TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440958.2.1
(791 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT476355.1|DT476355 WS01229.B21_E11 PT-GT-FL-A-3 Populus... 140 1e-048
gb|CV280707.1|CV280707 WS0137.B21_G07 PTxD-IL-FL-A-4 Populu... 139 1e-047
gb|CV280517.1|CV280517 WS0136.B21_J20 PTxD-IL-FL-A-4 Populu... 139 1e-047
gb|CK096481.1|CK096481 UB15CPH11.3pR Populus active cambium... 140 2e-047
gb|DT504273.1|DT504273 WS01312.B21_L07 PTxD-IL-FL-A-4 Popul... 135 3e-046
gb|DN490332.1|DN490332 UK116TF06.3pR Populus apical shoot c... 183 1e-045
gb|DT493173.1|DT493173 WS02553.C21_J21 PT-MB-N-A-15 Populus... 144 2e-044
gb|CV239394.1|CV239394 WS0232.B21_E06 PT-MB-A-13 Populus tr... 144 2e-044
gb|DT489174.1|DT489174 WS02538.B21_H23 PT-MB-N-A-15 Populus... 144 2e-044
gb|CV234439.1|CV234439 WS01214.B21_O21 PT-GT-FL-A-3 Populus... 144 2e-044
gb|CV235235.1|CV235235 WS01218.B21_E23 PT-GT-FL-A-3 Populus... 125 3e-044
gb|CV225757.1|CV225757 WS0162.B21_E24 PT-DX-A-7 Populus tri... 146 4e-042
gb|CV240212.1|CV240212 WS0234.B21_M02 PT-MB-A-13 Populus tr... 128 1e-039
gb|DN488662.1|DN488662 S021B06.3pR Populus imbibed seed cDN... 109 6e-039
gb|DT505641.1|DT505641 WS01811.C21_H13 PTxD-IL-N-A-9 Populu... 131 8e-039
gb|CX659487.1|CX659487 PO01031C05 Poplar SC cDNA library Po... 127 5e-037
gb|CX659497.1|CX659497 PO01031D04 Poplar SC cDNA library Po... 127 5e-037
gb|CX659511.1|CX659511 PO01031E10 Poplar SC cDNA library Po... 127 5e-037
gb|CA932779.1|CA932779 MTU5CS.P17.C10 Aspen stem cDNA Libra... 105 2e-036
gb|AJ772970.1|AJ772970 AJ772970 Populus euphratica leaf 3-6... 77 1e-035
gb|CN523142.1|CN523142 GQ015M01.B3_G24 GQ015 Populus tricho... 146 1e-034
gb|DT503437.1|DT503437 WS0136.BR_J20 PTxD-IL-FL-A-4 Populus... 139 2e-032
gb|DT503659.1|DT503659 WS0137.BR_G07 PTxD-IL-FL-A-4 Populus... 139 2e-032
gb|DN484751.1|DN484751 K015P23.3pR Populus apical shoot cDN... 119 2e-030
gb|BU878639.1|BU878639 V049F12 Populus flower cDNA library ... 133 2e-030
gb|DN502084.1|DN502084 V049F12.5pR Populus male catkins cDN... 133 2e-030
gb|CV234783.1|CV234783 WS01216.B21_E17 PT-GT-FL-A-3 Populus... 77 5e-030
gb|AJ771700.1|AJ771700 AJ771700 Populus euphratica root 3-6... 130 9e-030
gb|CK099728.1|CK099728 A082P19.5pR Hybrid aspen plasmid lib... 130 1e-029
gb|DV465820.1|DV465820 MTUNUL1.P43.E12 NUL Populus fremonti... 127 1e-028
gb|CA933451.1|CA933451 MTU5CS.P8.C02 Aspen stem cDNA Librar... 79 1e-028
gb|CA932285.1|CA932285 MTU5CS.P11.A06 Aspen stem cDNA Libra... 79 1e-028
gb|CX659723.1|CX659723 PO01013C03 Poplar SC cDNA library Po... 126 2e-028
emb|AJ698925.1| Populus deltoides x Populus maximowiczii pa... 74 3e-028
gb|BU811664.1|BU811664 UL87T2E09 Populus leaf cDNA library ... 125 4e-028
gb|BU815201.1|BU815201 N038E07 Populus bark cDNA library Po... 125 4e-028
gb|CF234075.1|CF234075 PtaJXO2C3C0305 Poplar cDNA library f... 125 4e-028
gb|CN524481.1|CN524481 GQ015M13.T3_B02 GQ015 Populus tricho... 125 4e-028
gb|CK319284.1|CK319284 X9P09a07 Populus stem seasonal libra... 125 4e-028
gb|CK319339.1|CK319339 X9P09f06 Populus stem seasonal libra... 125 4e-028
gb|CV227518.1|CV227518 WS0167.B21_G15 PT-DX-A-7 Populus tri... 125 4e-028
gb|CV231042.1|CV231042 WS0193.B21_G01 PT-DX-N-A-10 Populus ... 125 4e-028
gb|CV237447.1|CV237447 WS01227.B21_B24 PT-GT-FL-A-3 Populus... 125 4e-028
gb|CV261308.1|CV261308 WS02016.B21_G21 PTxN-IB-N-A-11 Popul... 125 4e-028
gb|CV265340.1|CV265340 WS02026.B21_P18 PTxN-IB-N-A-11 Popul... 125 4e-028
gb|CV272694.1|CV272694 WS0158.B21_G20 PTxN-IB-A-6 Populus t... 125 4e-028
gb|DT484752.1|DT484752 WS02526.B21_F05 PT-MB-N-A-15 Populus... 125 4e-028
gb|DT511606.1|DT511606 WS02416.B21_O19 PTxD-ICC-N-A-14 Popu... 125 4e-028
gb|DV466436.1|DV466436 MTUNUL1.P50.F03 NUL Populus fremonti... 125 4e-028
emb|A26486.1| Poplar pOMT1.A/pOMT1.B combined sequence 125 4e-028
gb|AF237777.1|AF237777 Populus tomentosa caffeic acid O-3-m... 125 4e-028
gb|M73431.1|POPOME Populus x generosa tissue-type leaf O-me... 125 4e-028
emb|A26484.1| Poplar pPLC4 125 4e-028
emb|X62096.1|PTLBCA P. tremuloides mRNA for lignin bispecif... 125 4e-028
gb|CK318925.1|CK318925 X9P04h05 Populus stem seasonal libra... 123 1e-027
gb|CF232044.1|CF232044 PtaJXO0005H11H1115 Poplar cDNA libra... 122 3e-027
gb|AI165359.1|AI165359 A082p19u Hybrid aspen plasmid librar... 99 3e-027
gb|CV225407.1|CV225407 WS0161.B21_E21 PT-DX-A-7 Populus tri... 122 4e-027
gb|DT524561.1|DT524561 WS02042.C21.1_P23 PTxN-IB-N-A-11 Pop... 122 4e-027
gb|CV244738.1|CV244738 WS0255.B21_H18 PT-MB-N-A-15 Populus ... 121 5e-027
gb|CV266856.1|CV266856 WS02030.B21_C15 PTxN-IB-N-A-11 Popul... 121 5e-027
gb|DT509905.1|DT509905 WS02425.BR_A24 PTxD-ICC-N-A-14 Popul... 121 5e-027
gb|DT515034.1|DT515034 WS02426.B21_H09 PTxD-ICC-N-A-14 Popu... 121 5e-027
gb|CA930181.1|CA930181 MTU2CA.P8.C04 Aspen apex cDNA Librar... 119 2e-026
gb|DT514525.1|DT514525 WS02425.B21_A24 PTxD-ICC-N-A-14 Popu... 119 2e-026
gb|CK319115.1|CK319115 X9P07a12 Populus stem seasonal libra... 118 3e-026
gb|DT510407.1|DT510407 WS02426.BR_H09 PTxD-ICC-N-A-14 Popul... 118 5e-026
gb|CV246992.1|CV246992 WS01116.B21_K20 PT-P-FL-A-2 Populus ... 117 9e-026
gb|CK319196.1|CK319196 X9P08a02 Populus stem seasonal libra... 116 1e-025
gb|DN492141.1|DN492141 V049F12.3pR Populus male catkins cDN... 116 2e-025
gb|DV465073.1|DV465073 MTUNUL1.P34.F07 NUL Populus fremonti... 115 3e-025
gb|AI165702.1|AI165702 A088p24u Hybrid aspen plasmid librar... 115 4e-025
gb|CV242812.1|CV242812 WS02516.B21.1_B15 PT-MB-N-A-15 Popul... 80 5e-025
gb|CF232528.1|CF232528 PtaJXO0011E8E0810 Poplar cDNA librar... 113 1e-024
