TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404863.2.1
(672 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU834125.1|BU834125 T057B09 Populus apical shoot cDNA li... 196 1e-049
gb|CK103295.1|CK103295 G111P56.5pR Populus tension wood cDN... 196 1e-049
gb|BU893572.1|BU893572 P079E11 Populus petioles cDNA librar... 191 3e-048
gb|CA925749.1|CA925749 MTU7TL.P5.D09 Aspen leaf cDNA Librar... 191 3e-048
gb|CF233991.1|CF233991 PtaJXO1B11B1103 Poplar cDNA library ... 191 3e-048
gb|CN520831.1|CN520831 GQ0108.B3_C09 GQ010 Populus trichoca... 191 3e-048
gb|CK319456.1|CK319456 X9P11a03 Populus stem seasonal libra... 191 3e-048
gb|AJ767248.1|AJ767248 AJ767248 Populus euphratica leaf adu... 191 3e-048
gb|CV243493.1|CV243493 WS0252.B21_A11 PT-MB-N-A-15 Populus ... 191 3e-048
gb|CV261044.1|CV261044 WS02015.B21_L08 PTxN-IB-N-A-11 Popul... 191 3e-048
gb|CV268494.1|CV268494 WS0205.B21_K08 PTxN-IB-N-A-11 Populu... 191 3e-048
gb|CV272637.1|CV272637 WS0158.B21_D22 PTxN-IB-A-6 Populus t... 191 3e-048
gb|DN494269.1|DN494269 K019P78.5pR Populus apical shoot cDN... 191 3e-048
gb|DT522999.1|DT522999 WS02038.B21_I04 PTxN-IB-N-A-11 Popul... 191 3e-048
gb|CV255021.1|CV255021 WS02411.B21_N12 PTxD-ICC-N-A-14 Popu... 191 5e-048
gb|BU896882.1|BU896882 X047C09 Populus wood cDNA library Po... 189 1e-047
gb|CN523749.1|CN523749 GQ015M11.T3_F10 GQ015 Populus tricho... 188 2e-047
gb|CK317839.1|CK317839 B9P02d09 Populus stem seasonal libra... 188 2e-047
gb|CK093203.1|CK093203 G111P56.3pR Populus tension wood cDN... 188 4e-047
gb|BU815980.1|BU815980 N058E11 Populus bark cDNA library Po... 185 2e-046
gb|CF119018.1|CF119018 MTU10CS.P12.D11 Aspen stem cDNA Libr... 184 5e-046
gb|CF119541.1|CF119541 MTU10CS.P3.B11 Aspen stem cDNA Libra... 184 5e-046
gb|CF119878.1|CF119878 MTU10CS.P7.D09 Aspen stem cDNA Libra... 184 5e-046
gb|CK089268.1|CK089268 B007P10.3pR Hybrid aspen plasmid lib... 182 1e-045
gb|CK115917.1|CK115917 Y017C02 Populus infected leaf substr... 178 2e-044
gb|AI167104.1|AI167104 xylem.est.870 Poplar xylem Lambda ZA... 106 5e-043
gb|AI162882.1|AI162882 A026P17U Hybrid aspen plasmid librar... 139 5e-043
gb|DT469942.1|DT469942 WS01919.C21_G06 PT-DX-N-A-10 Populus... 114 3e-040
gb|BP933667.1|BP933667 BP933667 full-length enriched poplar... 151 5e-036
gb|CK319636.1|CK319636 B9SP06d09 Populus stem seasonal libr... 150 9e-036
gb|BU898025.1|BU898025 X073E11 Populus wood cDNA library Po... 136 2e-031
gb|CN521463.1|CN521463 GQ0111.B3_E11 GQ011 Populus trichoca... 133 8e-031
gb|AJ776489.1|AJ776489 AJ776489 Populus euphratica root 3-6... 126 2e-028
gb|AI165115.1|AI165115 A075p46u Hybrid aspen plasmid librar... 106 3e-025
gb|DN484786.1|DN484786 K019P78.3pR Populus apical shoot cDN... 114 7e-025
gb|BI069273.1|BI069273 C034P61U Populus strain T89 leaves P... 104 5e-022
>gb|BU834125.1|BU834125 T057B09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 758
Score = 196 bits (422), Expect = 1e-049
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+++ GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVG+WARIENMTILGEDVH GD
Sbjct: 296 GPGCIIDSGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGRWARIENMTILGEDVHVGD 475
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 476 EVYSNGGVVLPHKEIKSSILKPEIVM* 556
Score = 96.8 bits (205), Expect(2) = 7e-025
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
++V+FS+RAH PTVECHP++L EM ACFLIRTPR+TVQRESLTP S PG
Sbjct: 450 KIVMFSMRAHLPTVECHPMILLEMHACFLIRTPRITVQRESLTPESIMQPG 298
Score = 36.8 bits (74), Expect(2) = 7e-025
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2 / -3
Query: 263 SHMTISGFKMLDLISFCGR 207
+HMTISGFKMLD IS GR
Sbjct: 558 AHMTISGFKMLDFISL*GR 502
>gb|CK103295.1|CK103295 G111P56.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G111P56 5', mRNA sequence
Length = 548
Score = 196 bits (422), Expect = 1e-049
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+++ GVRLSRCTVMRGVRIKKHACIS+SIIGWHSTVG+WARIENMTILGEDVH GD
Sbjct: 201 GPGCIIDSGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGRWARIENMTILGEDVHVGD 380
