TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440716.2.1
(774 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ774738.1|AJ774738 AJ774738 Populus euphratica shoot 3-... 158 3e-038
gb|CK095578.1|CK095578 UA14CPH12.3pR Populus dormant cambiu... 150 7e-036
gb|BP931106.1|BP931106 BP931106 full-length enriched poplar... 149 1e-035
gb|BP935319.1|BP935319 BP935319 full-length enriched poplar... 149 1e-035
gb|BP932015.1|BP932015 BP932015 full-length enriched poplar... 148 5e-035
gb|CK091254.1|CK091254 F066P42.3pR Populus flower cDNA libr... 130 1e-033
gb|DT477027.1|DT477027 WS01231.B21_L09 PT-GT-FL-A-3 Populus... 115 3e-031
gb|BP934618.1|BP934618 BP934618 full-length enriched poplar... 118 1e-029
gb|BU891342.1|BU891342 P048H10 Populus petioles cDNA librar... 127 1e-028
gb|CV244301.1|CV244301 WS0254.B21_E14 PT-MB-N-A-15 Populus ... 125 3e-028
gb|CV245380.1|CV245380 WS0257.B21_E04 PT-MB-N-A-15 Populus ... 125 3e-028
gb|DN490532.1|DN490532 UL60PB12.3pR Populus cold stressed l... 125 3e-028
gb|DT489381.1|DT489381 WS02542.B21_B04 PT-MB-N-A-15 Populus... 125 3e-028
gb|DT492065.1|DT492065 WS02549.C21_J03 PT-MB-N-A-15 Populus... 125 3e-028
gb|DN500518.1|DN500518 UL60PB12.5pR Populus cold stressed l... 123 1e-027
gb|CK100898.1|CK100898 F007P86.5pR Populus flower cDNA libr... 121 7e-027
gb|CV240642.1|CV240642 WS0251.B21_P03 PT-MB-N-A-15 Populus ... 121 7e-027
gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Popu... 119 2e-026
gb|CA927209.1|CA927209 MTU6CR.P6.C10 Aspen root cDNA Librar... 118 3e-026
gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus t... 117 6e-026
gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populu... 117 6e-026
gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populu... 117 6e-026
gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Popul... 117 6e-026
gb|CV229269.1|CV229269 WS01912.B21_M05 PT-DX-N-A-10 Populus... 116 2e-025
gb|CK102642.1|CK102642 G085P75.5pR Populus tension wood cDN... 114 6e-025
gb|BP930106.1|BP930106 BP930106 full-length enriched poplar... 113 2e-024
gb|DN489285.1|DN489285 T020F04.3pR Populus shoot meristem c... 113 2e-024
gb|DT476446.1|DT476446 WS01229.B21_J24 PT-GT-FL-A-3 Populus... 110 2e-024
gb|CX178016.1|CX178016 G09_45-81_13.ab1 leaf inoculated wit... 112 2e-024
gb|CX180397.1|CX180397 C08_45-107_06.ab1 leaf inoculated wi... 112 2e-024
gb|CX180523.1|CX180523 A03_45-107_01.ab1 leaf inoculated wi... 112 2e-024
gb|CX183741.1|CX183741 A09_45-83_01.ab1 leaf inoculated wit... 112 2e-024
gb|BP933703.1|BP933703 BP933703 full-length enriched poplar... 112 2e-024
gb|DT512707.1|DT512707 WS02420.B21_A09 PTxD-ICC-N-A-14 Popu... 112 2e-024
gb|CV255664.1|CV255664 WS02414.B21_K19 PTxD-ICC-N-A-14 Popu... 111 4e-024
gb|CV257201.1|CV257201 WS0245.B21_P10 PTxD-ICC-N-A-14 Popul... 111 4e-024
gb|DT516411.1|DT516411 WS02431.B21_E19 PTxD-ICC-N-A-14 Popu... 111 4e-024
gb|CA933833.1|CA933833 MTU3TS.P13.C08 Aspen stem cDNA Libra... 110 1e-023
gb|CF119369.1|CF119369 MTU10CS.P16.H11 Aspen stem cDNA Libr... 110 1e-023
gb|CF119771.1|CF119771 MTU10CS.P6.B05 Aspen stem cDNA Libra... 110 1e-023
gb|CX177292.1|CX177292 G05_69-104_13.ab1 leaf inoculated wi... 110 1e-023
gb|DN488894.1|DN488894 S050D08.3pR Populus imbibed seed cDN... 110 1e-023
gb|CN520132.1|CN520132 GQ0106.B3_K07 GQ010 Populus trichoca... 109 2e-023
gb|AJ772854.1|AJ772854 AJ772854 Populus euphratica leaf 3-6... 109 2e-023
gb|CV236341.1|CV236341 WS01223.B21_M04 PT-GT-FL-A-3 Populus... 109 2e-023
gb|CV282585.1|CV282585 WS0185.B21_A14 PTxD-IL-N-A-9 Populus... 109 2e-023
gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus... 109 2e-023
gb|CV258292.1|CV258292 WS0249.B21_B21 PTxD-ICC-N-A-14 Popul... 109 3e-023
gb|CX178075.1|CX178075 G12_45-100_14.ab1 leaf inoculated wi... 109 3e-023
gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremonti... 108 4e-023
gb|CV271864.1|CV271864 WS0155.B21_O06 PTxN-IB-A-6 Populus t... 108 5e-023
gb|DN488227.1|DN488227 R042F04.3pR Populus root cDNA librar... 107 7e-023
gb|BU865351.1|BU865351 S052E05 Populus imbibed seed cDNA li... 107 9e-023
gb|CK093949.1|CK093949 I006P43.3pR Populus senescing leaves... 106 2e-022
gb|CK089691.1|CK089691 C027P32.3pR Populus strain T89 leave... 105 2e-022
gb|CV257070.1|CV257070 WS0245.B21_J10 PTxD-ICC-N-A-14 Popul... 105 2e-022
