TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418946.2.2
(710 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV256705.1|CV256705 WS0244.B21_J09 PTxD-ICC-N-A-14 Popul... 282 2e-078
gb|CV249853.1|CV249853 WS01125.B21_I08 PT-P-FL-A-2 Populus ... 282 2e-078
gb|DN494975.1|DN494975 N009C11.5pR Populus bark cDNA librar... 280 9e-078
gb|CV246263.1|CV246263 WS0111.B21_N04 PT-P-FL-A-2 Populus t... 276 8e-077
gb|CN550311.1|CN550311 GQ0243.B3_G13 GQ024 Populus trichoca... 260 7e-069
gb|DT524325.1|DT524325 WS02042.C21.1_F05 PTxN-IB-N-A-11 Pop... 259 2e-068
gb|CV275032.1|CV275032 WS0175.B21_C07 PTxD-NR-A-8 Populus t... 248 4e-065
gb|CV232074.1|CV232074 WS0196.B21_H14 PT-DX-N-A-10 Populus ... 247 5e-065
gb|BU831269.1|BU831269 T019F02 Populus apical shoot cDNA li... 246 1e-064
gb|CV264055.1|CV264055 WS02023.B21_H24 PTxN-IB-N-A-11 Popul... 245 3e-064
gb|CV248266.1|CV248266 WS01120.B21_A19 PT-P-FL-A-2 Populus ... 230 9e-060
gb|DN493079.1|DN493079 X055G01.3pR Populus wood cDNA librar... 210 8e-054
gb|DN503094.1|DN503094 X055G01.5pR Populus wood cDNA librar... 208 3e-053
gb|CX168355.1|CX168355 A12_69-60_02.ab1 leaf inoculated wit... 193 1e-048
gb|CV228298.1|CV228298 WS0191.B21_K13 PT-DX-N-A-10 Populus ... 193 1e-048
gb|BU897357.1|BU897357 X055G01 Populus wood cDNA library Po... 138 5e-048
gb|BU896477.1|BU896477 X041A06 Populus wood cDNA library Po... 188 5e-047
gb|BU819078.1|BU819078 UA39BPB02 Populus tremula cambium cD... 182 2e-045
gb|CV230081.1|CV230081 WS01915.B21_F22 PT-DX-N-A-10 Populus... 179 1e-044
gb|AJ772216.1|AJ772216 AJ772216 Populus euphratica shoot in... 178 4e-044
gb|CK088908.1|CK088908 A079P12.3pR Hybrid aspen plasmid lib... 173 9e-043
gb|CV229682.1|CV229682 WS01914.B21_B17 PT-DX-N-A-10 Populus... 166 1e-040
gb|CN522760.1|CN522760 GQ0123.B3_C19 GQ012 Populus trichoca... 165 3e-040
gb|BU820590.1|BU820590 UB11CPH01 Populus tremula cambium cD... 161 5e-039
gb|CF232861.1|CF232861 PtaJXO0016F7F0711 Poplar cDNA librar... 122 7e-034
gb|CV259929.1|CV259929 WS02012.B21_K15 PTxN-IB-N-A-11 Popul... 130 3e-033
gb|CV229637.1|CV229637 WS01913.B21_P11 PT-DX-N-A-10 Populus... 132 2e-030
gb|BI069529.1|BI069529 C002P54U Populus strain T89 leaves P... 118 4e-030
gb|CF235857.1|CF235857 PtaJXT0027H12H1216 Poplar cDNA libra... 130 8e-030
gb|CK096914.1|CK096914 UB32BPD05.3pR Populus active cambium... 130 8e-030
gb|CN518891.1|CN518891 GQ0102.B3_E01 GQ010 Populus trichoca... 127 5e-029
gb|BU891366.1|BU891366 P049D09 Populus petioles cDNA librar... 126 2e-028
gb|AC149540.1| Populus trichocarpa clone Pop1-111J19, compl... 94 1e-027
gb|BP933403.1|BP933403 BP933403 full-length enriched poplar... 114 7e-025
gb|CN517705.1|CN517705 GQ0092.B3_H22 GQ009 Populus trichoca... 112 2e-024
gb|BP932002.1|BP932002 BP932002 full-length enriched poplar... 111 7e-024
gb|CN549860.1|CN549860 GQ0243.B3_A18 GQ024 Populus trichoca... 110 9e-024
gb|DT469857.1|DT469857 WS01919.C21_B19 PT-DX-N-A-10 Populus... 107 6e-023
gb|BU891564.1|BU891564 P052B10 Populus petioles cDNA librar... 64 2e-022
gb|DT485310.1|DT485310 WS02527.B21_N20 PT-MB-N-A-15 Populus... 66 6e-022
gb|BU813345.1|BU813345 N009C11 Populus bark cDNA library Po... 101 5e-021
gb|CF233701.1|CF233701 PtaJXO0026F5F0511 Poplar cDNA librar... 66 9e-021
>gb|CV256705.1|CV256705 WS0244.B21_J09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_J09 3', mRNA sequence
Length = 834
Score = 282 bits (610), Expect(2) = 2e-078
Identities = 119/171 (69%), Positives = 139/171 (81%)
Frame = +3 / -3
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
ITK +S LVY SW+VIF+IL VMKTVSVGRR+FSA FQL FRLIKG+IF+TF +I+V
Sbjct: 697 ITKKTKSFLVYGVSWLVIFLILFVMKTVSVGRRKFSANFQLAFRLIKGMIFLTFISILVT 518
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLL 413
LIA+P MTV DIFVCILAFMPTGWG+ A +P++ + G WGS++ LARGYEI+MGLL
Sbjct: 517 LIALPHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIVMGLL 338
Query: 414 LFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
LFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 337 LFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRSSRNKE* 185
Score = 121 bits (259), Expect = 5e-027
Identities = 60/162 (37%), Positives = 84/162 (51%)
Frame = +2 / -2
Query: 80 GLLLLMGCNFCDFARYEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDG 259
GL +M + + ED I KVQC +PA VP + G+DI NIY H + + +DG
Sbjct: 671 GLWCIMAGHLSNIVCDEDCICWAAKVQC*LPACVPSN*GNDIPNIYLHSCHFDCTASYDG 492
Query: 260 AGHICLHPCFHAHWMGFXXDXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPR 439
AGH+C+H CFHA+W+G D S LG+ +C LR+ G +PVH+ +P
Sbjct: 491 AGHLCMHSCFHANWLGDAIDCTSMQANRSTSRVLGISSDTCSWLRNRYGLAPVHSSCIPC 312
Query: 440 LXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQERXXXXEQRI 565
L + V IPD AVQP + SA+ +E EQ +
Sbjct: 311 LVSICV*IPDSYAVQPSI**RSANFSNSWRPKEGSLFKEQGV 186
Score = 119 bits (255), Expect(3) = 4e-050
Identities = 56/105 (53%), Positives = 67/105 (63%)
Frame = -2 / +3
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ+P G A I P PVGMKARM T MS TV+ G AI++T M +NV NI PLI
Sbjct: 384 DPQNPAR*TIGLHACAINSIPQPVGMKARMHTKMSCTVI*GSAIKVTRMEINVRNIIPLI 563
Query: 187 NRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTLWLSLVI 53
RN SW ALN PTDTVFIT+ I K+T+H+ *T L + VI
Sbjct: 564 RRNASWKLALNFRRPTDTVFITNNIRKMTSHDTP*TKKLLVFFVI 698
Score = 86.8 bits (183), Expect(3) = 4e-050
Identities = 37/50 (74%), Positives = 38/50 (76%)
Frame = -2 / +3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
+SLF SFL P IREICRPLLNAWLNSI VWNSDTN QAR A GVN
Sbjct: 186 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 335
Score = 30.4 bits (60), Expect(3) = 4e-050
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -2 / +3
Query: 61 LVIFFVIFR*YTSPY 17
L++FFVI +*YTSPY
Sbjct: 678 LLVFFVIVK*YTSPY 722
Score = 30.4 bits (60), Expect(2) = 2e-078
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 15 RYGLVYHLNITKK 53
+YGLVYHL ITKK
Sbjct: 724 QYGLVYHLTITKK 686
>gb|CV249853.1|CV249853 WS01125.B21_I08 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01125_I08 3', mRNA sequence
Length = 735
Score = 282 bits (610), Expect(2) = 2e-078
Identities = 119/171 (69%), Positives = 139/171 (81%)
Frame = +3 / -2
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
ITK +S LVY SW+VIF+IL VMKTVSVGRR+FSA FQL FRLIKG+IF+TF +I+V
Sbjct: 692 ITKKTKSFLVYGVSWLVIFLILFVMKTVSVGRRKFSANFQLAFRLIKGMIFLTFISILVT 513
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLL 413
LIA+P MTV DIFVCILAFMPTGWG+ A +P++ + G WGS++ LARGYEI+MGLL