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 381 EVYSNGGVVLPHKEIKSSILKPEIVM* 461
Score = 96.8 bits (205), Expect(2) = 7e-025
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
++V+FS+RAH PTVECHP++L EM ACFLIRTPR+TVQRESLTP S PG
Sbjct: 355 KIVMFSMRAHLPTVECHPMILLEMHACFLIRTPRITVQRESLTPESIMQPG 203
Score = 36.8 bits (74), Expect(2) = 7e-025
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2 / -2
Query: 263 SHMTISGFKMLDLISFCGR 207
+HMTISGFKMLD IS GR
Sbjct: 463 AHMTISGFKMLDFISL*GR 407
>gb|BU893572.1|BU893572 P079E11 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 582
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 59 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 238
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 239 EIYSNGGVVLPHKEIKSSILKPEIVM* 319
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 213 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 61
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 318 HITISGFKMLDLISLWGK 265
>gb|CA925749.1|CA925749 MTU7TL.P5.D09 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 713
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 445 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 266
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 265 EIYSNGGVVLPHKEIKSSILKPEIVM* 185
Score = 101 bits (215), Expect(2) = 6e-026
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = -2 / +3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L ++QACFL+RTPR+T QRESLTP ST HPG
Sbjct: 291 RIVKFSTRAHCPTVECHPMILLDIQACFLMRTPRITEQRESLTPDSTMHPG 443
Score = 35.9 bits (72), Expect(2) = 6e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 186 HITISGFKMLDLISLWGK 239
>gb|CF233991.1|CF233991 PtaJXO1B11B1103 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 633
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 69 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 248
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 249 EIYSNGGVVLPHKEIKSSILKPEIVM* 329
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 223 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 71
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 328 HITISGFKMLDLISLWGK 275
>gb|CN520831.1|CN520831 GQ0108.B3_C09 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_C09 5', mRNA sequence
Length = 810
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 319 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 498
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 499 EIYSNGGVVLPHKEIKSSILKPEIVM* 579
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 473 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 321
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 578 HITISGFKMLDLISLWGK 525
>gb|CK319456.1|CK319456 X9P11a03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 343
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 74 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 253
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 254 EIYSNGGVVLPHKEIKSSILKPEIVM* 334
Score = 103 bits (219), Expect(2) = 1e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 228 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 76
Score = 35.9 bits (72), Expect(2) = 1e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 333 HITISGFKMLDLISLWGK 280
>gb|AJ767248.1|AJ767248 AJ767248 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100003F02F1, mRNA sequence
Length = 685
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 191 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 370
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 371 EIYSNGGVVLPHKEIKSSILKPEIVM* 451
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 345 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 193
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 450 HITISGFKMLDLISLWGK 397
>gb|CV243493.1|CV243493 WS0252.B21_A11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0252_A11 3', mRNA sequence
Length = 837