gb|CK088971.1|CK088971 A082P19.3pR Hybrid aspen plasmid lib... 64 2e-024
gb|AJ774023.1|AJ774023 AJ774023 Populus euphratica shoot 3-... 111 8e-024
gb|DT502488.1|DT502488 WS0133.BR_C08 PTxD-IL-FL-A-4 Populus... 110 1e-023
gb|DT490728.1|DT490728 WS02545.B21_M12 PT-MB-N-A-15 Populus... 92 4e-023
gb|CK319108.1|CK319108 X9P07a02 Populus stem seasonal libra... 97 4e-023
gb|CV255064.1|CV255064 WS02411.B21_P09 PTxD-ICC-N-A-14 Popu... 80 3e-022
gb|BU872046.1|BU872046 Q038E02 Populus flower cDNA library ... 105 3e-022
gb|CK319716.1|CK319716 B9SP10h05 Populus stem seasonal libr... 102 2e-021
>gb|DT476355.1|DT476355 WS01229.B21_E11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_E11 3', mRNA sequence
Length = 887
Score = 140 bits (300), Expect(3) = 1e-048
Identities = 53/95 (55%), Positives = 74/95 (77%)
Frame = +3 / -2
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+SSLVDVGGG G + I +AFPH++C+VLDLP+VV+ +KYVAGDMF++V
Sbjct: 739 IFEGVSSLVDVGGGIGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKYVAGDMFQAV 560
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
A+A+ LK ++H+W D DCVKILK CK+AI ++G
Sbjct: 559 PPAEAILLKWMLHNWSDEDCVKILKRCKQAIMSKG 455
Score = 93.2 bits (197), Expect(2) = 4e-021
Identities = 47/90 (52%), Positives = 54/90 (60%)
Frame = -2 / +3
Query: 307 MAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSSTL 128
+A L SI TQS+S Q C I L K ASA T N+SPATYF + TT+GRSST+
Sbjct: 468 IACLHRLSIFTQSSSLQLCSIHLSKIASAGGTA*NISPATYFKFLHPCKSETTWGRSSTV 647
Query: 127 HSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
S GNA M P PPPTST+EL P K
Sbjct: 648 QSMWGNASVMPLAIVPMPPPTSTKELTPSK 737
Score = 66.6 bits (139), Expect(3) = 1e-048
Identities = 24/43 (55%), Positives = 36/43 (83%)
Frame = +3 / -2
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ + G+ER+E+EW K+ F+AGF +YKI PVLGTR++IE+ P*
Sbjct: 352 MVVVGGMERNEKEWAKLFFDAGFLNYKIHPVLGTRALIELYP* 224
Score = 30.9 bits (61), Expect(2) = 4e-021
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -2 / +3
Query: 544 FYGQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTP 428
+ G +S+ VP TG IL* PASK HS S S P
Sbjct: 222 YQG*SSMRALVPSTGCIL*LRKPASKKSLAHSFSFLSMP 338
Score = 25.4 bits (49), Expect(3) = 1e-048
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3 / -2
Query: 372 DRKNVETQCLFDLYIMTING 431
D ++ETQ FDL +M + G
Sbjct: 397 DEGSIETQLFFDLQMMVVVG 338
>gb|CV280707.1|CV280707 WS0137.B21_G07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_G07 3', mRNA sequence
Length = 919
Score = 139 bits (299), Expect(3) = 1e-047
Identities = 53/95 (55%), Positives = 74/95 (77%)
Frame = +3 / -2
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+SSLVDVGGG G + I +AFPH++C+VLDLP+VV+ +K+VAGDMF++V
Sbjct: 672 IFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAV 493
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
A+A+ LK I+H+W D DCVKILK CK+AI ++G
Sbjct: 492 PPAEAILLKWILHNWSDEDCVKILKRCKQAIMSKG 388
Score = 62.9 bits (131), Expect(3) = 1e-047
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3 / -2
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ G+ER+E+EW K+ F+AGF +YKI PVLG R++IE+ P*
Sbjct: 285 MVVAGGMERNEKEWAKLFFDAGFLNYKIYPVLGPRALIELYP* 157
Score = 25.8 bits (50), Expect(3) = 1e-047
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3 / -2
Query: 372 DRKNVETQCLFDLYIMTING 431
D ++ETQ FDL +M + G
Sbjct: 330 DEGSIETQLFFDLQMMVVAG 271
>gb|CV280517.1|CV280517 WS0136.B21_J20 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_J20 3', mRNA sequence
Length = 893
Score = 139 bits (299), Expect(3) = 1e-047
Identities = 53/95 (55%), Positives = 74/95 (77%)
Frame = +3 / -2
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+SSLVDVGGG G + I +AFPH++C+VLDLP+VV+ +K+VAGDMF++V
Sbjct: 664 IFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAV 485
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
A+A+ LK I+H+W D DCVKILK CK+AI ++G
Sbjct: 484 PPAEAILLKWILHNWSDEDCVKILKRCKQAIMSKG 380
Score = 62.9 bits (131), Expect(3) = 1e-047
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3 / -2
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ G+ER+E+EW K+ F+AGF +YKI PVLG R++IE+ P*
Sbjct: 277 MVVAGGMERNEKEWAKLFFDAGFLNYKIYPVLGPRALIELYP* 149
Score = 25.8 bits (50), Expect(3) = 1e-047
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3 / -2
Query: 372 DRKNVETQCLFDLYIMTING 431
D ++ETQ FDL +M + G
Sbjct: 322 DEGSIETQLFFDLQMMVVAG 263
>gb|CK096481.1|CK096481 UB15CPH11.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB15CPH11 3', mRNA sequence
Length = 882
Score = 140 bits (300), Expect(3) = 2e-047
Identities = 53/95 (55%), Positives = 72/95 (75%)
Frame = +3 / -2
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+SSLVDVGGG G + IA+AFPH++C+V DLP+VV+ +KYV GDMF+ V
Sbjct: 698 IFEGVSSLVDVGGGLGTMAKGIAEAFPHMDCTVFDLPHVVSDLQGCKNLKYVGGDMFQGV 519
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
A+A+ LK I+HDW D DCVKILK C++AI ++G
Sbjct: 518 PPAEAILLKWILHDWSDEDCVKILKRCRQAIMSKG 414
Score = 62.0 bits (129), Expect(3) = 2e-047
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +3 / -2
Query: 426 NGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
+G+ER+E+EW K+ F+AGF +YKI PVL TR++IE+ P*
Sbjct: 299 DGMERNEKEWAKLFFDAGFLNYKIHPVLATRALIELYP* 183
Score = 25.8 bits (50), Expect(3) = 2e-047
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 372 DRKNVETQCLFDLYIM 419
D ++ETQ LFDL++M
Sbjct: 356 DEGSIETQLLFDLHMM 309
>gb|DT504273.1|DT504273 WS01312.B21_L07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_L07 3', mRNA sequence
Length = 822
Score = 135 bits (289), Expect(3) = 3e-046
Identities = 52/95 (54%), Positives = 73/95 (76%)
