TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455820.2.1
(1312 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT495408.1|DT495408 WS01120.BR_G03 PT-P-FL-A-2 Populus t... 500 e-140
gb|DT526512.1|DT526512 WS02048.C21_D21 PTxN-IB-N-A-11 Popul... 431 e-120
gb|BU881394.1|BU881394 UM62TB05 Populus flower cDNA library... 375 e-103
gb|CV246021.1|CV246021 WS0111.B21_A11 PT-P-FL-A-2 Populus t... 347 1e-095
gb|CV248344.1|CV248344 WS01120.B21_G03 PT-P-FL-A-2 Populus ... 329 2e-089
gb|DT493322.1|DT493322 WS0111.BR_A11 PT-P-FL-A-2 Populus tr... 313 1e-084
gb|CF236403.1|CF236403 PtaJXT2D1D0107 Poplar cDNA library f... 224 1e-057
gb|DT517796.1|DT517796 WS02435.B21_F07 PTxD-ICC-N-A-14 Popu... 219 4e-056
gb|BU866140.1|BU866140 S063B06 Populus imbibed seed cDNA li... 204 1e-051
gb|CN522673.1|CN522673 GQ0124.B3_M18 GQ012 Populus trichoca... 199 2e-050
gb|BU864869.1|BU864869 S046A03 Populus imbibed seed cDNA li... 175 5e-043
gb|BU861358.1|BU861358 S001B09 Populus imbibed seed cDNA li... 174 1e-042
gb|BU828048.1|BU828048 K015P22P Populus apical shoot cDNA l... 153 2e-042
gb|CN520588.1|CN520588 GQ0105.B3_E10 GQ010 Populus trichoca... 160 2e-038
gb|AJ780911.1|AJ780911 AJ780911 Populus euphratica leaf 3-6... 154 1e-036
gb|DV464349.1|DV464349 MTUNUL1.P26.D03 NUL Populus fremonti... 150 1e-035
gb|BP934641.1|BP934641 BP934641 full-length enriched poplar... 150 2e-035
gb|BU835353.1|BU835353 T072G12 Populus apical shoot cDNA li... 130 2e-029
gb|BP931986.1|BP931986 BP931986 full-length enriched poplar... 130 2e-029
gb|BU866865.1|BU866865 S071F07 Populus imbibed seed cDNA li... 128 6e-029
>gb|DT495408.1|DT495408 WS01120.BR_G03 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01120_G03
5', mRNA sequence
Length = 904
Score = 500 bits (1085), Expect = e-140
Identities = 186/256 (72%), Positives = 219/256 (85%)
Frame = -3 / +3
Query: 1121 SAIDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTS 942
S I+S W LI +F++FQLA + +F LHE++FFLSG+P + ER G KYKIQ K+NT
Sbjct: 126 SLIESCWLYLITHFSDFQLACLGSFFLHESIFFLSGIPFIYLERAGWLKKYKIQMKNNTP 305
Query: 941 AYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFI 762
A Q +C++RL+LYH VNLPVM+ SYP F+ MG++SSLP P W+V+++Q+ FYF+LEDFI
Sbjct: 306 ASQEKCIIRLLLYHFGVNLPVMLASYPVFRHMGMQSSLPFPSWNVILTQITFYFILEDFI 485
Query: 761 FYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFT 582
FYWGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPHL T
Sbjct: 486 FYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLLT 665
Query: 581 LWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMD 402
LWLWMVLRVLETVEAH GYHFPWS SNFLPLYGG+DFHDYHHR+LYTKSGNY+STF YMD
Sbjct: 666 LWLWMVLRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFTYMD 845
Query: 401 WLFGTDKDYRKAKTIE 354
W+FGTDK YRK + E
Sbjct: 846 WVFGTDKGYRKLQAFE 893
Score = 206 bits (444), Expect(2) = 5e-068
Identities = 93/131 (70%), Positives = 101/131 (77%)
Frame = +1 / -1
Query: 382 LSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*ASTVSKTL 561
LSVPN QSM* V+ *FPD VYS R*W*S KS PPY G+K + LHGK**P ASTVS+TL
Sbjct: 865 LSVPNTQSM*VKVDE*FPDLVYSNR*W*S*KSAPPYKGKKLERLHGK**PQCASTVSRTL 686
Query: 562 NTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCN 741
+TIH+H+V R GPV AGP A PRN ISAG AYS+V P GVAYS TL TCLYSHFVC
Sbjct: 685 STIHNHKVSRWGPVMAGPIMVAKPRNSISAG*AYSEVNPNGVAYS**TLCTCLYSHFVCK 506
Query: 742 ALCPQ*NIKSS 774
CPQ*NIKSS
Sbjct: 505 IRCPQ*NIKSS 473
Score = 166 bits (358), Expect = 2e-040
Identities = 84/205 (40%), Positives = 121/205 (59%)
Frame = +3 / -3
Query: 351 LLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQRQEI*WAPWEVIA 530
+L L L++ + E PVHV + +V +Q VMVVM++ +IQR E+ APWE+I
Sbjct: 896 ILKCLQLSVTFIGTEYPVHVGESR*VVSRFSIQQPVMVVMKISTSIQR*EVGEAPWEMIT 717
Query: 531 AVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGCGVLMVDAV 710