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 527 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 348
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 347 EIYSNGGVVLPHKEIKSSILKPEIVM* 267
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 373 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 525
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 268 HITISGFKMLDLISLWGK 321
>gb|CV261044.1|CV261044 WS02015.B21_L08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02015_L08 3', mRNA sequence
Length = 891
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / -1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 528 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 349
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 348 EIYSNGGVVLPHKEIKSSILKPEIVM* 268
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / +2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 374 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 526
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 269 HITISGFKMLDLISLWGK 322
>gb|CV268494.1|CV268494 WS0205.B21_K08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_K08 3', mRNA sequence
Length = 697
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / -3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 518 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 339
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 338 EIYSNGGVVLPHKEIKSSILKPEIVM* 258
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 364 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 516
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 259 HITISGFKMLDLISLWGK 312
>gb|CV272637.1|CV272637 WS0158.B21_D22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_D22 3', mRNA sequence
Length = 763
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 375 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 196
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 195 EIYSNGGVVLPHKEIKSSILKPEIVM* 115
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / +2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 221 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 373
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 116 HITISGFKMLDLISLWGK 169
>gb|DN494269.1|DN494269 K019P78.5pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K019P78 5', mRNA sequence
Length = 588
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 258 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 437
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 438 EIYSNGGVVLPHKEIKSSILKPEIVM* 518
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 412 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 260
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 517 HITISGFKMLDLISLWGK 464
>gb|DT522999.1|DT522999 WS02038.B21_I04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02038_I04 3', mRNA sequence
Length = 843
Score = 191 bits (412), Expect = 3e-048
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +1 / -1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 528 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 349
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 348 EIYSNGGVVLPHKEIKSSILKPEIVM* 268
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / +2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 374 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 526
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 269 HITISGFKMLDLISLWGK 322
>gb|CV255021.1|CV255021 WS02411.B21_N12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_N12 3', mRNA sequence
Length = 902
Score = 191 bits (411), Expect = 5e-048
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +1 / -1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVR+KKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 530 GPGCIVESGVRLSRCSVMRGVRVKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 351
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 350 EIYSNGGVVLPHKEIKSSILKPEIVM* 270
