TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404858.2.1
(958 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT514900.1|DT514900 WS02426.B21_B10 PTxD-ICC-N-A-14 Popu... 105 2e-056
gb|DT513520.1|DT513520 WS02422.B21_E11 PTxD-ICC-N-A-14 Popu... 105 2e-056
gb|DT508912.1|DT508912 WS02422.BR_E11 PTxD-ICC-N-A-14 Popul... 105 1e-055
gb|DT510276.1|DT510276 WS02426.BR_B10 PTxD-ICC-N-A-14 Popul... 105 1e-055
gb|CV256650.1|CV256650 WS0244.B21_H01 PTxD-ICC-N-A-14 Popul... 105 2e-054
gb|CV266853.1|CV266853 WS02030.B21_C12 PTxN-IB-N-A-11 Popul... 117 8e-050
gb|CV283544.1|CV283544 WS0187.B21_K01 PTxD-IL-N-A-9 Populus... 118 8e-050
gb|CV253444.1|CV253444 WS0221.B21_P08 PTxD-ICC-A-12 Populus... 88 1e-049
gb|DT489747.1|DT489747 WS02543.B21_B04 PT-MB-N-A-15 Populus... 115 7e-049
gb|DT492894.1|DT492894 WS02552.C21_M09 PT-MB-N-A-15 Populus... 115 7e-049
gb|CV266675.1|CV266675 WS0203.B21_K19 PTxN-IB-N-A-11 Populu... 116 4e-047
gb|DT523606.1|DT523606 WS02040.B21_C12 PTxN-IB-N-A-11 Popul... 116 4e-047
gb|CV254153.1|CV254153 WS0224.B21_D03 PTxD-ICC-A-12 Populus... 87 4e-047
gb|CV272143.1|CV272143 WS0156.B21.1_M15 PTxN-IB-A-6 Populus... 107 1e-046
gb|CK095589.1|CK095589 UA15CPD06.3pR Populus dormant cambiu... 101 2e-044
gb|DT519739.1|DT519739 WS02443.B21_I12 PTxD-ICC-N-A-14 Popu... 151 1e-042
gb|DN488225.1|DN488225 R042E08.3pR Populus root cDNA librar... 83 1e-040
gb|BU837391.1|BU837391 T101C08 Populus apical shoot cDNA li... 68 7e-035
gb|CN519417.1|CN519417 GQ0102.B3_D01 GQ010 Populus trichoca... 79 2e-034
gb|DN496279.1|DN496279 P053C09.5pR Populus petioles cDNA li... 68 1e-033
gb|BU891645.1|BU891645 P053C09 Populus petioles cDNA librar... 68 1e-033
gb|CV271278.1|CV271278 WS0154.B21_E07 PTxN-IB-A-6 Populus t... 77 2e-033
gb|CV250989.1|CV250989 WS0115.B21_H22 PT-P-FL-A-2 Populus t... 77 2e-033
gb|DT525784.1|DT525784 WS02046.C21_E14 PTxN-IB-N-A-11 Popul... 62 2e-032
gb|DN499762.1|DN499762 T084E12.5pR Populus shoot meristem c... 56 4e-032
gb|CN519800.1|CN519800 GQ0106.B3_E11 GQ010 Populus trichoca... 100 5e-032
gb|BU868463.1|BU868463 M116B09 Populus flower cDNA library ... 137 1e-031
gb|DN485187.1|DN485187 M116B09.3pR Populus female catkins c... 137 1e-031
gb|DN494650.1|DN494650 M116B09.5pR Populus female catkins c... 137 1e-031
gb|DV465077.1|DV465077 MTUNUL1.P34.F12 NUL Populus fremonti... 137 1e-031
gb|DN500307.1|DN500307 UK117TA09.5pR Populus apical shoot c... 90 2e-031
gb|CV131227.1|CV131227 L1P09h07 Populus stem seasonal libra... 103 2e-031
gb|CA926763.1|CA926763 MTU6CR.P18.H05 Aspen root cDNA Libra... 79 5e-031
gb|BU817310.1|BU817310 UA15CPD06 Populus tremula cambium cD... 101 2e-030
gb|DT511857.1|DT511857 WS02417.B21_K09 PTxD-ICC-N-A-14 Popu... 61 8e-029
gb|CN549250.1|CN549250 GQ0243.B3_B20 GQ024 Populus trichoca... 78 3e-026
gb|CN192959.1|CN192959 PtdH2038 hybrid poplar systemically ... 118 4e-026
gb|AJ774985.1|AJ774985 AJ774985 Populus euphratica shoot 3-... 117 8e-026
gb|CN518319.1|CN518319 GQ0094.B3_K04 GQ009 Populus trichoca... 117 1e-025
gb|DN490337.1|DN490337 UK117TA09.3pR Populus apical shoot c... 80 3e-025
gb|CN518395.1|CN518395 GQ0091.B3_H24 GQ009 Populus trichoca... 115 4e-025
gb|CX175895.1|CX175895 E11_69-104_09.ab1 leaf inoculated wi... 86 4e-025
gb|CA824431.1|CA824431 R41H11 two-month-old roots from clon... 113 2e-024
gb|CB833373.1|CB833373 R19E06 two-month-old roots from clon... 113 2e-024
gb|BU836266.1|BU836266 T084E12 Populus apical shoot cDNA li... 56 2e-024
gb|CV273040.1|CV273040 WS0171.B21_H16 PTxD-NR-A-8 Populus t... 84 5e-024
gb|BU884372.1|BU884372 R009G06 Populus root cDNA library Po... 56 7e-024
gb|BU884371.1|BU884371 R009G05 Populus root cDNA library Po... 56 1e-023
gb|BU814736.1|BU814736 N032E06 Populus bark cDNA library Po... 80 1e-023
gb|DT507209.1|DT507209 WS02417.BR_K09 PTxD-ICC-N-A-14 Popul... 75 7e-023
gb|CX174750.1|CX174750 F01_69-26_11.ab1 leaf inoculated wit... 108 7e-023
gb|BU892235.1|BU892235 P061B03 Populus petioles cDNA librar... 105 3e-022
gb|AJ773328.1|AJ773328 AJ773328 Populus euphratica leaf 3-6... 105 3e-022
gb|CV257398.1|CV257398 WS0246.B21_I23 PTxD-ICC-N-A-14 Popul... 95 4e-022
gb|CN524072.1|CN524072 GQ015M06.T3_G12 GQ015 Populus tricho... 78 6e-022
gb|CF230302.1|CF230302 PtaC0006E2E0210 Poplar cDNA library ... 102 3e-021
gb|BU826138.1|BU826138 UK117TA09 Populus apical shoot cDNA ... 90 4e-021
>gb|DT514900.1|DT514900 WS02426.B21_B10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_B10 3', mRNA sequence
Length = 901
Score = 105 bits (225), Expect(3) = 2e-056
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / -1
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFER 195
LG ++YVHCDVT E T+G LDIMFNNAG++ + + ++ K DFER
Sbjct: 844 LGPSNSTYVHCDVTDEAQVKNAVNAAVTTYGKLDIMFNNAGIADESKARIIDNEKVDFER 665
Query: 196 VLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
VL N+ G FLG KHAARVM+P R G I
Sbjct: 664 VLQTNVTGVFLGIKHAARVMIPGRNGTII 578
Score = 87.7 bits (185), Expect(3) = 2e-056
Identities = 38/85 (44%), Positives = 48/85 (56%)
Frame = +1 / -1
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II C+K A++ LT+NAA ELGQ GIRVNC+SP +ATPL
Sbjct: 595 RNGTIISTASVSSKVGAAASHAYCCSKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPL 416
Query: 448 TMRYMGLEAEALEQAMEGMANLKGV 522
+ +GL+ E LE M + LKGV
Sbjct: 415 AKQVIGLDDEQLENLMHALGTLKGV 341
Score = 65.2 bits (136), Expect(3) = 2e-056
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1 / -1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+ DVA A +LASD+ARY+SGHNLF+DGG ++ NPS
Sbjct: 337 LQAEDVANAALYLASDEARYVSGHNLFIDGGFTIQNPS 224
Score = 57.9 bits (120), Expect(5) = 5e-026
Identities = 33/82 (40%), Positives = 41/82 (50%)
Frame = -3 / +3
Query: 512 RLAMPSIACSNASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAY 333
R+ I S+ S+SRP+ GVA+ G+ QFT MP PSS AAF V A Y
Sbjct: 351 RVPKACIKFSSCSSSRPITCFAKGVASA*GDKQFTLMPNCPSSTAAFLVSPRTACLEQQY 530
Query: 332 AYDDTPVTAAATLDVPMMQPPR 267
A + T TL V +M P R
Sbjct: 531 ACEAAAPTFELTLAVEIMVPLR 596
Score = 45.1 bits (92), Expect(5) = 5e-026
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -3 / +3
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLS 168
P R G +TRAACL+PR P TRSKS LS
Sbjct: 588 PLRPGIMTRAACLMPRKTPVTLVCRTRSKSTFSLS 692
Score = 40.0 bits (81), Expect(5) = 5e-026
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / +3