+ FN LQ+P +HP PQ ++M S RTNN +++EQ FS V IFR *+K C + M++ V
Sbjct: 716 TMCFNRLQDP*YHP*PQSKQMGPSDGRTNNGSKAKEQYFSRVSIFRS*SKWCSIFMMNTV 537
Query: 711 NVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKRAPETHEFEGRIRENHDRQV 890
++ V PF + P+ P+EYKI +D+VE LR N P + K H E RI H+ V
Sbjct: 536 HMLVQPFCV*NPMSPVEYKIFQDEVECYLR*NYIPGREWKTTLHAHVSEDRIGGQHNW*V 357
Query: 891 HTYMVENEAQDTSVLVSRGVALLLD 965
+T M+ A +T +L R V LD
Sbjct: 356 NTKMI*K*ANNTFLLRCRSVVFHLD 282
Score = 99.1 bits (210), Expect(2) = 1e-034
Identities = 45/114 (39%), Positives = 66/114 (57%)
Frame = -2 / +2
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
+VQ+P+E+QH C+ ++M +P + C P + L+SCLQ HG + SS L +
Sbjct: 272 KVQNPDEKQHSCISREMYYSPTFISFWC*PTSYAGLLSCLQTHGHAK*SSIPVLECNSNA 451
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVP 634
+ LL P FYILLG ++MA+Q +Q *+ +T+W N IC P *N VP
Sbjct: 452 DNILLHPGRFYILLGTSDFTHKMAVQACAQCSS*ICYTIWINF*ICSPC*NTVP 613
Score = 73.0 bits (153), Expect(2) = 5e-068
Identities = 40/103 (38%), Positives = 54/103 (52%)
Frame = +1 / -1
Query: 814 QCGKGRELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKSPKR 993
Q G GR L PM LK G E +TGR T + RR H A VL F WILY P
Sbjct: 433 QDGNGRLLCMPMCLKTG*EASITGRLTPK*YKSRRIIHFS*DAGVLFFIWILYFFSHPAL 254
Query: 994 SKRREGRPERKKTVSWSRKVTTVASWNSVKLAIRSCHAESMAD 1122
S+ +G P++KK +S +K+ A+ S+K I+ +SM +
Sbjct: 253 SRYMKGIPDKKKMLS*RKKLPRHAN*KSLKCVIKYSQQDSMRE 125
Score = 73.0 bits (153), Expect(2) = 7e-021
Identities = 43/113 (38%), Positives = 53/113 (46%)
Frame = +2 / -2
Query: 635 GTKFQLGGHIPMLNQRVWRTHGGRCERVCIAISYAMPCAPNRI*NPQGQSRKELEIQQPT 814
GT FQ G HI L Q V H C C AI P+RI*N G SR ++ +
Sbjct: 612 GTVFQQGEHIQKLIQMV*HIHDEHCAHACTAILCVKSDVPSRI*NLPG*SRMLSALELHS 433
Query: 815 NVAKEESS*DP*I*RQDTRKS*QAGSHIHGRE*GARHICFGKQRCCSSSGSCT 973
E+ P +*RQD R +* G H + + G +I Q CC SSG CT
Sbjct: 432 RTGMEDYFACPCV*RQDRRPA*LVG*HQNDIKVGE*YISLEMQECCFSSGFCT 274
Score = 68.4 bits (143), Expect(2) = 1e-034
Identities = 33/76 (43%), Positives = 38/76 (50%)
Frame = -1 / +1
Query: 580 CGCGWC*GFWRQLKLTAAITSHGAHQISCRCMAARTSMTTITVCCTQSQGTMPQHLFTWT 401
CG GW *G WR+LK I SHGA S CM MTTIT CC + T TWT
Sbjct: 667 CGYGWY*GSWRRLKHIVVIISHGASPTSYLCMEVLIFMTTITGCCILNLETTHLLSPTWT 846
Query: 400 GCSARTRIIARQRPLR 353
G S ++ + LR
Sbjct: 847 GYSVPIKVTESCKHLR 894
Score = 48.3 bits (99), Expect(2) = 7e-021
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +2 / -2
Query: 446 TAHGDGSHGSPSRHTAAGNLMGSMGSDSRCELQLSPKPSTPSTAT 580
TA GDGSH + HT + GSMG+D+ LQ SP P PS T
Sbjct: 801 TATGDGSHENQHLHTKVRSWRGSMGNDNHNVLQPSPGPLVPSITT 667
>gb|DT526512.1|DT526512 WS02048.C21_D21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02048_D21 3', mRNA sequence
Length = 932
Score = 431 bits (935), Expect = e-120
Identities = 158/211 (74%), Positives = 184/211 (87%)
Frame = -3 / -1
Query: 968 KIQKKSNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVL 789
K Q K+N A Q +C++RL+LYH VNLPVM+ SYP F+ MG++SSLP P W+V+++Q+
Sbjct: 929 KFQMKNNIPASQEKCIIRLLLYHFGVNLPVMLASYPVFRHMGMQSSLPFPSWNVILTQIT 750
Query: 788 FYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGP 609
FYF+LEDFIFYWGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GP
Sbjct: 749 FYFILEDFIFYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGP 570
Query: 608 ALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGN 429
A+TGPHL TLWLWMVLRVLETVEAH GYHFPWS SNFLPLYGG+DFHDYHHR+LYTKSGN
Sbjct: 569 AITGPHLLTLWLWMVLRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGN 390
Query: 428 YASTFVYMDWLFGTDKDYRKAKTIEEKEGKN 336
Y+STF YMDW+FGTDK YRK + ++ +N
Sbjct: 389 YSSTFTYMDWIFGTDKGYRKLQALKNAGVEN 297
Score = 204 bits (441), Expect(2) = 1e-057
Identities = 93/131 (70%), Positives = 101/131 (77%)
Frame = +1 / +1
Query: 382 LSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*ASTVSKTL 561
