TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430806.2.1
(1380 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN550582.1|CN550582 GQ0241.B3_I24 GQ024 Populus trichoca... 433 e-120
gb|DT519199.1|DT519199 WS02440.B21_K05 PTxD-ICC-N-A-14 Popu... 294 7e-079
gb|CV257325.1|CV257325 WS0246.B21_F06 PTxD-ICC-N-A-14 Popul... 283 2e-075
gb|CV245669.1|CV245669 WS0259.B21_B01 PT-MB-N-A-15 Populus ... 274 3e-074
gb|CA927167.1|CA927167 MTU6CR.P5.G08 Aspen root cDNA Librar... 221 1e-068
gb|DV466552.1|DV466552 MTUNUL1.P7.B05 NUL Populus fremontii... 107 3e-063
gb|CX654864.1|CX654864 PO01002C07 Poplar SC cDNA library Po... 106 2e-057
gb|CX660316.1|CX660316 PO01021C08 Poplar SC cDNA library Po... 106 1e-055
gb|AJ780354.1|AJ780354 AJ780354 Populus euphratica leaf 3-6... 185 2e-052
gb|DN490136.1|DN490136 UB29DPH05.3pR Populus active cambium... 106 8e-042
gb|BU831213.1|BU831213 T019A02 Populus apical shoot cDNA li... 108 5e-037
gb|CN521126.1|CN521126 GQ0106.B3_N14 GQ010 Populus trichoca... 82 2e-034
gb|AI166473.1|AI166473 xylem.est.301 Poplar xylem Lambda ZA... 107 6e-034
gb|CN520175.1|CN520175 GQ0105.B3_J15 GQ010 Populus trichoca... 142 6e-033
gb|DN501562.1|DN501562 V005B02.5pR Populus male catkins cDN... 109 2e-032
gb|AJ770047.1|AJ770047 AJ770047 Populus euphratica leaf 3-6... 130 2e-029
gb|DN491586.1|DN491586 V005B02.3pR Populus male catkins cDN... 88 9e-028
gb|BI130614.1|BI130614 G108P23Y Populus cambium cDNA librar... 90 2e-027
gb|CK103215.1|CK103215 G108P23.5pR Populus tension wood cDN... 123 3e-027
gb|CX171034.1|CX171034 E05_69-24_09.ab1 leaf inoculated wit... 111 1e-023
>gb|CN550582.1|CN550582 GQ0241.B3_I24 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_I24 5', mRNA sequence
Length = 808
Score = 433 bits (939), Expect = e-120
Identities = 172/216 (79%), Positives = 190/216 (87%)
Frame = +2 / +2
Query: 527 FGSRLKRNVFRGSWMPRGDALKKLEEKGVAIRFVIGRSANRGDSLDRNIDDENRQTKDFL 706
FGS LKR VFRGSWMPRGDALKKLEE+GV IRFVIGRSANRGDSLDRNID ENR TKDFL
Sbjct: 2 FGSHLKRKVFRGSWMPRGDALKKLEERGVVIRFVIGRSANRGDSLDRNIDGENRSTKDFL 181
Query: 707 ILESHEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLY 886
I+ HEEA EELP K K FFS AV+ WDAEFYVKV+DNINLDL GLIE+LE RR Y
Sbjct: 182 IIVGHEEAQEELPKKVKYFFSTAVQTWDAEFYVKVDDNINLDLEGLIELLEHRRRQDSAY 361
Query: 887 MGCMKSGMVISEEGQQWYEPEWWKFGDSKTYFRHASGSLFILSKNLARYININSASLQSY 1066
+GCMKSG V++EEG+ WYEPEWWKFGD K+YFRHASGSL ILSKNLARYI+INSASL+SY
Sbjct: 362 IGCMKSGEVVTEEGKPWYEPEWWKFGDEKSYFRHASGSLLILSKNLARYIDINSASLRSY 541
Query: 1067 AHDDISVGSWMMGLNATYVDDDRLCCSSSRQEKICS 1174
AHDDISVGSWMMG+ ATY+DD+RLCCSS +Q+K+CS
Sbjct: 542 AHDDISVGSWMMGVQATYIDDNRLCCSSIKQDKVCS 649
Score = 219 bits (473), Expect = 3e-056
Identities = 95/219 (43%), Positives = 144/219 (65%)
Frame = -3 / -1
Query: 1183 SSIGTDFLLSGTAAAQPVIIHVSCIQSHHP*TY*YIIVCITLQ*RTIYVDVASQIF*EDK 1004
SS GT+ +L AA+ V++++ C+ +HHP ++*YI++ +T + T+YV++ SQIF E K
Sbjct: 658 SSQGTNLVLFNATAAKTVVVYIGCLDTHHPRSH*YIVMSVTPKRCTVYVNIPSQIFGEYK 479
Query: 1003 QRTRSVSKIRF*ISKFPPLRFIPLLALFTYDHP*FHTTHVQSLATSTAFEHLN*PS*VKI 824
+ TR +SK+RF ISKFPP R IP LF+Y+ HT +V ++ ++T F+ N*P +K+
Sbjct: 478 KGTRCMSKVRFFISKFPPFRLIPWFTLFSYNFSRLHTANVSTILSATVFKKFN*PLKIKV 299
Query: 823 NVIFNFDIKFCIPGFNCSTEENFCFAR*FFCSLFMTFKNQEVLCLPIFIINITVQAITSI 644
+++ NF IKF IP + S +E F FF SL MT+ NQE+LC IF ++I++ AI SI
Sbjct: 298 DIVINFYIKFRIPCLHRSAKEVLHFLGQFFLSLLMTYNNQEILC*TIFTVDISI*AIPSI 119
Query: 643 CTPTNNKTNSYTLFLKLLQSITSWHPGATEDVPLETGAK 527
T N+KT Y+ FLK I+S HP ++ +PL+ K
Sbjct: 118 STAANHKTYHYSSFLKFF*GISSRHPRPSKHLPLQVTTK 2
Score = 156 bits (335), Expect(2) = 4e-061
Identities = 70/101 (69%), Positives = 77/101 (76%)
Frame = -1 / -2
Query: 1188 SAQALEQIFSCLELLQHNRSSST*VAFSPIIHEPTDISSCA*LCSDALFMLM*RAKFFER 1009
S QA EQ SCL LLQ R SS *VA++PII +PTDISS A*L DALFM + RAKF E
Sbjct: 663 SDQAREQTLSCLMLLQQRRLSSI*VAWTPIIQDPTDISS*A*LLRDALFMSIYRAKFLES 484
Query: 1008 INKEPEACRKYVFESPNFHHSGSYHCWPSSLMTIPDFIQPM 886
I +EP+ACRKY F SPNFHHSGSYH PSS+ T PDFIQPM
Sbjct: 483 IRREPDACRKYDFSSPNFHHSGSYHGLPSSVTTSPDFIQPM 361
Score = 152 bits (326), Expect = 6e-036