gb|BU832863.1|BU832863 T039B01 Populus apical shoot cDNA li... 105 5e-022
gb|CV283422.1|CV283422 WS0187.B21_E19 PTxD-IL-N-A-9 Populus... 104 6e-022
gb|BU885976.1|BU885976 R038G09 Populus root cDNA library Po... 102 2e-021
gb|DT510522.1|DT510522 WS02426.BR_M15 PTxD-ICC-N-A-14 Popul... 102 3e-021
gb|BI122064.1|BI122064 I001P93P Populus leaf cDNA library P... 101 4e-021
gb|CV243768.1|CV243768 WS0252.B21_M19 PT-MB-N-A-15 Populus ... 100 8e-021
gb|DT491072.1|DT491072 WS02546.C21.1_L18 PT-MB-N-A-15 Popul... 100 8e-021
gb|DT505915.1|DT505915 WS01812.C21_D06 PTxD-IL-N-A-9 Populu... 100 8e-021
>gb|AJ774738.1|AJ774738 AJ774738 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300023G03F1, mRNA sequence
Length = 670
Score = 158 bits (340), Expect = 3e-038
Identities = 64/115 (55%), Positives = 82/115 (71%)
Frame = -2 / +2
Query: 728 SGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPR 549
S +LPDG + V RG +V WAPQ+EVLAHPA GGF THNGWNST+E+I EGVPM+C P
Sbjct: 197 SESLPDGFLEMVGKRGYIVKWAPQQEVLAHPATGGFWTHNGWNSTLESICEGVPMICQPF 376
Query: 548 HGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
GDQ N RYV DVWK+GT L +LER +++ AI L +G+E+++R+ K
Sbjct: 377 FGDQRVNARYVSDVWKIGTHLEYNKLERREIERAIKALMVETKGQEMRQRIVSLK 541
>gb|CK095578.1|CK095578 UA14CPH12.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA14CPH12 3', mRNA sequence
Length = 574
Score = 150 bits (323), Expect = 7e-036
Identities = 64/125 (51%), Positives = 83/125 (66%)
Frame = -2 / -3
Query: 728 SGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPR 549
S +LPDG + V RG +V WAPQ+EVLAHPA GGF TH+GWNST+E+I EGVPM+C P
Sbjct: 413 SESLPDGFLEMVGRRGYIVKWAPQQEVLAHPATGGFWTHSGWNSTLESICEGVPMICQPF 234
Query: 548 HGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIAAAK 369
GDQ N RYV DVWK+G L +LER +++ AI L +G+ +++R+ K
Sbjct: 233 SGDQRVNARYVSDVWKIGIHLEYNKLERREIERAIKGLMVETKGQGMRQRIVSLKEKVNL 54
Query: 368 GIGIG 354
IG G
Sbjct: 53 CIGHG 39
>gb|BP931106.1|BP931106 BP931106 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-018_K10.r 3', mRNA sequence
Length = 608
Score = 149 bits (321), Expect = 1e-035
Identities = 61/115 (53%), Positives = 79/115 (68%)
Frame = -2 / -3
Query: 728 SGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPR 549
S +LPDG + V RG +V WAPQ++VLAHPA GGF THNGWNST+E+I EGVPM+C P
Sbjct: 576 SESLPDGFLEMVGKRGYIVKWAPQQQVLAHPATGGFWTHNGWNSTLESICEGVPMICQPF 397
Query: 548 HGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
GDQ N RYV DVWK+G L +LER +++ AI L +G+ +++R K
Sbjct: 396 FGDQRVNARYVSDVWKIGIHLEYNKLERREIERAIKGLMVETKGQGMRQRSVSLK 232
>gb|BP935319.1|BP935319 BP935319 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-076_B15.r 3', mRNA sequence
Length = 640
Score = 149 bits (321), Expect = 1e-035
Identities = 61/115 (53%), Positives = 79/115 (68%)
Frame = -2 / -3
Query: 728 SGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPR 549
S +LPDG + V RG +V WAPQ++VLAHPA GGF THNGWNST+E+I EGVPM+C P
Sbjct: 581 SESLPDGFLEMVGKRGYIVKWAPQQQVLAHPATGGFWTHNGWNSTLESICEGVPMICQPF 402
Query: 548 HGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
GDQ N RYV DVWK+G L +LER +++ AI L +G+ +++R K
Sbjct: 401 FGDQRVNARYVSDVWKIGIHLEYNKLERREIERAIKGLMVETKGQGMRQRSVSLK 237
>gb|BP932015.1|BP932015 BP932015 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-030_L18.r 3', mRNA sequence
Length = 574
Score = 148 bits (317), Expect = 5e-035
Identities = 60/115 (52%), Positives = 79/115 (68%)
Frame = -2 / -2
Query: 728 SGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPR 549
S +LPDG + + RG +V WAPQ++VLAHPA GGF THNGWNST+E+I EGVPM+C P
Sbjct: 573 SESLPDGFLEMLVKRGYIVKWAPQQQVLAHPATGGFWTHNGWNSTLESICEGVPMICQPF 394
Query: 548 HGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
GDQ N RYV DVWK+G L +LER +++ AI L +G+ +++R K
Sbjct: 393 FGDQRVNARYVSDVWKIGIHLEYNKLERREIERAIKGLMVETKGQGMRQRSVSLK 229
>gb|CK091254.1|CK091254 F066P42.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F066P42 3', mRNA sequence
Length = 782
Score = 130 bits (279), Expect(3) = 1e-033
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = -2 / -1
Query: 719 LPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGD 540
LP+G +++ GR +V WAPQ EVLAHPAVG F THNGWNST+E+I EGVPM+C P D
Sbjct: 500 LPNGFLEDLNGRAHIVKWAPQSEVLAHPAVGAFWTHNGWNSTLESICEGVPMICMPCFTD 321
Query: 539 QFGNMRYVCDVWKVGTEL 486
Q N RYV DVW+VG +L