LSVPN QSM* V+ *FPD VYS R*W*S KS PPY G+K + LHGK**P ASTVS+TL
Sbjct: 343 LSVPNIQSM*VKVDE*FPDLVYSNR*W*S*KSAPPYKGKKLERLHGK**PQCASTVSRTL 522
Query: 562 NTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCN 741
+TIH+H+V R GPV AGP A PRN ISAG AYS+V P GVAYS TL TCLYSHFVC
Sbjct: 523 STIHNHKVSRWGPVMAGPIMVAKPRNSISAG*AYSEVNPNGVAYS**TLCTCLYSHFVCK 702
Query: 742 ALCPQ*NIKSS 774
CPQ*NIKSS
Sbjct: 703 IRCPQ*NIKSS 735
Score = 166 bits (358), Expect = 2e-040
Identities = 85/210 (40%), Positives = 123/210 (58%)
Frame = +3 / +3
Query: 336 IFPFFLLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQRQEI*WAP 515
IF +L L L++ + E PVHV + +V +Q VMVVM++ +IQR E+ AP
Sbjct: 297 IFHSSILQCLQLSVTFIGTEYPVHVGESR*VVSRFSIQQPVMVVMKISTSIQR*EVGEAP 476
Query: 516 WEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGCGVL 695
WE+I + FN LQ+P +HP PQ ++M S RTNN +++EQ FS V IFR *+K C +
Sbjct: 477 WEMITTMCFNRLQDP*YHP*PQSKQMGPSDGRTNNGSKAKEQYFSRVSIFRS*SKWCSIF 656
Query: 696 MVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKRAPETHEFEGRIREN 875
M++ V++ V PF + P+ P+EYKI +D+VE LR N P + K H E RI
Sbjct: 657 MMNTVHMLVQPFCV*NPMSPVEYKIFQDEVECYLR*NYIPGREWKTTLHAHVSEDRIGGQ 836
Query: 876 HDRQVHTYMVENEAQDTSVLVSRGVALLLD 965
H+ V+T M+ A +T +L R V L+
Sbjct: 837 HNW*VNTKMI*K*ANNTFLLRCRNVVFHLE 926
Score = 94.1 bits (199), Expect(2) = 1e-032
Identities = 43/110 (39%), Positives = 62/110 (56%)
Frame = -2 / -3
Query: 963 PEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCISSSFL 784
P+E+QH C+ ++M +P + C P + L+SCLQ HG + SS L + + L
Sbjct: 924 PDEKQHSCISREMYYSPTFISFWC*PTSYAGLLSCLQTHGHAK*SSIPVLECNSNADNIL 745
Query: 783 LCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVP 634
L P FYILLG ++MA+Q +Q *+ +T+W N IC P *N VP
Sbjct: 744 LHPGRFYILLGTSDFTHKMAVQACAQCSS*ICYTIWINF*ICSPC*NTVP 595
Score = 67.0 bits (140), Expect(2) = 1e-032
Identities = 31/68 (45%), Positives = 35/68 (51%)
Frame = -1 / -2
Query: 580 CGCGWC*GFWRQLKLTAAITSHGAHQISCRCMAARTSMTTITVCCTQSQGTMPQHLFTWT 401
CG GW *G WR+LK I SHGA S CM MTTIT CC + T TWT
Sbjct: 541 CGYGWY*GSWRRLKHIVVIISHGASPTSYLCMEVLIFMTTITGCCILNLETTHLLSPTWT 362
Query: 400 GCSARTRI 377
G S ++
Sbjct: 361 GYSVPIKV 338
Score = 39.6 bits (80), Expect(2) = 1e-057
Identities = 22/50 (44%), Positives = 25/50 (50%)
Frame = +1 / +1
Query: 814 QCGKGRELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFW 963
Q G GR L PM LK G E +TGR T + RR H A +L F W
Sbjct: 775 QDGNGRLLCMPMCLKTG*EASITGRLTPK*YKSRRIIHFS*DAGMLFFIW 924
>gb|BU881394.1|BU881394 UM62TB05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 559
Score = 375 bits (813), Expect = e-103
Identities = 137/176 (77%), Positives = 155/176 (88%)
Frame = -3 / +3
Query: 863 PAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYAT 684
P F+ MG++SSLP P W V++ Q+ FYF+LEDFIFYWGHR LHTKWLYKHVHS+HHEYAT
Sbjct: 3 PVFRHMGMQSSLPFPSWKVILMQITFYFILEDFIFYWGHRFLHTKWLYKHVHSIHHEYAT 182
Query: 683 PFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPS 504
PFGLTSEYAHPAEILFLGFA +VGPA+TGPHL TLWLWMVLRVLETVEAH GYHFPWS S
Sbjct: 183 PFGLTSEYAHPAEILFLGFATIVGPAITGPHLVTLWLWMVLRVLETVEAHCGYHFPWSLS 362
Query: 503 NFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEKEGKN 336
NFLPLYGG+DFHDYHHR+LYTKSGNY+STF YMDW+ GTDK YRK + ++ +N
Sbjct: 363 NFLPLYGGADFHDYHHRLLYTKSGNYSSTFTYMDWVXGTDKGYRKLQALKNAGVEN 530
Score = 202 bits (436), Expect = 4e-051
Identities = 91/131 (69%), Positives = 99/131 (75%)
Frame = +1 / -1
Query: 382 LSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*ASTVSKTL 561
LSVP QSM V+ *FPD VYS R*W*S KS PPY G+K + L GK**P ASTVS+TL
Sbjct: 484 LSVPXTQSMYVKVDE*FPDLVYSKR*W*S*KSAPPYKGKKLERLQGK**PQCASTVSRTL 305
Query: 562 NTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCN 741
+TIH+H+V R GPV AGPT A PRN ISAG AYS+V P GVAYS W L TCLYSHFVC