Score = 102 bits (217), Expect(2) = 3e-026
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL RTPR+T QRESLTP ST HPG
Sbjct: 376 RIVKFSTRAHCPTVECHPMILLDMQACFLTRTPRITEQRESLTPDSTMHPG 528
Score = 35.9 bits (72), Expect(2) = 3e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 271 HITISGFKMLDLISLWGK 324
>gb|BU896882.1|BU896882 X047C09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 580
Score = 189 bits (408), Expect = 1e-047
Identities = 76/87 (87%), Positives = 82/87 (94%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 202 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 381
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEI M*
Sbjct: 382 EIYSNGGVVLPHKEIKSSILKPEIAM* 462
Score = 103 bits (219), Expect(2) = 8e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 356 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 204
Score = 33.6 bits (67), Expect(2) = 8e-026
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+ ISGFKMLDLIS G+
Sbjct: 461 HIAISGFKMLDLISLWGK 408
>gb|CN523749.1|CN523749 GQ015M11.T3_F10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M11_F10 5', mRNA sequence
Length = 738
Score = 188 bits (406), Expect = 2e-047
Identities = 76/87 (87%), Positives = 82/87 (94%)
Frame = +1 / -3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGV IKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 547 GPGCIVESGVRLSRCSVMRGVXIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 368
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 367 EIYSNGGVVLPHKEIKSSILKPEIVM* 287
Score = 100 bits (213), Expect(2) = 1e-025
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = -2 / +3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+ TPR+T QRESLTP ST HPG
Sbjct: 393 RIVKFSTRAHCPTVECHPMILLDMQACFLMXTPRITEQRESLTPDSTMHPG 545
Score = 35.9 bits (72), Expect(2) = 1e-025
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 288 HITISGFKMLDLISLWGK 341
>gb|CK317839.1|CK317839 B9P02d09 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 642
Score = 188 bits (406), Expect = 2e-047
Identities = 76/87 (87%), Positives = 82/87 (94%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+ N+TILGEDVH D
Sbjct: 88 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVXNLTILGEDVHVCD 267
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 268 EIYSNGGVVLPHKEIKSSILKPEIVM* 348
Score = 101 bits (215), Expect(2) = 6e-026
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V F RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 242 RIVKFXTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 90
Score = 35.9 bits (72), Expect(2) = 6e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 347 HITISGFKMLDLISLWGK 294
>gb|CK093203.1|CK093203 G111P56.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G111P56 3', mRNA sequence
Length = 716
Score = 188 bits (404), Expect = 4e-047
Identities = 76/87 (87%), Positives = 81/87 (93%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+++ GVRLSRCTVMRGVRIKKHACI +SIIGWHSTVG+WARIENM ILGEDVH GD
Sbjct: 418 GPGCIIDSGVRLSRCTVMRGVRIKKHACIFSSIIGWHSTVGRWARIENMPILGEDVHVGD 239
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIK SILKPEIVM*
Sbjct: 238 EVYSNGGVVLPHKEIKFSILKPEIVM* 158
Score = 91.8 bits (194), Expect(2) = 1e-022
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = -2 / +3
Query: 146 IFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
+FS+RAH PTVECHP++L +M ACFLIRTPR+TVQRESLTP S PG
Sbjct: 273 MFSMRAHLPTVECHPMILLKMHACFLIRTPRITVQRESLTPESIMQPG 416
Score = 34.5 bits (69), Expect(2) = 1e-022
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -2 / +3
Query: 263 SHMTISGFKMLDLISFCGR 207
+HMTISGFKML+ IS GR
Sbjct: 156 AHMTISGFKMLNFISL*GR 212
>gb|BU815980.1|BU815980 N058E11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 547
Score = 185 bits (399), Expect = 2e-046
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +1 / +1
Query: 7 GCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEV 186
GC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH DE+