Identities = 91/203 (44%), Positives = 105/203 (51%)
Frame = -2 / -3
Query: 1184 LKHWNRFSLVWNCCSTTGHHPRKLHSVPSSMNLLIYHRVHNSAVTHYLC*CSEPNFLRG* 1005
+K N+ LV CS G +L PSS LIY NS H LC +EPNF R *
Sbjct: 659 IKPGNKPCLV*CYCSKDGCRLYRLLGHPSSKIPLIYRHERNS*EMHCLCQYTEPNFWRV* 480
Query: 1004 TKNQKRVENTFLNLQISTTQVHTIVGPLHL*PSLISYNPCTILGYLDGLRASQLTQLSQD 825
NQ VE+T +LQIST Q HT+V PL L SY+ C DG++ QL Q
Sbjct: 479 EGNQMHVESTIFHLQISTIQAHTMVYPLQLQLLQTSYSQCKHYLVCDGVQEVQLAPQDQG 300
Query: 824 *CYLQL*HKILHPRLQLQH*RKFLLCSVILLQPLHDFQESRSPLSADFHHQYYGPSYHLD 645
* QL HKI HP Q *R L ILL+P HD Q SR+PL DFH +Y+ SY LD
Sbjct: 299 *YCHQLLHKIPHPMFAPQC*RSTSLSWAILLEPPHDLQ*SRNPLLNDFHRRYFDLSYPLD 120
Query: 644 LHSDQ*QNE*LHPFPQASSEHHL 576
H Q QN L FPQ H L
Sbjct: 119 *HCGQSQNVSLLLFPQVFLRHLL 51
Score = 103 bits (219), Expect(2) = 4e-061
Identities = 46/61 (75%), Positives = 49/61 (80%)
Frame = -1 / -2
Query: 708 IKKSFVCRFSSSILRSKLSPRFALRPITKRIATPFSSSFFRASPLGIQEPRKTFLLRREP 529
IKKSFV RFS SI RSKLSPR ALRPITKRI TP SSSFF+ASPLGIQ+P TF + P
Sbjct: 183 IKKSFVERFSPSIFRSKLSPRLALRPITKRITTPLSSSFFKASPLGIQDPLNTFRFK*LP 4
Query: 528 N 526
N
Sbjct: 3 N 1
Score = 93.6 bits (198), Expect(2) = 1e-035
Identities = 53/110 (48%), Positives = 67/110 (60%)
Frame = +1 / +1
Query: 844 N*DARRPSR*PRIVHGLYEIRDGHK*RGPTMV*T*VVEIWRFKNVFSTRFWFFVYPLKKF 1023
N* + PS+ +H LYE+ *RG TMV* *+VEIWR K V ST WF Y L+KF
Sbjct: 319 N*TS*TPSQTR*CLHWLYEVWRSCN*RG*TMV*A*MVEIWR*KIVLSTCIWFPSYTLQKF 498
Query: 1024 GSLHQHK*CVTAELCTR*YISRFMDDGTECNLRG**PVVLQQFQTRENLF 1173
GS++ HK C++ EL + YIS +DDG NL P +LQ TR+ LF
Sbjct: 499 GSVY*HKQCIS*ELRS*RYISGILDDGCPSNLYRRQPSLLQ*H*TRQGLF 648
Score = 77.6 bits (163), Expect(2) = 1e-035
Identities = 43/96 (44%), Positives = 59/96 (61%)
Frame = +1 / +1
Query: 526 VWLPSQEERLPWLLDAKR*CSEEA*GKGCSYSFCYWSECKSR**LGP*Y***KSADKGLL 705
+W + E + +LDA R C ++ *GK S +FC W +C SR *L Y *KS +KG L
Sbjct: 1 IW*SLEAEGV*RVLDA*RRCLKKT*GKRSSDTFCDWPQC*SRG*LRSKYRR*KSFNKGFL 180
Query: 706 DS*KS*RGCRRITEQSKNFLQCCS*SLGCRILCQS* 813
D +S* G RRI ++S+ L C ++GC ILC+S*
Sbjct: 181 DYCRS*GGSRRIAQESEVLL*HCGANMGCGILCKS* 288
>gb|DT519199.1|DT519199 WS02440.B21_K05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02440_K05 3', mRNA sequence
Length = 847
Score = 294 bits (637), Expect = 7e-079
Identities = 114/154 (74%), Positives = 130/154 (84%)
Frame = +2 / -2
Query: 713 ESHEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMG 892
E HEEA EELP K K FFS AV+ WDAEFYVK ++NINLDL GLIE+LE RR Y+G
Sbjct: 846 EGHEEAQEELPKKVKSFFSTAVQTWDAEFYVKADNNINLDLEGLIELLEHRRSQASAYIG 667
Query: 893 CMKSGMVISEEGQQWYEPEWWKFGDSKTYFRHASGSLFILSKNLARYININSASLQSYAH 1072
CMKSG VI+EEG WYEPEWWKFGD K+YFRHA+GSL ILSK LARYI+INSASL++YAH
Sbjct: 666 CMKSGEVITEEGSPWYEPEWWKFGDEKSYFRHAAGSLLILSKKLARYIDINSASLKAYAH 487
Query: 1073 DDISVGSWMMGLNATYVDDDRLCCSSSRQEKICS 1174
DD SVGSWMMGL ATY+DD+RLCCSS +Q+K+CS
Sbjct: 486 DDTSVGSWMMGLQATYIDDNRLCCSSIKQDKVCS 385
Score = 147 bits (316), Expect(2) = 5e-040
Identities = 66/99 (66%), Positives = 72/99 (72%)
Frame = -1 / +2
Query: 1182 QALEQIFSCLELLQHNRSSST*VAFSPIIHEPTDISSCA*LCSDALFMLM*RAKFFERIN 1003
QA EQ SCL LLQ R SS *VA+ PII +PTD+SS A* DALFM + RA F E I
Sbjct: 377 QASEQTLSCLMLLQQRRLSSI*VAWRPIIQDPTDVSS*A*AFRDALFMSIYRANFLESIR 556
Query: 1002 KEPEACRKYVFESPNFHHSGSYHCWPSSLMTIPDFIQPM 886
EP ACRKY F SPNFHHSGSYH PSS++T PDFIQPM
Sbjct: 557 SEPAACRKYDFSSPNFHHSGSYHGLPSSVITSPDFIQPM 673
Score = 146 bits (314), Expect = 3e-034
Identities = 65/157 (41%), Positives = 102/157 (64%)
Frame = -3 / +1
Query: 1183 SSIGTDFLLSGTAAAQPVIIHVSCIQSHHP*TY*YIIVCITLQ*RTIYVDVASQIF*EDK 1004
SS+ T+ +L AA+ ++I++ C+++HHP ++* I++ I+L +YV++ S F E K
Sbjct: 376 SSLRTNLVLFNATAAKTIVIYIGCLETHHPGSH*CIVMSISL*RCAVYVNIPS*FFGEYK 555
Query: 1003 QRTRSVSKIRF*ISKFPPLRFIPLLALFTYDHP*FHTTHVQSLATSTAFEHLN*PS*VKI 824
+ T +S++RF ISKFPP RFIP +LF+Y+ FHT +V + T+T F+ N* +K+
Sbjct: 556 K*TSRMSEVRFFISKFPPFRFIPWASLFSYNFSRFHTANVSTSLTATMFKKFN*SLKIKV 735
Query: 823 NVIFNFDIKFCIPGFNCSTEENFCFAR*FFCSLFMTF 713
N++ +F IKF IP + S +E F FF SL MTF
Sbjct: 736 NIVISFYIKFRIPCLHSSAKEGLHFLGQFFLSLLMTF 846