Sbjct: 320 QMANARYVSDVWRVGMQL 267
Score = 28.1 bits (55), Expect(3) = 1e-033
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2 / -1
Query: 473 LERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
LER ++++ I+RL +EGE I++ + K
Sbjct: 257 LERAKIESTINRLLVDEEGEAIRKGILSLK 168
Score = 22.6 bits (43), Expect(3) = 1e-033
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -1
Query: 773 PLRVVVRPNLIRGFE 729
P VVRP L+RG E
Sbjct: 557 PFLWVVRPGLVRGAE 513
>gb|DT477027.1|DT477027 WS01231.B21_L09 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_L09 3', mRNA sequence
Length = 925
Score = 115 bits (246), Expect(3) = 3e-031
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = -2 / -3
Query: 722 ALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHG 543
+LP+ + V RG +V WAPQ+EVLAH AVGGF +H GWNST+E+ISEGVPM+C P G
Sbjct: 548 SLPEDFREIVGERGCIVKWAPQKEVLAHSAVGGFWSHCGWNSTLESISEGVPMICKPCFG 369
Query: 542 DQFGNMRYVCDVWKVGTEL 486
DQ N RY VW +G +L
Sbjct: 368 DQRVNARYASYVWGIGLQL 312
Score = 32.2 bits (64), Expect(3) = 3e-031
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2 / -3
Query: 476 QLERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
+LER +++ AI RL EGEE++ + K K
Sbjct: 305 KLERKEIERAIRRLMVDSEGEEMRHKAKNLK 213
Score = 29.5 bits (58), Expect(3) = 3e-031
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3 / -2
Query: 91 CTIVLTFMFLTASWNKTRLVSKKKKK 14
C ++L FL S K+ L SKKKKK
Sbjct: 78 CVLLLLLSFLLTS*KKSSLGSKKKKK 1
>gb|BP934618.1|BP934618 BP934618 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-067_H11.r 3', mRNA sequence
Length = 656
Score = 118 bits (253), Expect(2) = 1e-029
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = -2 / -3
Query: 722 ALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHG 543
+LP+G + V RG +V WAPQ+EVLAH AVGGF +H GWNST+E+ISEGVPM+C P G
Sbjct: 483 SLPEGFREIVGERGCIVKWAPQKEVLAHAAVGGFWSHCGWNSTLESISEGVPMICKPCFG 304
Query: 542 DQFGNMRYVCDVWKVGTEL 486
DQ N RY VW +G +L
Sbjct: 303 DQRVNARYASYVWGIGLQL 247
Score = 30.9 bits (61), Expect(2) = 1e-029
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 476 QLERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
+LER + + AI RL EGEE++ + K K
Sbjct: 240 RLERKETERAIRRLMVDSEGEEMRHKAKNLK 148
>gb|BU891342.1|BU891342 P048H10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 532
Score = 127 bits (271), Expect = 1e-028
Identities = 52/120 (43%), Positives = 74/120 (61%)
Frame = -2 / +2
Query: 719 LPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGD 540
LPDG D +G++V W PQ EVLAH AVG F+TH GWNS +E+I+ GVPM+C P GD
Sbjct: 59 LPDGFLDRTTSQGLLVPWTPQSEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPFFGD 238
Query: 539 QFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIAAAKGIG 360
Q N R V D WK+G ++ + V ++D++ GE+++E ++ + A K IG
Sbjct: 239 QRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLDKVLSQDSGEKMRENIRALQQLAKKAIG 418
>gb|CV244301.1|CV244301 WS0254.B21_E14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0254_E14 3', mRNA sequence
Length = 862
Score = 125 bits (268), Expect = 3e-028
Identities = 52/120 (43%), Positives = 74/120 (61%)
Frame = -2 / -3
Query: 719 LPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGD 540
LP+G D +G++V W PQ EVLAH AVG F+TH GWNS +E+I+ GVPM+C P GD
Sbjct: 494 LPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPFFGD 315
Query: 539 QFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIAAAKGIG 360
Q N R V D WK+G ++ + V ++D++ GEE++E ++ + A K IG
Sbjct: 314 QRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLDKVLSQDSGEEMRENIRALQQLAKKAIG 135
>gb|CV245380.1|CV245380 WS0257.B21_E04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0257_E04 3', mRNA sequence
Length = 835
Score = 125 bits (268), Expect = 3e-028
Identities = 52/120 (43%), Positives = 74/120 (61%)
Frame = -2 / -3
Query: 719 LPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGD 540
LP+G D +G++V W PQ EVLAH AVG F+TH GWNS +E+I+ GVPM+C P GD
Sbjct: 494 LPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPFFGD 315
Query: 539 QFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIAAAKGIG 360
Q N R V D WK+G ++ + V ++D++ GEE++E ++ + A K IG
Sbjct: 314 QRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLDKVLSQDSGEEMRENIRALQQLAKKAIG 135
>gb|DN490532.1|DN490532 UL60PB12.3pR Populus cold stressed leaves cDNA library Populus