Sbjct: 1 GCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCDEI 180
Query: 187 YSNGGVVLPQKEIKSSILKPEIVM* 261
YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 181 YSNGGVVLPHKEIKSSILKPEIVM* 255
Score = 97.3 bits (206), Expect(2) = 1e-024
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTH 9
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST H
Sbjct: 149 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMH 3
Score = 35.9 bits (72), Expect(2) = 1e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 254 HITISGFKMLDLISLWGK 201
>gb|CF119018.1|CF119018 MTU10CS.P12.D11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 787
Score = 184 bits (396), Expect = 5e-046
Identities = 75/87 (86%), Positives = 81/87 (93%)
Frame = +1 / -3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGV IKKHACIS+SIIGWHSTVG+WAR+ENMTILGEDV D
Sbjct: 566 GPGCIVESGVRLSRCSVMRGVYIKKHACISSSIIGWHSTVGRWARVENMTILGEDVQVCD 387
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 386 EIYSNGGVVLPHKEIKSSILKPEIVM* 306
Score = 96.4 bits (204), Expect(2) = 2e-024
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FS RAH PTVECHP++L +MQACFL+ TPR+T QRESLTP ST HPG
Sbjct: 412 RIVMFSTRAHLPTVECHPMILLDMQACFLM*TPRITEQRESLTPDSTMHPG 564
Score = 35.9 bits (72), Expect(2) = 2e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 307 HITISGFKMLDLISLWGK 360
>gb|CF119541.1|CF119541 MTU10CS.P3.B11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 590
Score = 184 bits (396), Expect = 5e-046
Identities = 75/87 (86%), Positives = 81/87 (93%)
Frame = +1 / -1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGV IKKHACIS+SIIGWHSTVG+WAR+ENMTILGEDV D
Sbjct: 566 GPGCIVESGVRLSRCSVMRGVYIKKHACISSSIIGWHSTVGRWARVENMTILGEDVQVCD 387
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 386 EIYSNGGVVLPHKEIKSSILKPEIVM* 306
Score = 96.4 bits (204), Expect(2) = 2e-024
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FS RAH PTVECHP++L +MQACFL+ TPR+T QRESLTP ST HPG
Sbjct: 412 RIVMFSTRAHLPTVECHPMILLDMQACFLM*TPRITEQRESLTPDSTMHPG 564
Score = 35.9 bits (72), Expect(2) = 2e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 307 HITISGFKMLDLISLWGK 360
>gb|CF119878.1|CF119878 MTU10CS.P7.D09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 599
Score = 184 bits (396), Expect = 5e-046
Identities = 75/87 (86%), Positives = 81/87 (93%)
Frame = +1 / -1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGV IKKHACIS+SIIGWHSTVG+WAR+ENMTILGEDV D
Sbjct: 566 GPGCIVESGVRLSRCSVMRGVYIKKHACISSSIIGWHSTVGRWARVENMTILGEDVQVCD 387
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 386 EIYSNGGVVLPHKEIKSSILKPEIVM* 306
Score = 96.4 bits (204), Expect(2) = 2e-024
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V+FS RAH PTVECHP++L +MQACFL+ TPR+T QRESLTP ST HPG
Sbjct: 412 RIVMFSTRAHLPTVECHPMILLDMQACFLM*TPRITEQRESLTPDSTMHPG 564
Score = 35.9 bits (72), Expect(2) = 2e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 307 HITISGFKMLDLISLWGK 360
>gb|CK089268.1|CK089268 B007P10.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B007P10 3', mRNA sequence
Length = 800
Score = 182 bits (393), Expect = 1e-045
Identities = 74/87 (85%), Positives = 81/87 (93%)
Frame = +1 / -1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRL RC+VMRGVRIKKHACIS+SIIGWHS VGQWAR++N+TILGEDVH D
Sbjct: 551 GPGCIVESGVRL*RCSVMRGVRIKKHACISSSIIGWHSPVGQWARVKNLTILGEDVHVCD 372
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 371 EIYSNGGVVLPPKEIKSSILKPEIVM* 291
Score = 93.2 bits (197), Expect(2) = 2e-023
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = -2 / +1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V F RAHCPT ECHP++L +MQACFL+RTPR+T QR SLTP ST HPG
Sbjct: 397 RIVKFFTRAHCPTGECHPMILLDMQACFLMRTPRITEQR*SLTPDSTMHPG 549
Score = 35.4 bits (71), Expect(2) = 2e-023
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / +1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 292 HITISGFKMLDLISLGGK 345
>gb|CK115917.1|CK115917 Y017C02 Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y017C02 5', mRNA sequence