Score = 111 bits (237), Expect = 1e-023
Identities = 68/154 (44%), Positives = 92/154 (59%)
Frame = +1 / -1
Query: 712 *KS*RGCRRITEQSKNFLQCCS*SLGCRILCQS*R*H*S*LSWVN*DARRPSR*PRIVHG 891
*+S* G RRI ++S+ L C ++GC ILC+S* +* * +N* + S+ +H
Sbjct: 847 *RS*GGSRRIAQESEVLL*HCCANMGCGILCKS**QY*P*S*GIN*TS*TSSQSS*CLHW 668
Query: 892 LYEIRDGHK*RGPTMV*T*VVEIWRFKNVFSTRFWFFVYPLKKFGSLHQHK*CVTAELCT 1071
LYEI + *RG MV*T*+VEIWR K V T WF Y L+K S++ HK ++ LC+
Sbjct: 667 LYEIWRSYN*RGKPMV*T*MVEIWR*KIVLPTCGWFTSYTLQKISSVY*HKQRISKGLCS 488
Query: 1072 R*YISRFMDDGTECNLRG**PVVLQQFQTRENLF 1173
YIS +DDG+ NL * +LQ TR+ LF
Sbjct: 487 *RYISGILDDGSPSNLYR*QSSLLQ*H*TRQGLF 386
Score = 38.2 bits (77), Expect(2) = 5e-040
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = -2 / +3
Query: 866 DGLRASQLTQLSQD*CYLQL*HKILHPRLQLQH*RKFLLCSVILLQPLHD 717
D ++ QL Q * QL HKI HP Q *R+ L ILL+P HD
Sbjct: 693 DDVQEVQLIPQDQG*YCYQLLHKIPHPMFAQQC*RRTSLSWAILLEPPHD 842
>gb|CV257325.1|CV257325 WS0246.B21_F06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0246_F06 3', mRNA sequence
Length = 712
Score = 283 bits (612), Expect = 2e-075
Identities = 109/142 (76%), Positives = 125/142 (88%)
Frame = +2 / -2
Query: 749 KAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGCMKSGMVISEEG 928
K K FFS AV+ WDAEFYVKV+DNINLDL GLIE+LE RR Y+GCMKSG V++EEG
Sbjct: 708 KVKYFFSTAVQTWDAEFYVKVDDNINLDLEGLIELLEHRRRQDSAYIGCMKSGEVVTEEG 529
Query: 929 QQWYEPEWWKFGDSKTYFRHASGSLFILSKNLARYININSASLQSYAHDDISVGSWMMGL 1108
+ WYEPEWWKFGD K+YFRHASGSL ILSKNLARYI+INSASL+SYAHDDISVGSWMMG+
Sbjct: 528 KPWYEPEWWKFGDEKSYFRHASGSLVILSKNLARYIDINSASLRSYAHDDISVGSWMMGV 349
Query: 1109 NATYVDDDRLCCSSSRQEKICS 1174
ATY+DD+RLCCSS +Q+K+CS
Sbjct: 348 QATYIDDNRLCCSSIKQDKVCS 283
Score = 156 bits (335), Expect = 3e-037
Identities = 70/101 (69%), Positives = 77/101 (76%)
Frame = -1 / +2
Query: 1188 SAQALEQIFSCLELLQHNRSSST*VAFSPIIHEPTDISSCA*LCSDALFMLM*RAKFFER 1009
S QA EQ SCL LLQ R SS *VA++PII +PTDISS A*L DALFM + RAKF E
Sbjct: 269 SDQAREQTLSCLMLLQQRRLSSI*VAWTPIIQDPTDISS*A*LLRDALFMSIYRAKFLES 448
Query: 1008 INKEPEACRKYVFESPNFHHSGSYHCWPSSLMTIPDFIQPM 886
I +EP+ACRKY F SPNFHHSGSYH PSS+ T PDFIQPM
Sbjct: 449 ITREPDACRKYDFSSPNFHHSGSYHGLPSSVTTSPDFIQPM 571
Score = 154 bits (330), Expect = 2e-036
Identities = 62/141 (43%), Positives = 98/141 (69%)
Frame = -3 / +1
Query: 1183 SSIGTDFLLSGTAAAQPVIIHVSCIQSHHP*TY*YIIVCITLQ*RTIYVDVASQIF*EDK 1004
SS GT+ +L AA+ V++++ C+ +HHP ++*YI++ +T + T+YV++ SQIF E
Sbjct: 274 SSQGTNLVLFNATAAKTVVVYIGCLDTHHPRSH*YIVMSVTPKRCTVYVNIPSQIFGEYN 453
Query: 1003 QRTRSVSKIRF*ISKFPPLRFIPLLALFTYDHP*FHTTHVQSLATSTAFEHLN*PS*VKI 824
+ TR +SK+RF ISKFPP R IP L LF+Y+ HT +V ++ ++T F+ N*P +K+
Sbjct: 454 KGTRCMSKVRFFISKFPPFRLIPWLTLFSYNFSRLHTANVSTILSATVFKKFN*PLKIKV 633
Query: 823 NVIFNFDIKFCIPGFNCSTEE 761
+++ NF IKFCIP + S +E
Sbjct: 634 DIVINFYIKFCIPCLHRSAKE 696
>gb|CV245669.1|CV245669 WS0259.B21_B01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0259_B01
3', mRNA sequence
Length = 844
Score = 274 bits (592), Expect(2) = 3e-074
Identities = 105/148 (70%), Positives = 123/148 (83%)
Frame = +2 / -2
Query: 731 AEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGCMKSGM 910
+ + K K FFS AV+ WDAEFYVK ++NINLDL GLIE+LE RR Y+GCMKSG
Sbjct: 816 SRRIAKKVKSFFSTAVQTWDAEFYVKADNNINLDLEGLIELLEHRRSQASAYIGCMKSGE 637
Query: 911 VISEEGQQWYEPEWWKFGDSKTYFRHASGSLFILSKNLARYININSASLQSYAHDDISVG 1090
VI+EEG WYEPEWWKFGD K+YFRHA+GSL ILSK LARYI+INSASL++YAHDD SVG
Sbjct: 636 VITEEGSPWYEPEWWKFGDEKSYFRHAAGSLLILSKKLARYIDINSASLKAYAHDDTSVG 457
Query: 1091 SWMMGLNATYVDDDRLCCSSSRQEKICS 1174
SWMMGL ATY+DD+RLCCSS +Q+K+CS
Sbjct: 456 SWMMGLQATYIDDNRLCCSSIKQDKVCS 373
Score = 147 bits (316), Expect(2) = 2e-036
Identities = 66/99 (66%), Positives = 72/99 (72%)
Frame = -1 / +2
Query: 1182 QALEQIFSCLELLQHNRSSST*VAFSPIIHEPTDISSCA*LCSDALFMLM*RAKFFERIN 1003
QA EQ SCL LLQ R SS *VA+ PII +PTD+SS A* DALFM + RA F E I
Sbjct: 365 QASEQTLSCLMLLQQRRLSSI*VAWRPIIQDPTDVSS*A*AFRDALFMSIYRANFLESIR 544
Query: 1002 KEPEACRKYVFESPNFHHSGSYHCWPSSLMTIPDFIQPM 886
EP ACRKY F SPNFHHSGSYH PSS++T PDFIQPM