Sbjct: 512 LIALPHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIVMGLL 333
Query: 414 LFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
LFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 332 LFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRSSRNKE* 180
Score = 128 bits (275), Expect = 3e-029
Identities = 62/162 (38%), Positives = 86/162 (53%)
Frame = +2 / -1
Query: 80 GLLLLMGCNFCDFARYEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDG 259
GL +M + + R EDRI KVQC +PA VP + G+DI NIY H + + +DG
Sbjct: 666 GLWCIMAGHLSNIVRDEDRICWAAKVQC*LPACVPSN*GNDIPNIYLHSCHFDCTASYDG 487
Query: 260 AGHICLHPCFHAHWMGFXXDXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPR 439
AGH+C+H CFHA+W+G D S LG+ +C LR+ G +PVH+ +P
Sbjct: 486 AGHLCMHSCFHANWLGDAFDCTSMQANRSTSRVLGISSDTCSWLRNRYGLAPVHSSCIPC 307
Query: 440 LXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQERXXXXEQRI 565
L + V IPD AVQP + SA+ +E EQ +
Sbjct: 306 LVSICV*IPDSYAVQPSI**RSANFSNSWRPKEGSLFKEQGV 181
Score = 119 bits (255), Expect(3) = 4e-050
Identities = 56/105 (53%), Positives = 67/105 (63%)
Frame = -2 / +1
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ+P G A I P PVGMKARM T MS TV+ G AI++T M +NV NI PLI
Sbjct: 379 DPQNPAR*TIGLHACAIKSIPQPVGMKARMHTKMSCTVI*GSAIKVTRMEINVRNIIPLI 558
Query: 187 NRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTLWLSLVI 53
RN SW ALN PTDTVFIT+ I K+T+H+ *T L + VI
Sbjct: 559 RRNASWKLALNFRRPTDTVFITNNIRKMTSHDTP*TKKLLVFFVI 693
Score = 86.8 bits (183), Expect(3) = 4e-050
Identities = 37/50 (74%), Positives = 38/50 (76%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
+SLF SFL P IREICRPLLNAWLNSI VWNSDTN QAR A GVN
Sbjct: 181 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 330
Score = 30.4 bits (60), Expect(3) = 4e-050
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -2 / +1
Query: 61 LVIFFVIFR*YTSPY 17
L++FFVI +*YTSPY
Sbjct: 673 LLVFFVIVK*YTSPY 717
Score = 30.4 bits (60), Expect(2) = 2e-078
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / -2
Query: 15 RYGLVYHLNITKK 53
+YGLVYHL ITKK
Sbjct: 719 QYGLVYHLTITKK 681
>gb|DN494975.1|DN494975 N009C11.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N009C11 5', mRNA sequence
Length = 826
Score = 280 bits (606), Expect(2) = 9e-078
Identities = 118/171 (69%), Positives = 138/171 (80%)
Frame = +3 / +1
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
ITK +S LVY SW+VIF+IL VMKTVSVGRR+FSA FQL FRLIKG+IF+TF +I+V
Sbjct: 184 ITKKTKSFLVYGVSWLVIFLILFVMKTVSVGRRKFSANFQLAFRLIKGMIFLTFISILVT 363
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLL 413
LIA+P MTV DIFVCILAFMPTGWG+ A +P++ + G WGS++ LARGYEI+MGLL
Sbjct: 364 LIALPHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIIMGLL 543
Query: 414 LFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
LFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G + D + NKE*
Sbjct: 544 LFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRNDRSSRNKE* 696
Score = 122 bits (260), Expect = 3e-027
Identities = 56/138 (40%), Positives = 76/138 (55%)
Frame = +2 / +3
Query: 80 GLLLLMGCNFCDFARYEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDG 259
GL LM + + R ED I KVQC +PA VP + G+DI NIY H + + +D
Sbjct: 210 GLWCLMAGHLSNIVRDEDGICWAAKVQC*LPACVPSN*GNDIPNIYLHSCHFDCTASYDS 389
Query: 260 AGHICLHPCFHAHWMGFXXDXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPR 439
AGH+C+H CFHA+W+G D S LG+ +C LR+ G +PVH+ +P
Sbjct: 390 AGHLCMHSCFHANWLGDAFDCTSMQAYRSTSRVLGISSDTCSWLRNHYGLAPVHSSCIPC 569
Query: 440 LXXVRVGIPDQDAVQPGV 493
L + V IPD AVQP +
Sbjct: 570 LVSICV*IPDSYAVQPSI 623
Score = 121 bits (258), Expect(3) = 5e-049
Identities = 57/105 (54%), Positives = 67/105 (63%)
Frame = -2 / -3
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ+P G A I P PVGMKARM T MS TV+ G AI++T M +NV NI PLI
Sbjct: 497 DPQNPAR*TIGLHACAIKSIPQPVGMKARMHTKMSCTVI*GSAIKVTRMEINVRNIIPLI 318
Query: 187 NRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTLWLSLVI 53
RN SW ALN PTDTVFIT+ I K+T+HE *T L + VI
Sbjct: 317 RRNASWKLALNFRRPTDTVFITNNIRKMTSHETP*TKKLLVFFVI 183
Score = 81.7 bits (172), Expect(3) = 5e-049
Identities = 36/50 (72%), Positives = 37/50 (74%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
+SLF SFL P IREI RPLLNAWLNSI VWNSDTN QAR A GVN
Sbjct: 695 HSLFLEERSFLGPPRIREIWRPLLNAWLNSIRVWNSDTNGNQARNATGVN 546
Score = 30.4 bits (60), Expect(3) = 5e-049
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -2 / -3
Query: 61 LVIFFVIFR*YTSPY 17
L++FFVI +*YTSPY
Sbjct: 203 LLVFFVIVK*YTSPY 159
Score = 30.4 bits (60), Expect(2) = 9e-078
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 15 RYGLVYHLNITKK 53
+YGLVYHL ITKK
Sbjct: 157 QYGLVYHLTITKK 195
>gb|CV246263.1|CV246263 WS0111.B21_N04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0111_N04 3', mRNA sequence
Length = 722
Score = 276 bits (598), Expect(2) = 8e-077
Identities = 116/169 (68%), Positives = 137/169 (81%)
Frame = +3 / -1
Query: 60 KDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILI 239
+ +S LVY SW+VIF+IL VMKTVSVGRR+FSA FQL FRLIKG+IF+TF +I+V LI
Sbjct: 686 RKTKSFLVYGVSWLVIFLILFVMKTVSVGRRKFSANFQLAFRLIKGMIFLTFISILVTLI 507
Query: 240 AIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLF 419
A+P MTV DIFVCILAFMPTGWG+ A +P++ + G WGS++ LARGYEI+MGLLLF
Sbjct: 506 ALPHMTVQDIFVCILAFMPTGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIVMGLLLF 327
Query: 420 TPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
TP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 326 TPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRSSRNKE* 180
Score = 128 bits (275), Expect = 3e-029
Identities = 62/162 (38%), Positives = 86/162 (53%)
Frame = +2 / -3
Query: 80 GLLLLMGCNFCDFARYEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDG 259
GL +M + + R EDRI KVQC +PA VP + G+DI NIY H + + +DG
Sbjct: 666 GLWCIMAGHLSNIVRDEDRICWAAKVQC*LPACVPSN*GNDIPNIYLHSCHFDCTASYDG 487
Query: 260 AGHICLHPCFHAHWMGFXXDXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPR 439
AGH+C+H CFHA+W+G D S LG+ +C LR+ G +PVH+ +P
Sbjct: 486 AGHLCMHSCFHANWLGDAFDCTSMQANRSTSRVLGISSDTCSWLRNRYGLAPVHSSCIPC 307
Query: 440 LXXVRVGIPDQDAVQPGVQQXSADLPYXXXTQERXXXXEQRI 565
L + V IPD AVQP + SA+ +E EQ +
Sbjct: 306 LVSICV*IPDSYAVQPSI**RSANFSNSWRPKEGSLFKEQGV 181
Score = 117 bits (251), Expect(3) = 2e-048
Identities = 55/103 (53%), Positives = 66/103 (64%)
Frame = -2 / +1
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ+P G A I P PVGMKARM T MS TV+ G AI++T M +NV NI PLI
Sbjct: 379 DPQNPAR*TIGLHACAIKSIPQPVGMKARMHTKMSCTVI*GSAIKVTRMEINVRNIIPLI 558