Query: 641 DGFATEIPPSTNRLWPLMYLASSLAR 564
DGF PPS N+L PL YLASSLAR
Sbjct: 225 DGF*MVKPPSMNKLCPLTYLASSLAR 302
Score = 29.0 bits (57), Expect(5) = 5e-026
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3 / +3
Query: 137 PALLNMMSSAPNVXXXXXXXXXXXXXXXXSQWT*LAAPAPRS 12
PALLN+MSS P V SQ T*+ PR+
Sbjct: 723 PALLNIMSSLP*VVTAAFTAFFTWASSVTSQCT*VEFDGPRA 848
Score = 23.5 bits (45), Expect(5) = 5e-026
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +2
Query: 942 FFFFFLGQ 919
FFFFFLGQ
Sbjct: 2 FFFFFLGQ 25
>gb|DT513520.1|DT513520 WS02422.B21_E11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_E11 3', mRNA sequence
Length = 796
Score = 105 bits (225), Expect(3) = 2e-056
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / -2
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFER 195
LG ++YVHCDVT E T+G LDIMFNNAG++ + + ++ K DFER
Sbjct: 765 LGPSNSTYVHCDVTDEAQVKNAVNAAVTTYGKLDIMFNNAGIADESKARIIDNEKVDFER 586
Query: 196 VLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
VL N+ G FLG KHAARVM+P R G I
Sbjct: 585 VLQTNVTGVFLGIKHAARVMIPGRNGTII 499
Score = 87.7 bits (185), Expect(3) = 2e-056
Identities = 38/85 (44%), Positives = 48/85 (56%)
Frame = +1 / -2
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II C+K A++ LT+NAA ELGQ GIRVNC+SP +ATPL
Sbjct: 516 RNGTIISTASVSSKVGAAASHAYCCSKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPL 337
Query: 448 TMRYMGLEAEALEQAMEGMANLKGV 522
+ +GL+ E LE M + LKGV
Sbjct: 336 AKQVIGLDDEQLENLMHALGTLKGV 262
Score = 65.2 bits (136), Expect(3) = 2e-056
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1 / -2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+ DVA A +LASD+ARY+SGHNLF+DGG ++ NPS
Sbjct: 258 LQAEDVANAALYLASDEARYVSGHNLFIDGGFTIQNPS 145
Score = 57.9 bits (120), Expect(4) = 1e-025
Identities = 33/82 (40%), Positives = 41/82 (50%)
Frame = -3 / +2
Query: 512 RLAMPSIACSNASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAY 333
R+ I S+ S+SRP+ GVA+ G+ QFT MP PSS AAF V A Y
Sbjct: 272 RVPKACIKFSSCSSSRPITCFAKGVASA*GDKQFTLMPNCPSSTAAFLVSPRTACLEQQY 451
Query: 332 AYDDTPVTAAATLDVPMMQPPR 267
A + T TL V +M P R
Sbjct: 452 ACEAAAPTFELTLAVEIMVPLR 517
Score = 45.1 bits (92), Expect(4) = 1e-025
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -3 / +2
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLS 168
P R G +TRAACL+PR P TRSKS LS
Sbjct: 509 PLRPGIMTRAACLMPRKTPVTLVCRTRSKSTFSLS 613
Score = 40.0 bits (81), Expect(4) = 1e-025
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / +2
Query: 641 DGFATEIPPSTNRLWPLMYLASSLAR 564
DGF PPS N+L PL YLASSLAR
Sbjct: 146 DGF*MVKPPSMNKLCPLTYLASSLAR 223
Score = 29.0 bits (57), Expect(4) = 1e-025
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3 / +2
Query: 137 PALLNMMSSAPNVXXXXXXXXXXXXXXXXSQWT*LAAPAPRS 12
PALLN+MSS P V SQ T*+ PR+
Sbjct: 644 PALLNIMSSLP*VVTAAFTAFFTWASSVTSQCT*VEFDGPRA 769
>gb|DT508912.1|DT508912 WS02422.BR_E11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_E11 5', mRNA sequence
Length = 913
Score = 105 bits (225), Expect(3) = 1e-055
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / +1
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFER 195
LG ++YVHCDVT E T+G LDIMFNNAG++ + + ++ K DFER
Sbjct: 244 LGPSNSTYVHCDVTDEAQVKNAVNAAVTTYGKLDIMFNNAGIADESKARIIDNEKVDFER 423
Query: 196 VLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
VL N+ G FLG KHAARVM+P R G I
Sbjct: 424 VLQTNVTGVFLGIKHAARVMIPGRNGTII 510
Score = 87.7 bits (185), Expect(3) = 1e-055
Identities = 38/85 (44%), Positives = 48/85 (56%)
Frame = +1 / +1
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II C+K A++ LT+NAA ELGQ GIRVNC+SP +ATPL
Sbjct: 493 RNGTIISTASVSSKVGAAASHAYCCSKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPL 672
Query: 448 TMRYMGLEAEALEQAMEGMANLKGV 522
+ +GL+ E LE M + LKGV
Sbjct: 673 AKQVIGLDDEQLENLMHALGTLKGV 747
Score = 62.5 bits (130), Expect(3) = 1e-055
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +1 / +1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+ DVA A +LASD+ARY+SGHNLF+DGG ++ PS
Sbjct: 751 LQAEDVANAALYLASDEARYVSGHNLFIDGGFTIQKPS 864
Score = 57.9 bits (120), Expect(4) = 1e-025
Identities = 33/82 (40%), Positives = 41/82 (50%)
Frame = -3 / -3
Query: 512 RLAMPSIACSNASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAY 333
R+ I S+ S+SRP+ GVA+ G+ QFT MP PSS AAF V A Y
Sbjct: 737 RVPKACIKFSSCSSSRPITCFAKGVASA*GDKQFTLMPNCPSSTAAFLVSPRTACLEQQY 558
Query: 332 AYDDTPVTAAATLDVPMMQPPR 267
A + T TL V +M P R
Sbjct: 557 ACEAAAPTFELTLAVEIMVPLR 492
Score = 45.1 bits (92), Expect(4) = 1e-025
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -3 / -3
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLS 168
P R G +TRAACL+PR P TRSKS LS
Sbjct: 500 PLRPGIMTRAACLMPRKTPVTLVCRTRSKSTFSLS 396
Score = 40.0 bits (81), Expect(4) = 1e-025
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / -3
Query: 641 DGFATEIPPSTNRLWPLMYLASSLAR 564
DGF PPS N+L PL YLASSLAR
Sbjct: 863 DGF*MVKPPSMNKLCPLTYLASSLAR 786
Score = 29.0 bits (57), Expect(4) = 1e-025
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3 / -3
Query: 137 PALLNMMSSAPNVXXXXXXXXXXXXXXXXSQWT*LAAPAPRS 12
PALLN+MSS P V SQ T*+ PR+
Sbjct: 365 PALLNIMSSLP*VVTAAFTAFFTWASSVTSQCT*VEFDGPRA 240
>gb|DT510276.1|DT510276 WS02426.BR_B10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_B10 5', mRNA sequence
Length = 878
Score = 105 bits (225), Expect(3) = 1e-055
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / +3
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFER 195
LG ++YVHCDVT E T+G LDIMFNNAG++ + + ++ K DFER
Sbjct: 237 LGPSNSTYVHCDVTDEAQVKNAVNAAVTTYGKLDIMFNNAGIADESKARIIDNEKVDFER 416
Query: 196 VLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
VL N+ G FLG KHAARVM+P R G I
Sbjct: 417 VLQTNVTGVFLGIKHAARVMIPGRNGTII 503
Score = 87.7 bits (185), Expect(3) = 1e-055
Identities = 38/85 (44%), Positives = 48/85 (56%)
Frame = +1 / +3
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II C+K A++ LT+NAA ELGQ GIRVNC+SP +ATPL
Sbjct: 486 RNGTIISTASVSSKVGAAASHAYCCSKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPL 665
Query: 448 TMRYMGLEAEALEQAMEGMANLKGV 522
+ +GL+ E LE M + LKGV
Sbjct: 666 AKQVIGLDDEQLENLMHALGTLKGV 740
Score = 62.5 bits (130), Expect(3) = 1e-055
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+ DVA A +LASD+ARY+SGHNLF+DGG ++ PS
Sbjct: 744 LQAEDVANAALYLASDEARYVSGHNLFIDGGFTIQTPS 857
Score = 57.9 bits (120), Expect(4) = 8e-025