Sbjct: 545 SEPAACRKYDFSSPNFHHSGSYHGLPSSVITSPDFIQPM 661
Score = 137 bits (294), Expect = 1e-031
Identities = 59/145 (40%), Positives = 96/145 (66%)
Frame = -3 / +1
Query: 1183 SSIGTDFLLSGTAAAQPVIIHVSCIQSHHP*TY*YIIVCITLQ*RTIYVDVASQIF*EDK 1004
SS+GT+ +L AA+ ++I++ C+++HHP ++* I++ I+L +YV++ S F E K
Sbjct: 364 SSLGTNLVLFNATAAKTIVIYIGCLETHHPGSH*CIVMSISL*RCAVYVNIPS*FFGEYK 543
Query: 1003 QRTRSVSKIRF*ISKFPPLRFIPLLALFTYDHP*FHTTHVQSLATSTAFEHLN*PS*VKI 824
+ T +S++RF ISKFPP RFIP +LF+Y+ FHT +V + T+T F+ N* +K+
Sbjct: 544 K*TSRMSEVRFFISKFPPFRFIPWASLFSYNFSRFHTANVSTSLTATMFKKFN*SLKIKV 723
Query: 823 NVIFNFDIKFCIPGFNCSTEENFCF 749
N++ +F IKF IP + S +E F
Sbjct: 724 NIVISFYIKFRIPCLHSSAKEGLHF 798
Score = 101 bits (216), Expect = 8e-021
Identities = 63/153 (41%), Positives = 89/153 (58%)
Frame = +1 / -1
Query: 724 RGCRRITEQSKNFLQCCS*SLGCRILCQS*R*H*S*LSWVN*DARRPSR*PRIVHGLYEI 903
R ++ ++S+ L C ++GC ILC+S* +* * +N* + S+ +H LYEI
Sbjct: 823 RRLKKNCQESEVLL*HCCANMGCGILCKS**QY*P*S*GIN*TS*TSSQSS*CLHWLYEI 644
Query: 904 RDGHK*RGPTMV*T*VVEIWRFKNVFSTRFWFFVYPLKKFGSLHQHK*CVTAELCTR*YI 1083
+ *RG MV*T*+VEIWR K V T WF Y L+K S++ HK ++ LC+ YI
Sbjct: 643 WRSYN*RGKPMV*T*MVEIWR*KIVLPTCGWFTSYTLQKISSVY*HKQRISKGLCS*RYI 464
Query: 1084 SRFMDDGTECNLRG**PVVLQQFQTRENLFQCL 1182
S +DDG+ NL * +LQ TR+ LF+ L
Sbjct: 463 SGILDDGSPSNLYR*QSSLLQ*H*TRQGLFRGL 365
Score = 26.3 bits (51), Expect(2) = 2e-036
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -2 / +3
Query: 866 DGLRASQLTQLSQD*CYLQL*HKILHPRLQLQH*RKFLLCSVILLQPLHDF 714
D ++ QL Q * QL HKI HP Q *R+ L L L F
Sbjct: 681 DDVQEVQLIPQDQG*YCYQLLHKIPHPMFAQQC*RRTSLSWQFFLSLLMTF 833
Score = 26.3 bits (51), Expect(2) = 3e-074
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2 / -3
Query: 713 ESHEEAAEELPSK 751
E HEEA EELP K
Sbjct: 833 EGHEEAQEELPRK 795
>gb|CA927167.1|CA927167 MTU6CR.P5.G08 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 686
Score = 221 bits (478), Expect(2) = 1e-068
Identities = 87/156 (55%), Positives = 114/156 (73%)
Frame = +2 / -2
Query: 590 KKLEEKGVAIRFVIGRSANRGDSLDRNIDDENRQTKDFLILESHEEAAEELPSKAKIFFS 769
K +EKG+ +RFVIGRSANRG SLDR ID+ENRQT DF++L+ EA EE P K+K+FF
Sbjct: 469 KMEDEKGIVLRFVIGRSANRGGSLDREIDNENRQTNDFIVLDGQVEATEEQPKKSKLFFI 290
Query: 770 AAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGCMKSGMVISEEGQQWYEPE 949
AVE WDAEFY KV D++ +++ L L Y+GCMKSG V SE +WYEP+
Sbjct: 289 HAVETWDAEFYAKVNDDVYVNIDALGATLSTHLDKPRSYIGCMKSGEVFSEPTHKWYEPD 110
Query: 950 WWKFGDSKTYFRHASGSLFILSKNLARYININSASL 1057
WWKFGD+K+YFRHASG ++ +S+ LA++I+IN + L
Sbjct: 109 WWKFGDAKSYFRHASGEIYAISRALAQFISINRSLL 2
Score = 73.9 bits (155), Expect(3) = 4e-030
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = -3 / +2
Query: 832 VKINVIFNFDIKFCIPGFNCSTEENFCFAR*FFCSLFMTFKNQEVLCLPIFIINITVQAI 653
+ IN+I + IKF IPG + +E F C L +T KN EV+ LPIFI+++ VQ
Sbjct: 227 ININIIIDLSIKFSIPGLHSMYKE*F*LFWLLLCGLHLTIKNNEVISLPIFIVDLPVQTA 406
Query: 652 TSICTPTNNKTNSYTLFL 599
++ICT + K+ + LF+
Sbjct: 407 STICTSSYYKSQNNALFI 460
Score = 68.4 bits (143), Expect(3) = 4e-030
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = -1 / +3
Query: 996 PEACRKYVFESPNFHHSGSYHCWPSSLMTIPDFIQPM 886
P+ACRKY F SPNFH SGSYH W S T PDFI P+
Sbjct: 63 PDACRKYDFASPNFHQSGSYHLWVGSEKTSPDFIHPI 173
Score = 59.7 bits (124), Expect(2) = 1e-068
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +2 / -2
Query: 413 EMDLTKAKSEGYLWGNRTAAVDSDKKQQLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALK 592
EM+L A+ G++ D K++ L VIG+ T FG + R+ R +WMP G ALK
Sbjct: 649 EMELAAARLAGFVSNKLGDKGDGHSKKRXLVVIGIITTFGRKKNRDAIRKAWMPTGAALK 470
Query: 593 KLEEK 607
K+E++
Sbjct: 469 KMEDE 455
Score = 28.1 bits (55), Expect(3) = 4e-030
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1 / +3
Query: 603 SSSFFRASPLGIQEPRKTFLLRREPNPV*TPMT 505
SS FFRA+P+GI L PN V P+T
Sbjct: 459 SSIFFRAAPVGIHAFLIASLFFFRPNVVIIPIT 557
>gb|DV466552.1|DV466552 MTUNUL1.P7.B05 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 927
Score = 107 bits (228), Expect(4) = 3e-063
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2 / +3