Query: 187 NRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTLWLSL 59
RN SW ALN PTDTVFIT+ I K+T+H+ *T L + L
Sbjct: 559 RRNASWKLALNFRRPTDTVFITNNIRKMTSHDTP*TKKLLVFL 687
Score = 86.8 bits (183), Expect(3) = 2e-048
Identities = 37/50 (74%), Positives = 38/50 (76%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
+SLF SFL P IREICRPLLNAWLNSI VWNSDTN QAR A GVN
Sbjct: 181 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 330
Score = 30.9 bits (61), Expect(2) = 8e-077
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 15 RYGLVYHLNITKKITK 62
+YGLVYHL ITKK K
Sbjct: 720 QYGLVYHLTITKKNQK 673
Score = 26.7 bits (52), Expect(3) = 2e-048
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 52 FFVIFR*YTSPY 17
FFVI +*YTSPY
Sbjct: 683 FFVIVK*YTSPY 718
>gb|CN550311.1|CN550311 GQ0243.B3_G13 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0243_G13 5', mRNA sequence
Length = 686
Score = 260 bits (562), Expect = 7e-069
Identities = 108/152 (71%), Positives = 126/152 (82%)
Frame = +3 / +1
Query: 111 VILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAF 290
+IL VMKTVSVGRR+FSA FQLVFRLIKG+IF+TF +I+V LIA+P MTV D+ VCILAF
Sbjct: 25 LILFVMKTVSVGRRKFSANFQLVFRLIKGMIFLTFVSILVTLIALPHMTVQDVIVCILAF 204
Query: 291 MPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQT 470
MPTGWG+ A +PV+ + G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQT
Sbjct: 205 MPTGWGMLLIAQACKPVVQRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQT 384
Query: 471 RMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
RMLFNQAFS GLQISRI GH+KD + NKE*
Sbjct: 385 RMLFNQAFSRGLQISRILGGHRKDRSSRNKE* 480
Score = 177 bits (381), Expect = 7e-044
Identities = 84/154 (54%), Positives = 93/154 (60%)
Frame = -2 / -1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
YSLF SFL P +REICRPLLNAWLNSI VWNSDT QAR A GVN
Sbjct: 479 YSLFLEERSFLWPPRMREICRPLLNAWLNSIRVWNSDTKGNQARNATGVNRSKPITISYP 300
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
+PQ+P TG A I P PVGMKARM T S TV+ G AI++T M V
Sbjct: 299 RASVRTDPQNPAR*TTGLQA*AIKSIPQPVGMKARMHTMTSCTVI*GSAIKVTRMDTKVR 120
Query: 205 NIRPLINRNTSWNSALNLLLPTDTVFITSKITKI 104
NI PLI RNTSW ALN PTDTVFIT+ I+ +
Sbjct: 119 NIIPLIRRNTSWKLALNFRRPTDTVFITNNISLV 18
>gb|DT524325.1|DT524325 WS02042.C21.1_F05 PTxN-IB-N-A-11 Populus trichocarpa x Populus
nigra cDNA clone WS02042_F05 3', mRNA sequence
Length = 884
Score = 259 bits (559), Expect = 2e-068
Identities = 107/166 (64%), Positives = 131/166 (78%)
Frame = +3 / -3
Query: 69 QSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIP 248
+S LVY SW+VI ++L +MK V+VGRR+ SA FQL+FRLIKGLIFITF ++ + LIA+P
Sbjct: 870 KSFLVYGVSWIVIILVLFLMKAVAVGRRQLSANFQLLFRLIKGLIFITFISVFITLIALP 691
Query: 249 GMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPI 428
MT+ D+ VCILAF+P+GWGL A +P+I G WGS++ LARGYEI+MGLLLFTP+
Sbjct: 690 HMTIRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTPV 511
Query: 429 AFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 510 AFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 373
Score = 102 bits (217), Expect(2) = 1e-037
Identities = 47/99 (47%), Positives = 58/99 (58%)
Frame = -2 / +2
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ P I+G A I PHP G ARMQT S VM G AI++ + V+N+RPL+
Sbjct: 572 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*GSAIKVMNTEIKVMNMRPLM 751
Query: 187 NRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TSTL 71
+RN SW AL+ LLPT T FI + IT HE *T L
Sbjct: 752 SRNKSWKFALSCLLPTATAFIKNNTRMITIHETP*TRKL 868
Score = 74.4 bits (156), Expect(2) = 1e-037
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / +2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
YSLF SFL P IREI RP L AWLNSI VWNS+TN QA+ A GVN
Sbjct: 374 YSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 523
>gb|CV275032.1|CV275032 WS0175.B21_C07 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0175_C07 3', mRNA sequence
Length = 826
Score = 248 bits (535), Expect = 4e-065
Identities = 101/157 (64%), Positives = 124/157 (78%)
Frame = +3 / -1
Query: 96 WVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFV 275
W+VI ++ +MK V+VGRR+ SA FQL+FRLIKGLIFITF ++ + LIA+P MT+ D+ V
Sbjct: 826 WIVIILVCFLMKAVAVGRRQLSANFQLLFRLIKGLIFITFISVFITLIALPHMTIRDVIV 647
Query: 276 CILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFV 455
CILAF+P+GWGL A +P+I G WGS++ LARGYEI+MGLLLFTP+AFLA FV
Sbjct: 646 CILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFV 467
Query: 456 SEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
SEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 466 SEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 356
Score = 93.2 bits (197), Expect(2) = 6e-035
Identities = 42/89 (47%), Positives = 52/89 (58%)
Frame = -2 / +3
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ P I+G A I PHP G ARMQT S VM G AI++ + V+N+RPL+
Sbjct: 555 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*GSAIKVMNTEIKVMNMRPLM 734
Query: 187 NRNTSWNSALNLLLPTDTVFITSKITKIT 101
+RN SW AL+ LLPT T FI IT
Sbjct: 735 SRNKSWKFALSCLLPTATAFIKKHTRMIT 821
Score = 74.4 bits (156), Expect(2) = 6e-035
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / +3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
YSLF SFL P IREI RP L AWLNSI VWNS+TN QA+ A GVN
Sbjct: 357 YSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 506
>gb|CV232074.1|CV232074 WS0196.B21_H14 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0196_H14 3', mRNA sequence
Length = 677
Score = 247 bits (534), Expect = 5e-065
Identities = 103/150 (68%), Positives = 122/150 (81%)
Frame = +3 / -1
Query: 117 LLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMP 296
L + +TVSVGRR+FSA FQL FRLIKG+IF+TF +I+V LIA+P MTV DIFVCILAFMP
Sbjct: 629 LFLTQTVSVGRRKFSANFQLAFRLIKGMIFLTFISILVTLIALPHMTVQDIFVCILAFMP 450
Query: 297 TGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRM 476
TGWG+ A +P++ + G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRM
Sbjct: 449 TGWGMLLIAQACKPIVQRAGFWGSVQTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRM 270
Query: 477 LFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
LFNQAFS GLQISRI G +KD + NKE*
Sbjct: 269 LFNQAFSRGLQISRILGGPRKDRSSRNKE* 180
Score = 119 bits (255), Expect = 2e-026
Identities = 57/147 (38%), Positives = 78/147 (53%)
Frame = +2 / -3
Query: 125 YEDRISGQEKVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWM 304
Y D I KVQC +PA VP + G+DI NIY H + + +DGAGH+C+H CFHA+W+