Frame = +3 / -1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+SSLVDVGGG G + I +AFP ++C+VLDLP+VV+ +K+VAGDMF++V
Sbjct: 693 IFEGVSSLVDVGGGLGTMAKGITEAFPPMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAV 514
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
A+A+ LK I+H+W D DCVKILK CK+AI ++G
Sbjct: 513 PPAEAILLKWILHNWSDEDCVKILKRCKQAIMSKG 409
Score = 62.9 bits (131), Expect(3) = 3e-046
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3 / -1
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ G+ER+E+EW K+ F+AGF +YKI PVLG R++IE+ P*
Sbjct: 306 MVVAGGMERNEKEWAKLFFDAGFLNYKIYPVLGPRALIELYP* 178
Score = 25.8 bits (50), Expect(3) = 3e-046
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3 / -1
Query: 372 DRKNVETQCLFDLYIMTING 431
D ++ETQ FDL +M + G
Sbjct: 351 DEGSIETQLFFDLQMMVVAG 292
>gb|DN490332.1|DN490332 UK116TF06.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone UK116TF06 3', mRNA
sequence
Length = 805
Score = 183 bits (394), Expect = 1e-045
Identities = 78/167 (46%), Positives = 106/167 (63%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F I SLVDV GG G I +A+PH++ LDLP+VVA AP V +VAG+MF+++
Sbjct: 731 FNNIRSLVDVAGGIGRNVAEIVRAYPHIKGINLDLPHVVATAPKYEGVSHVAGNMFDAIP 552
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQC 398
+ADA+F+K I+HDW D CV+IL+NCKKAIP + GK+II DIV+ +V
Sbjct: 551 NADAIFMKRILHDWTDESCVEILRNCKKAIPEKTGKLIIADIVLQTDDHCDQLDDVRMAM 372
Query: 399 LFDLYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
++ +T G ER E+EWKK++ + GF YKII + SIIE P
Sbjct: 371 DLAMFAVTTGGKERTEQEWKKLLEDGGFARYKIIKIPALESIIEAYP 231
Score = 91.3 bits (193), Expect(2) = 8e-021
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = -2 / +1
Query: 346 TISSIITLPP*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSA 167
TIS++I+ P +G+AFLQF I T +S QSC I K ASA SN+ PAT+ T
Sbjct: 424 TISAMISFPVFSGIAFLQFLKISTHDSSVQSCNIRFMKIASALGIASNIFPATWETPSYF 603
Query: 166 GAPATTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRELI 47
GA ATT GRS + CG A ++ P PP TST +LI
Sbjct: 604 GAVATTCGRSKFIPLMCG*ALTISATFLPIPPATSTNDLI 723
Score = 29.0 bits (57), Expect(2) = 8e-021
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2 / +1
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPLIV 419
G SI+D MIL* P S FFHS S S P +V
Sbjct: 232 G*ASIIDSKAGILMIL*RAKPPSSNNFFHSCSVLSFPPVV 351
>gb|DT493173.1|DT493173 WS02553.C21_J21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_J21 3', mRNA sequence
Length = 822
Score = 144 bits (310), Expect(2) = 2e-044
Identities = 58/104 (55%), Positives = 77/104 (74%)
Frame = +3 / -1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F I SLVDV GG GG I +A+PH+E DLP+VVA AP V +VAG+MFE++
Sbjct: 693 FNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIP 514
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVV 350
+ADA+F++ I+HDW D CV+IL+NCKKAIP + GK+II+DIV+
Sbjct: 513 NADAIFIQRILHDWTDESCVEILRNCKKAIPEKTGKLIIVDIVL 382
Score = 97.7 bits (207), Expect(2) = 2e-022
Identities = 48/100 (48%), Positives = 61/100 (61%)
Frame = -2 / +2
Query: 346 TISSIITLPP*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSA 167
TIS++I+ P +G+AFLQF I T +S QSC I K ASA SN+ PAT+ T
Sbjct: 386 TISTMISFPVFSGIAFLQFLKISTHDSSVQSCNIRCMKIASALGIASNIFPATWETPSYF 565
Query: 166 GAPATTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRELI 47
GA ATT GRS + S CG A ++ PP PP TST +L+
Sbjct: 566 GAVATTCGRSKFIPSMCG*ALTISATCPPIPPATSTNDLM 685
Score = 54.7 bits (113), Expect(2) = 2e-044
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3 / -1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
++ +T G ER E+EWKK++ E GF+ YKII + SIIE P
Sbjct: 324 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 193
Score = 28.1 bits (55), Expect(2) = 2e-022
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2 / +2
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPLIV 419
G SI+D MIL* P S FFHS S S P +V
Sbjct: 194 G*ASIIDSKAGILMIL*REKPPSSNNFFHSCSVLSFPPVV 313
>gb|CV239394.1|CV239394 WS0232.B21_E06 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_E06
3', mRNA sequence
Length = 709
Score = 144 bits (310), Expect(2) = 2e-044
Identities = 58/104 (55%), Positives = 77/104 (74%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F I SLVDV GG GG I +A+PH+E DLP+VVA AP V +VAG+MFE++
Sbjct: 701 FNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIP 522
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVV 350
+ADA+F++ I+HDW D CV+IL+NCKKAIP + GK+II+DIV+
Sbjct: 521 NADAIFIQRILHDWTDESCVEILRNCKKAIPEKTGKLIIVDIVL 390
Score = 97.7 bits (207), Expect(2) = 2e-022
Identities = 48/100 (48%), Positives = 61/100 (61%)
Frame = -2 / +1
Query: 346 TISSIITLPP*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSA 167
TIS++I+ P +G+AFLQF I T +S QSC I K ASA SN+ PAT+ T
Sbjct: 394 TISTMISFPVFSGIAFLQFLKISTHDSSVQSCNIRCMKIASALGIASNIFPATWETPSYF 573
Query: 166 GAPATTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRELI 47
GA ATT GRS + S CG A ++ PP PP TST +L+
Sbjct: 574 GAVATTCGRSKFIPSMCG*ALTISATCPPIPPATSTNDLM 693
Score = 54.7 bits (113), Expect(2) = 2e-044
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
++ +T G ER E+EWKK++ E GF+ YKII + SIIE P
Sbjct: 332 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 201
Score = 28.1 bits (55), Expect(2) = 2e-022
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2 / +1
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPLIV 419
G SI+D MIL* P S FFHS S S P +V
Sbjct: 202 G*ASIIDSKAGILMIL*REKPPSSNNFFHSCSVLSFPPVV 321
>gb|DT489174.1|DT489174 WS02538.B21_H23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02538_H23 3', mRNA sequence
Length = 707
Score = 144 bits (310), Expect(2) = 2e-044