Identities = 33/82 (40%), Positives = 41/82 (50%)
Frame = -3 / -2
Query: 512 RLAMPSIACSNASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAY 333
R+ I S+ S+SRP+ GVA+ G+ QFT MP PSS AAF V A Y
Sbjct: 730 RVPKACIKFSSCSSSRPITCFAKGVASA*GDKQFTLMPNCPSSTAAFLVSPRTACLEQQY 551
Query: 332 AYDDTPVTAAATLDVPMMQPPR 267
A + T TL V +M P R
Sbjct: 550 ACEAAAPTFELTLAVEIMVPLR 485
Score = 45.1 bits (92), Expect(4) = 8e-025
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -3 / -2
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLS 168
P R G +TRAACL+PR P TRSKS LS
Sbjct: 493 PLRPGIMTRAACLMPRKTPVTLVCRTRSKSTFSLS 389
Score = 36.8 bits (74), Expect(4) = 8e-025
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3 / -2
Query: 641 DGFATEIPPSTNRLWPLMYLASSLAR 564
DG PPS N+L PL YLASSLAR
Sbjct: 856 DGV*MVKPPSMNKLCPLTYLASSLAR 779
Score = 29.0 bits (57), Expect(4) = 8e-025
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3 / -2
Query: 137 PALLNMMSSAPNVXXXXXXXXXXXXXXXXSQWT*LAAPAPRS 12
PALLN+MSS P V SQ T*+ PR+
Sbjct: 358 PALLNIMSSLP*VVTAAFTAFFTWASSVTSQCT*VEFDGPRA 233
>gb|CV256650.1|CV256650 WS0244.B21_H01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_H01 3', mRNA sequence
Length = 850
Score = 105 bits (225), Expect(3) = 2e-054
Identities = 44/89 (49%), Positives = 55/89 (61%)
Frame = +1 / -1
Query: 16 LGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFER 195
LG ++YVHCDVT E T+G LDIMFNNAG++ + + ++ K DFER
Sbjct: 844 LGPSNSTYVHCDVTDEAQVKNAVNAAVTTYGKLDIMFNNAGIADESKARIIDNEKVDFER 665
Query: 196 VLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
VL N+ G FLG KHAARVM+P R G I
Sbjct: 664 VLQTNVTGVFLGIKHAARVMIPGRNGTII 578
Score = 85.4 bits (180), Expect(3) = 2e-054
Identities = 37/85 (43%), Positives = 46/85 (54%)
Frame = +1 / -1
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II C+K A++ LT+NAA ELGQ GIRVNC+SP +ATPL
Sbjct: 595 RNGTIISTASVSSKVGAAASHAYCCSKHAVLRLTKNAAVELGQFGIRVNCLSPYALATPL 416
Query: 448 TMRYMGLEAEALEQAMEGMANLKGV 522
+ +G + E LE M LKGV
Sbjct: 415 AKQVIGFDDEQLENLMHAFGTLKGV 341
Score = 60.6 bits (126), Expect(3) = 2e-054
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +1 / -1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+ DVA A +LASD+ARY+SG NLF+DGG ++ NPS
Sbjct: 337 LQAEDVANAALYLASDEARYVSGPNLFIDGGFTIQNPS 224
Score = 57.9 bits (120), Expect(4) = 2e-025
Identities = 32/82 (39%), Positives = 42/82 (51%)
Frame = -3 / +3
Query: 512 RLAMPSIACSNASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAY 333
R+ I S+ S+S+P+ GVA+ G+ QFT MP PSS AAF V + A Y
Sbjct: 351 RVPKACIKFSSCSSSKPITCFAKGVASA*GDKQFTLMPNCPSSTAAFLVSLKTACLEQQY 530
Query: 332 AYDDTPVTAAATLDVPMMQPPR 267
A + T TL V +M P R
Sbjct: 531 ACEAAAPTFELTLAVEIMVPLR 596
Score = 45.5 bits (93), Expect(4) = 2e-025
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -3 / +3
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLS 168
P R G +TRAACL+PR P TRSKS LS
Sbjct: 588 PLRPGIMTRAACLMPRKTPVTLVCKTRSKSTFSLS 692
Score = 38.6 bits (78), Expect(4) = 2e-025
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -3 / +3
Query: 641 DGFATEIPPSTNRLWPLMYLASSLAR 564
DGF PPS N+L PL YLASSLA+
Sbjct: 225 DGF*MVKPPSMNKLGPLTYLASSLAK 302
Score = 29.0 bits (57), Expect(4) = 2e-025
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3 / +3
Query: 137 PALLNMMSSAPNVXXXXXXXXXXXXXXXXSQWT*LAAPAPRS 12
PALLN+MSS P V SQ T*+ PR+
Sbjct: 723 PALLNIMSSLP*VVTAAFTAFFTWASSVTSQCT*VEFDGPRA 848
>gb|CV266853.1|CV266853 WS02030.B21_C12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_C12 3', mRNA sequence
Length = 912
Score = 117 bits (251), Expect(3) = 8e-050
Identities = 49/93 (52%), Positives = 62/93 (66%)
Frame = +1 / -3
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAGV ++ ++GKA
Sbjct: 733 VCEELKTESASFVHCDVTQETDVENAVNTAVSKHGKLDIMFNNAGVVDSPKPNILDNGKA 554
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+V+ VN+VG FLGTKHAARVM+P+RRG I
Sbjct: 553 EFEKVITVNIVGTFLGTKHAARVMIPARRGSII 455
Score = 85.4 bits (180), Expect(4) = 6e-032
Identities = 45/90 (50%), Positives = 48/90 (53%)
Frame = -3 / +3
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL*HAGPLTPALLNMMSSAPNVXX 93
PRR G ITRAACLVP+N PT FT T S SALPLS TPALLNMMSS P +
Sbjct: 465 PRRAGIITRAACLVPKNVPTIFTVMTFSNSALPLSSMFGFGESTTPALLNMMSSFPCLET 644
Query: 92 XXXXXXXXXXXXXXSQWT*LAAPAPRSAQT 3
SQWT A S+QT
Sbjct: 645 AVLTAFSTSVS*VTSQWTNEADSVFNSSQT 734
Score = 59.7 bits (124), Expect(3) = 8e-050
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1 / -3
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L N A ELGQHGIRVNCVSP V TP+
Sbjct: 472 RRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVELGQHGIRVNCVSPYAVLTPM 293
Query: 448 TMRYMGLE 471
++ L+
Sbjct: 292 MKSFLKLD 269
Score = 58.8 bits (122), Expect(3) = 8e-050
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANP 639
L+ D+A A FL SD+++Y+SGHNL VDGG ++ NP
Sbjct: 223 LKAEDIAEAALFLGSDESKYVSGHNLIVDGGFTIVNP 113
Score = 57.9 bits (120), Expect(4) = 6e-032
Identities = 30/71 (42%), Positives = 37/71 (52%)
Frame = -3 / +3
Query: 479 ASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAYAYDDTPVTAAA 300
+S+S L + GV T G+TQFTRMPC P+S A F + F A D TP
Sbjct: 261 SSSSSLRKLFIIGVKTA*GDTQFTRMPCCPNSTAVFLINPITPCFELV*ACDATPPIVPQ 440
Query: 299 TLDVPMMQPPR 267
TL V +M P R
Sbjct: 441 TLAVDIMLPRR 473
Score = 32.2 bits (64), Expect(4) = 6e-032
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / +3
Query: 620 PPSTNRLWPLMYLASSLARK 561
PPST +L PL YL SSL RK
Sbjct: 132 PPSTIKLCPLTYLDSSLPRK 191
Score = 23.5 bits (45), Expect(4) = 6e-032
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 942 FFFFFLGQSYL 910
FFFFFL ++YL
Sbjct: 2 FFFFFLKKTYL 34
>gb|CV283544.1|CV283544 WS0187.B21_K01 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0187_K01 3', mRNA sequence
Length = 887
Score = 118 bits (253), Expect(3) = 8e-050
Identities = 48/93 (51%), Positives = 64/93 (68%)
Frame = +1 / -3
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAG++G ++ ++ KA
Sbjct: 714 VCEELKTESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIAGSPKPNILDNDKA 535
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+V++VN+VG FLGTKHAARVM+P+RRG I
Sbjct: 534 EFEKVISVNIVGAFLGTKHAARVMIPARRGSII 436
Score = 80.8 bits (170), Expect(3) = 9e-030
Identities = 43/90 (47%), Positives = 46/90 (51%)
Frame = -3 / +2
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL*HAGPLTPALLNMMSSAPNVXX 93