Sbjct: 304 STIHNHKVTRWGPVMAGPTIVAKPRNSISAG*AYSEVNPNGVAYS*WILCTCLYSHFVCK 125
Query: 742 ALCPQ*NIKSS 774
CPQ*NIKSS
Sbjct: 124 NRCPQ*NIKSS 92
Score = 144 bits (308), Expect = 2e-033
Identities = 74/176 (42%), Positives = 101/176 (57%)
Frame = +3 / -3
Query: 336 IFPFFLLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQRQEI*WAP 515
IF +L L L++ + PVHV + +V +Q VMVVM++ +IQR +I AP
Sbjct: 530 IFHSSILQCLQLSVTFIGTXYPVHVRESR*VVSRFSIQQAVMVVMKISTSIQR*KIGEAP 351
Query: 516 WEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGCGVL 695
E+I + FNCLQ+P +HP PQ +M A RTNN +++EQ S V IF *+K C +
Sbjct: 350 GEMITTMCFNCLQDP*YHP*PQSYQMGACDGRTNNSSKTKEQYLSRVSIFGS*SKWCSIF 171
Query: 696 MVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKRAPETHEFEGR 863
M+D V++ V PF M PV PIEYKI +D+VE L N P + K H E R
Sbjct: 170 MMDTVHMLVQPFCM*EPVSPIEYKIFQDEVECYLH*NYFPGREWKTTLHAHVSEDR 3
Score = 73.9 bits (155), Expect(2) = 9e-026
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = -2 / +2
Query: 864 SCLQIHGSQELSSFATLVGCCISSSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRH 685
SCLQ HG + SS L + + LL P FYILLG + Y+MA+Q +Q P *+ +
Sbjct: 2 SCLQTHGHAK*SSIPVLESNSNADNILLHPGRFYILLGTPVLTYKMAVQACAQYPS*ICY 181
Query: 684 TLWFNIGICPPS*NFVP 634
T+W N IC P *+ VP
Sbjct: 182 TIWINFRICSPC*DTVP 232
Score = 63.8 bits (133), Expect(2) = 9e-026
Identities = 30/61 (49%), Positives = 31/61 (50%)
Frame = -1 / +1
Query: 580 CGCGWC*GFWRQLKLTAAITSHGAHQISCRCMAARTSMTTITVCCTQSQGTMPQHLFTWT 401
CG GW *G WRQLK I S GA I CM MTTIT CC + T TWT
Sbjct: 286 CGYGWY*GSWRQLKHIVVIISPGASPIFYLCMEVLIFMTTITACCILNLETTHLLSRTWT 465
Query: 400 G 398
G
Sbjct: 466 G 468
Score = 62.9 bits (131), Expect(2) = 8e-022
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -2 / +2
Query: 579 VAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKVRELCLNICLHGL 400
V +DG +G GDS*S+ LS P+EP++F VWR *LPSP AV+ + +L + +HGL
Sbjct: 287 VVMDGTKGPGDS*STLWLSFPLEPLQFFTFVWRC*FS*LPSPLAVY*IWKLLIYFHVHGL 466
Score = 61.6 bits (128), Expect(2) = 8e-022
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = -1 / +1
Query: 865 ILPSNSWVSGALFLCHIGRLLYLKFFSTLSLRILYSIGGTGHCIRNGYTNTFTASTMSTP 686
IL S++W +F G+ + ST S +ILYSIG TG I+NG T+ T S M+
Sbjct: 1 ILSSDTWACKVVFHSRPGK*F*CR*HSTSSWKILYSIGDTGSYIQNGCTSMCTVSIMNML 180
Query: 685 HPLV*HRNMPTQLKFCS 635
H L * NM T L++CS
Sbjct: 181 HHLD*LPNMLTLLRYCS 231
>gb|CV246021.1|CV246021 WS0111.B21_A11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0111_A11 3', mRNA sequence
Length = 729
Score = 347 bits (753), Expect(2) = 1e-095
Identities = 127/156 (81%), Positives = 142/156 (91%)
Frame = -3 / -1
Query: 803 VSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA 624
++Q+ FYF+LEDFIFYWGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA
Sbjct: 693 LTQITFYFILEDFIFYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA 514
Query: 623 PVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLY 444
++GPA+TGPHL TLWLWMVLRVLETVEAH GYHFPWS SNFLPLYGG+DFHDYHHR+LY
Sbjct: 513 TIIGPAITGPHLLTLWLWMVLRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLY 334
Query: 443 TKSGNYASTFVYMDWLFGTDKDYRKAKTIEEKEGKN 336
TKSGNY+STF YMDW+FGTDK YRK + ++ +N
Sbjct: 333 TKSGNYSSTFTYMDWVFGTDKGYRKLQALKNAGVEN 226
Score = 206 bits (444), Expect = 3e-052
Identities = 93/131 (70%), Positives = 101/131 (77%)
Frame = +1 / +2
Query: 382 LSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*ASTVSKTL 561
LSVPN QSM* V+ *FPD VYS R*W*S KS PPY G+K + LHGK**P ASTVS+TL
Sbjct: 272 LSVPNTQSM*VKVDE*FPDLVYSNR*W*S*KSAPPYKGKKLERLHGK**PQCASTVSRTL 451
Query: 562 NTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCN 741
+TIH+H+V R GPV AGP A PRN ISAG AYS+V P GVAYS TL TCLYSHFVC
Sbjct: 452 STIHNHKVSRWGPVMAGPIMVAKPRNSISAG*AYSEVNPNGVAYS**TLCTCLYSHFVCK 631
Query: 742 ALCPQ*NIKSS 774
CPQ*NIKSS