Identities = 58/104 (55%), Positives = 77/104 (74%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F I SLVDV GG GG I +A+PH+E DLP+VVA AP V +VAG+MFE++
Sbjct: 699 FNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIP 520
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVV 350
+ADA+F++ I+HDW D CV+IL+NCKKAIP + GK+II+DIV+
Sbjct: 519 NADAIFMQRILHDWTDESCVEILRNCKKAIPEKTGKLIIVDIVL 388
Score = 99.1 bits (210), Expect(2) = 7e-023
Identities = 49/100 (49%), Positives = 61/100 (61%)
Frame = -2 / +2
Query: 346 TISSIITLPP*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSA 167
TIS++I+ P +G+AFLQF I T +S QSC I K ASA SN+ PAT+ T
Sbjct: 392 TISTMISFPVFSGIAFLQFLKISTHDSSVQSCNIRCMKIASALGIASNIFPATWETPSYF 571
Query: 166 GAPATTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRELI 47
GA ATT GRS + S CG A ++ PP PP TST +LI
Sbjct: 572 GAVATTCGRSKFIPSMCG*ALTISATCPPIPPATSTNDLI 691
Score = 54.7 bits (113), Expect(2) = 2e-044
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
++ +T G ER E+EWKK++ E GF+ YKII + SIIE P
Sbjct: 330 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 199
Score = 28.1 bits (55), Expect(2) = 7e-023
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2 / +2
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPLIV 419
G SI+D MIL* P S FFHS S S P +V
Sbjct: 200 G*ASIIDSKAGILMIL*REKPPSSNNFFHSCSVLSFPPVV 319
>gb|CV234439.1|CV234439 WS01214.B21_O21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01214_O21 3', mRNA sequence
Length = 702
Score = 144 bits (310), Expect(2) = 2e-044
Identities = 58/104 (55%), Positives = 77/104 (74%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F I SLVDV GG GG I +A+PH+E DLP+VVA AP V +VAG+MFE++
Sbjct: 694 FNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIP 515
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVV 350
+ADA+F++ I+HDW D CV+IL+NCKKAIP + GK+II+DIV+
Sbjct: 514 NADAIFMQRILHDWTDESCVEILRNCKKAIPEKTGKLIIVDIVL 383
Score = 99.1 bits (210), Expect(2) = 7e-023
Identities = 49/100 (49%), Positives = 61/100 (61%)
Frame = -2 / +3
Query: 346 TISSIITLPP*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSA 167
TIS++I+ P +G+AFLQF I T +S QSC I K ASA SN+ PAT+ T
Sbjct: 387 TISTMISFPVFSGIAFLQFLKISTHDSSVQSCNIRCMKIASALGIASNIFPATWETPSYF 566
Query: 166 GAPATTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRELI 47
GA ATT GRS + S CG A ++ PP PP TST +LI
Sbjct: 567 GAVATTCGRSKFIPSMCG*ALTISATCPPIPPATSTNDLI 686
Score = 54.7 bits (113), Expect(2) = 2e-044
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
++ +T G ER E+EWKK++ E GF+ YKII + SIIE P
Sbjct: 325 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 194
Score = 28.1 bits (55), Expect(2) = 7e-023
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2 / +3
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPLIV 419
G SI+D MIL* P S FFHS S S P +V
Sbjct: 195 G*ASIIDSKAGILMIL*REKPPSSNNFFHSCSVLSFPPVV 314
>gb|CV235235.1|CV235235 WS01218.B21_E23 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01218_E23 3', mRNA sequence
Length = 714
Score = 125 bits (267), Expect(3) = 3e-044
Identities = 50/90 (55%), Positives = 67/90 (74%)
Frame = +3 / -1
Query: 51 SSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADA 230
SSLVDVGGG G + I +AFP ++C+VLDLP+VV +KYVAGDMF++V A+A
Sbjct: 714 SSLVDVGGGIGTMAKGITEAFPTMDCTVLDLPHVVFDLQGCKNLKYVAGDMFQAVPPAEA 535
Query: 231 VFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
+ LK ++H+W D DCVKILK CK+AI ++G
Sbjct: 534 ILLKWMLHNWSDEDCVKILKRCKQAIMSKG 445
Score = 66.6 bits (139), Expect(3) = 3e-044
Identities = 24/43 (55%), Positives = 36/43 (83%)
Frame = +3 / -1
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ + G+ER+E+EW K+ F+AGF +YKI PVLGTR++IE+ P*
Sbjct: 342 MVVVGGMERNEKEWAKLFFDAGFLNYKIHPVLGTRALIELYP* 214
Score = 25.4 bits (49), Expect(3) = 3e-044
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3 / -1
Query: 372 DRKNVETQCLFDLYIMTING 431
D ++ETQ FDL +M + G
Sbjct: 387 DEGSIETQLFFDLQMMVVVG 328
>gb|CV225757.1|CV225757 WS0162.B21_E24 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_E24
3', mRNA sequence
Length = 920
Score = 146 bits (314), Expect(2) = 4e-042
Identities = 55/104 (52%), Positives = 79/104 (75%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F + +LVDVGGG GG I KA+PH++ DLP+VVA APA V +V G+ FE++
Sbjct: 417 FDDVETLVDVGGGTGGNLAEIVKAYPHIKGINFDLPHVVAAAPAYNGVSHVGGNFFEAIP 596
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVV 350
+AD++F+K ++HDWGD DCVKILKNC+KA+P + GK+I+++IV+
Sbjct: 597 NADSIFMKWVLHDWGDEDCVKILKNCRKAMPEKTGKLILVEIVL 728
Score = 45.1 bits (92), Expect(2) = 4e-042
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3 / +3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIE 530
++ + G ER E EWKK++ E GF YKII + SIIE
Sbjct: 783 MFAHSTGGKERTELEWKKLLEEGGFPRYKIINIPALPSIIE 905
>gb|CV240212.1|CV240212 WS0234.B21_M02 PT-MB-A-13 Populus trichocarpa cDNA clone WS0234_M02
3', mRNA sequence
Length = 673
Score = 128 bits (275), Expect(2) = 1e-039
Identities = 51/96 (53%), Positives = 67/96 (69%)
Frame = +3 / -2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F I SLVDV GG GG I +A+PH+E DLP+VVA AP V +VAG+MFE++
Sbjct: 663 FNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIP 484
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGK 326
+ADA+F++ I+HDW D C +IL+NCKKAIP + K
Sbjct: 483 NADAIFIQRILHDWTDESCAEILRNCKKAIPEKNWK 376
Score = 54.7 bits (113), Expect(2) = 1e-039
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
++ +T G ER E+EWKK++ E GF+ YKII + SIIE P
Sbjct: 293 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 162
>gb|DN488662.1|DN488662 S021B06.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S021B06 3', mRNA sequence