Query: 719 HEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGCM 898
H E EL +K KI+F+ AV WDA+FYVKV+D++++++A L E L R +Y+GCM
Sbjct: 366 HVEGYLELSAKTKIYFATAVTLWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCM 545
Query: 899 KSGMVISEEGQQWYEPEWWKFGDS 970
KSG V++++G +++EPE+WKFG++
Sbjct: 546 KSGPVLNQKGVRYHEPEYWKFGEA 617
Score = 90.0 bits (190), Expect(4) = 3e-063
Identities = 31/58 (53%), Positives = 47/58 (81%)
Frame = +2 / +3
Query: 977 YFRHASGSLFILSKNLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDRLCCSS 1150
YFRHA+G L+ +SK+LA+YI+IN L +A++D+S+GSW +GL+A ++DD RLCC +
Sbjct: 627 YFRHATGQLYAISKDLAKYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGT 800
Score = 52.8 bits (109), Expect(5) = 1e-026
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = -1 / -3
Query: 1143 QHNRSSST*VAFSPIIHEPTDISSCA*LCSDALFMLM*RAKFFERINKEPEACRKYVF 970
QH+ SS A SPI H+P++ SS A LC F+ + AK FE P ACRKY+F
Sbjct: 793 QHSLRSSMCSASSPINHDPSETSSLANLCRTCWFIDIYLAKSFEIAYSCPVACRKYLF 620
Score = 52.8 bits (109), Expect(4) = 3e-063
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +2 / +3
Query: 479 SDKKQQLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLEEK 607
S K++ L VIG+ T F SR +R+ R +WMP+G+ KKLEE+
Sbjct: 126 SSGKRRYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEE 254
Score = 50.1 bits (103), Expect(4) = 3e-063
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2 / +3
Query: 599 EEKGVAIRFVIGRSANRGDSLDRNIDDENRQTKDFLILESHE 724
EEKG+ +RFVIG SA G LDR I+ E+++ DFL L+ E
Sbjct: 249 EEKGIIVRFVIGHSATSGGILDRAIEAEDKKHGDFLRLDHVE 374
Score = 39.6 bits (80), Expect(5) = 1e-026
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1 / -3
Query: 966 SPNFHHSGSYHCWPSSLMTIPDFIQPMY 883
SPNF +SGS++ P L T PDF+ P+Y
Sbjct: 613 SPNFQYSGSWYLTPF*LRTGPDFMHPIY 530
Score = 39.1 bits (79), Expect(5) = 1e-026
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1 / -3
Query: 708 IKKSFVCRFSSSILRSKLSPRFALRPITKRIATPFSSSFF 589
+KKS S+S+ SK+ P AL P+TKR PFSSS F
Sbjct: 358 LKKSPCFLSSASMALSKMPPDVAL*PMTKRTMIPFSSSSF 239
Score = 32.2 bits (64), Expect(5) = 1e-026
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3 / -2
Query: 832 VKINVIFNFDIKFCIPGFNCSTEENFC 752
+ +++I NFDI+ CIP N S++ C
Sbjct: 479 IYMDIIINFDIEICIPQSNSSSKIYLC 399
Score = 28.6 bits (56), Expect(5) = 1e-026
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -1 / -3
Query: 603 SSSFFRASPLGIQEPRKTFLLRREPNPV*TPMTARSCCF 487
SSSFF SP GI R LL R V P+T + F
Sbjct: 250 SSSFFLFSPCGIHVARTESLLFRLLKAVLIPITIKYLLF 134
>gb|CX654864.1|CX654864 PO01002C07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01002C07 5', mRNA sequence
Length = 670
Score = 106 bits (227), Expect(4) = 2e-057
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +2 / +3
Query: 716 SHEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGC 895
+H E EL SK +I+FS AV WDA+FY+KV+D+++++L + L R +YMGC
Sbjct: 252 NHVEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHINLGMVGSTLARHRSKPRVYMGC 431
Query: 896 MKSGMVISEEGQQWYEPEWWKFGD 967
MKSG V+++ G +++EPE+WKFG+
Sbjct: 432 MKSGPVLAQTGVKYHEPEYWKFGE 503
Score = 75.3 bits (158), Expect(4) = 2e-057
Identities = 25/55 (45%), Positives = 41/55 (74%)
Frame = +2 / +3
Query: 965 DSKTYFRHASGSLFILSKNLARYININSASLQSYAHDDISVGSWMMGLNATYVDD 1129
+ YFRHA+G ++ +SK+LA YI++N L YA++D+S+GSW +GL+ ++DD
Sbjct: 504 EGNKYFRHATGQIYAISKDLATYISVNRHMLHRYANEDVSLGSWFIGLDVEHIDD 668
Score = 50.6 bits (104), Expect(4) = 2e-057
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +2 / +3
Query: 602 EKGVAIRFVIGRSANRGDSLDRNIDDENRQTKDFLILESHE 724
EKG+ IRFVIG SA+ G LDR I+ E+ Q KDFL L E
Sbjct: 141 EKGIIIRFVIGHSASPGGVLDRAIEAEDDQHKDFLRLNHVE 263
Score = 47.8 bits (98), Expect(4) = 2e-057
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +2 / +3
Query: 485 KKQQLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLE 601
++ ++ V+G+ T F SR +R+ R +WMP+G+ LKKLE
Sbjct: 21 ERPKVFFVMGIMTAFSSRKRRDSIRETWMPKGEELKKLE 137
>gb|CX660316.1|CX660316 PO01021C08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01021C08 5', mRNA sequence
Length = 719
Score = 106 bits (227), Expect(5) = 1e-055