PRR G ITRAACLVP+N PT T T S SAL LS P PALLNMMSS P +
Sbjct: 446 PRRAGIITRAACLVPKNAPTILTLMTFSNSALSLSSMFGFGEPAIPALLNMMSSFPCLET 625
Query: 92 XXXXXXXXXXXXXXSQWT*LAAPAPRSAQT 3
SQWT A S+QT
Sbjct: 626 AVLTAFSTSFS*VTSQWTNEADSVFNSSQT 715
Score = 61.6 bits (128), Expect(3) = 8e-050
Identities = 28/74 (37%), Positives = 36/74 (48%)
Frame = +1 / -3
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ LT N A ELGQHGIRVNCVSP V TPL
Sbjct: 453 RRGSIISTASVCGTIGGVASHAYTSSKHGVIGLTRNTAVELGQHGIRVNCVSPYVVLTPL 274
Query: 448 TMRYMGLEAEALEQ 489
+ L+ + + +
Sbjct: 273 VKDFFKLDDDEVNR 232
Score = 56.1 bits (116), Expect(3) = 8e-050
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1 / -3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANP 639
L+ D+A A FL SD+++Y+SGHNL VDGG + NP
Sbjct: 204 LKAEDIAEAALFLGSDESKYVSGHNLIVDGGFTNVNP 94
Score = 55.6 bits (115), Expect(3) = 9e-030
Identities = 30/71 (42%), Positives = 36/71 (50%)
Frame = -3 / +2
Query: 479 ASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAYAYDDTPVTAAA 300
+S+S +GV T G+TQFTRMPC P+S A F V F A D TP
Sbjct: 242 SSSSSLKKSFTNGVRTT*GDTQFTRMPCCPNSTAVFLVNPITPCFELV*ACDATPPIVPQ 421
Query: 299 TLDVPMMQPPR 267
TL V +M P R
Sbjct: 422 TLAVDIMLPRR 454
Score = 32.2 bits (64), Expect(3) = 9e-030
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / +2
Query: 620 PPSTNRLWPLMYLASSLARK 561
PPST +L PL YL SSL RK
Sbjct: 113 PPSTIKLCPLTYLDSSLPRK 172
>gb|CV253444.1|CV253444 WS0221.B21_P08 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_P08 3', mRNA sequence
Length = 732
Score = 87.7 bits (185), Expect(3) = 1e-049
Identities = 38/85 (44%), Positives = 48/85 (56%)
Frame = +1 / -3
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II C+K A++ LT+NAA ELGQ GIRVNC+SP +ATPL
Sbjct: 559 RNGTIISTASVSSKVGAAASHAYCCSKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPL 380
Query: 448 TMRYMGLEAEALEQAMEGMANLKGV 522
+ +GL+ E LE M + LKGV
Sbjct: 379 AKQVIGLDDEQLENLMHALGTLKGV 305
Score = 83.1 bits (175), Expect(3) = 1e-049
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +1 / -3
Query: 100 TFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGC 279
T+G LDIMFNNAG++ + + ++ K DFERVL N+ G FLG KHAARVM+P R G
Sbjct: 724 TYGKLDIMFNNAGIADESKARIIDNEKVDFERVLQTNVTGVFLGIKHAARVMIPGRNGTI 545
Query: 280 I 282
I
Sbjct: 544 I 542
Score = 65.2 bits (136), Expect(3) = 1e-049
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1 / -3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+ DVA A +LASD+ARY+SGHNLF+DGG ++ NPS
Sbjct: 301 LQAEDVANAALYLASDEARYVSGHNLFIDGGFTIQNPS 188
Score = 57.9 bits (120), Expect(4) = 4e-024
Identities = 33/82 (40%), Positives = 41/82 (50%)
Frame = -3 / +3
Query: 512 RLAMPSIACSNASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAY 333
R+ I S+ S+SRP+ GVA+ G+ QFT MP PSS AAF V A Y
Sbjct: 315 RVPKACIKFSSCSSSRPITCFAKGVASA*GDKQFTLMPNCPSSTAAFLVSPRTACLEQQY 494
Query: 332 AYDDTPVTAAATLDVPMMQPPR 267
A + T TL V +M P R
Sbjct: 495 ACEAAAPTFELTLAVEIMVPLR 560
Score = 45.1 bits (92), Expect(4) = 4e-024
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -3 / +3
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLS 168
P R G +TRAACL+PR P TRSKS LS
Sbjct: 552 PLRPGIMTRAACLMPRKTPVTLVCRTRSKSTFSLS 656
Score = 40.0 bits (81), Expect(4) = 4e-024
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / +3
Query: 641 DGFATEIPPSTNRLWPLMYLASSLAR 564
DGF PPS N+L PL YLASSLAR
Sbjct: 189 DGF*MVKPPSMNKLCPLTYLASSLAR 266
Score = 23.5 bits (45), Expect(4) = 4e-024
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 137 PALLNMMSSAP 105
PALLN+MSS P
Sbjct: 687 PALLNIMSSLP 719
>gb|DT489747.1|DT489747 WS02543.B21_B04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02543_B04 3', mRNA sequence
Length = 894
Score = 115 bits (246), Expect(3) = 7e-049
Identities = 48/93 (51%), Positives = 62/93 (66%)
Frame = +1 / -3
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAG+ G ++ ++ KA
Sbjct: 715 VCEELKTESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIVGTPKPNILDNDKA 536
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+V++VN+VG FLGTKHAARVM+P RRG I
Sbjct: 535 EFEKVISVNVVGAFLGTKHAARVMIPVRRGSII 437
Score = 81.3 bits (171), Expect(3) = 9e-030
Identities = 43/90 (47%), Positives = 46/90 (51%)
Frame = -3 / +3
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL*HAGPLTPALLNMMSSAPNVXX 93
PRR G ITRAACLVP+N PT T T S SAL LS P PALLNMMSS P +
Sbjct: 447 PRRTGIITRAACLVPKNAPTTLTLMTFSNSALSLSSMFGFGVPTIPALLNMMSSFPCLET 626
Query: 92 XXXXXXXXXXXXXXSQWT*LAAPAPRSAQT 3
SQWT A S+QT
Sbjct: 627 AVLTAFSTSFS*VTSQWTNEADSVFNSSQT 716
Score = 58.8 bits (122), Expect(3) = 7e-049
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANP 639
L+ D+A A FL SD+++Y+SGHNL VDGG ++ NP
Sbjct: 205 LKAEDIAEAALFLGSDESKYVSGHNLIVDGGFTIVNP 95
Score = 58.8 bits (122), Expect(3) = 7e-049
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = +1 / -3
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L N A ELGQHGIRVNCVSP V TPL
Sbjct: 454 RRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVELGQHGIRVNCVSPYVVLTPL 275
Query: 448 TMRYMGLEAEALEQ 489
+ L+ + + +
Sbjct: 274 VKDFFKLDDDEVNR 233
Score = 55.1 bits (114), Expect(3) = 9e-030
Identities = 29/71 (40%), Positives = 36/71 (50%)
Frame = -3 / +3
Query: 479 ASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAYAYDDTPVTAAA 300
+S+S +GV T G+TQFTRMPC P+S A F + F A D TP
Sbjct: 243 SSSSSLKKSFTNGVKTT*GDTQFTRMPCCPNSTAVFLINPITPCFELV*ACDATPPIVPQ 422
Query: 299 TLDVPMMQPPR 267
TL V +M P R
Sbjct: 423 TLAVEIMLPRR 455
Score = 32.2 bits (64), Expect(3) = 9e-030
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / +3
Query: 620 PPSTNRLWPLMYLASSLARK 561
PPST +L PL YL SSL RK
Sbjct: 114 PPSTIKLCPLTYLDSSLPRK 173
>gb|DT492894.1|DT492894 WS02552.C21_M09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02552_M09 3', mRNA sequence
Length = 846
Score = 115 bits (246), Expect(3) = 7e-049
Identities = 48/93 (51%), Positives = 62/93 (66%)
Frame = +1 / -1
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAG+ G ++ ++ KA
Sbjct: 756 VCEELKTESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIVGTPKPNILDNDKA 577
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+V++VN+VG FLGTKHAARVM+P RRG I
Sbjct: 576 EFEKVISVNVVGAFLGTKHAARVMIPVRRGSII 478
Score = 81.3 bits (171), Expect(3) = 9e-030
Identities = 43/90 (47%), Positives = 46/90 (51%)
Frame = -3 / +2