Sbjct: 621 YSDCICWAAKVQC*LPACVPSN*GNDIPNIYLHSCHFDCTASYDGAGHLCMHSCFHANWL 442
Query: 305 GFXXDXXSDPXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQ 484
G D S LG+ +C LR+ G +PVH+ +P L + V IPD AVQ
Sbjct: 441 GDAFDCTSMQANRSTSRVLGISSDACSWLRNRYGLAPVHSSCIPCLVSICV*IPDSYAVQ 262
Query: 485 PGVQQXSADLPYXXXTQERXXXXEQRI 565
P + SA+ +E EQ +
Sbjct: 261 PSI**RSANFSNSWRPKEGSLFKEQGV 181
Score = 95.5 bits (202), Expect(2) = 3e-039
Identities = 44/79 (55%), Positives = 50/79 (63%)
Frame = -2 / +1
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ+P G A I P PVGMKARM T MS TV+ G AI++T M +NV NI PLI
Sbjct: 379 DPQNPAR*TIGLHACAIKSIPQPVGMKARMHTKMSCTVI*GSAIKVTRMEINVRNIIPLI 558
Query: 187 NRNTSWNSALNLLLPTDTV 131
RN SW ALN PTDTV
Sbjct: 559 RRNASWKLALNFRRPTDTV 615
Score = 86.8 bits (183), Expect(2) = 3e-039
Identities = 37/50 (74%), Positives = 38/50 (76%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
+SLF SFL P IREICRPLLNAWLNSI VWNSDTN QAR A GVN
Sbjct: 181 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 330
>gb|BU831269.1|BU831269 T019F02 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 694
Score = 246 bits (531), Expect = 1e-064
Identities = 102/162 (62%), Positives = 125/162 (77%)
Frame = +3 / +2
Query: 78 LVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMT 257
LVY SW+ I ++L +MK V+VGRR+ SA FQL+FRLIKGLIFITF ++ + LIA+P MT
Sbjct: 2 LVYGVSWIGIILVLFLMKAVAVGRRQLSANFQLLFRLIKGLIFITFISVFITLIALPHMT 181
Query: 258 VLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFL 437
+ DI VCILAF+P+GWGL A +P+I G WGS++ LARGYEI+MGLLLFTP+AFL
Sbjct: 182 IRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTPVAFL 361
Query: 438 AXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE 563
A FVSEFQTRMLFNQAFS GLQISRI G +K+ T +
Sbjct: 362 A*FPFVSEFQTRMLFNQAFSRGLQISRILGGPRKEDRTSRNK 487
Score = 101 bits (216), Expect(2) = 2e-034
Identities = 46/97 (47%), Positives = 58/97 (59%)
Frame = -2 / -2
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ P I+G A I PHP G ARMQT +S VM G AI++ + V+N+RPL+
Sbjct: 291 DPQKPACCISGLQACAISSSPHPEGKNARMQTMISRIVM*GSAIKVMNTEIKVMNMRPLM 112
Query: 187 NRNTSWNSALNLLLPTDTVFITSKITKITTHEKQ*TS 77
+RN SW AL+ LLPT T FI + I HE *TS
Sbjct: 111 SRNKSWKFALSCLLPTATAFIKNNTRMIPIHETP*TS 1
Score = 64.3 bits (134), Expect(2) = 2e-034
Identities = 29/45 (64%), Positives = 31/45 (68%)
Frame = -2 / -2
Query: 550 VXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
V SFL P IREI RP L AWLNSI VWNS+TN A+ A GVN
Sbjct: 474 VRSSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGN*AKNATGVN 340
>gb|CV264055.1|CV264055 WS02023.B21_H24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02023_H24 3', mRNA sequence
Length = 839
Score = 245 bits (529), Expect = 3e-064
Identities = 101/156 (64%), Positives = 124/156 (79%)
Frame = +3 / -2
Query: 99 VVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVC 278
+VI ++L +MK V+VGRR+ SA FQL+FRLIKGLIFITF ++ + LIA+P MT+ D+ VC
Sbjct: 838 IVIILVLFLMKAVAVGRRQLSANFQLLFRLIKGLIFITFISVFITLIALPHMTIRDVIVC 659
Query: 279 ILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVS 458
ILAF+P+GWGL A +P+I G WGS++ LARGYEI+MGLLLFTP+AFLA FVS
Sbjct: 658 ILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVS 479
Query: 459 EFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
EFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 478 EFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 371
Score = 94.1 bits (199), Expect(2) = 3e-035
Identities = 42/89 (47%), Positives = 53/89 (59%)
Frame = -2 / +3
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ P I+G A I PHP G ARMQT S VM G AI++ + V+N+RPL+
Sbjct: 570 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*GSAIKVMNTEIKVMNMRPLM 749
Query: 187 NRNTSWNSALNLLLPTDTVFITSKITKIT 101
+RN SW AL+ LLPT T FI + IT
Sbjct: 750 SRNKSWKFALSCLLPTATAFIKNNTRMIT 836
Score = 74.4 bits (156), Expect(2) = 3e-035
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / +3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
YSLF SFL P IREI RP L AWLNSI VWNS+TN QA+ A GVN
Sbjct: 372 YSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 521
>gb|CV248266.1|CV248266 WS01120.B21_A19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_A19 3', mRNA sequence
Length = 595
Score = 230 bits (496), Expect = 9e-060
Identities = 95/138 (68%), Positives = 112/138 (81%)
Frame = +3 / -2
Query: 153 RFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAI 332
+FSA FQL FRLIKG+IF+TF +I+V LIA+P MTV DIFVCILAFMPTGWG+ A
Sbjct: 594 KFSANFQLAFRLIKGMIFLTFISILVTLIALPHMTVQDIFVCILAFMPTGWGMLLIAQAC 415
Query: 333 RPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQI 512
+P++ + G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GLQI
Sbjct: 414 KPIVQRAGFWGSVQTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQI 235
Query: 513 SRIXXGHKKDXXTXNKE* 566
SRI G +KD + NKE*
Sbjct: 234 SRILGGPRKDRSSRNKE* 181
Score = 115 bits (246), Expect = 3e-025
Identities = 54/138 (39%), Positives = 75/138 (54%)
Frame = +2 / -1
Query: 152 KVQCRVPASVPVDQGSDIYNIYSHRGNPNSDPWHDGAGHICLHPCFHAHWMGFXXDXXSD 331
KVQC +PA VP + G+DI NIY H + + +DGAGH+C+H CFHA+W+G D S
Sbjct: 595 KVQC*LPACVPSN*GNDIPNIYLHSCHFDCTASYDGAGHLCMHSCFHANWLGDAFDCTSM 416
Query: 332 PXCDPQDWALGLDQGSCPGLRDPDGTSPVHAHRLPRLXXVRVGIPDQDAVQPGVQQXSAD 511
LG+ +C LR+ G +PVH+ +P L + V IPD AVQP + SA+
Sbjct: 415 QANRSTSRVLGISSDTCSWLRNRYGLAPVHSSCIPCLVSICV*IPDSYAVQPSI**RSAN 236
Query: 512 LPYXXXTQERXXXXEQRI 565
+E EQ +
Sbjct: 235 FSNSWRPKEGSLFKEQGV 182
Score = 86.8 bits (183), Expect(2) = 4e-036
Identities = 37/50 (74%), Positives = 38/50 (76%)
Frame = -2 / +2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
+SLF SFL P IREICRPLLNAWLNSI VWNSDTN QAR A GVN
Sbjct: 182 HSLFLEERSFLGPPRIREICRPLLNAWLNSIRVWNSDTNGNQARNATGVN 331
Score = 84.9 bits (179), Expect(2) = 4e-036
Identities = 39/71 (54%), Positives = 45/71 (63%)
Frame = -2 / +2
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRPLI 188
+PQ+P G A I P PVGMKARM T MS TV+ G AI++T M +NV NI PLI
Sbjct: 380 DPQNPAR*TIGLHACAIKSIPQPVGMKARMHTKMSCTVI*GSAIKVTRMEINVRNIIPLI 559
Query: 187 NRNTSWNSALN 155
RN SW ALN
Sbjct: 560 RRNASWKLALN 592
>gb|DN493079.1|DN493079 X055G01.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X055G01 3', mRNA sequence
Length = 632
Score = 210 bits (453), Expect = 8e-054
Identities = 86/127 (67%), Positives = 101/127 (79%)
Frame = +3 / -1
Query: 180 FRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGL 359
F LIKG+IF+TF + +V LIA+P MTV D+ VCILAFMPTGWG+ A +PV+ + G
Sbjct: 632 FCLIKGMIFLTFVSNLVTLIALPHMTVQDVIVCILAFMPTGWGMLLIAQACKPVVQRAGF 453