Length = 568
Score = 109 bits (232), Expect(3) = 6e-039
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = +3 / -3
Query: 111 FPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILK 290
F HL+C+V DLP+VVAG +KY+ GDMFE++ ADA+ LK I+HDW + +CVKILK
Sbjct: 512 FQHLDCTVFDLPHVVAGLEGSENLKYLGGDMFEAIPQADAILLKWILHDWNEEECVKILK 333
Query: 291 NCKKAIPAQGGKVIIL 338
CK+ I +GG +I+
Sbjct: 332 QCKEEIKGRGGGKVII 285
Score = 63.8 bits (133), Expect(3) = 6e-039
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP*KP 548
L ++ + G ER+E+EW K+ +AGF+ YKI PVLG RS+IEV P* P
Sbjct: 215 LMMILVTGKERNEKEWAKLFTDAGFSHYKINPVLGLRSLIEVYP**P 75
Score = 26.3 bits (51), Expect(3) = 6e-039
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3 / -2
Query: 57 LVDVGGGFGGATQAIAKAFP 116
+VDVGGG G +AIA P
Sbjct: 567 VVDVGGGTGTVAKAIAYRVP 508
>gb|DT505641.1|DT505641 WS01811.C21_H13 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01811_H13 3', mRNA sequence
Length = 876
Score = 131 bits (280), Expect(2) = 8e-039
Identities = 55/106 (51%), Positives = 72/106 (67%)
Frame = +3 / -3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F G+ +LVDVGGG G A KAFP +E DLP+VV+ A VK V GDMF+SV
Sbjct: 637 LFDGLKTLVDVGGGNGTALGKFVKAFPWIEGINFDLPHVVSVAAECEGVKQVGGDMFDSV 458
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
ADAV++ ++ DW + DCV+ILK CK+AIP GKVII++ V+G
Sbjct: 457 PKADAVYIMKVLQDWNNDDCVRILKKCKEAIPKDKGKVIIVETVIG 320
Score = 49.6 bits (102), Expect(2) = 8e-039
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3 / -3
Query: 420 TINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
T +G ER EW ++ EAGF+SY IIP+ +S+IE P*
Sbjct: 256 TNSGKERTSEEWDCVLKEAGFSSYNIIPIRAVQSVIEAFP* 134
>gb|CX659487.1|CX659487 PO01031C05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031C05 5', mRNA sequence
Length = 621
Score = 127 bits (272), Expect(2) = 5e-037
Identities = 51/97 (52%), Positives = 68/97 (70%)
Frame = +3 / +3
Query: 63 DVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLK 242
DVGGG G Q + KAFP ++ DLP+VV+ AP V++V GD F+SV ADA FL
Sbjct: 3 DVGGGNGTTLQMLVKAFPCIQGINFDLPHVVSAAPESEGVQHVGGDFFQSVPKADAAFLM 182
Query: 243 SIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
++HDW D +C++ILKNCK+AI + GKVII++ VVG
Sbjct: 183 WVLHDWNDEECIQILKNCKEAIQSDKGKVIIVEAVVG 293
Score = 47.3 bits (97), Expect(2) = 5e-037
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP*KP 548
G ER +EW+ ++ EAGF+SY I P+ +S+I P* P
Sbjct: 366 GKERTSKEWEYVLKEAGFSSYTIKPIRAVQSVIVASP*SP 485
>gb|CX659497.1|CX659497 PO01031D04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031D04 5', mRNA sequence
Length = 621
Score = 127 bits (272), Expect(2) = 5e-037
Identities = 51/97 (52%), Positives = 68/97 (70%)
Frame = +3 / +3
Query: 63 DVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLK 242
DVGGG G Q + KAFP ++ DLP+VV+ AP V++V GD F+SV ADA FL
Sbjct: 3 DVGGGNGTTLQMLVKAFPCIQGINFDLPHVVSAAPESEGVQHVGGDFFQSVPKADAAFLM 182
Query: 243 SIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
++HDW D +C++ILKNCK+AI + GKVII++ VVG
Sbjct: 183 WVLHDWNDEECIQILKNCKEAIQSDKGKVIIVEAVVG 293
Score = 47.3 bits (97), Expect(2) = 5e-037
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP*KP 548
G ER +EW+ ++ EAGF+SY I P+ +S+I P* P
Sbjct: 366 GKERTSKEWEYVLKEAGFSSYTIKPIRAVQSVIVASP*SP 485
>gb|CX659511.1|CX659511 PO01031E10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031E10 5', mRNA sequence
Length = 621
Score = 127 bits (272), Expect(2) = 5e-037
Identities = 51/97 (52%), Positives = 68/97 (70%)
Frame = +3 / +3
Query: 63 DVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLK 242
DVGGG G Q + KAFP ++ DLP+VV+ AP V++V GD F+SV ADA FL
Sbjct: 3 DVGGGNGTTLQMLVKAFPCIQGINFDLPHVVSAAPESEGVQHVGGDFFQSVPKADAAFLM 182
Query: 243 SIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
++HDW D +C++ILKNCK+AI + GKVII++ VVG
Sbjct: 183 WVLHDWNDEECIQILKNCKEAIQSDKGKVIIVEAVVG 293
Score = 47.3 bits (97), Expect(2) = 5e-037
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3 / +3
Query: 429 GVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP*KP 548
G ER +EW+ ++ EAGF+SY I P+ +S+I P* P
Sbjct: 366 GKERTSKEWEYVLKEAGFSSYTIKPIRAVQSVIVASP*SP 485
>gb|CA932779.1|CA932779 MTU5CS.P17.C10 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 624
Score = 105 bits (224), Expect(3) = 2e-036
Identities = 39/71 (54%), Positives = 54/71 (76%)
Frame = +3 / -1
Query: 108 AFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKIL 287
AFPH++C+V +LP+VV+ +KYVAGDMF+ V A+A+ LK ++HDW D DCVKIL
Sbjct: 624 AFPHMDCTVFELPHVVSDLQGCKNLKYVAGDMFQGVPPAEAILLKWMLHDWSDEDCVKIL 445
Query: 288 KNCKKAIPAQG 320
K CK+AI ++G
Sbjct: 444 KRCKQAITSKG 412
Score = 61.1 bits (127), Expect(3) = 2e-036
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3 / -1
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ +G+ER+E EW K+ F+AGF +YKI PVL TR++IE+ P*
Sbjct: 309 MVAASGMERNEEEWAKLFFDAGFLNYKIHPVLDTRALIELYP* 181
Score = 24.0 bits (46), Expect(3) = 2e-036
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / -1
Query: 372 DRKNVETQCLFDLYIM 419
D ++ETQ LFDL +M
Sbjct: 354 DEGSIETQLLFDLEMM 307
>gb|AJ772970.1|AJ772970 AJ772970 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000200003B11F1, mRNA sequence
Length = 597
Score = 77.1 bits (162), Expect(4) = 1e-035
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +3 / +2
Query: 180 VKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
+KYV GDMFE+V AD + LK +HDW D DCVKILK CK AI ++G
Sbjct: 284 LKYVGGDMFEAVPPADVILLKWTLHDWNDEDCVKILKQCKHAIMSKG 424
Score = 67.0 bits (140), Expect(4) = 1e-035
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +3 / +2
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVV 155