tremula x Populus tremuloides cDNA clone UL60PB12 3',
mRNA sequence
Length = 612
Score = 125 bits (268), Expect = 3e-028
Identities = 52/118 (44%), Positives = 68/118 (57%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP DE + RG + W PQEEVL HP++GGFLTH+GWNS E+IS GVPM+C P
Sbjct: 466 DSAILPPEFTDETKDRGFISNWCPQEEVLNHPSIGGFLTHSGWNSIAESISSGVPMLCLP 287
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIA 378
GDQ N RY C+ W +G E+ K + + G K K+ M+ K+A
Sbjct: 286 FFGDQQTNCRYTCNEWGIGMEIDSNAERDKMEKLVRELMEGEKGKSMKKKAMEWKKLA 113
>gb|DT489381.1|DT489381 WS02542.B21_B04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_B04 3', mRNA sequence
Length = 937
Score = 125 bits (268), Expect = 3e-028
Identities = 52/120 (43%), Positives = 74/120 (61%)
Frame = -2 / -3
Query: 719 LPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGD 540
LP+G D +G++V W PQ EVLAH AVG F+TH GWNS +E+I+ GVPM+C P GD
Sbjct: 494 LPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPFFGD 315
Query: 539 QFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIAAAKGIG 360
Q N R V D WK+G ++ + V ++D++ GEE++E ++ + A K IG
Sbjct: 314 QRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLDKVLSQDSGEEMRENIRALQQLAKKAIG 135
>gb|DT492065.1|DT492065 WS02549.C21_J03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02549_J03 3', mRNA sequence
Length = 844
Score = 125 bits (268), Expect = 3e-028
Identities = 52/120 (43%), Positives = 74/120 (61%)
Frame = -2 / -3
Query: 719 LPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGD 540
LP+G D +G++V W PQ EVLAH AVG F+TH GWNS +E+I+ GVPM+C P GD
Sbjct: 494 LPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPFFGD 315
Query: 539 QFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIAAAKGIG 360
Q N R V D WK+G ++ + V ++D++ GEE++E ++ + A K IG
Sbjct: 314 QRLNGRMVEDAWKIGLQVEDGVFRKHGVLNSLDKVLSQDSGEEMRENIRALQQLAKKAIG 135
>gb|DN500518.1|DN500518 UL60PB12.5pR Populus cold stressed leaves cDNA library Populus
tremula x Populus tremuloides cDNA clone UL60PB12 5',
mRNA sequence
Length = 733
Score = 123 bits (264), Expect = 1e-027
Identities = 45/82 (54%), Positives = 56/82 (68%)
Frame = -2 / +1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP DE + RG + W PQEEVL HP++GGFLTH+GWNS E+IS GVPM+C P
Sbjct: 286 DSAILPPEFTDETKDRGFISNWCPQEEVLNHPSIGGFLTHSGWNSIAESISSGVPMLCLP 465
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
GDQ N RY C+ W +G E+
Sbjct: 466 FFGDQQTNCRYTCNEWGIGMEI 531
>gb|CK100898.1|CK100898 F007P86.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F007P86 5', mRNA sequence
Length = 624
Score = 121 bits (258), Expect = 7e-027
Identities = 50/120 (41%), Positives = 77/120 (64%)
Frame = -2 / -3
Query: 719 LPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGD 540
LP G D +G+VV W+PQ EVLAH AVG F+TH GWNS +E+I+ GVPM+C P GD
Sbjct: 511 LPHGFLDRTTSQGLVVPWSPQLEVLAHRAVGVFVTHCGWNSLLESIAGGVPMICRPFFGD 332
Query: 539 QFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIAAAKGIG 360
Q N R + DVW++G ++ + +V +++++ + G++++E ++ K A K IG
Sbjct: 331 QRLNGRMIEDVWEIGLKVEDGVFTKLEVLNSLNKILSHEGGQKMRENIRALKQLAKKAIG 152
>gb|CV240642.1|CV240642 WS0251.B21_P03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_P03 3', mRNA sequence
Length = 845
Score = 121 bits (258), Expect = 7e-027
Identities = 50/118 (42%), Positives = 69/118 (58%)
Frame = -2 / -2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP +E + R + +W PQEEVL HP+VGGFLTH GW ST+E+IS GVPM+C P
Sbjct: 658 DSAILPPEFTEETKDRCFISSWCPQEEVLDHPSVGGFLTHCGWGSTIESISSGVPMLCWP 479
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIA 378
GDQ N RY C+ W +G E+ K + + G + + K+ M+ K+A
Sbjct: 478 SFGDQQTNCRYACNEWAIGMEIDSNVTRENVEKQVRELMEGEEGKKMKKKAMEWKKLA 305
>gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_J17 3', mRNA sequence
Length = 777
Score = 119 bits (255), Expect = 2e-026
Identities = 51/114 (44%), Positives = 66/114 (57%)
Frame = -2 / -3
Query: 719 LPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGD 540
LP +E + RG + +W PQEEVL HP+VGGFLTH GW S +E+IS GVPM+C P GD
Sbjct: 544 LPPEFTEETKDRGFICSWCPQEEVLNHPSVGGFLTHCGWTSIIESISSGVPMLCWPFAGD 365
Query: 539 QFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFKIA 378
Q N RY C W +G E+ K + + G K E K+ M+ K+A
Sbjct: 364 QQTNCRYTCTEWGIGMEIDSNVTRDKVEKIVREFMEGEKAKEMKKKAMEWKKLA 203