Query: 360 WGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKK 539
WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI GHKK
Sbjct: 452 WGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKK 273
Query: 540 DXXTXNK 560
D + NK
Sbjct: 272 DRSSRNK 252
Score = 133 bits (284), Expect = 2e-030
Identities = 65/128 (50%), Positives = 73/128 (57%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+ LF SFL P IREICRPLLNAWLNSI VWNSDT QAR A GVN
Sbjct: 247 HPLFLEERSFLWPPRIREICRPLLNAWLNSIRVWNSDTKGNQARNATGVNRSKPMTISYP 426
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
+PQ+P TG A I P PVGMKARM T S TV+ G AI++T + V
Sbjct: 427 RASVRTDPQNPAR*TTGLQA*AIKSIPQPVGMKARMHTMTSCTVI*GSAIKVTRLDTKVR 606
Query: 205 NIRPLINR 182
NI PLI +
Sbjct: 607 NIIPLIRQ 630
>gb|DN503094.1|DN503094 X055G01.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X055G01 5', mRNA sequence
Length = 599
Score = 208 bits (449), Expect = 3e-053
Identities = 84/123 (68%), Positives = 99/123 (80%)
Frame = +3 / +1
Query: 192 KGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSI 371
KG+IF+TF +I+V LIA+P MTV D+ VCILAFMPTGWG+ A +PV+ + G WGS+
Sbjct: 13 KGMIFLTFVSILVTLIALPHMTVQDVIVCILAFMPTGWGMLLIAQACKPVVQRAGFWGSV 192
Query: 372 KALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXT 551
+ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI GHKKD +
Sbjct: 193 RTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRSS 372
Query: 552 XNK 560
NK
Sbjct: 373 RNK 381
Score = 133 bits (285), Expect = 1e-030
Identities = 65/127 (51%), Positives = 73/127 (57%)
Frame = -2 / -1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVNXXXXXXXXXX 386
+ LF SFL P IREICRPLLNAWLNSI VWNSDT QAR A GVN
Sbjct: 386 HPLFLEERSFLWPPRIREICRPLLNAWLNSIRVWNSDTKGNQARNATGVNRSKPMTISYP 207
Query: 385 XXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVI 206
+PQ+P TG A I P PVGMKARM T S TV+ G AI++T M V
Sbjct: 206 RASVRTDPQNPAR*TTGLQA*AIKSIPQPVGMKARMHTMTSCTVI*GSAIKVTRMDTKVR 27
Query: 205 NIRPLIN 185
NI PL++
Sbjct: 26 NIIPLLD 6
>gb|CX168355.1|CX168355 A12_69-60_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 664
Score = 193 bits (416), Expect = 1e-048
Identities = 80/125 (64%), Positives = 97/125 (77%)
Frame = +3 / +3
Query: 192 KGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSI 371
+GLIFITF ++ + LIA+P MT+ D+ V ILAF+P+GWGL A +P+I G WGS+
Sbjct: 6 EGLIFITFISVFITLIALPHMTIRDVIVSILAFLPSGWGLLLIAQACKPLIQHAGFWGSV 185
Query: 372 KALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXT 551
+ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD +
Sbjct: 186 RTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTS 365
Query: 552 XNKE* 566
NKE*
Sbjct: 366 RNKE* 380
Score = 74.4 bits (156), Expect(2) = 7e-024
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / -1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
YSLF SFL P IREI RP L AWLNSI VWNS+TN QA+ A GVN
Sbjct: 379 YSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 230
Score = 56.1 bits (116), Expect(2) = 7e-024
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = -2 / -1
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRP 194
+PQ P I+G A I PHP G ARM T S VM G AI++ + V+N+RP
Sbjct: 181 DPQKPACCISGLQACAISSSPHPEGKNARMLTITSRIVM*GSAIKVMNTEIKVMNMRP 8
>gb|CV228298.1|CV228298 WS0191.B21_K13 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0191_K13 3', mRNA sequence
Length = 735
Score = 193 bits (415), Expect = 1e-048
Identities = 79/122 (64%), Positives = 95/122 (77%)
Frame = +3 / -1
Query: 201 IFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKAL 380
IFITF ++ + LIA+P MT+ D+ VCILAF+P+GWGL A +P+I G WGS++ L
Sbjct: 735 IFITFISVFITLIALPHMTIRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTL 556
Query: 381 ARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNK 560
ARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NK
Sbjct: 555 ARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNK 376
Query: 561 E* 566
E*
Sbjct: 375 E* 370
Score = 74.4 bits (156), Expect(2) = 5e-023
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / +2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
YSLF SFL P IREI RP L AWLNSI VWNS+TN QA+ A GVN
Sbjct: 371 YSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 520
Score = 53.3 bits (110), Expect(2) = 5e-023
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = -2 / +2
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVIN 203
+PQ P I+G A I PHP G ARMQT S VM G AI++ + V+N
Sbjct: 569 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*GSAIKVMNTEIKVMN 733
>gb|BU897357.1|BU897357 X055G01 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 426
Score = 138 bits (297), Expect(2) = 5e-048
Identities = 52/81 (64%), Positives = 66/81 (81%)
Frame = +3 / +2
Query: 192 KGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSI 371
KG+IF+TF +I+V LIA+P MTV D+ VCILAFMPTGWG+ A +PV+ + G WGS+
Sbjct: 14 KGMIFLTFVSILVTLIALPHMTVQDVIVCILAFMPTGWGMLLIAQACKPVVQRAGFWGSV 193
Query: 372 KALARGYEILMGLLLFTPIAF 434
+ LARGYEI+MGLLLFTP+AF
Sbjct: 194 RTLARGYEIVMGLLLFTPVAF 256
Score = 73.9 bits (155), Expect(2) = 9e-026
Identities = 31/45 (68%), Positives = 33/45 (73%)
Frame = -2 / -3
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARK 431
+ LF SFL P IREICRPLLNAWLNSI VWNSDT QAR+
Sbjct: 388 HPLFLEERSFLWPPRIREICRPLLNAWLNSIRVWNSDTKGNQARE 254
Score = 72.5 bits (152), Expect(2) = 5e-048
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +3 / +3
Query: 435 LAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNK 560
LA FVSEFQTRMLFNQAFS GLQISRI GHKKD + NK
Sbjct: 258 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRSSRNK 383
Score = 62.9 bits (131), Expect(2) = 9e-026
Identities = 34/82 (41%), Positives = 41/82 (50%)
Frame = -2 / -1
Query: 430 AMGVNXXXXXXXXXXXXXALIEPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVM 251
A GVN +PQ+P TG A I P PVGMKARM T S TV+
Sbjct: 252 ATGVNRSKPMTISYPRASVRTDPQNPAR*TTGLQA*AIKSIPQPVGMKARMHTMTSCTVI 73
Query: 250 PGIAIRITTMAVNVINIRPLIN 185
G AI++T M V NI PL++
Sbjct: 72 *GSAIKVTRMDTKVRNIIPLLD 7
>gb|BU896477.1|BU896477 X041A06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 684
Score = 188 bits (404), Expect = 5e-047
Identities = 77/122 (63%), Positives = 93/122 (76%)
Frame = +3 / +3
Query: 198 LIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKA 377
LIFITF ++ + LIA+P MT+ DI VCILAF+P+GWGL A +P+I G WGS++
Sbjct: 3 LIFITFISVFITLIALPHMTIRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRT 182