+F+G++SLVDVGGG G + IA+AFPH++C+V DLP VV
Sbjct: 137 IFEGVNSLVDVGGGSGTMAKGIAEAFPHMDCTVFDLPRVV 256
Score = 38.6 bits (78), Expect(4) = 1e-035
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 414 IMTINGVERDEREWKKIIFEAGF 482
++T+ G+ER+E EW K+ F+AGF
Sbjct: 524 MVTVTGLERNEMEWAKLFFDAGF 592
Score = 23.1 bits (44), Expect(4) = 1e-035
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3 / +2
Query: 315 QGGKVIILDIVVGA 356
+ GKVII+DIV G+
Sbjct: 431 KAGKVIIIDIVRGS 472
>gb|CN523142.1|CN523142 GQ015M01.B3_G24 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_G24 5', mRNA sequence
Length = 728
Score = 146 bits (314), Expect = 1e-034
Identities = 55/104 (52%), Positives = 79/104 (75%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F + +LVDVGGG GG I KA+PH++ DLP+VVA APA V +V G+ FE++
Sbjct: 319 FDDVETLVDVGGGTGGNLAEIVKAYPHIKGINFDLPHVVAAAPAYNGVSHVGGNFFEAIP 498
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVV 350
+AD++F+K ++HDWGD DCVKILKNC+KA+P + GK+I+++IV+
Sbjct: 499 NADSIFMKWVLHDWGDEDCVKILKNCRKAMPEKTGKLILVEIVL 630
>gb|DT503437.1|DT503437 WS0136.BR_J20 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_J20 5', mRNA sequence
Length = 864
Score = 139 bits (299), Expect = 2e-032
Identities = 53/95 (55%), Positives = 74/95 (77%)
Frame = +3 / +3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+SSLVDVGGG G + I +AFPH++C+VLDLP+VV+ +K+VAGDMF++V
Sbjct: 579 IFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAV 758
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
A+A+ LK I+H+W D DCVKILK CK+AI ++G
Sbjct: 759 PPAEAILLKWILHNWSDEDCVKILKRCKQAIMSKG 863
>gb|DT503659.1|DT503659 WS0137.BR_G07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_G07 5', mRNA sequence
Length = 905
Score = 139 bits (299), Expect = 2e-032
Identities = 53/95 (55%), Positives = 74/95 (77%)
Frame = +3 / +3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+SSLVDVGGG G + I +AFPH++C+VLDLP+VV+ +K+VAGDMF++V
Sbjct: 582 IFEGVSSLVDVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAV 761
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
A+A+ LK I+H+W D DCVKILK CK+AI ++G
Sbjct: 762 PPAEAILLKWILHNWSDEDCVKILKRCKQAIMSKG 866
>gb|DN484751.1|DN484751 K015P23.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K015P23 3', mRNA sequence
Length = 612
Score = 119 bits (255), Expect(2) = 2e-030
Identities = 49/109 (44%), Positives = 68/109 (62%)
Frame = +3 / -2
Query: 213 VSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVET 392
+ +ADA+F+K I+HDW D CV+IL+NCKKAIP + GK+II DIV+ +V
Sbjct: 521 IPNADAIFMKRILHDWTDESCVEILRNCKKAIPEKTGKLIIADIVLQTDDHCDQLDDVRM 342
Query: 393 QCLFDLYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP 539
++ +T G ER E+EWKK++ + GF YKII + SIIE P
Sbjct: 341 AMDLAMFAVTTGGKERTEQEWKKLLEDGGFARYKIIKIPALESIIEAYP 195
Score = 33.1 bits (66), Expect(2) = 2e-030
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3 / -1
Query: 141 LPNVVAGAPADTAVKYVAGDMFESVS 218
LP+VVA AP V +VAG+MF++ S
Sbjct: 594 LPHVVATAPKYEGVSHVAGNMFDAYS 517
>gb|BU878639.1|BU878639 V049F12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 657
Score = 133 bits (284), Expect = 2e-030
Identities = 57/152 (37%), Positives = 85/152 (55%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVD+GGG G +A+ +P ++ DLP+V+ APA V++V GDMFESV
Sbjct: 18 FKNLKQLVDIGGGLGHTMKAVTSKYPQIKGINFDLPHVIEHAPAYPGVEHVGGDMFESVP 197
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQC 398
DA+FLK I+H+W D C+K+LKNC KAIP G +++ ++ +S K +
Sbjct: 198 KGDAIFLKWILHNWSDDHCLKLLKNCYKAIPEDGKVIVMESVLPITAKTSPAAKAISQLD 377
Query: 399 LFDLYIMTINGVERDEREWKKIIFEAGFTSYK 494
+ + G ER E E+ + AGF K
Sbjct: 378 VLMMMSQNPGGKERTEDEFMALATAAGFRGIK 473
>gb|DN502084.1|DN502084 V049F12.5pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V049F12 5', mRNA sequence
Length = 650
Score = 133 bits (284), Expect = 2e-030
Identities = 57/152 (37%), Positives = 85/152 (55%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+ + LVD+GGG G +A+ +P ++ DLP+V+ APA V++V GDMFESV
Sbjct: 38 FKNLKQLVDIGGGLGHTMKAVTSKYPQIKGINFDLPHVIEHAPAYPGVEHVGGDMFESVP 217
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQC 398
DA+FLK I+H+W D C+K+LKNC KAIP G +++ ++ +S K +
Sbjct: 218 KGDAIFLKWILHNWSDDHCLKLLKNCYKAIPEDGKVIVMESVLPITAKTSPAAKAISQLD 397
Query: 399 LFDLYIMTINGVERDEREWKKIIFEAGFTSYK 494
+ + G ER E E+ + AGF K
Sbjct: 398 VLMMMSQNPGGKERTEDEFMALATAAGFRGIK 493
>gb|CV234783.1|CV234783 WS01216.B21_E17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01216_E17 3', mRNA sequence
Length = 633
Score = 77.1 bits (162), Expect(3) = 5e-030
Identities = 28/47 (59%), Positives = 39/47 (82%)
Frame = +3 / -1
Query: 180 VKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
+KYVAGDMF++V A+A+ LK ++H+W D DCVKILK CK+AI ++G
Sbjct: 585 LKYVAGDMFQAVPPAEAILLKWMLHNWSDEDCVKILKRCKQAIMSKG 445
Score = 66.6 bits (139), Expect(3) = 5e-030
Identities = 24/43 (55%), Positives = 36/43 (83%)
Frame = +3 / -1
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ + G+ER+E+EW K+ F+AGF +YKI PVLGTR++IE+ P*
Sbjct: 342 MVVVGGMERNEKEWAKLFFDAGFLNYKIHPVLGTRALIELYP* 214
Score = 25.4 bits (49), Expect(3) = 5e-030
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3 / -1
Query: 372 DRKNVETQCLFDLYIMTING 431
D ++ETQ FDL +M + G
Sbjct: 387 DEGSIETQLFFDLQMMVVVG 328
>gb|AJ771700.1|AJ771700 AJ771700 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600004F04F1, mRNA sequence
Length = 632
Score = 130 bits (279), Expect = 9e-030
Identities = 54/106 (50%), Positives = 72/106 (67%)
Frame = +3 / +3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F G+ +LVDVGGG G A KAFP +E DLP+VV+ A VK V GDMF+SV