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL*HAGPLTPALLNMMSSAPNVXX 93
PRR G ITRAACLVP+N PT T T S SAL LS P PALLNMMSS P +
Sbjct: 488 PRRTGIITRAACLVPKNAPTTLTLMTFSNSALSLSSMFGFGVPTIPALLNMMSSFPCLET 667
Query: 92 XXXXXXXXXXXXXXSQWT*LAAPAPRSAQT 3
SQWT A S+QT
Sbjct: 668 AVLTAFSTSFS*VTSQWTNEADSVFNSSQT 757
Score = 58.8 bits (122), Expect(3) = 7e-049
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1 / -1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANP 639
L+ D+A A FL SD+++Y+SGHNL VDGG ++ NP
Sbjct: 246 LKAEDIAEAALFLGSDESKYVSGHNLIVDGGFTIVNP 136
Score = 58.8 bits (122), Expect(3) = 7e-049
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = +1 / -1
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L N A ELGQHGIRVNCVSP V TPL
Sbjct: 495 RRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVELGQHGIRVNCVSPYVVLTPL 316
Query: 448 TMRYMGLEAEALEQ 489
+ L+ + + +
Sbjct: 315 VKDFFKLDDDEVNR 274
Score = 55.1 bits (114), Expect(3) = 9e-030
Identities = 29/71 (40%), Positives = 36/71 (50%)
Frame = -3 / +2
Query: 479 ASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAYAYDDTPVTAAA 300
+S+S +GV T G+TQFTRMPC P+S A F + F A D TP
Sbjct: 284 SSSSSLKKSFTNGVKTT*GDTQFTRMPCCPNSTAVFLINPITPCFELV*ACDATPPIVPQ 463
Query: 299 TLDVPMMQPPR 267
TL V +M P R
Sbjct: 464 TLAVEIMLPRR 496
Score = 32.2 bits (64), Expect(3) = 9e-030
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / +2
Query: 620 PPSTNRLWPLMYLASSLARK 561
PPST +L PL YL SSL RK
Sbjct: 155 PPSTIKLCPLTYLDSSLPRK 214
>gb|CV266675.1|CV266675 WS0203.B21_K19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0203_K19 3', mRNA sequence
Length = 876
Score = 116 bits (249), Expect(3) = 4e-047
Identities = 47/93 (50%), Positives = 60/93 (64%)
Frame = +1 / -1
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L AS++HCDVT E +G LDIMFNNAG G ++ E+ KA
Sbjct: 735 VCKELEPEPASFIHCDVTQEKDVENAVNTAVSKYGKLDIMFNNAGTGGTPKTNILENDKA 556
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+++ NLVG FLGTKHAARVM+P+RRG I
Sbjct: 555 EFEKIICANLVGAFLGTKHAARVMIPARRGSII 457
Score = 56.1 bits (116), Expect(3) = 4e-047
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1 / -1
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANP 639
L D+A A +L SD+++Y+SGHNL VDGG ++ NP
Sbjct: 225 LEAEDIAEAALYLGSDESKYVSGHNLVVDGGFTIVNP 115
Score = 54.2 bits (112), Expect(3) = 4e-047
Identities = 25/60 (41%), Positives = 29/60 (48%)
Frame = +1 / -1
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L N A ELGQ+GIRVNCVSP V TPL
Sbjct: 474 RRGSIITTASVCAIIGGGSSHAYTSSKHGVLGLMRNTAVELGQYGIRVNCVSPYAVPTPL 295
>gb|DT523606.1|DT523606 WS02040.B21_C12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02040_C12 3', mRNA sequence
Length = 794
Score = 116 bits (249), Expect(3) = 4e-047
Identities = 47/93 (50%), Positives = 60/93 (64%)
Frame = +1 / -3
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L AS++HCDVT E +G LDIMFNNAG G ++ E+ KA
Sbjct: 735 VCKELEPEPASFIHCDVTQEKDVENAVNTAVSKYGKLDIMFNNAGTGGTPKTNILENDKA 556
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+++ NLVG FLGTKHAARVM+P+RRG I
Sbjct: 555 EFEKIICANLVGAFLGTKHAARVMIPARRGSII 457
Score = 56.1 bits (116), Expect(3) = 4e-047
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1 / -3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANP 639
L D+A A +L SD+++Y+SGHNL VDGG ++ NP
Sbjct: 225 LEAEDIAEAALYLGSDESKYVSGHNLVVDGGFTIVNP 115
Score = 54.2 bits (112), Expect(3) = 4e-047
Identities = 25/60 (41%), Positives = 29/60 (48%)
Frame = +1 / -3
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L N A ELGQ+GIRVNCVSP V TPL
Sbjct: 474 RRGSIITTASVCAIIGGGSSHAYTSSKHGVLGLMRNTAVELGQYGIRVNCVSPYAVPTPL 295
>gb|CV254153.1|CV254153 WS0224.B21_D03 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0224_D03 3', mRNA sequence
Length = 751
Score = 86.8 bits (183), Expect(3) = 4e-047
Identities = 38/85 (44%), Positives = 47/85 (55%)
Frame = +1 / -2
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II C+K A++ LT+NAA ELGQ GIRVNC+SP +ATPL
Sbjct: 600 RNGTIISTASVSSKVGAAASHAYCCSKHAVLGLTKNAAVELGQFGIRVNCLSPYALATPL 421
Query: 448 TMRYMGLEAEALEQAMEGMANLKGV 522
+ +GL+ E LE M LKGV
Sbjct: 420 AKQVIGLDDEQLENLMHAFGTLKGV 346
Score = 75.3 bits (158), Expect(3) = 4e-047
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +1 / -2
Query: 115 DIMFNNAGVSGPACYSVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
DIMFNNAG++ + + ++ K DFERVL N+ G FLG KHAARVM+P R G I
Sbjct: 750 DIMFNNAGIADESKARIIDNEKVDFERVLQTNVTGVFLGIKHAARVMIPGRNGTII 583
Score = 65.2 bits (136), Expect(3) = 4e-047
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1 / -2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L+ DVA A +LASD+ARY+SGHNLF+DGG ++ NPS
Sbjct: 342 LQAEDVANAALYLASDEARYVSGHNLFIDGGFTIQNPS 229
Score = 57.9 bits (120), Expect(3) = 3e-022
Identities = 33/82 (40%), Positives = 41/82 (50%)
Frame = -3 / +2
Query: 512 RLAMPSIACSNASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAY 333
R+ I S+ S+SRP+ GVA+ G+ QFT MP PSS AAF V A Y
Sbjct: 356 RVPKACIKFSSCSSSRPITCFAKGVASA*GDKQFTLMPNCPSSTAAFLVSPRTACLEQQY 535
Query: 332 AYDDTPVTAAATLDVPMMQPPR 267
A + T TL V +M P R
Sbjct: 536 ACEAAAPTFELTLAVEIMVPLR 601
Score = 45.1 bits (92), Expect(3) = 3e-022
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -3 / +2
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLS 168
P R G +TRAACL+PR P TRSKS LS
Sbjct: 593 PLRPGIMTRAACLMPRKTPVTLVCRTRSKSTFSLS 697
Score = 40.0 bits (81), Expect(3) = 3e-022
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / +2
Query: 641 DGFATEIPPSTNRLWPLMYLASSLAR 564
DGF PPS N+L PL YLASSLAR
Sbjct: 230 DGF*MVKPPSMNKLCPLTYLASSLAR 307
>gb|CV272143.1|CV272143 WS0156.B21.1_M15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra
cDNA clone WS0156_M15 3', mRNA sequence
Length = 683
Score = 107 bits (228), Expect(3) = 1e-046
Identities = 44/82 (53%), Positives = 55/82 (67%)
Frame = +1 / -3
Query: 37 YVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVNLV 216
+VHCDVT E G LDIMFNNAGV ++ ++GKA+FE+V+ VN+V
Sbjct: 681 FVHCDVTQETDVENAVNTAVSKHGKLDIMFNNAGVVDSPKPNILDNGKAEFEKVITVNIV 502
Query: 217 GPFLGTKHAARVMVPSRRGGCI 282
G FLGTKHAARVM+P+RRG I
Sbjct: 501 GTFLGTKHAARVMIPARRGSII 436
Score = 83.1 bits (175), Expect(3) = 4e-031
Identities = 41/78 (52%), Positives = 43/78 (55%)
Frame = -3 / +2
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL*HAGPLTPALLNMMSSAPNVXX 93