>gb|CA927209.1|CA927209 MTU6CR.P6.C10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 492
Score = 118 bits (253), Expect = 3e-026
Identities = 45/82 (54%), Positives = 54/82 (65%)
Frame = -2 / -1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E RG + +W PQEEVL HPAVGGFLTH+GW ST+E++ GVPM C P
Sbjct: 375 ESAVLPAEFAEETEKRGFITSWCPQEEVLNHPAVGGFLTHSGWGSTIESLCAGVPMACWP 196
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
DQ N RY C+ W VG E+
Sbjct: 195 FFADQAMNCRYSCNEWGVGMEI 130
>gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_G13 3', mRNA sequence
Length = 883
Score = 117 bits (251), Expect = 6e-026
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S P E + RG + +W PQEEVL+HP++GGF+TH GW ST+E+IS GVPM+C P
Sbjct: 635 DSPIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWP 456
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
GDQ N RY C W +G E+
Sbjct: 455 SFGDQQTNCRYTCTEWGIGMEI 390
>gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_A16 3', mRNA sequence
Length = 879
Score = 117 bits (251), Expect = 6e-026
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = -2 / -2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S P E + RG + +W PQEEVL+HP++GGF+TH GW ST+E+IS GVPM+C P
Sbjct: 653 DSPIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWP 474
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
GDQ N RY C W +G E+
Sbjct: 473 SFGDQQTNCRYTCTEWGIGMEI 408
>gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_M10 3', mRNA sequence
Length = 887
Score = 117 bits (251), Expect = 6e-026
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = -2 / -1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S P E + RG + +W PQEEVL+HP++GGF+TH GW ST+E+IS GVPM+C P
Sbjct: 653 DSPIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWP 474
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
GDQ N RY C W +G E+
Sbjct: 473 SFGDQQTNCRYTCTEWGIGMEI 408
>gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_F21 3', mRNA sequence
Length = 844
Score = 117 bits (251), Expect = 6e-026
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S P E + RG + +W PQEEVL+HP++GGF+TH GW ST+E+IS GVPM+C P
Sbjct: 653 DSPIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWP 474
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
GDQ N RY C W +G E+
Sbjct: 473 SFGDQQTNCRYTCTEWGIGMEI 408
>gb|CV229269.1|CV229269 WS01912.B21_M05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01912_M05 3', mRNA sequence
Length = 759
Score = 116 bits (247), Expect = 2e-025
Identities = 43/82 (52%), Positives = 54/82 (65%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E RG + +W PQEEVL HPAVGGFLTH+GW ST+E++ G+P+ C P
Sbjct: 586 ESAVLPAEFAEETEKRGFITSWCPQEEVLNHPAVGGFLTHSGWGSTIESLCAGLPLACWP 407
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
DQ N RY C+ W VG E+
Sbjct: 406 FFADQAMNCRYSCNEWGVGMEI 341
>gb|CK102642.1|CK102642 G085P75.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G085P75 5', mRNA sequence
Length = 476
Score = 114 bits (244), Expect = 6e-025
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP+ +++ GRG++ +W PQ++VLAHP+VG FLTH GWNS +E IS GVP++C P
Sbjct: 180 DSAILPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNSMMETISSGVPVICWP 359
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
DQ N RY C W +G E+
Sbjct: 360 FFADQQPNCRYACTKWGIGVEV 425
>gb|BP930106.1|BP930106 BP930106 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-005_O07.r 3', mRNA sequence
Length = 598
Score = 113 bits (241), Expect = 2e-024
Identities = 43/82 (52%), Positives = 53/82 (64%)
Frame = -2 / -2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP + E + RG V +W PQEEVL HP+VGGFLTH GWNS +E++ GVP++C P
Sbjct: 555 ESAILPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWP 376
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
DQ N Y C W VG E+
Sbjct: 375 LFADQTINCSYACIEWGVGMEI 310
>gb|DN489285.1|DN489285 T020F04.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T020F04 3', mRNA sequence
Length = 657
Score = 113 bits (241), Expect = 2e-024
Identities = 46/110 (41%), Positives = 66/110 (60%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E R RG++ +W QE+VL H ++GGFL+H GWNST+E++S GVPM+C P
Sbjct: 475 ESAVLPPEFLEETRERGLMASWCAQEKVLKHSSIGGFLSHMGWNSTIESLSNGVPMLCWP 296
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKE 402
+Q N ++ C W VG E+ + K I+ + G K+ E KE