Length = 531
Score = 178 bits (384), Expect = 2e-044
Identities = 73/83 (87%), Positives = 79/83 (95%)
Frame = +1 / +2
Query: 13 VVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYS 192
+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH DE+YS
Sbjct: 11 IVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCDEIYS 190
Query: 193 NGGVVLPQKEIKSSILKPEIVM* 261
NGGVVLP KEIKSSILKPEIVM*
Sbjct: 191 NGGVVLPHKEIKSSILKPEIVM* 259
Score = 94.1 bits (199), Expect(2) = 9e-024
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSST 15
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST
Sbjct: 153 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDST 13
Score = 35.9 bits (72), Expect(2) = 9e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 258 HITISGFKMLDLISLWGK 205
>gb|AI167104.1|AI167104 xylem.est.870 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 569
Score = 106 bits (227), Expect(2) = 5e-043
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWA 132
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWA
Sbjct: 124 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWA 255
Score = 93.6 bits (198), Expect(2) = 7e-027
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = -2 / -1
Query: 131 AHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
AHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 254 AHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 126
Score = 87.7 bits (185), Expect(2) = 5e-043
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +1 / +3
Query: 133 RIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSSILKPEIVM* 261
R+EN+TILGEDVH DE+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 255 RVENLTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 383
Score = 46.9 bits (96), Expect(2) = 7e-027
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = -1 / -1
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILY 136
SH+ L LQNA* DLF+ N+T++AV +T M+I ++D +LY
Sbjct: 383 SHNYLWLQNA*FDLFVG*NHTSVAVNFITNMDIFSEDC*VLY 258
>gb|AI162882.1|AI162882 A026P17U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 440
Score = 139 bits (298), Expect(2) = 5e-043
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 102 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 281
Query: 181 EV 186
E+
Sbjct: 282 EI 287
Score = 103 bits (219), Expect(2) = 2e-026
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
R+V FS RAHCPTVECHP++L +MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 256 RIVKFSTRAHCPTVECHPMILLDMQACFLMRTPRITEQRESLTPDSTMHPG 104
Score = 55.1 bits (114), Expect(2) = 5e-043
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1 / +2
Query: 187 YSNGGVVLPQKEIKSSILKPEIVM* 261
YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 287 YSNGGVVLPHKEIKSSILKPEIVM* 361
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCGR 207
H+TISGFKMLDLIS G+
Sbjct: 360 HITISGFKMLDLISLWGK 307
>gb|DT469942.1|DT469942 WS01919.C21_G06 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01919_G06 3', mRNA sequence
Length = 549
Score = 114 bits (243), Expect(2) = 3e-040
Identities = 46/54 (85%), Positives = 50/54 (92%)
Frame = +1 / +1
Query: 100 IGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSSILKPEIVM* 261
IGWHS+VGQWAR+EN+ ILGEDVH DE+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 199 IGWHSSVGQWARVENLPILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 360
Score = 71.2 bits (149), Expect(2) = 3e-040
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1 / +3
Query: 4 PGCVVEDGVRLSRCTVMRGVRIKKHACISNSI 99
PGC+VE GVRLSRC+VMRGVRIKKHACIS+ I
Sbjct: 102 PGCIVESGVRLSRCSVMRGVRIKKHACISSGI 197
Score = 62.0 bits (129), Expect(2) = 1e-021
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -1 / -1
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPD 100
SH+ LRLQNA* DLF+ N+T++AV +T M+I ++D +LY PL N VP D
Sbjct: 360 SHNYLRLQNA*FDLFVG*NHTSVAVNFITNMDIFSEDW*VLYTGPLPNGGVPSD 199
Score = 60.6 bits (126), Expect(2) = 1e-021
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -2 / -3