PRR G ITRAACLVP+N PT FT T S SALPLS TPALLNMMSS P +
Sbjct: 446 PRRAGIITRAACLVPKNVPTIFTVMTFSNSALPLSSMFGFGESTTPALLNMMSSFPCLET 625
Query: 92 XXXXXXXXXXXXXXSQWT 39
SQWT
Sbjct: 626 AVLTAFSTSVS*VTSQWT 679
Score = 59.7 bits (124), Expect(3) = 1e-046
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +1 / -3
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L N A ELGQHGIRVNCVSP V TP+
Sbjct: 453 RRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVELGQHGIRVNCVSPYAVLTPM 274
Query: 448 TMRYMGLE 471
++ L+
Sbjct: 273 MKSFLKLD 250
Score = 58.8 bits (122), Expect(3) = 1e-046
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANP 639
L+ D+A A FL SD+++Y+SGHNL VDGG ++ NP
Sbjct: 204 LKAEDIAEAALFLGSDESKYVSGHNLIVDGGFTIVNP 94
Score = 57.9 bits (120), Expect(3) = 4e-031
Identities = 30/71 (42%), Positives = 37/71 (52%)
Frame = -3 / +2
Query: 479 ASASRPMYLMVSGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAYAYDDTPVTAAA 300
+S+S L + GV T G+TQFTRMPC P+S A F + F A D TP
Sbjct: 242 SSSSSLRKLFIIGVKTA*GDTQFTRMPCCPNSTAVFLINPITPCFELV*ACDATPPIVPQ 421
Query: 299 TLDVPMMQPPR 267
TL V +M P R
Sbjct: 422 TLAVDIMLPRR 454
Score = 32.2 bits (64), Expect(3) = 4e-031
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / +2
Query: 620 PPSTNRLWPLMYLASSLARK 561
PPST +L PL YL SSL RK
Sbjct: 113 PPSTIKLCPLTYLDSSLPRK 172
>gb|CK095589.1|CK095589 UA15CPD06.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA15CPD06 3', mRNA sequence
Length = 824
Score = 101 bits (216), Expect(3) = 2e-044
Identities = 40/88 (45%), Positives = 52/88 (59%)
Frame = +1 / -2
Query: 19 GAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERV 198
G Y+HCDVT E FG LDIM NNAG+ GP C +R++ +DFE+V
Sbjct: 796 GEPKTCYIHCDVTIEDDVRQAVDFTVDKFGTLDIMVNNAGLGGPPCPDIRKAALSDFEKV 617
Query: 199 LAVNLVGPFLGTKHAARVMVPSRRGGCI 282
VN+ G FLG KHAAR+M+P +G +
Sbjct: 616 FDVNVKGVFLGMKHAARIMIPLNKGSIV 533
Score = 65.7 bits (137), Expect(3) = 4e-027
Identities = 33/87 (37%), Positives = 42/87 (48%)
Frame = -3 / +3
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL*HAGPLTPALLNMMSSAPNVXX 93
P G I RAAC +PRN P FT++T SKS R GP +PALL ++S+ PN+
Sbjct: 543 PLFRGIIIRAACFIPRNTPFTFTSNTFSKSDKAALRISGQGGPPSPALLTIISNVPNLST 722
Query: 92 XXXXXXXXXXXXXXSQWT*LAAPAPRS 12
SQW * +P S
Sbjct: 723 VKSTAWRTSSSIVTSQWI*QVFGSPPS 803
Score = 60.2 bits (125), Expect(3) = 2e-044
Identities = 24/40 (60%), Positives = 32/40 (80%)
Frame = +1 / -2
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTMRYM 462
+K A++ LT + AAELG+HGIRVNCVSP GVAT L + ++
Sbjct: 475 SKHAVLGLTRSVAAELGKHGIRVNCVSPYGVATSLAVAHL 356
Score = 59.3 bits (123), Expect(3) = 4e-027
Identities = 29/56 (51%), Positives = 34/56 (60%)
Frame = -3 / +3
Query: 440 VATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAYAYDDTPVTAAATLDVPMMQP 273
VATP GETQFTR+PC+PSSAA VR A F A +P A ATL ++P
Sbjct: 378 VATP*GETQFTRIPCFPSSAATLLVRPNTACFDPV*ACGPSPPMALATLQRETIEP 545
Score = 56.1 bits (116), Expect(3) = 2e-044
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +1 / -2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L V DVA AV FLASD+ARYISG NL +DGG + N S
Sbjct: 274 LTVDDVANAVLFLASDEARYISGDNLMLDGGFTCTNHS 161
Score = 39.1 bits (79), Expect(3) = 4e-027
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3 / +3
Query: 620 PPSTNRLWPLMYLASSLARK 561
PPS+ RL PLMYLASSLARK
Sbjct: 183 PPSSIRLSPLMYLASSLARK 242
>gb|DT519739.1|DT519739 WS02443.B21_I12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02443_I12 3', mRNA sequence
Length = 842
Score = 151 bits (324), Expect(2) = 1e-042
Identities = 64/153 (41%), Positives = 92/153 (60%)
Frame = +1 / -2
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVT 363
+F+RVL +NL G FLGTKHAARVM+P+++G + +K A+V
Sbjct: 697 EFKRVLDINLFGAFLGTKHAARVMIPAKKGCILFTGSVITATCTGATPHPYFASKHAVVG 518
Query: 364 LTENAAAELGQHGIRVNCVSPAGVATPLTMRYMGLEAEALEQAMEGMANLKGVGALRVHD 543
L +N A ELG HGIRVNC+SP ATP+ MG+E +E+ + + + L D
Sbjct: 517 LAKNLAVELGGHGIRVNCISPFTTATPMVTESMGIEKRKMEEFISSSSAILKEVLLEPED 338
Query: 544 VAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
+A A +LASD+++Y+SG NL +DGG S+ NP+
Sbjct: 337 IANAAVYLASDESKYVSGINLVIDGGYSLINPT 239
Score = 42.3 bits (86), Expect(2) = 1e-042
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1 / -2
Query: 43 HCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSG 147
HCDVT + +G LDIMFNNAGV G
Sbjct: 841 HCDVTCDSDVKNAVDMAVFKYGKLDIMFNNAGVIG 737
>gb|DN488225.1|DN488225 R042E08.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R042E08 3', mRNA sequence
Length = 882
Score = 82.6 bits (174), Expect(3) = 1e-040
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +1 / -2
Query: 103 FGALDIMFNNAGVSGPACYSVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
+G LDIMFNNAG+SG S+ S DF RVL +N+ G FLG KHAARVM+P+++G
Sbjct: 815 YGKLDIMFNNAGISGNTKSSILNSDNEDFMRVLNINVYGGFLGAKHAARVMIPAKKG 645
Score = 68.9 bits (144), Expect(3) = 1e-040
Identities = 30/81 (37%), Positives = 42/81 (51%)
Frame = +1 / -2
Query: 274 GCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
GCI+ +K A+V L +N + +LGQHGIRVN +SP VATP+
Sbjct: 647 GCILFTASVASVLYGELAHAYTASKNAIVGLAKNLSVDLGQHGIRVNSISPTAVATPMLT 468
Query: 454 RYMGLEAEALEQAMEGMANLK 516
+ + EA E+ + ANLK
Sbjct: 467 DALRMTKEAAEKFVASAANLK 405
Score = 54.2 bits (112), Expect(3) = 1e-040
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +1 / -2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
L DVA A +LASDD++Y+SG NL +DGG ++ NPS
Sbjct: 395 LEPEDVAQAALYLASDDSKYVSGVNLVIDGGYNLTNPS 282
>gb|BU837391.1|BU837391 T101C08 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 589
Score = 67.5 bits (141), Expect(3) = 7e-035
Identities = 25/41 (60%), Positives = 36/41 (87%)
Frame = +1 / +3
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
++ ++ KA+FE+V++VN+VG FLGTKHAARVM+P+RRG I
Sbjct: 30 NILDNDKAEFEKVMSVNVVGAFLGTKHAARVMIPARRGSII 152
Score = 59.7 bits (124), Expect(3) = 7e-035
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = +1 / +3
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L N A ELGQHGIRVNCVSP V TPL
Sbjct: 135 RRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVELGQHGIRVNCVSPYVVLTPL 314
Query: 448 TMRYMGLEAEALEQ 489
+ L+ + + +
Sbjct: 315 VKDFFKLDGDEVNR 356
Score = 58.8 bits (122), Expect(3) = 7e-035
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANP 639
L+ D+A A FL SD+++Y+SGHNL VDGG ++ NP
Sbjct: 384 LKAEDIAEAALFLGSDESKYVSGHNLIVDGGFTIVNP 494
