 134 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 15
Score = 40.5 bits (82), Expect(3) = 4e-030
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / -3
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DFYPVSK G
Sbjct: 209 TGMWECVDFYPVSKTG 162
>gb|BP923506.1|BP923506 BP923506 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-020_J03.f 5', mRNA sequence
Length = 447
Score = 57.0 bits (118), Expect(3) = 7e-023
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 307 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 426
Score = 53.8 bits (111), Expect(3) = 7e-023
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 541 LLREWVKPSHNPVIVPEGGINATQFRDPTTAWR 639
LL +WVK S NPV VP GI A FRDPTTAW+
Sbjct: 3 LLLKWVKYSGNPV*VPPPGIGAKDFRDPTTAWK 101
Score = 40.5 bits (82), Expect(3) = 7e-023
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1 / +1
Query: 775 TGMWECPDFYPVSKGG 822
TGMWEC DFYPVSK G
Sbjct: 232 TGMWECVDFYPVSKTG 279
>gb|CK095793.1|CK095793 UA28DPE12.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA28DPE12 3', mRNA sequence
Length = 564
Score = 83.1 bits (175), Expect(2) = 1e-022
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = +1 / -2
Query: 1633 DRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 1806
D SV+ESFGA G+ I SRVYP++A+ + A LYVFNNG + V L AW M PVMN
Sbjct: 242 DHSVIESFGARGRIAISSRVYPTIAVSEKAHLYVFNNGSETITVENLNAWSMNLPVMN 69
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1 / -1
Query: 1375 LCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
+C + + GG+GPFGL LAS N +E T VFF+VF+ A
Sbjct: 495 MCPKRVSKAPGGLGPFGLLTLASENLEEFTPVFFKVFRAA 376
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 771,381,801
Number of Sequences: 369679
Number of extensions: 10278782
Number of successful extensions: 62530
Number of sequences better than 1.0e-020: 32
length of database: 67,802,888
effective HSP length: 55
effective length of database: 47,470,543
effective search space used: 29431736660
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)