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +2 / +1
Query: 716 SHEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGC 895
+H E EL SK +I+FS AV WDA+FY+KV+D+++++L + L R +YMGC
Sbjct: 241 NHVEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHINLGMVGSTLARHRSKPRVYMGC 420
Query: 896 MKSGMVISEEGQQWYEPEWWKFGD 967
MKSG V+++ G +++EPE+WKFG+
Sbjct: 421 MKSGPVLAQTGVKYHEPEYWKFGE 492
Score = 50.6 bits (104), Expect(5) = 1e-055
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +2 / +1
Query: 602 EKGVAIRFVIGRSANRGDSLDRNIDDENRQTKDFLILESHE 724
EKG+ IRFVIG SA+ G LDR I+ E+ Q KDFL L E
Sbjct: 130 EKGIIIRFVIGHSASPGGVLDRAIEAEDDQHKDFLRLNHVE 252
Score = 47.8 bits (98), Expect(5) = 1e-055
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +2 / +1
Query: 485 KKQQLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLE 601
++ ++ V+G+ T F SR +R+ R +WMP+G+ LKKLE
Sbjct: 10 ERPKVFFVMGIMTAFSSRKRRDSIRETWMPKGEELKKLE 126
Score = 45.5 bits (93), Expect(5) = 1e-055
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2 / +1
Query: 965 DSKTYFRHASGSLFILSKNLARYININSASLQSYAH 1072
+ YFRHA+G ++ +SK+LA YI++N L YA+
Sbjct: 493 EGNKYFRHATGQIYAISKDLATYISVNRHMLHRYAN 600
Score = 41.4 bits (84), Expect(5) = 1e-055
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 1076 DISVGSWMMGLNATYVDDDRLCCSSS 1153
D+S+GSW +GL+ ++DD LCC ++
Sbjct: 605 DVSLGSWFIGLDVEHIDDRSLCCGTA 682
>gb|AJ780354.1|AJ780354 AJ780354 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900001G04F1, mRNA sequence
Length = 389
Score = 185 bits (399), Expect(2) = 2e-052
Identities = 78/100 (78%), Positives = 83/100 (83%)
Frame = +2 / +2
Query: 458 NRTAAVDSDKKQQLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLEEKGVAIRFVIGR 637
NR + S ++ LAVIG+YTGFGS LKR VFRGSWMPRGDALKKLEE+GV IRFVIGR
Sbjct: 89 NRVSENGSSSGKKFLAVIGIYTGFGSHLKRKVFRGSWMPRGDALKKLEERGVVIRFVIGR 268
Query: 638 SANRGDSLDRNIDDENRQTKDFLILESHEEAAEELPSKAK 757
SANRGDSLDRNID ENR TKDFLILE HEEA EELP K K
Sbjct: 269 SANRGDSLDRNIDGENRSTKDFLILEGHEEAQEELPKKVK 388
Score = 119 bits (255), Expect(2) = 2e-030
Identities = 53/72 (73%), Positives = 59/72 (81%)
Frame = -1 / -3
Query: 711 RIKKSFVCRFSSSILRSKLSPRFALRPITKRIATPFSSSFFRASPLGIQEPRKTFLLRRE 532
RI+KSFV RFS SI RSKLSPR ALRPITKRI TP SSSFF+ASPLGIQ+P TF +
Sbjct: 342 RIRKSFVERFSPSIFRSKLSPRLALRPITKRITTPLSSSFFKASPLGIQDPLNTFRFK*L 163
Query: 531 PNPV*TPMTARS 496
PNPV* P+TAR+
Sbjct: 162 PNPV*IPITARN 127
Score = 41.8 bits (85), Expect(2) = 2e-052
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2 / +2
Query: 368 RNLGCKAIGRKIVEAEMDLTKAKSEGYL 451
+ LGC + R+IVEAEM+LT A S+GYL
Sbjct: 2 KELGC*DLERRIVEAEMELTLANSQGYL 85
Score = 33.6 bits (67), Expect(2) = 2e-030
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -1 / -3
Query: 450 RYPSLLALVRSISASTIFLPIALHP 376
+YP LLA V SISASTI L + HP
Sbjct: 84 KYP*LLAKVNSISASTILLSKS*HP 10
>gb|DN490136.1|DN490136 UB29DPH05.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB29DPH05 3', mRNA sequence
Length = 775
Score = 106 bits (227), Expect(2) = 8e-042
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +2 / -2
Query: 716 SHEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGC 895
+H E EL SK +I+FS AV WDA+FY+KV+D+++++L + L R +YMGC
Sbjct: 666 NHVEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHINLGMVGSTLARHRSKPRVYMGC 487
Query: 896 MKSGMVISEEGQQWYEPEWWKFGD 967
MKSG V+++ G +++EPE+WKFG+
Sbjct: 486 MKSGPVLAQTGVKYHEPEYWKFGE 415
Score = 84.9 bits (179), Expect(2) = 8e-042
Identities = 28/63 (44%), Positives = 46/63 (73%)
Frame = +2 / -2
Query: 965 DSKTYFRHASGSLFILSKNLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDRLCC 1144
+ YFRHA+G ++ +SK+LA YI++N L YA++D+S+GSW +GL+ ++DD LCC
Sbjct: 414 EGNKYFRHATGQIYAISKDLATYISVNRHMLHRYANEDVSLGSWFIGLDVEHIDDRSLCC 235
Query: 1145 SSS 1153
++
Sbjct: 234 GTA 226
>gb|BU831213.1|BU831213 T019A02 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 540
Score = 108 bits (230), Expect(3) = 5e-037
Identities = 40/84 (47%), Positives = 64/84 (76%)
Frame = +2 / +2
Query: 719 HEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGCM 898