Sbjct: 201 LFDGLKTLVDVGGGNGTALGKFVKAFPWIEGINFDLPHVVSVAAECEGVKQVGGDMFDSV 380
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVG 353
ADAVF+ ++ DW + DCV+IL+ CK+AIP GKV+I++ V+G
Sbjct: 381 PKADAVFIMKVLQDWNNDDCVRILRKCKEAIPKDKGKVVIVETVIG 518
>gb|CK099728.1|CK099728 A082P19.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A082P19 5', mRNA sequence
Length = 374
Score = 130 bits (278), Expect = 1e-029
Identities = 49/85 (57%), Positives = 64/85 (75%)
Frame = +3 / +1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+SSLVDVGGG G + IA+AFPH++C+V DLPNVV+ +KYV GDMF+ V
Sbjct: 115 IFEGVSSLVDVGGGLGTMAKGIAEAFPHMDCTVFDLPNVVSDLQGCKNLKYVGGDMFQGV 294
Query: 216 SSADAVFLKSIIHDWGDADCVKILK 290
A+A+ LK ++HDW D DCVKILK
Sbjct: 295 PPAEAILLKWVLHDWSDEDCVKILK 369
>gb|DV465820.1|DV465820 MTUNUL1.P43.E12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 850
Score = 127 bits (271), Expect = 1e-028
Identities = 48/85 (56%), Positives = 66/85 (77%)
Frame = +3 / +1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+SSLVDVGGG G + I +AFPH++C+VLDLP+VV+ +KYVAGDMF++V
Sbjct: 592 IFEGVSSLVDVGGGIGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKYVAGDMFQAV 771
Query: 216 SSADAVFLKSIIHDWGDADCVKILK 290
A+A+ LK ++H+W D DCVKILK
Sbjct: 772 PPAEAILLKWMLHNWSDEDCVKILK 846
>gb|CA933451.1|CA933451 MTU5CS.P8.C02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 614
Score = 79.4 bits (167), Expect(3) = 1e-028
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3 / -3
Query: 180 VKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
+KYVAGDMF+ V A+A+ LK ++HDW D DCVKILK CK+AI ++G
Sbjct: 552 LKYVAGDMFQGVPPAEAILLKWMLHDWSDEDCVKILKRCKQAITSKG 412
Score = 61.1 bits (127), Expect(3) = 1e-028
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3 / -3
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ +G+ER+E EW K+ F+AGF +YKI PVL TR++IE+ P*
Sbjct: 309 MVAASGMERNEEEWAKLFFDAGFLNYKIHPVLDTRALIELYP* 181
Score = 24.0 bits (46), Expect(3) = 1e-028
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 372 DRKNVETQCLFDLYIM 419
D ++ETQ LFDL +M
Sbjct: 354 DEGSIETQLLFDLEMM 307
>gb|CA932285.1|CA932285 MTU5CS.P11.A06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 560
Score = 79.4 bits (167), Expect(3) = 1e-028
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3 / -3
Query: 180 VKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
+KYVAGDMF+ V A+A+ LK ++HDW D DCVKILK CK+AI ++G
Sbjct: 552 LKYVAGDMFQGVPPAEAILLKWMLHDWSDEDCVKILKRCKQAITSKG 412
Score = 61.1 bits (127), Expect(3) = 1e-028
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3 / -3
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ +G+ER+E EW K+ F+AGF +YKI PVL TR++IE+ P*
Sbjct: 309 MVAASGMERNEEEWAKLFFDAGFLNYKIHPVLDTRALIELYP* 181
Score = 24.0 bits (46), Expect(3) = 1e-028
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 372 DRKNVETQCLFDLYIM 419
D ++ETQ LFDL +M
Sbjct: 354 DEGSIETQLLFDLEMM 307
>gb|CX659723.1|CX659723 PO01013C03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01013C03 5', mRNA sequence
Length = 634
Score = 126 bits (269), Expect = 2e-028
Identities = 50/112 (44%), Positives = 72/112 (64%)
Frame = +3 / +3
Query: 33 TVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFES 212
T F+ + LV++GGG G +AI +PH++ DLP+V+ AP V++V GDMFES
Sbjct: 81 TGFKNLKQLVEIGGGMGHTLKAIISKYPHIKGINFDLPHVIEHAPTCPGVEHVGGDMFES 260
Query: 213 VSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
V DA+FLK I+HDW D C+K+LKNC KAIP G +++ ++ A +S
Sbjct: 261 VPKGDAIFLKWILHDWSDDHCLKLLKNCYKAIPDNGKVIVMESVLSIAAKTS 416
>emb|AJ698925.1| Populus deltoides x Populus maximowiczii partial mRNA for putative
O-methyltransferase
Length = 453
Score = 74.4 bits (156), Expect(3) = 3e-028
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = +3 / +1
Query: 192 AGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQG 320
AGDMF++V A+A+ LK I+HDW D DCVKILK CK+AI ++G
Sbjct: 1 AGDMFQAVPPAEAILLKCILHDWSDEDCVKILKRCKQAIMSEG 129
Score = 64.3 bits (134), Expect(3) = 3e-028
Identities = 23/43 (53%), Positives = 36/43 (83%)
Frame = +3 / +1
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
++ ++GVER+E+EW K+ F++GF +YKI PV GTR++IE+ P*
Sbjct: 232 MVVVSGVERNEKEWAKLFFDSGFLNYKIHPVPGTRAVIELYP* 360
Score = 24.4 bits (47), Expect(3) = 3e-028
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 372 DRKNVETQCLFDLYIMTI 425
D ++ETQ +FDL +M +
Sbjct: 187 DEGSIETQLIFDLAMMVV 240
>gb|BU811664.1|BU811664 UL87T2E09 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 595
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 98 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 277
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 278 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 445
>gb|BU815201.1|BU815201 N038E07 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 660
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 172 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 351
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 352 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 519
>gb|CF234075.1|CF234075 PtaJXO2C3C0305 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 694
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 173 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 352
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 353 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 520
>gb|CN524481.1|CN524481 GQ015M13.T3_B02 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_B02 5', mRNA sequence
Length = 812
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 280 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 459