Query: 378 LARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXN 557
LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +K+ T
Sbjct: 183 LARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKEDRTSR 362
Query: 558 KE 563
+
Sbjct: 363 NK 368
Score = 68.4 bits (143), Expect(2) = 2e-022
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = -2 / -3
Query: 550 VXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
V SFL P IREI RP L AWLNSI VWNS+TN QA+ A GVN
Sbjct: 355 VRSSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 221
Score = 57.4 bits (119), Expect(2) = 2e-022
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = -2 / -3
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIR 197
+PQ P I+G A I PHP G ARMQT +S VM G AI++ + V+N+R
Sbjct: 172 DPQKPACCISGLQACAISSSPHPEGKNARMQTMISRIVM*GSAIKVMNTEIKVMNMR 2
>gb|BU819078.1|BU819078 UA39BPB02 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 497
Score = 182 bits (392), Expect = 2e-045
Identities = 75/123 (60%), Positives = 91/123 (73%)
Frame = +3 / +3
Query: 195 GLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIK 374
G I ITF ++ + LIA+P MT+ DI VCILAF P+GWGL A +P+I G WGS++
Sbjct: 36 GSILITFISVYITLIALPHMTIRDIIVCILAFCPSGWGLLLIAQACKPLIQHAGFWGSVR 215
Query: 375 ALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTX 554
LARGYEI+MG+LLFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +K+ T
Sbjct: 216 TLARGYEIVMGVLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKEDRTS 395
Query: 555 NKE 563
+
Sbjct: 396 RNK 404
Score = 68.4 bits (143), Expect(2) = 3e-023
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = -2 / -2
Query: 550 VXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
V SFL P IREI RP L AWLNSI VWNS+TN QA+ A GVN
Sbjct: 391 VRSSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 257
Score = 59.7 bits (124), Expect(2) = 3e-023
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = -2 / -2
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIRITTMAVNVINIRP 194
+PQ P I+G A I PHP G ARMQT +S VM G AI++ + VINI P
Sbjct: 208 DPQKPACCISGLQACAISSSPHPEGQNARMQTMISRIVM*GSAIKVMYTEIKVINIDP 35
>gb|CV230081.1|CV230081 WS01915.B21_F22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01915_F22 3', mRNA sequence
Length = 664
Score = 179 bits (386), Expect = 1e-044
Identities = 74/111 (66%), Positives = 87/111 (78%)
Frame = +3 / +2
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLL 413
LIA+P MT+ D+ VCILAF+P+GWGL A +P+I G WGS++ LARGYEI+MGLL
Sbjct: 2 LIALPHMTIRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLL 181
Query: 414 LFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
LFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 182 LFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 334
Score = 74.4 bits (156), Expect(2) = 4e-021
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / -2
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
YSLF SFL P IREI RP L AWLNSI VWNS+TN QA+ A GVN
Sbjct: 333 YSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 184
Score = 46.9 bits (96), Expect(2) = 4e-021
Identities = 22/45 (48%), Positives = 25/45 (55%)
Frame = -2 / -2
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIAIR 233
+PQ P I+G A I PHP G ARMQT S VM G AI+
Sbjct: 135 DPQKPACCISGLQACAISSSPHPEGKNARMQTITSRIVM*GSAIK 1
>gb|AJ772216.1|AJ772216 AJ772216 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700003A08F1, mRNA sequence
Length = 527
Score = 178 bits (383), Expect = 4e-044
Identities = 74/110 (67%), Positives = 86/110 (78%)
Frame = +3 / -1
Query: 237 IAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLL 416
IA+P MT+ DI VCILAF+P+GWGL A +P+I G WGS++ LARGYEI+MGLLL
Sbjct: 527 IALPHMTIRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLL 348
Query: 417 FTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
FTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 347 FTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 198
Score = 74.4 bits (156), Expect(2) = 9e-021
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = -2 / +1
Query: 565 YSLFXVXXSFLCPXXIREICRPLLNAWLNSILVWNSDTNXXQARKAMGVN 416
YSLF SFL P IREI RP L AWLNSI VWNS+TN QA+ A GVN
Sbjct: 199 YSLFLEVRSFLGPPRIREI*RPRLKAWLNSIRVWNSETNGNQAKNATGVN 348
Score = 45.5 bits (93), Expect(2) = 9e-021
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = -2 / +1
Query: 367 EPQSPVLWITGRIAXXIXXKPHPVGMKARMQTNMSSTVMPGIA 239
+PQ P I+G A I PHP G ARMQT +S VM G A
Sbjct: 397 DPQKPACCISGLQACAISSSPHPEGKNARMQTMISRIVM*GSA 525
>gb|CK088908.1|CK088908 A079P12.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A079P12 3', mRNA sequence
Length = 683
Score = 173 bits (373), Expect = 9e-043
Identities = 71/112 (63%), Positives = 85/112 (75%)
Frame = +3 / -1
Query: 228 VILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMG 407
+ LIA+P MT+ DI VCILAF+P+GWGL A +P+I G WGS++ LARGYEI+MG
Sbjct: 683 ITLIALPHMTIRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMG 504
Query: 408 LLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE 563
LLLFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +K+ T +
Sbjct: 503 LLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKEDRTSRNK 348
>gb|CV229682.1|CV229682 WS01914.B21_B17 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01914_B17 3', mRNA sequence
Length = 679
Score = 166 bits (357), Expect = 1e-040
Identities = 68/103 (66%), Positives = 80/103 (77%)
Frame = +3 / -2
Query: 258 VLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFL 437
+ D+ VCILAF+P+GWGL A +P+I G WGS++ LARGYEI+MGLLLFTP+AFL
Sbjct: 678 IRDVIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTPVAFL 499
Query: 438 AXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE* 566
A FVSEFQTRMLFNQAFS GLQISRI G +KD + NKE*
Sbjct: 498 AWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRNKE* 370
>gb|CN522760.1|CN522760 GQ0123.B3_C19 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0123_C19 5', mRNA sequence
Length = 336
Score = 165 bits (355), Expect = 3e-040
Identities = 68/111 (61%), Positives = 84/111 (75%)
Frame = +3 / +1
Query: 141 VGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXX 320
VGRR+ SA FQL+FRLIKGLIFITF ++ + LIA+P MT+ D+ V ILAF+P+GWGL
Sbjct: 1 VGRRQLSANFQLLFRLIKGLIFITFISVFITLIALPHMTIRDVIVSILAFLPSGWGLLLI 180
Query: 321 XXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTR 473
A +P+I G WGS++ LARGYEI+MGLLLFTP+AF FVS TR
Sbjct: 181 AQACKPLIQHAGFWGSVRTLARGYEIVMGLLLFTPVAFXXXFPFVSXXXTR 333