Sbjct: 295 FFSEQQTNCKFACVDWGVGMEIESDANRDEVEKLVIELIDGEKDKEMQKE 146
>gb|DT476446.1|DT476446 WS01229.B21_J24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_J24 3', mRNA sequence
Length = 748
Score = 110 bits (234), Expect(2) = 2e-024
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = -2 / -2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP+ +++ GRG++ +W PQ++VLAHP+VG FLTH GWN +E IS GVP++C P
Sbjct: 675 DSAILPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNFMMETISCGVPVICWP 496
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
DQ N RY C W +G E+
Sbjct: 495 FFADQQPNCRYACTKWGIGVEV 430
Score = 24.9 bits (48), Expect(2) = 2e-024
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 85 IVLTFMFLTASWNKTRLVSKKKKK 14
+V +F + A + L+SKKKKK
Sbjct: 100 VVFSFKYFPALTSMASLLSKKKKK 29
>gb|CX178016.1|CX178016 G09_45-81_13.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 665
Score = 112 bits (240), Expect = 2e-024
Identities = 44/90 (48%), Positives = 56/90 (62%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP + E + RG V +W PQEEVL HP+VGGFLTH GWNS +E++ GVP++C P
Sbjct: 303 ESAILPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWP 124
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERG 462
DQ N Y C W VG ++ + E G
Sbjct: 123 LFADQPINCSYACIEWGVGMQIDNPRAEFG 34
>gb|CX180397.1|CX180397 C08_45-107_06.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 650
Score = 112 bits (240), Expect = 2e-024
Identities = 44/90 (48%), Positives = 56/90 (62%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP + E + RG V +W PQEEVL HP+VGGFLTH GWNS +E++ GVP++C P
Sbjct: 285 ESAILPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWP 106
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERG 462
DQ N Y C W VG ++ + E G
Sbjct: 105 LFADQPINCSYACIEWGVGMQIDNPRAEFG 16
>gb|CX180523.1|CX180523 A03_45-107_01.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 647
Score = 112 bits (240), Expect = 2e-024
Identities = 44/90 (48%), Positives = 56/90 (62%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP + E + RG V +W PQEEVL HP+VGGFLTH GWNS +E++ GVP++C P
Sbjct: 285 ESAILPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWP 106
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERG 462
DQ N Y C W VG ++ + E G
Sbjct: 105 LFADQPINCSYACIEWGVGMQIDNPRAEFG 16
>gb|CX183741.1|CX183741 A09_45-83_01.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 666
Score = 112 bits (240), Expect = 2e-024
Identities = 44/90 (48%), Positives = 56/90 (62%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP + E + RG V +W PQEEVL HP+VGGFLTH GWNS +E++ GVP++C P
Sbjct: 304 ESAILPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWP 125
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERG 462
DQ N Y C W VG ++ + E G
Sbjct: 124 LFADQPINCSYACIEWGVGMQIDNPRAEFG 35
>gb|BP933703.1|BP933703 BP933703 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-055_H03.r 3', mRNA sequence
Length = 597
Score = 112 bits (240), Expect = 2e-024
Identities = 43/82 (52%), Positives = 53/82 (64%)
Frame = -2 / -1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP + E + RG V +W PQEEVL HP+VGGFLTH GWNS +E++ GVP++C P
Sbjct: 552 ESXILPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWP 373
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
DQ N Y C W VG E+
Sbjct: 372 LFADQTINCSYACIEWGVGMEI 307
>gb|DT512707.1|DT512707 WS02420.B21_A09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_A09 3', mRNA sequence
Length = 848
Score = 112 bits (240), Expect = 2e-024
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = -2 / -1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP+ +++ GRG++ +W PQ++VLAHP+VG FLTH GWNS +E IS GVP++C P
Sbjct: 647 DSAILPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNSMMETISCGVPVICWP 468
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
DQ N RY C W +G E+
Sbjct: 467 FFADQQPNCRYACTKWGIGVEV 402
>gb|CV255664.1|CV255664 WS02414.B21_K19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02414_K19 3', mRNA sequence
Length = 723
Score = 111 bits (238), Expect = 4e-024
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = -2 / -1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP + RG+ +W QE+VL+HP++GGFLTHNGWNST+E+I GVPM+C P
Sbjct: 603 DSAMLPPEFVSATKERGLFASWCSQEQVLSHPSIGGFLTHNGWNSTIESICGGVPMICWP 424