H E EL +K KI+F+ AV +WDA+FYVKV+D++++++A L E L R +Y+GCM
Sbjct: 206 HVEGYLELSAKTKIYFATAVTSWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCM 385
Query: 899 KSGMVISEEGQQWYEPEWWKFGDS 970
KSG V++++G +++EPE+WKFG++
Sbjct: 386 KSGPVLNQKGVRYHEPEYWKFGEA 457
Score = 47.3 bits (97), Expect(3) = 5e-037
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +2 / +2
Query: 599 EEKGVAIRFVIGRSANRGDSLDRNIDDENRQTKDFLILESHE 724
EEKG+ +RFVIG A G LDR I+ E+++ DFL L+ E
Sbjct: 89 EEKGIIVRFVIGHIATSGGILDRAIEAEDKKHGDFLRLDHVE 214
Score = 38.2 bits (77), Expect(3) = 5e-037
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +2 / +2
Query: 977 YFRHASGSLFILSKNLARYININ 1045
YFRHA+G L+ +SK+LA+ I+IN
Sbjct: 467 YFRHATGQLYAISKDLAKDISIN 535
>gb|CN521126.1|CN521126 GQ0106.B3_N14 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0106_N14 5', mRNA sequence
Length = 783
Score = 82.2 bits (173), Expect(3) = 2e-034
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +2 / +1
Query: 719 HEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGCM 898
H E EL +K KI+F+ AV WDA+FYVKV+D++++++A L E L R +Y+ CM
Sbjct: 532 HVEGYLELSAKTKIYFATAVTLWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIXCM 711
Query: 899 KSGMVISEEGQQWYEPEWWKFGDS 970
SG V+ G +EPE F ++
Sbjct: 712 XSGPVLXXXGVXXHEPEXXXFXEA 783
Score = 52.8 bits (109), Expect(3) = 2e-034
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +2 / +1
Query: 479 SDKKQQLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLEEK 607
S K++ L VIG+ T F SR +R+ R +WMP+G+ KKLEE+
Sbjct: 292 SSGKRRYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEE 420
Score = 50.1 bits (103), Expect(3) = 2e-034
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2 / +1
Query: 599 EEKGVAIRFVIGRSANRGDSLDRNIDDENRQTKDFLILESHE 724
EEKG+ +RFVIG SA G LDR I+ E+++ DFL L+ E
Sbjct: 415 EEKGIIVRFVIGHSATSGGILDRAIEAEDKKHGDFLRLDHVE 540
>gb|AI166473.1|AI166473 xylem.est.301 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 508
Score = 107 bits (228), Expect(4) = 6e-034
Identities = 40/84 (47%), Positives = 63/84 (75%)
Frame = +2 / +2
Query: 719 HEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGCM 898
H E EL +K KI+F+ AV WDA+FYVKV+D++++++A L E L R +Y+GCM
Sbjct: 59 HVEGYLELSAKTKIYFATAVTLWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCM 238
Query: 899 KSGMVISEEGQQWYEPEWWKFGDS 970
KSG V++++G +++EPE+WKFG++
Sbjct: 239 KSGPVLNQKGVRYHEPEYWKFGEA 310
Score = 42.8 bits (87), Expect(4) = 6e-034
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2 / +2
Query: 977 YFRHASGSLFILSKNLARYININ 1045
YFRHA+G L+ +SK+LA+YI+IN
Sbjct: 320 YFRHATGQLYAISKDLAKYISIN 388
Score = 28.6 bits (56), Expect(4) = 6e-034
Identities = 8/15 (53%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 1064 YAHDDISVGSWMMGL 1108
+A++D+S+GSW +GL
Sbjct: 408 FANEDVSLGSWFIGL 452
Score = 22.1 bits (42), Expect(4) = 6e-034
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 659 LDRNIDDENRQTKDFLILESHE 724
LDR I+ E+++ DFL L+ E
Sbjct: 2 LDRAIEAEDKKHGDFLRLDHVE 67
>gb|CN520175.1|CN520175 GQ0105.B3_J15 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_J15 5', mRNA sequence
Length = 758
Score = 142 bits (304), Expect = 6e-033
Identities = 48/95 (50%), Positives = 70/95 (73%)
Frame = +2 / -3
Query: 890 GCMKSGMVISEEGQQWYEPEWWKFGDSKTYFRHASGSLFILSKNLARYININSASLQSYA 1069
GCM S V E +WY P+WWKFGD+K+YFRHASG ++ +S+ LA++I+IN + L++YA
Sbjct: 756 GCMXSXEVFXEPTHKWYXPDWWKFGDAKSYFRHASGEIYAISRALAQFISINRSLLRTYA 577
Query: 1070 HDDISVGSWMMGLNATYVDDDRLCCSSSRQEKICS 1174
HDD+S GSW +GL+ ++D+ + CCSS IC+
Sbjct: 576 HDDVSTGSWFIGLDVKHIDESKFCCSSWATGSICA 472
>gb|DN501562.1|DN501562 V005B02.5pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V005B02 5', mRNA sequence
Length = 689
Score = 109 bits (233), Expect(2) = 2e-032
Identities = 40/83 (48%), Positives = 60/83 (72%)
Frame = +2 / +3
Query: 719 HEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAGLIEMLEGRRGSQGLYMGCM 898
H E EL +K +++FS AV WDAEFY+KV+D+++L+L L+ L R +Y+GCM
Sbjct: 162 HVEGYHELSTKTRLYFSTAVSIWDAEFYLKVDDDVHLNLGMLMSTLARYRSKPRIYIGCM 341