>gb|BU820590.1|BU820590 UB11CPH01 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 510
Score = 161 bits (346), Expect = 5e-039
Identities = 67/121 (55%), Positives = 86/121 (71%)
Frame = +3 / +3
Query: 30 YHLNITKKITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFI 209
Y L I +S LVY SW+ I ++L +MK V+VGRR+ SA FQL+FRLIKGLIFI
Sbjct: 147 YGLVYHLSIVDKTKSFLVYGVSWIGIILVLYLMKAVAVGRRQLSANFQLLFRLIKGLIFI 326
Query: 210 TFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARG 389
TF ++ + LIA+P MT+ DI VCILAF+P+GWGL A +P+I G WGS++ LARG
Sbjct: 327 TFISVFITLIALPHMTIRDIIVCILAFLPSGWGLLLXAQACKPLIQHAGFWGSVRTLARG 506
Query: 390 Y 392
Y
Sbjct: 507 Y 509
>gb|CF232861.1|CF232861 PtaJXO0016F7F0711 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 737
Score = 122 bits (262), Expect(3) = 7e-034
Identities = 53/79 (67%), Positives = 63/79 (79%)
Frame = +3 / +2
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
ITK +S LVY SW+VIF+IL VMKT+SVGRR+FSA FQL FRLIKG+IF+TF +I+V
Sbjct: 455 ITKKTKSFLVYGVSWLVIFLILFVMKTISVGRRKFSANFQLAFRLIKGMIFLTFISILVT 634
Query: 234 LIAIPGMTVLDIFVCILAF 290
LIA+P MT IFVCI F
Sbjct: 635 LIALPHMTXQXIFVCIPCF 691
Score = 30.4 bits (60), Expect(3) = 7e-034
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / +2
Query: 15 RYGLVYHLNITKK 53
+YGLVYHL ITKK
Sbjct: 428 QYGLVYHLTITKK 466
Score = 28.6 bits (56), Expect(3) = 7e-034
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 282 LAFMPTGWGL 311
LAFMPTGWG+
Sbjct: 684 LAFMPTGWGM 713
>gb|CV259929.1|CV259929 WS02012.B21_K15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02012_K15 3', mRNA sequence
Length = 495
Score = 130 bits (278), Expect(2) = 3e-033
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = +3 / -3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +P++ + G WGS++ LARGYEI+MGLLLFTP+AFLA F SEFQTRMLFNQAFS GL
Sbjct: 427 ACKPIVQRAGFWGSVQTLARGYEIVMGLLLFTPVAFLAWFPFGSEFQTRMLFNQAFSRGL 248
Query: 507 QISRIXXGHKKDXXTXNKE* 566
QISRI G +KD + NKE*
Sbjct: 247 QISRIFGGPRKDRFSRNKE* 188
Score = 31.8 bits (63), Expect(2) = 3e-033
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3 / -2
Query: 270 FVCILAFMPTGWGL 311
FV ILAF+PTGWG+
Sbjct: 485 FVGILAFIPTGWGM 444
>gb|CV229637.1|CV229637 WS01913.B21_P11 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01913_P11 3', mRNA sequence
Length = 718
Score = 132 bits (283), Expect = 2e-030
Identities = 56/145 (38%), Positives = 89/145 (61%)
Frame = +3 / -2
Query: 102 VIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCI 281
V+ V +++ V + S FQL+ R ++G+ + A + +++A +++ D+F
Sbjct: 705 VVLVCFVMIFKVFTYSPKRSTSFQLLMRFMQGIASLGLVAALCLIVAFTDLSIPDLFASF 526
Query: 282 LAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSE 461
LAF+ TGW + A + ++ GLW S++ AR Y+ MG+L+F PIAFL+ FVS
Sbjct: 525 LAFIATGWTILSIAIAWKRIVWSLGLWDSVREFARMYDAGMGVLIFVPIAFLSWFPFVST 346
Query: 462 FQTRMLFNQAFSXGLQISRIXXGHK 536
FQ+R+LFNQAFS GL+IS I G+K
Sbjct: 345 FQSRLLFNQAFSRGLEISLILAGNK 271
>gb|BI069529.1|BI069529 C002P54U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 369
Score = 118 bits (253), Expect(2) = 4e-030
Identities = 45/74 (60%), Positives = 57/74 (77%)
Frame = +3 / +2
Query: 219 AIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEI 398
++ + LIA+P MT+ DI VCILAF+P+GWGL A +P+I G WGS++ LARGYEI
Sbjct: 20 SVXITLIALPHMTIRDIIVCILAFLPSGWGLLLIAQACKPLIQHAGFWGSVRTLARGYEI 199
Query: 399 LMGLLLFTPIAFLA 440
MGLLLFTP+AFLA
Sbjct: 200 XMGLLLFTPVAFLA 241
Score = 32.7 bits (65), Expect(2) = 4e-030
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3 / +1
Query: 450 FVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXNKE*G 569
FVSE QTRML NQAF + S + G + +++ G
Sbjct: 250 FVSEXQTRMLXNQAFKSEVFRSPVFFGGPRKEDRTSRKQG 369
>gb|CF235857.1|CF235857 PtaJXT0027H12H1216 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 615
Score = 130 bits (279), Expect = 8e-030
Identities = 56/142 (39%), Positives = 87/142 (61%)
Frame = +3 / +1
Query: 111 VILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAF 290
V L+++ V + S FQL+ R ++G+ + A + + +A +++ D+F LAF
Sbjct: 10 VCLVLIFKVXTYSPKRSTSFQLLMRFMQGIASLGLVAALCLTVAFTDLSIPDLFASFLAF 189
Query: 291 MPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQT 470
+ TGW + A + ++ GLW S++ AR Y+ MG+L+F PIAFL+ FVS FQ+
Sbjct: 190 IATGWTILSIAIAWKRIVWSLGLWDSVREFARMYDAGMGVLIFVPIAFLSWFPFVSTFQS 369
Query: 471 RMLFNQAFSXGLQISRIXXGHK 536
R+LFNQAFS GL+IS I G+K
Sbjct: 370 RLLFNQAFSRGLEISLILAGNK 435
>gb|CK096914.1|CK096914 UB32BPD05.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB32BPD05 3', mRNA sequence
Length = 579
Score = 130 bits (279), Expect = 8e-030
Identities = 55/117 (47%), Positives = 74/117 (63%)
Frame = +3 / -3
Query: 186 LIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWG 365
L K +FI AI++IL ++ +++ D+ VC LAF+PTGWGL A RP I +TGLW
Sbjct: 478 LFKAFLFIAVLAIIIILSSVCDLSMKDLIVCCLAFLPTGWGLILIAQAARPKIEETGLWH 299
Query: 366 SIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
+ LAR Y+ M ++LF P+A LA +S FQTR LFN+AF+ LQI I G K
Sbjct: 298 FTRVLARAYDYGMSVVLFAPVAVLAWLPVISAFQTRFLFNEAFNRHLQIQPILAGKK 128
>gb|CN518891.1|CN518891 GQ0102.B3_E01 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0102_E01 5', mRNA sequence
Length = 508
Score = 127 bits (273), Expect = 5e-029
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = +3 / +1
Query: 30 YHLNITKKITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFI 209
Y L I +S LVY SW+VI ++L +MK V+VGRR+ SA FQL+FRLIKGLIFI
Sbjct: 196 YGLVYHLSIVDKTKSFLVYGVSWIVIILVLFLMKAVAVGRRQLSANFQLLFRLIKGLIFI 375
Query: 210 TFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGL 311
TF ++ + LIA+P MT+ D+ V ILAF+P+GWGL
Sbjct: 376 TFISVFITLIALPHMTIRDVIVSILAFLPSGWGL 477
>gb|BU891366.1|BU891366 P049D09 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 371
Score = 126 bits (269), Expect = 2e-028
Identities = 52/86 (60%), Positives = 61/86 (70%)
Frame = +3 / +3
Query: 306 GLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFN 485
G+ A +PV + G WGS++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRML N
Sbjct: 3 GMLLIAQACKPVAQRAGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLVN 182
Query: 486 QAFSXGLQISRIXXGHKKDXXTXNKE 563
QAF+ GLQ S GH KD + NKE
Sbjct: 183 QAFNRGLQTSSTLGGHNKDRSSRNKE 260
>gb|AC149540.1| Populus trichocarpa clone Pop1-111J19, complete sequence
Length = 96953
Score = 94.1 bits (199), Expect(2) = 1e-027
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 327 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGL 506
A +PV+ + GLW SI+++AR Y+ MG+L+F PIAFL+ FVS FQTR++FNQAFS GL