Sbjct: 632 IRCPQ*NIKSS 664
Score = 148 bits (317), Expect = 9e-035
Identities = 71/164 (43%), Positives = 102/164 (62%)
Frame = +3 / +1
Query: 309 LLSSFHNLQIFPFFLLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAI 488
LLS IF +L L L++ + E PVHV + +V +Q VMVVM++ +I
Sbjct: 199 LLSLHLLAAIFHSSILQCLQLSVTFIGTEYPVHVGESR*VVSRFSIQQPVMVVMKISTSI 378
Query: 489 QRQEI*WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFR 668
QR E+ APWE+I + FN LQ+P +HP PQ ++M S RTNN +++EQ FS V IFR
Sbjct: 379 QR*EVGEAPWEMITTMCFNRLQDP*YHP*PQSKQMGPSDGRTNNGSKAKEQYFSRVSIFR 558
Query: 669 C*TKGCGVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLR 800
*+K C + M++ V++ V PF + P+ P+EYKI +D+VE LR
Sbjct: 559 S*SKWCSIFMMNTVHMLVQPFCV*NPMSPVEYKIFQDEVECYLR 690
Score = 67.0 bits (140), Expect(2) = 5e-021
Identities = 31/68 (45%), Positives = 35/68 (51%)
Frame = -1 / -2
Query: 580 CGCGWC*GFWRQLKLTAAITSHGAHQISCRCMAARTSMTTITVCCTQSQGTMPQHLFTWT 401
CG GW *G WR+LK I SHGA S CM MTTIT CC + T TWT
Sbjct: 470 CGYGWY*GSWRRLKHIVVIISHGASPTSYLCMEVLIFMTTITGCCILNLETTHLLSPTWT 291
Query: 400 GCSARTRI 377
G S ++
Sbjct: 290 GYSVPIKV 267
Score = 54.7 bits (113), Expect(2) = 5e-021
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = -2 / -3
Query: 798 SSSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVP 634
+ + LL P FYILLG ++MA+Q +Q *+ +T+W N IC P *N VP
Sbjct: 688 ADNILLHPGRFYILLGTSDFTHKMAVQACAQCSS*ICYTIWINF*ICSPC*NTVP 524
Score = 23.5 bits (45), Expect(2) = 1e-095
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 839 RSSLPLPHWSVV 804
+SSLP P W+V+
Sbjct: 728 QSSLPFPSWNVI 693
>gb|CV248344.1|CV248344 WS01120.B21_G03 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_G03 3', mRNA sequence
Length = 698
Score = 329 bits (713), Expect = 2e-089
Identities = 121/145 (83%), Positives = 132/145 (91%)
Frame = -3 / -3
Query: 770 DFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPH 591
DFIFYWGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+TGPH
Sbjct: 696 DFIFYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPH 517
Query: 590 LFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFV 411
L TLWLWMVLRVLETVEAH GYHFPWS SNFLPLYGG+DFHDYHHR+LYTKSGNY+STF
Sbjct: 516 LLTLWLWMVLRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFT 337
Query: 410 YMDWLFGTDKDYRKAKTIEEKEGKN 336
YMDW+FGTDK YRK + ++ +N
Sbjct: 336 YMDWVFGTDKGYRKLQALKNAGVEN 262
Score = 204 bits (440), Expect = 1e-051
Identities = 92/130 (70%), Positives = 100/130 (76%)
Frame = +1 / +2
Query: 382 LSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGRKFDGLHGK**PL*ASTVSKTL 561
LSVPN QSM* V+ *FPD VYS R*W*S KS PPY G+K + LHGK**P ASTVS+TL
Sbjct: 308 LSVPNTQSM*VKVDE*FPDLVYSNR*W*S*KSAPPYKGKKLERLHGK**PQCASTVSRTL 487
Query: 562 NTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCN 741
+TIH+H+V R GPV AGP A PRN ISAG AYS+V P GVAYS TL TCLYSHFVC
Sbjct: 488 STIHNHKVSRWGPVMAGPIMVAKPRNSISAG*AYSEVNPNGVAYS**TLCTCLYSHFVCK 667
Query: 742 ALCPQ*NIKS 771
CPQ*NIKS
Sbjct: 668 IRCPQ*NIKS 697
Score = 138 bits (296), Expect = 7e-032
Identities = 66/154 (42%), Positives = 95/154 (61%)
Frame = +3 / +1
Query: 309 LLSSFHNLQIFPFFLLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAI 488
LLS IF +L L L++ + E PVHV + +V +Q VMVVM++ +I
Sbjct: 235 LLSLHLLAAIFHSSILQCLQLSVTFIGTEYPVHVGESR*VVSRFSIQQPVMVVMKISTSI 414
Query: 489 QRQEI*WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFR 668
QR E+ APWE+I + FN LQ+P +HP PQ ++M S RTNN +++EQ FS V IFR
Sbjct: 415 QR*EVGEAPWEMITTMCFNRLQDP*YHP*PQSKQMGPSDGRTNNGSKAKEQYFSRVSIFR 594
Query: 669 C*TKGCGVLMVDAVNVFV*PFRMQCPVPPIEYKI 770
*+K C + M++ V++ V PF + P+ P+EYKI
Sbjct: 595 S*SKWCSIFMMNTVHMLVQPFCV*NPMSPVEYKI 696
>gb|DT493322.1|DT493322 WS0111.BR_A11 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_A11
5', mRNA sequence
Length = 542
Score = 313 bits (678), Expect = 1e-084