Query: 899 KSGMVISEEGQQWYEPEWWKFGD 967
KSG V+S++ ++YEPE+WKFG+
Sbjct: 342 KSGPVLSQKEDKYYEPEYWKFGE 410
Score = 51.0 bits (105), Expect(2) = 2e-032
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2 / +3
Query: 599 EEKGVAIRFVIGRSANRGDSLDRNIDDENRQTKDFLILESHE 724
+EKG+ IRFVIG SA G LDR +D E+ + KDFL L+ E
Sbjct: 45 KEKGIVIRFVIGHSATPGGVLDRAVDLEDAEHKDFLRLKHVE 170
>gb|AJ770047.1|AJ770047 AJ770047 Populus euphratica leaf 3-6 months, adult Populus euphratica
cDNA clone P0001100006C04F1, mRNA sequence
Length = 530
Score = 130 bits (279), Expect = 2e-029
Identities = 52/66 (78%), Positives = 60/66 (90%)
Frame = +2 / +3
Query: 977 YFRHASGSLFILSKNLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDRLCCSSSR 1156
YFRHASGSL ILSKNLARYI+INSASL+SYAHDD SVGS MMG+ ATY+DD+RLCC S +
Sbjct: 6 YFRHASGSLLILSKNLARYIDINSASLKSYAHDDTSVGS*MMGVQATYIDDNRLCCGSIK 185
Query: 1157 QEKICS 1174
Q+K+CS
Sbjct: 186 QDKVCS 203
>gb|DN491586.1|DN491586 V005B02.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V005B02 3', mRNA sequence
Length = 871
Score = 87.7 bits (185), Expect(2) = 9e-028
Identities = 33/77 (42%), Positives = 50/77 (64%)
Frame = +2 / -3
Query: 920 EEGQQWYEPEWWKFGDSKTYFRHASGSLFILSKNLARYININSASLQSYAHDDISVGSWM 1099
+E + + W D YFRHA+G L+ +SK+LA YI+INS L YA++D+S+GSW+
Sbjct: 428 KEDKYYEPEYWKFGEDGNKYFRHATGQLYAISKDLAAYISINSPILHRYANEDVSLGSWL 249
Query: 1100 MGLNATYVDDDRLCCSS 1150
+GL VD+ +CC +
Sbjct: 248 LGLEVELVDERSMCCGT 198
Score = 57.0 bits (118), Expect(2) = 9e-028
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2 / -2
Query: 719 HEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDL 835
H E EL +K +++FS AV WDAEFY+KV+D+++L+L
Sbjct: 633 HVEGYHELSTKTRLYFSTAVSIWDAEFYLKVDDDVHLNL 517
>gb|BI130614.1|BI130614 G108P23Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 448
Score = 90.0 bits (190), Expect(2) = 2e-027
Identities = 31/58 (53%), Positives = 47/58 (81%)
Frame = +2 / +2
Query: 977 YFRHASGSLFILSKNLARYININSASLQSYAHDDISVGSWMMGLNATYVDDDRLCCSS 1150
YFRHA+G L+ +SK+LA+YI+IN L +A++D+S+GSW +GL+A ++DD RLCC +
Sbjct: 131 YFRHATGQLYAISKDLAKYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGT 304
Score = 53.8 bits (111), Expect(2) = 2e-027
Identities = 16/30 (53%), Positives = 28/30 (93%)
Frame = +2 / +2
Query: 881 LYMGCMKSGMVISEEGQQWYEPEWWKFGDS 970
+Y+GCMKSG V++++G +++EPE+WKFG++
Sbjct: 32 VYIGCMKSGPVLNQKGVRYHEPEYWKFGEA 121
>gb|CK103215.1|CK103215 G108P23.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G108P23 5', mRNA sequence
Length = 431
Score = 123 bits (263), Expect = 3e-027
Identities = 46/101 (45%), Positives = 72/101 (71%)
Frame = +2 / +1
Query: 848 EMLEGRRGSQGLYMGCMKSGMVISEEGQQWYEPEWWKFGDSKTYFRHASGSLFILSKNLA 1027
E L R +Y+GCMKSG V++++G +++EPE+ YFRHA+G L+ +SK+LA
Sbjct: 7 ETLVRHRKKPRVYIGCMKSGPVLNQKGVRYHEPEY*NCEAGNKYFRHATGQLYAISKDLA 186
Query: 1028 RYININSASLQSYAHDDISVGSWMMGLNATYVDDDRLCCSS 1150
+YI+IN L +A++D+S+GSW +GL+A ++DD RLCC +
Sbjct: 187 KYISINQHVLHKFANEDVSLGSWFIGLDAEHIDDRRLCCGT 309
>gb|CX171034.1|CX171034 E05_69-24_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 633
Score = 111 bits (236), Expect = 1e-023
Identities = 47/129 (36%), Positives = 77/129 (59%)
Frame = +2 / +1
Query: 221 LVMAFLSCLAWLYVAGRLWQDAQTRAILSGLLEKSSTSVPKVLSVEDKLRNLGCKAIGRK 400
L++A + +A +YVAGRLWQDA+TR L L++ +SV+D L+ + C+ ++
Sbjct: 223 LLLAMFATMATIYVAGRLWQDAETRLHLVEELDERIGQGKSAVSVDDTLKIIACREQQKR 402
Query: 401 IVEAEMDLTKAKSEGYLWGNRTAAVDSDKKQQLLAVIGVYTGFGSRLKRNVFRGSWMPRG 580
+ EM+L A+ G++ D K+++L VIG+ T FG + R+ R +WMP G
Sbjct: 403 LSAVEMELAAARQAGFVSNKLVDKGDGHSKKRILVVIGIITTFGRKKNRDAIRKAWMPTG 582
Query: 581 DALKKLEEK 607
ALKK+E++
Sbjct: 583 AALKKMEDE 609
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 647,432,381
Number of Sequences: 369679
Number of extensions: 10481881
Number of successful extensions: 260508
Number of sequences better than 1.0e-020: 27
length of database: 67,802,888
effective HSP length: 54
effective length of database: 47,840,222
effective search space used: 19375289910
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)