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N RY C W +G E+
Sbjct: 423 FFAEQQTNCRYCCTEWGIGMEI 358
>gb|CV257201.1|CV257201 WS0245.B21_P10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_P10 3', mRNA sequence
Length = 815
Score = 111 bits (238), Expect = 4e-024
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = -2 / -2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP + RG+ +W QE+VL+HP++GGFLTHNGWNST+E+I GVPM+C P
Sbjct: 601 DSAMLPPEFVSATKERGLFASWCSQEQVLSHPSIGGFLTHNGWNSTIESICGGVPMICWP 422
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N RY C W +G E+
Sbjct: 421 FFAEQQTNCRYCCTEWGIGMEI 356
>gb|DT516411.1|DT516411 WS02431.B21_E19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02431_E19 3', mRNA sequence
Length = 802
Score = 111 bits (238), Expect = 4e-024
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = -2 / -3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP + RG+ +W QE+VL+HP++GGFLTHNGWNST+E+I GVPM+C P
Sbjct: 602 DSAMLPPEFVSATKERGLFASWCSQEQVLSHPSIGGFLTHNGWNSTIESICGGVPMICWP 423
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N RY C W +G E+
Sbjct: 422 FFAEQQTNCRYCCTEWGIGMEI 357
>gb|CA933833.1|CA933833 MTU3TS.P13.C08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 691
Score = 110 bits (235), Expect = 1e-023
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = -2 / -2
Query: 737 GFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVC 558
G + LPDG + RG VV W+PQE+VLAHP+V F+TH GWNST+EA++ G+P+V
Sbjct: 606 GHDLPVLPDGFSKKAGDRGNVVRWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVA 427
Query: 557 CPRHGDQFGNMRYVCDVWKVGTEL 486
P+ GDQ N +Y+ D++KVG +
Sbjct: 426 FPQLGDQVTNAKYLVDIFKVGVRM 355
>gb|CF119369.1|CF119369 MTU10CS.P16.H11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 698
Score = 110 bits (235), Expect = 1e-023
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = -2 / +3
Query: 737 GFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVC 558
G + LPDG + RG VV W+PQE+VLAHP+V F+TH GWNST+EA++ G+P+V
Sbjct: 96 GHDLPVLPDGFSKKAGDRGNVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVA 275
Query: 557 CPRHGDQFGNMRYVCDVWKVGTEL 486
P+ GDQ N +Y+ D++KVG +
Sbjct: 276 FPQLGDQVTNAKYLVDIFKVGVRM 347
>gb|CF119771.1|CF119771 MTU10CS.P6.B05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 612
Score = 110 bits (235), Expect = 1e-023
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = -2 / -1
Query: 737 GFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVC 558
G + LPDG + RG VV W+PQE+VLAHP+V F+TH GWNST+EA++ G+P+V
Sbjct: 603 GHDLPVLPDGFSKKAGDRGNVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVA 424
Query: 557 CPRHGDQFGNMRYVCDVWKVGTEL 486
P+ GDQ N +Y+ D++KVG +
Sbjct: 423 FPQLGDQVTNAKYLVDIFKVGVRM 352
>gb|CX177292.1|CX177292 G05_69-104_13.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 577
Score = 110 bits (235), Expect = 1e-023
Identities = 45/113 (39%), Positives = 67/113 (59%)
Frame = -2 / +1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
ES LP +E R RG++ +W QE+VL H ++GGFL+H GWNST+E++S GVPM+C P
Sbjct: 22 ESAVLPPEFLEETRERGLMASWCAQEKVLKHSSIGGFLSHMGWNSTIESLSNGVPMLCWP 201
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMK 393
+Q N ++ C W VG E+ + K I+ + G K E ++ M+
Sbjct: 202 FFSEQQTNCKFACVDWGVGMEIESDANRDEVEKLVIELIDGEKGKEMKRKAME 360
>gb|DN488894.1|DN488894 S050D08.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S050D08 3', mRNA sequence
Length = 394
Score = 110 bits (235), Expect = 1e-023
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -2 / -1
Query: 701 DEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCPRHGDQFGNMR 522
+E + RG + +W PQEEVL HP+VGGFLTH GW S +E+IS GVPM+C P GDQ N R
Sbjct: 394 EETKDRGFICSWCPQEEVLNHPSVGGFLTHCGWTSIIESISSGVPMLCWPFAGDQQTNCR 215
Query: 521 YVCDVWKVG 495
Y C W +G
Sbjct: 214 YTCTEWGIG 188
>gb|CN520132.1|CN520132 GQ0106.B3_K07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0106_K07 5', mRNA sequence
Length = 817
Score = 109 bits (233), Expect = 2e-023
Identities = 43/119 (36%), Positives = 73/119 (61%)
Frame = -2 / +3
Query: 740 RGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMV 561
RG LP+ + + +G VV+W PQ +VL H A+G F+TH+GWNS +++I+ VPM+
Sbjct: 294 RGNPKEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMI 473
Query: 560 CCPRHGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