Identities = 117/174 (67%), Positives = 145/174 (83%)
Frame = -3 / +3
Query: 1121 SAIDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTS 942
S I+S W LI +F++FQLA + +F LHE++FFLSG+P + ER G KYKIQ K+NT
Sbjct: 21 SLIESCWLYLITHFSDFQLACLGSFFLHESIFFLSGIPFIYLERAGWLKKYKIQMKNNTP 200
Query: 941 AYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFI 762
A Q +C++RL+LYH VNLPVM+ SYP F+ MG++SSLP P W+V+++Q+ FYF+LEDFI
Sbjct: 201 ASQEKCIIRLLLYHFGVNLPVMLASYPVFRHMGMQSSLPFPSWNVILTQITFYFILEDFI 380
Query: 761 FYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALT 600
FYWGHR LHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA ++GPA+T
Sbjct: 381 FYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAIT 542
Score = 94.1 bits (199), Expect(2) = 2e-034
Identities = 42/58 (72%), Positives = 43/58 (74%)
Frame = +1 / -2
Query: 601 VRAGPTTGANPRNKISAGWAYSDVKPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSS 774
V AGP A PRN ISAG AYS+V P GVAYS TL TCLYSHFVC CPQ*NIKSS
Sbjct: 541 VMAGPIMVAKPRNSISAG*AYSEVNPNGVAYS**TLCTCLYSHFVCKIRCPQ*NIKSS 368
Score = 73.0 bits (153), Expect(2) = 2e-034
Identities = 40/103 (38%), Positives = 54/103 (52%)
Frame = +1 / -2
Query: 814 QCGKGRELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKSPKR 993
Q G GR L PM LK G E +TGR T + RR H A VL F WILY P
Sbjct: 328 QDGNGRLLCMPMCLKTG*EASITGRLTPK*YKSRRIIHFS*DAGVLFFIWILYFFSHPAL 149
Query: 994 SKRREGRPERKKTVSWSRKVTTVASWNSVKLAIRSCHAESMAD 1122
S+ +G P++KK +S +K+ A+ S+K I+ +SM +
Sbjct: 148 SRYMKGIPDKKKMLS*RKKLPRHAN*KSLKCVIKYSQQDSMRE 20
>gb|CF236403.1|CF236403 PtaJXT2D1D0107 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 224 bits (483), Expect = 1e-057
Identities = 81/161 (50%), Positives = 106/161 (65%)
Frame = -3 / +2
Query: 830 LPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHP 651
LPLP + Q+L YF++ED+ YW HR LH KW Y+ +H VHHEY P G + YAH
Sbjct: 5 LPLPSGWEIFLQLLVYFMVEDYTNYWIHRFLHGKWGYEKIHKVHHEYTAPIGFAAPYAHW 184
Query: 650 AEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDF 471
AEIL LG +GPA+ H+ T WLW+ LR +E +E HSGY+FPW+P+ ++P YGG+D+
Sbjct: 185 AEILILGIPSFLGPAMVPGHMITFWLWIALRQIEAIETHSGYNFPWTPTKYIPFYGGADY 364
Query: 470 HDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEK 348
HDYHH V N+AS F Y D ++GTDK YR K + K
Sbjct: 365 HDYHHYVGGQSQSNFASVFTYCDLIYGTDKGYRFQKKLLRK 487
>gb|DT517796.1|DT517796 WS02435.B21_F07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02435_F07 3', mRNA sequence
Length = 768
Score = 219 bits (472), Expect = 4e-056
Identities = 77/150 (51%), Positives = 102/150 (68%)
Frame = -3 / -1
Query: 797 QVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPV 618
Q+L YF++ED+ YW HR LH KW Y+ +H VHHEY P G + YAH AEIL LG
Sbjct: 747 QLLVYFMVEDYTNYWIHRFLHGKWGYEKIHKVHHEYTAPIGFAAPYAHWAEILILGIPSF 568
Query: 617 VGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTK 438
+GPA+ H+ T WLW+ LR +E +E HSGY+FPW+P+ ++P YGG+D+HDYHH V
Sbjct: 567 LGPAMVPGHMITFWLWIALRQIEAIETHSGYNFPWTPTKYIPFYGGADYHDYHHYVGGQS 388
Query: 437 SGNYASTFVYMDWLFGTDKDYRKAKTIEEK 348
N+AS F Y D+++GTDK YR K + K
Sbjct: 387 QSNFASVFTYCDFIYGTDKGYRFQKKLLRK 298
>gb|BU866140.1|BU866140 S063B06 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 753
Score = 204 bits (439), Expect = 1e-051
Identities = 74/158 (46%), Positives = 102/158 (64%)
Frame = -3 / +2
Query: 929 RCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWG 750
+C ++ + V P+ + SYP K +G+R+SL LP + Q L YF++ED+ YW
Sbjct: 278 KCYKDVMQTFIVVVGPLQVSSYPFIKLIGIRTSLSLPSGGEMFWQFLVYFLIEDYTAYWV 457
Query: 749 HRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLW 570
HR LH+ W Y+ +H VHHEY+ P G + YAH +EIL LG +GPA+ H+ T WLW
Sbjct: 458 HRLLHSDWGYEKIHHVHHEYSAPMGFAAPYAHWSEILILGMPAFLGPAVVPGHITTYWLW 637
Query: 569 MVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHH 456