Sbjct: 30903 AWKPVVKRMGLWKSIRSIARLYDAGMGMLIFIPIAFLSWFPFVSTFQTRLMFNQAFSRGL 31082
Query: 507 QISRIXXGH 533
+IS I G+
Sbjct: 31083 EISLILAGN 31109
Score = 58.3 bits (121), Expect(2) = 1e-027
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +3 / +1
Query: 150 RRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGL 311
++ S FQL+ R ++G+ F+ A +VI +A+ ++V DIF ILAF+PT WG+
Sbjct: 30004 QKVSVNFQLLLRFVQGVSFMLALAGIVIAVALTELSVSDIFASILAFIPTIWGI 30165
>gb|BP933403.1|BP933403 BP933403 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-050_P13.r 3', mRNA sequence
Length = 620
Score = 114 bits (243), Expect = 7e-025
Identities = 48/114 (42%), Positives = 69/114 (60%)
Frame = +3 / -2
Query: 195 GLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIK 374
G+ + A + + +A ++ D+F LAF+ TGW + A + ++ GLW S++
Sbjct: 619 GIASLGLVAALCLTVAFTDQSIPDLFASFLAFIATGWTILSIAIAWKRIVWSLGLWDSVR 440
Query: 375 ALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
AR Y+ MG L+F PIAFL+ FVS FQ R+LFNQAFS GL+IS I G+K
Sbjct: 439 EFARMYDAGMGALIFVPIAFLSWFPFVSTFQPRLLFNQAFSRGLEISLILAGNK 278
>gb|CN517705.1|CN517705 GQ0092.B3_H22 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0092_H22 5', mRNA sequence
Length = 481
Score = 112 bits (240), Expect = 2e-024
Identities = 49/66 (74%), Positives = 55/66 (83%)
Frame = +3 / +3
Query: 369 IKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXX 548
++ LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD
Sbjct: 3 VRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRT 182
Query: 549 TXNKE* 566
+ NKE*
Sbjct: 183 SRNKE* 200
>gb|BP932002.1|BP932002 BP932002 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-030_I23.r 3', mRNA sequence
Length = 587
Score = 111 bits (236), Expect = 7e-024
Identities = 46/102 (45%), Positives = 65/102 (63%)
Frame = +3 / -1
Query: 231 ILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGL 410
+ +A ++ D+F LAF+ TGW + A + ++ GLW S++ AR Y+ MG
Sbjct: 581 LTVAFTDSSIPDLFASFLAFIATGWTILSIAIAWKRIVWSLGLWDSVREFARMYDAGMGA 402
Query: 411 LLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
L+F PIAFL+ FVS FQ+R+LFNQAFS GL+IS I G+K
Sbjct: 401 LIFVPIAFLSWFPFVSTFQSRLLFNQAFSRGLEISLILAGNK 276
>gb|CN549860.1|CN549860 GQ0243.B3_A18 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0243_A18 5', mRNA sequence
Length = 536
Score = 110 bits (235), Expect = 9e-024
Identities = 49/63 (77%), Positives = 53/63 (84%)
Frame = +3 / +1
Query: 378 LARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHKKDXXTXN 557
LARGYEI+MGLLLFTP+AFLA FVSEFQTRMLFNQAFS GLQISRI G +KD + N
Sbjct: 1 LARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGPRKDRTSRN 180
Query: 558 KE* 566
KE*
Sbjct: 181 KE* 189
>gb|DT469857.1|DT469857 WS01919.C21_B19 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01919_B19 3', mRNA sequence
Length = 651
Score = 107 bits (229), Expect = 6e-023
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = +3 / -2
Query: 288 FMPTGWGLXXXXXAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQ 467
F+PT WG+ A +PV+ + GLW SI+++AR Y+ MG+L+F PIAFL+ FVS FQ
Sbjct: 650 FIPTIWGILSIASAWKPVMKRMGLWKSIRSIARLYDAGMGMLIFIPIAFLSWFPFVSTFQ 471
Query: 468 TRMLFNQAFSXGLQISRIXXGH 533
TR++FNQAFS GL+IS I G+
Sbjct: 470 TRLMFNQAFSRGLEISLILAGN 405
>gb|BU891564.1|BU891564 P052B10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 558
Score = 63.8 bits (133), Expect(2) = 2e-022
Identities = 23/97 (23%), Positives = 47/97 (48%)
Frame = +3 / +2
Query: 54 ITKDNQSVLVYCFSWVVIFVILLVMKTVSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVI 233
I + ++ VY SW+ + V R +++A+ + + +++ LI +++
Sbjct: 83 IAAGSTTIAVYILSWIYVLVAFAFFLMAPYARNKYAAKEHIYYPMVQFLIIELGIFVIIA 262
Query: 234 LIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAIRPVI 344
L+ D+F +LAF+PTGWG+ +RP +
Sbjct: 263 LLQSTSFKFTDVFTSLLAFIPTGWGILLIAQVLRPFL 373
Score = 61.6 bits (128), Expect(2) = 2e-022
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = +3 / +2
Query: 357 LWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXG 530
LW ++ ++AR Y+IL G+++ P+AFL+ QT +LFN+AFS GL+I ++ G
Sbjct: 383 LWEAVVSVARLYDILFGVIVMVPVAFLSWMPAFQSMQTTILFNEAFSRGLRIFQLFTG 556
>gb|DT485310.1|DT485310 WS02527.B21_N20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_N20 3', mRNA sequence
Length = 840
Score = 65.7 bits (137), Expect(2) = 6e-022
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +3 / -3
Query: 357 LWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
LW ++ ++AR Y+IL G+++ P+AFL+ QTR+LFN+AFS GL+I ++ G K
Sbjct: 589 LWEAVVSVARLYDILFGVIVMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIFQLFTGKK 410
Score = 58.3 bits (121), Expect(2) = 6e-022
Identities = 19/70 (27%), Positives = 40/70 (57%)
Frame = +3 / -3
Query: 135 VSVGRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLX 314
V+ R +++A+ + +R+++ LI + +++ L+ D+F +LAF+PTGWG+
Sbjct: 808 VAYARNKYAAKEHIYYRMVQFLIIVLGIFVIIALLQFTSFKFTDVFTSLLAFIPTGWGIL 629
Query: 315 XXXXAIRPVI 344
+RP +
Sbjct: 628 LIAQVLRPFL 599
>gb|BU813345.1|BU813345 N009C11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 182
Score = 101 bits (215), Expect = 5e-021
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = +3 / +1
Query: 144 GRRRFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGL 311
GRR+FSA F L FRLIKG+IF+TF +I+V LIA+P MT DIF CILAFMPTGWG+
Sbjct: 1 GRRKFSANFHLAFRLIKGMIFLTFISILVTLIALPHMTAQDIFECILAFMPTGWGM 168
>gb|CF233701.1|CF233701 PtaJXO0026F5F0511 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 654
Score = 65.7 bits (137), Expect(2) = 9e-021
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +3 / +1
Query: 357 LWGSIKALARGYEILMGLLLFTPIAFLAXXXFVSEFQTRMLFNQAFSXGLQISRIXXGHK 536
LW ++ ++AR Y+IL G+++ P+AFL+ QTR+LFN+AFS GL+I ++ G K
Sbjct: 205 LWEAVVSVARLYDILFGVIVMVPVAFLSWMPGFQSMQTRILFNEAFSRGLRIFQLFTGKK 384
Score = 54.2 bits (112), Expect(2) = 9e-021
Identities = 17/64 (26%), Positives = 37/64 (57%)
Frame = +3 / +1
Query: 153 RFSAEFQLVFRLIKGLIFITFTAIVVILIAIPGMTVLDIFVCILAFMPTGWGLXXXXXAI 332
+++A+ + +R+++ LI + +++ L+ D+F +LAF+PTGWG+ +
Sbjct: 4 KYAAKEHIYYRMVQFLIIVLGIFVIIALLQFTSFKFTDVFTSLLAFIPTGWGILLIAQVL 183
Query: 333 RPVI 344
RP +
Sbjct: 184 RPFL 195
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 257,379,122
Number of Sequences: 369679
Number of extensions: 3200984
Number of successful extensions: 24427
Number of sequences better than 1.0e-020: 55
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 8938642720
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)