C P GDQ N R + VW G E+ G ++ +G + A+ + T EG +++++++ +
Sbjct: 474 CRPFFGDQTVNTRTIEAVWGTGLEIEGGRITKGGLMKALRLIMSTDEGNKMRKKLQHLQ 650
>gb|AJ772854.1|AJ772854 AJ772854 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000200001D04F1, mRNA sequence
Length = 671
Score = 109 bits (233), Expect = 2e-023
Identities = 42/103 (40%), Positives = 61/103 (59%)
Frame = -2 / +3
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP +E R RG+ +W QE+VL H ++GGFL+H GWNST+E++S GVPM+C P
Sbjct: 318 DSAVLPPEFREETRERGLTASWCAQEKVLKHSSIGGFLSHMGWNSTIESLSNGVPMLCWP 497
Query: 551 RHGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTK 423
+Q N ++ C W VG E+ + K I+ + G K
Sbjct: 498 FFSEQQTNCKFACTDWDVGMEIESDANRDEVEKLVIELMDGEK 626
>gb|CV236341.1|CV236341 WS01223.B21_M04 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_M04 3', mRNA sequence
Length = 838
Score = 109 bits (233), Expect = 2e-023
Identities = 43/119 (36%), Positives = 73/119 (61%)
Frame = -2 / -1
Query: 740 RGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMV 561
RG LP+ + + +G VV+W PQ +VL H A+G F+TH+GWNS +++I+ VPM+
Sbjct: 694 RGNPKEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMI 515
Query: 560 CCPRHGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
C P GDQ N R + VW G E+ G ++ +G + A+ + T EG +++++++ +
Sbjct: 514 CRPFFGDQTVNTRTIEAVWGTGLEIEGGRITKGGLMKALRLIMSTDEGNKMRKKLQHLQ 338
>gb|CV282585.1|CV282585 WS0185.B21_A14 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0185_A14 3', mRNA sequence
Length = 848
Score = 109 bits (233), Expect = 2e-023
Identities = 43/119 (36%), Positives = 73/119 (61%)
Frame = -2 / -1
Query: 740 RGFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMV 561
RG LP+ + + +G VV+W PQ +VL H A+G F+TH+GWNS +++I+ VPM+
Sbjct: 701 RGNPKEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMI 522
Query: 560 CCPRHGDQFGNMRYVCDVWKVGTELVGEQLERGQVKAAIDRLFGTKEGEEIKERMKEFK 384
C P GDQ N R + VW G E+ G ++ +G + A+ + T EG +++++++ +
Sbjct: 521 CRPFFGDQTVNTRTIEAVWGTGLEIEGGRITKGGLMKALRLIMSTDEGNKMRKKLQHLQ 345
>gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_H12 3', mRNA sequence
Length = 887
Score = 109 bits (233), Expect = 2e-023
Identities = 44/79 (55%), Positives = 55/79 (69%)
Frame = -2 / -1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
E G +P+G +EV +G+VV W+PQ +VLA+ AVG F TH GWNST+EA+S GVPMV P
Sbjct: 590 EKGKIPEGFVEEVENKGLVVNWSPQVKVLANEAVGCFFTHCGWNSTIEALSLGVPMVTMP 411
Query: 551 RHGDQFGNMRYVCDVWKVG 495
DQ N + V D WKVG
Sbjct: 410 GWSDQQTNSKLVEDAWKVG 354
>gb|CV258292.1|CV258292 WS0249.B21_B21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0249_B21 3', mRNA sequence
Length = 692
Score = 109 bits (232), Expect = 3e-023
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = -2 / -2
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
+S LP + RG+ +W QE+VL+HP++GGFLTHNGWNS +E+I GVPM+C P
Sbjct: 598 DSAMLPPEFVSATKERGLFASWCSQEQVLSHPSIGGFLTHNGWNSPIESICGGVPMICWP 419
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
+Q N RY C W +G E+
Sbjct: 418 FFAEQQTNCRYCCPEWGIGMEI 353
>gb|CX178075.1|CX178075 G12_45-100_14.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 653
Score = 109 bits (232), Expect = 3e-023
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = -2 / +1
Query: 731 ESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVCCP 552
E+ LP E + R ++V+W PQE+VL HP++GGFL+H GWNST+E+I GVPMVC P
Sbjct: 202 EAAMLPPEFLSETKDRSLLVSWCPQEQVLKHPSIGGFLSHMGWNSTLESICGGVPMVCWP 381
Query: 551 RHGDQFGNMRYVCDVWKVGTEL 486
G+Q N + C W +G E+
Sbjct: 382 FFGEQQTNCWFACTKWGIGMEI 447
>gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 903
Score = 108 bits (231), Expect = 4e-023
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = -2 / +2
Query: 737 GFESGALPDGVEDEVRGRGIVVTWAPQEEVLAHPAVGGFLTHNGWNSTVEAISEGVPMVC 558
G++ LPDG ++ RG VV W+PQE+VLAHP+V F+TH GWNS++EA++ G+P+V
Sbjct: 470 GYDLLVLPDGFLEKAGDRGKVVQWSPQEKVLAHPSVACFVTHCGWNSSMEALTSGMPVVA 649
Query: 557 CPRHGDQFGNMRYVCDVWKVGTEL 486
P+ GDQ N +Y+ D+ KVG +
Sbjct: 650 FPQWGDQVTNAKYLVDILKVGVRM 721
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 305,161,264
Number of Sequences: 369679
Number of extensions: 3533548
Number of successful extensions: 37838
Number of sequences better than 1.0e-020: 68
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 9958813900
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)