VLR +E +E HSGY F WSP+ F+P YGG+ +HDYHH
Sbjct: 638 FVLRQMEAIEIHSGYDFSWSPTRFIPFYGGARYHDYHH 751
>gb|CN522673.1|CN522673 GQ0124.B3_M18 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0124_M18 5', mRNA sequence
Length = 438
Score = 199 bits (430), Expect = 2e-050
Identities = 70/144 (48%), Positives = 92/144 (63%)
Frame = -3 / +2
Query: 806 VVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGF 627
V Q++ YF+ DF YW HR LH KW Y+ +H VHHEY P G + YAH AE+L LG
Sbjct: 5 VFVQLVVYFMXXDFTNYWIHRFLHGKWXYEKIHKVHHEYTAPIGFAAPYAHWAEVLILGI 184
Query: 626 APVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVL 447
+ A+ H+ T WLW+ LR E +E HSGY FPW+P+ ++P YGG+D+HDYHH V
Sbjct: 185 PSFLXXAMVPGHMITFWLWIALRQXEAIETHSGYDFPWTPTKYIPFYGGADYHDYHHYVG 364
Query: 446 YTKSGNYASTFVYMDWLFGTDKDY 375
N+AS Y D+++GTDK Y
Sbjct: 365 GQSQSNFASVXTYCDFIYGTDKGY 436
>gb|BU864869.1|BU864869 S046A03 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 712
Score = 175 bits (377), Expect = 5e-043
Identities = 65/145 (44%), Positives = 91/145 (62%)
Frame = -3 / +2
Query: 929 RCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWG 750
+C ++ + V P+ + SYP K +G+R+SL LP + Q L YF++ED+ YW
Sbjct: 278 KCYKDVVQTFIIVVGPLQVSSYPFIKLIGIRTSLSLPSGGEMFWQFLVYFLIEDYTAYWV 457
Query: 749 HRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLW 570
HR LH+ W Y+ +H VHHEY+ P G + YAH +EIL LG +GPA+ H+ T WLW
Sbjct: 458 HRLLHSDWGYEKIHHVHHEYSAPMGFAAPYAHWSEILILGMPAFLGPAVVPGHITTYWLW 637
Query: 569 MVLRVLETVEAHSGYHFPWSPSNFL 495
VLR +E +E HSGY F WSP+ F+
Sbjct: 638 FVLRQMEAIETHSGYDFSWSPTRFI 712
>gb|BU861358.1|BU861358 S001B09 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 703
Score = 174 bits (374), Expect = 1e-042
Identities = 65/145 (44%), Positives = 91/145 (62%)
Frame = -3 / +2
Query: 929 RCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWG 750
+C ++ + V P+ + SYP K +G+R+SL LP + Q L YF++ED+ YW
Sbjct: 269 KCYKDVMQTFIVVVGPLQVSSYPFIKLIGIRTSLSLPSGGEMFWQFLVYFLIEDYTAYWV 448
Query: 749 HRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLW 570
HR LH+ W Y+ +H VHHEY+ P G + YAH +EIL LG +GPA+ H+ T WLW
Sbjct: 449 HRLLHSDWGYEKIHHVHHEYSAPMGFAAPYAHWSEILILGMPAFLGPAVVPGHITTYWLW 628
Query: 569 MVLRVLETVEAHSGYHFPWSPSNFL 495
VLR +E +E HSGY F WSP+ F+
Sbjct: 629 FVLRQMEAIEIHSGYDFSWSPTRFI 703
>gb|BU828048.1|BU828048 K015P22P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 494
Score = 153 bits (329), Expect(3) = 2e-042
Identities = 55/88 (62%), Positives = 71/88 (80%)
Frame = -3 / +1
Query: 956 KSNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFV 777
++NT A Q +C++RL+LYH VNLPVM+ SYP F+ MG++SSLP P W+V+++Q+ FYF+
Sbjct: 193 ENNTPASQEKCIIRLLLYHFGVNLPVMVASYPVFRHMGMQSSLPFPSWNVILTQITFYFI 372
Query: 776 LEDFIFYWGHRALHTKWLYKHVHSVHHE 693
LED GHR LHTKWLYKHVHSVHHE
Sbjct: 373 LEDLYSTRGHRILHTKWLYKHVHSVHHE 456
Score = 32.2 bits (64), Expect(3) = 2e-042
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / +2
Query: 692 YATPFGLTSEYA 657
YATPFGLTSEYA
Sbjct: 458 YATPFGLTSEYA 493
Score = 25.8 bits (50), Expect(3) = 2e-042
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3 / +1
Query: 1121 SAIDSAWQLLIANFTEFQLATVVTFL 1044
S I S W L +F++FQL FL
Sbjct: 25 SLIQSCWLYLTTHFSDFQLGMSWKFL 102
>gb|CN520588.1|CN520588 GQ0105.B3_E10 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_E10 5', mRNA sequence
Length = 792
Score = 160 bits (344), Expect = 2e-038
Identities = 59/131 (45%), Positives = 80/131 (61%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYP+ K +G+R+SLPLP V Q++ YF++EDF YW HR LH KW Y+ +H
Sbjct: 400 PLQLVSYPSVKMIGIRTSLPLPSGWEVFVQLVVYFMVEDFTNYWIHRFLHGKWGYEKIHK 579
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
VHHEY P G + YAH AE+L LG +GPA+ H+ T WLW+ LR E H
Sbjct: 580 VHHEYTAPIGFAAPYAHWAEVLILGXPSFLGPAMVPGHMITFWLWIALRXXEAXXXHXXX 759