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 460 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 627
>gb|CK319284.1|CK319284 X9P09a07 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 782
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 298 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 477
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 478 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 645
>gb|CK319339.1|CK319339 X9P09f06 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 501
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / +3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 123 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 302
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 303 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 470
>gb|CV227518.1|CV227518 WS0167.B21_G15 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_G15
3', mRNA sequence
Length = 899
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / -1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 752 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 573
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 572 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 405
>gb|CV231042.1|CV231042 WS0193.B21_G01 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_G01 3', mRNA sequence
Length = 872
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / -3
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 753 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 574
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 573 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 406
>gb|CV237447.1|CV237447 WS01227.B21_B24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01227_B24 3', mRNA sequence
Length = 847
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / -2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 831 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 652
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 651 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 484
>gb|CV261308.1|CV261308 WS02016.B21_G21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02016_G21 3', mRNA sequence
Length = 935
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / +2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 74 FEGLTSLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 253
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 254 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 421
>gb|CV265340.1|CV265340 WS02026.B21_P18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02026_P18 3', mRNA sequence
Length = 839
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / -2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 802 FEGLTSLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 623
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 622 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 455
>gb|CV272694.1|CV272694 WS0158.B21_G20 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_G20 3', mRNA sequence
Length = 869
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / -2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 829 FEGLTSLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 650
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 649 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 482
>gb|DT484752.1|DT484752 WS02526.B21_F05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02526_F05 3', mRNA sequence
Length = 838
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / -2
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 711 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 532
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 531 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 364
>gb|DT511606.1|DT511606 WS02416.B21_O19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_O19 3', mRNA sequence
Length = 927
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / -1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 732 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 553
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 552 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 385
>gb|DV466436.1|DV466436 MTUNUL1.P50.F03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 865
Score = 125 bits (267), Expect = 4e-028
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++SLVDVGGG G I +P ++ DLP+V+ AP+ V++V GDMF SV
Sbjct: 496 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 675
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNV 386
ADAVF+K I HDW DA C+K LKNC A+P G +++ I+ A +S K V
Sbjct: 676 KADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGV 843
>emb|A26486.1| Poplar pOMT1.A/pOMT1.B combined sequence
Length = 1244
Score = 125 bits (267), Expect = 4e-028
Identities = 53/115 (46%), Positives = 71/115 (61%)
Frame = +3 / +1
Query: 39 FQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVS 218
F+G++S+VDVGGG G I P ++ DLP+V+ APA V++V GDMF SV
Sbjct: 442 FEGLNSIVDVGGGTGATVNMIVSKHPSIKGINFDLPHVIGDAPAYPGVEHVGGDMFASVP 621
Query: 219 SADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKN 383
ADA+F+K I HDW D C+K LKNC +A+PA G +I I+ A +S KN
Sbjct: 622 KADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVIIAECILPEAPDTSLATKN 786
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 333,062,658
Number of Sequences: 369679
Number of extensions: 4207266
Number of successful extensions: 33520
Number of sequences better than 1.0e-020: 93
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 10250291380
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)