Query: 89 EMQACFLIRTPRMTVQRESLTPSSTTHPG 3
+MQACFL+RTPR+T QRESLTP ST HPG
Sbjct: 187 DMQACFLMRTPRITEQRESLTPDSTMHPG 101
>gb|BP933667.1|BP933667 BP933667 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-055_A07.r 3', mRNA sequence
Length = 473
Score = 151 bits (324), Expect = 5e-036
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = +1 / -1
Query: 55 RGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSS 234
RGVRIKKHACIS SIIGWHSTVGQWAR+EN+TILGEDVH DE+YSNGGVVLP KEIKSS
Sbjct: 473 RGVRIKKHACISTSIIGWHSTVGQWARVENLTILGEDVHVCDEIYSNGGVVLPHKEIKSS 294
Query: 235 ILKPEIVM* 261
ILKPEIVM*
Sbjct: 293 ILKPEIVM* 267
>gb|CK319636.1|CK319636 B9SP06d09 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 480
Score = 150 bits (322), Expect = 9e-036
Identities = 58/68 (85%), Positives = 64/68 (94%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMR VRIKKHACIS+SIIGWHSTVGQWAR+EN+TILGEDVH D
Sbjct: 277 GPGCIVESGVRLSRCSVMRVVRIKKHACISSSIIGWHSTVGQWARVENLTILGEDVHVCD 456
Query: 181 EVYSNGGV 204
E+YSNGGV
Sbjct: 457 EIYSNGGV 480
>gb|BU898025.1|BU898025 X073E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 478
Score = 136 bits (291), Expect = 2e-031
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +1 / +2
Query: 76 HACISNSIIGWHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSSILKPEIV 255
HACIS+SIIGWHSTVGQWAR+EN+TILGEDVH DE+YSNGGVVLP KEIKSSILKPEIV
Sbjct: 2 HACISSSIIGWHSTVGQWARVENLTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIV 181
Query: 256 M* 261
M*
Sbjct: 182 M* 187
>gb|CN521463.1|CN521463 GQ0111.B3_E11 GQ011 Populus trichocarpa x Populus deltoides cDNA
clone GQ0111_E11 5', mRNA sequence
Length = 260
Score = 133 bits (286), Expect = 8e-031
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+VE GVRLSRC+VMRGV IKKHACIS+SIIGWHSTVG+WAR+ENMTILGE D
Sbjct: 63 GPGCIVESGVRLSRCSVMRGVYIKKHACISSSIIGWHSTVGRWARVENMTILGEXXXVCD 242
Query: 181 EVYSN 195
E+YSN
Sbjct: 243 EIYSN 257
>gb|AJ776489.1|AJ776489 AJ776489 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400013H12F1, mRNA sequence
Length = 328
Score = 126 bits (269), Expect = 2e-028
Identities = 48/62 (77%), Positives = 55/62 (88%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGC+ GVRLSRC+VMRGV IKKHACIS+SIIGWHSTVG+WAR++NMTILGEDV D
Sbjct: 143 GPGCIAASGVRLSRCSVMRGVYIKKHACISSSIIGWHSTVGRWARVQNMTILGEDVQVCD 322
Query: 181 EV 186
E+
Sbjct: 323 EI 328
>gb|AI165115.1|AI165115 A075p46u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 400
Score = 106 bits (227), Expect(2) = 3e-025
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWA 132
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHSTVGQWA
Sbjct: 164 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTVGQWA 295
Score = 28.1 bits (55), Expect(2) = 3e-025
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1 / +1
Query: 133 RIENMTILGEDV 168
R+EN+TILGEDV
Sbjct: 295 RVENLTILGEDV 330
>gb|DN484786.1|DN484786 K019P78.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K019P78 3', mRNA sequence
Length = 449
Score = 114 bits (243), Expect = 7e-025
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +1 / -2
Query: 106 WHSTVGQWARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSSILKPEIVM* 261
WHSTVGQWAR+EN+TILGEDVH DE+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 406 WHSTVGQWARVENLTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 251
>gb|BI069273.1|BI069273 C034P61U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 375
Score = 104 bits (222), Expect = 5e-022
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVH 171
GPGC+VE GVRLSRC+VMRGVRIKKHACIS+SIIGWHST A +TILGE H
Sbjct: 46 GPGCIVESGVRLSRCSVMRGVRIKKHACISSSIIGWHSTRWAMAPCRELTILGERCH 216
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 350,512,601
Number of Sequences: 369679
Number of extensions: 4822721
Number of successful extensions: 50199
Number of sequences better than 1.0e-020: 45
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 8419272548
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)