Query: 524 HFPWSPSNFLP 492
P P+ ++P
Sbjct: 760 XXPXXPTKYIP 792
>gb|AJ780911.1|AJ780911 AJ780911 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900014H10F1, mRNA sequence
Length = 366
Score = 154 bits (331), Expect = 1e-036
Identities = 57/76 (75%), Positives = 65/76 (85%)
Frame = -3 / -2
Query: 563 LRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTD 384
LRVLETVEAH GYHFPWS SNFLPLYGG+DFHDYHHR+LYTKSGNY STF YMDW+FG+D
Sbjct: 365 LRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGNYLSTFTYMDWVFGSD 186
Query: 383 KDYRKAKTIEEKEGKN 336
K YRK + ++ +N
Sbjct: 185 KGYRKLQALKNAGVEN 138
>gb|DV464349.1|DV464349 MTUNUL1.P26.D03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 775
Score = 150 bits (323), Expect = 1e-035
Identities = 55/114 (48%), Positives = 75/114 (65%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYP+ K +G+R+SLPLP V Q++ YF++EDF YW HR LH KW Y+ +H
Sbjct: 433 PLQLVSYPSVKLIGIRTSLPLPSGWEVFLQLVVYFMVEDFTNYWIHRFLHGKWGYEKIHK 612
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETV 543
VHHEY P G + YAH AE+L LG +GPA+ H+ T WLW+ LR +E +
Sbjct: 613 VHHEYTAPIGFAAPYAHWAEVLILGIPSFLGPAMVPGHMMTFWLWIALRQIEAI 774
>gb|BP934641.1|BP934641 BP934641 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-067_N10.r 3', mRNA sequence
Length = 669
Score = 150 bits (322), Expect = 2e-035
Identities = 53/105 (50%), Positives = 71/105 (67%)
Frame = -3 / -2
Query: 662 YAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYG 483
YAH AEI LG +GPA+ H+ T WLW+ LR +E +E HSGY+FPW+P+ ++P YG
Sbjct: 659 YAHWAEIWILGIPSFLGPAMVPGHMITFWLWIALRQIEAIETHSGYNFPWTPTKYIPFYG 480
Query: 482 GSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEK 348
G+D+HDYHH V N+AS F Y D+++GTDK YR K + K
Sbjct: 479 GADYHDYHHYVGGQSQSNFASVFTYCDFIYGTDKGYRFQKKLLRK 345
>gb|BU835353.1|BU835353 T072G12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 705
Score = 130 bits (279), Expect = 2e-029
Identities = 49/101 (48%), Positives = 66/101 (65%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYP+ K +G+R+SLPLP V Q++ YF++EDF YW HR LH KW Y+ +H
Sbjct: 403 PLQLVSYPSVKMIGIRTSLPLPSGWEVFLQLVVYFMVEDFTNYWIHRFLHGKWGYEKIHK 582
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFT 582
VHHEY P G + YAH AE+L LG +GPA+ H+ T
Sbjct: 583 VHHEYTAPIGFAAPYAHWAEVLILGIPSFLGPAMVPGHMIT 705
>gb|BP931986.1|BP931986 BP931986 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-030_G20.r 3', mRNA sequence
Length = 601
Score = 130 bits (278), Expect = 2e-029
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = -3 / -2
Query: 611 PALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSG 432
PA+ H+ T W W+ LR +E +E HSGY+FPW+P+ ++P YGG+D+HDYHH V
Sbjct: 600 PAMVPGHMITFWFWIALRQIEAIETHSGYNFPWTPTKYIPFYGGADYHDYHHYVGGQSQS 421
Query: 431 NYASTFVYMDWLFGTDKDYRKAKTIEEK 348
N+AS F Y D+++GTDK YR K + K
Sbjct: 420 NFASVFTYCDFIYGTDKGYRFQKKLLRK 337
>gb|BU866865.1|BU866865 S071F07 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 650
Score = 128 bits (275), Expect = 6e-029
Identities = 49/118 (41%), Positives = 71/118 (60%)
Frame = -3 / +2
Query: 929 RCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWG 750
+C ++ + V P+ + SYP K +G+R+SL LP + Q L YF++ED+ YW
Sbjct: 296 KCYKDVVQTFIVVVGPLRVSSYPFIKLIGIRTSLSLPSGGEMFWQFLVYFLIEDYTAYWV 475
Query: 749 HRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
HR LH+ W Y+ +H VHHEY+ P G + YAH +EIL LG +GPA+ H+ T W
Sbjct: 476 HRLLHSDWGYEKIHHVHHEYSAPMGFAAPYAHWSEILILGMPAFLGPAVVPGHITTYW 649
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 641,348,019
Number of Sequences: 369679
Number of extensions: 9524012
Number of successful extensions: 59268
Number of sequences better than 1.0e-020: 24
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 18464392083
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)