Score = 54.7 bits (113), Expect(3) = 3e-022
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = -3 / -1
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL 159
PRR G +TRAACLVP+N PT T T S SAL LS L
Sbjct: 142 PRRAGIMTRAACLVPKNAPTTLTLMTFSNSALSLSSML 29
Score = 54.7 bits (113), Expect(3) = 3e-022
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = -3 / -1
Query: 446 SGVATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAYAYDDTPVTAAATLDVPMMQPPR 267
+GV T G+TQFTRMPC P+S A F + F A D TP TL V +M P R
Sbjct: 313 NGVKTT*GDTQFTRMPCCPNSTAVFLINPITPCFELV*ACDATPPIVPQTLAVEIMLPRR 134
Score = 33.6 bits (67), Expect(3) = 3e-022
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -3 / -1
Query: 620 PPSTNRLWPLMYLASSLARK 561
PPST RL PL YL SSL RK
Sbjct: 475 PPSTIRLCPLTYLDSSLPRK 416
>gb|CN519417.1|CN519417 GQ0102.B3_D01 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0102_D01 5', mRNA sequence
Length = 677
Score = 79.4 bits (167), Expect(3) = 2e-034
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +1 / -3
Query: 274 GCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
GCI+ K +V L +N AAELGQ+GIRVNCVSP GVATP+
Sbjct: 522 GCILFTASACTAIGGLATPAYAVTKHGIVGLAKNLAAELGQYGIRVNCVSPYGVATPMYE 343
Query: 454 RYMGLEAEALEQAMEGMANLKG 519
+ A +E+++E M NLKG
Sbjct: 342 GFSADTAPMIEESLEQMGNLKG 277
Score = 54.2 bits (112), Expect(3) = 2e-034
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 532 RVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
+V D+A A +LASD+A ++SG NL VDGG SV NP+
Sbjct: 267 KVEDMAMAALYLASDEANFVSGMNLVVDGGFSVVNPT 157
Score = 50.6 bits (104), Expect(3) = 2e-034
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +1 / -3
Query: 118 IMFNNAGVSGPACYSVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
IM NA + G S+ ++ K+D V LVG FLG KHAAR+MV +G
Sbjct: 675 IMXXNAXILGRXXXSILDAPKSDXXXXXXVXLVGCFLGAKHAARIMVTQXQG 520
>gb|DN496279.1|DN496279 P053C09.5pR Populus petioles cDNA library Populus tremula cDNA
clone P053C09 5', mRNA sequence
Length = 753
Score = 67.5 bits (141), Expect(3) = 1e-033
Identities = 25/41 (60%), Positives = 36/41 (87%)
Frame = +1 / +2
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
++ ++ KA+FE+V++VN+VG FLGTKHAARVM+P+RRG I
Sbjct: 362 NILDNDKAEFEKVMSVNVVGAFLGTKHAARVMIPARRGSII 484
Score = 58.8 bits (122), Expect(3) = 1e-033
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = +1 / +2
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L N A ELGQHGIRVNCVSP V TPL
Sbjct: 467 RRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVELGQHGIRVNCVSPYVVLTPL 646
Query: 448 TMRYMGLEAEALEQ 489
+ L+ + + +
Sbjct: 647 VKDFFKLDDDEVNR 688
Score = 55.1 bits (114), Expect(3) = 1e-033
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +1 / +2
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGV 141
VC +L +AS+VHCDVT E G LDIMFNNAGV
Sbjct: 203 VCEELKTESASFVHCDVTQETDVENAVNTAVSKHGKLDIMFNNAGV 340
>gb|BU891645.1|BU891645 P053C09 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 699
Score = 67.5 bits (141), Expect(3) = 1e-033
Identities = 25/41 (60%), Positives = 36/41 (87%)
Frame = +1 / +2
Query: 160 SVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
++ ++ KA+FE+V++VN+VG FLGTKHAARVM+P+RRG I
Sbjct: 362 NILDNDKAEFEKVMSVNVVGAFLGTKHAARVMIPARRGSII 484
Score = 58.8 bits (122), Expect(3) = 1e-033
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = +1 / +2
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L N A ELGQHGIRVNCVSP V TPL
Sbjct: 467 RRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVELGQHGIRVNCVSPYVVLTPL 646
Query: 448 TMRYMGLEAEALEQ 489
+ L+ + + +
Sbjct: 647 VKDFFKLDDDEVNR 688
Score = 55.1 bits (114), Expect(3) = 1e-033
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +1 / +2
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGV 141
VC +L +AS+VHCDVT E G LDIMFNNAGV
Sbjct: 203 VCEELKTESASFVHCDVTQETDVENAVNTAVSKHGKLDIMFNNAGV 340
>gb|CV271278.1|CV271278 WS0154.B21_E07 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_E07 3', mRNA sequence
Length = 860
Score = 76.7 bits (161), Expect(3) = 2e-033
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +1 / -1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A+++ CDVT E + LDI++NNAGV+ + +S+ + A F+R++ +N
Sbjct: 719 ATFISCDVTKESDVSGAVDFAISKYNQLDILYNNAGVACKSPHSIVDLDLAVFDRIMNIN 540
Query: 211 LVGPFLGTKHAARVMVPSRRGGCI 282
+ G G KHA+RVM+P R G +
Sbjct: 539 VRGVMAGVKHASRVMIPRRSGAIL 468
Score = 52.4 bits (108), Expect(3) = 2e-033
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1 / -1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
RR G I+ +K A+ + ++ AAEL +HGIR+NC+SP + TP
Sbjct: 488 RRSGAILCTASITGLMGGLAQHTYSVSKFAVAGIVKSLAAELCKHGIRINCISPFAIPTP 309
Query: 445 LTMRYM 462
M M
Sbjct: 308 FVMEEM 291
Score = 51.9 bits (107), Expect(3) = 2e-033
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +1 / -1
Query: 538 HDVAAAVRFLASDDARYISGHNLFVDGGIS 627
+D+A A +LASDDA+Y+SGHNL VDGG +
Sbjct: 203 NDIANAALYLASDDAKYVSGHNLVVDGGFT 114
>gb|CV250989.1|CV250989 WS0115.B21_H22 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0115_H22 3', mRNA sequence
Length = 739
Score = 76.7 bits (161), Expect(3) = 2e-033
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +1 / -1
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A+++ CDVT E + LDI++NNAGV+ + +S+ + A F+R++ +N
Sbjct: 712 ATFISCDVTKESDVSGAVDFAISKYNQLDILYNNAGVACKSPHSIVDLDLAVFDRIMNIN 533
Query: 211 LVGPFLGTKHAARVMVPSRRGGCI 282
+ G G KHA+RVM+P R G +
Sbjct: 532 VRGVMAGVKHASRVMIPRRSGAIL 461
Score = 52.4 bits (108), Expect(3) = 2e-033
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1 / -1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
RR G I+ +K A+ + ++ AAEL +HGIR+NC+SP + TP
Sbjct: 481 RRSGAILCTASITGLMGGLAQHTYSVSKFAVAGIVKSLAAELCKHGIRINCISPFAIPTP 302
Query: 445 LTMRYM 462
M M
Sbjct: 301 FVMEEM 284
Score = 51.9 bits (107), Expect(3) = 2e-033
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +1 / -1
Query: 538 HDVAAAVRFLASDDARYISGHNLFVDGGIS 627
+D+A A +LASDDA+Y+SGHNL VDGG +
Sbjct: 196 NDIANAALYLASDDAKYVSGHNLVVDGGFT 107
>gb|DT525784.1|DT525784 WS02046.C21_E14 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02046_E14 3', mRNA sequence
Length = 918
Score = 61.6 bits (128), Expect(4) = 2e-032
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = +1 / -2
Query: 274 GCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
GCII +K A+V LT+N A ELG++GIRVNC+SP GVAT +
Sbjct: 560 GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSM 387
Score = 56.5 bits (117), Expect(4) = 2e-032
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1 / -2
Query: 529 LRVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPSTG 648
LR D+A A +LASD+++Y+SGHNL VDGGI+ + G
Sbjct: 260 LRARDIAEAALYLASDESKYVSGHNLVVDGGITTSRNCVG 141
Score = 41.4 bits (84), Expect(4) = 2e-032
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1 / -2
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVP 261
+F+RV+ VN+ G LG KHAARVM+P
Sbjct: 647 EFDRVMQVNVRGVALGIKHAARVMIP 570
Score = 41.4 bits (84), Expect(4) = 2e-032
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1 / -2
Query: 22 AGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSG 147
A + S HCDV+ E +G LD++FNNAGV G
Sbjct: 815 APSVSLFHCDVSLEEDIENLINSTVSHYGKLDVLFNNAGVLG 690
>gb|DN499762.1|DN499762 T084E12.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T084E12 5', mRNA sequence
Length = 861
Score = 56.1 bits (116), Expect(4) = 4e-032
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +1 / +1
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTMRYMG 465
+K A+V LT++ +ELGQ GIRVNC+SPA V TPL G
Sbjct: 523 SKHAIVGLTKSLCSELGQFGIRVNCISPAAVPTPLMRNAFG 645
Score = 47.3 bits (97), Expect(4) = 4e-032
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1 / +1
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+F+RV N+ G FLG KHA+RVM+P ++G I
Sbjct: 367 NFKRVFDTNVYGAFLGAKHASRVMIPEKKGSII 465
Score = 46.9 bits (96), Expect(4) = 4e-032
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1 / +1
Query: 34 SYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSG 147
SYVHCDVT E +G LDI F+NAGV G
Sbjct: 217 SYVHCDVTRESDVEKAVNTAVSKYGKLDIFFSNAGVLG 330
Score = 43.7 bits (89), Expect(4) = 4e-032
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 553 AVRFLASDDARYISGHNLFVDGGISVAN 636
A +LASDD++Y+SG NL VDGGI+ N
Sbjct: 732 AALYLASDDSKYVSGLNLVVDGGITSTN 815
>gb|CN519800.1|CN519800 GQ0106.B3_E11 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0106_E11 5', mRNA sequence
Length = 757
Score = 100 bits (213), Expect(2) = 5e-032
Identities = 40/88 (45%), Positives = 51/88 (57%)
Frame = +1 / +1
Query: 19 GAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERV 198
G Y+HCDVT E FG LDIM NNAG+ GP C +R+ +DFE+V
Sbjct: 268 GEPKTCYIHCDVTIEDDVRQAVDFTVDKFGTLDIMVNNAGLGGPPCPDIRKVALSDFEKV 447
Query: 199 LAVNLVGPFLGTKHAARVMVPSRRGGCI 282
VN+ G FLG KHAAR+M+P +G +
Sbjct: 448 FDVNVKGVFLGMKHAARIMIPLNKGSIV 531
Score = 62.9 bits (131), Expect(2) = 5e-021
Identities = 32/87 (36%), Positives = 41/87 (47%)
Frame = -3 / -3
Query: 272 PRREGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL*HAGPLTPALLNMMSSAPNVXX 93
P G I RAAC +PR P FT++T SKS R GP +PALL ++S+ PN+
Sbjct: 521 PLFRGIIIRAACFIPRKTPFTFTSNTFSKSDKATLRISGQGGPPSPALLTIISNVPNLST 342
Query: 92 XXXXXXXXXXXXXXSQWT*LAAPAPRS 12
SQW * +P S
Sbjct: 341 VKSTAWRTSSSIVTSQWI*QVFGSPPS 261
Score = 58.3 bits (121), Expect(2) = 5e-021
Identities = 29/56 (51%), Positives = 33/56 (58%)
Frame = -3 / -3
Query: 440 VATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAYAYDDTPVTAAATLDVPMMQP 273
VATP GETQFTR+PC+PSSAA VR A F A P A ATL ++P
Sbjct: 686 VATP*GETQFTRIPCFPSSAATLLVRPNTACFDPV*ACGPIPPMALATLQRETIEP 519
Score = 57.9 bits (120), Expect(2) = 5e-032
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTMRYM 462
+K A++ LT + AAELG+HGIRVNCVSP GVAT + ++
Sbjct: 589 SKHAVLGLTRSVAAELGKHGIRVNCVSPYGVATSXXVAHL 708
>gb|BU868463.1|BU868463 M116B09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 705
Score = 137 bits (294), Expect = 1e-031
Identities = 67/192 (34%), Positives = 92/192 (47%)
Frame = +1 / +2
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGK 180
+V +G SY+HCDVT E FG LDIMF+NAG+ G + ++
Sbjct: 32 QVATSIGQQKCSYMHCDVTDEEQVKSLVEWTVKNFGRLDIMFSNAGILGSSDQTILNLDL 211
Query: 181 ADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMV 360
+ F+R+ A+N G KHAARVMV R G I+ +K A++
Sbjct: 212 SGFDRLFAINARGMATCVKHAARVMVEQRLRGSIVCTASVAASNGGRRRTDYHMSKHAVL 391
Query: 361 TLTENAAAELGQHGIRVNCVSPAGVATPLTMRYMGLEAEALEQAMEGMANLKGVGALRVH 540
L +A+ +LG HGIRVNCVSP G+ TP+T+ E LE E +LKG H
Sbjct: 392 GLVRSASMQLGVHGIRVNCVSPYGLVTPMTLHAHRKGVEELENMYETNMSLKGAALTAKH 571
Query: 541 DVAAAVRFLASD 576
A + +D
Sbjct: 572 VADAVLFLACND 607
>gb|DN485187.1|DN485187 M116B09.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M116B09 3', mRNA sequence
Length = 688
Score = 137 bits (294), Expect = 1e-031
Identities = 67/192 (34%), Positives = 92/192 (47%)
Frame = +1 / -2
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGK 180
+V +G SY+HCDVT E FG LDIMF+NAG+ G + ++
Sbjct: 648 QVATSIGQQKCSYMHCDVTDEEQVKSLVEWTVKNFGRLDIMFSNAGILGSSDQTILNLDL 469
Query: 181 ADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMV 360
+ F+R+ A+N G KHAARVMV R G I+ +K A++
Sbjct: 468 SGFDRLFAINARGMATCVKHAARVMVEQRLRGSIVCTASVAASNGGRRRTDYHMSKHAVL 289
Query: 361 TLTENAAAELGQHGIRVNCVSPAGVATPLTMRYMGLEAEALEQAMEGMANLKGVGALRVH 540
L +A+ +LG HGIRVNCVSP G+ TP+T+ E LE E +LKG H
Sbjct: 288 GLVRSASMQLGVHGIRVNCVSPYGLVTPMTLHAHRKGVEELENMYETNMSLKGAALTAKH 109
Query: 541 DVAAAVRFLASD 576
A + +D
Sbjct: 108 VADAVLFLACND 73
>gb|DN494650.1|DN494650 M116B09.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M116B09 5', mRNA sequence
Length = 724
Score = 137 bits (294), Expect = 1e-031
Identities = 67/192 (34%), Positives = 92/192 (47%)
Frame = +1 / +2
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGK 180
+V +G SY+HCDVT E FG LDIMF+NAG+ G + ++
Sbjct: 41 QVATSIGQQKCSYMHCDVTDEEQVKSLVEWTVKNFGRLDIMFSNAGILGSSDQTILNLDL 220
Query: 181 ADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMV 360
+ F+R+ A+N G KHAARVMV R G I+ +K A++
Sbjct: 221 SGFDRLFAINARGMATCVKHAARVMVEQRLRGSIVCTASVAASNGGRRRTDYHMSKHAVL 400
Query: 361 TLTENAAAELGQHGIRVNCVSPAGVATPLTMRYMGLEAEALEQAMEGMANLKGVGALRVH 540
L +A+ +LG HGIRVNCVSP G+ TP+T+ E LE E +LKG H
Sbjct: 401 GLVRSASMQLGVHGIRVNCVSPYGLVTPMTLHAHRKGVEELENMYETNMSLKGAALTAKH 580
Query: 541 DVAAAVRFLASD 576
A + +D
Sbjct: 581 VADAVLFLACND 616
>gb|DV465077.1|DV465077 MTUNUL1.P34.F12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 900
Score = 137 bits (293), Expect = 1e-031
Identities = 68/192 (35%), Positives = 92/192 (47%)
Frame = +1 / +2
Query: 1 RVCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGK 180
+V +G SY+HCDVT E FG LDIMF+NAG+ G + ++
Sbjct: 245 QVATLIGQQKCSYMHCDVTDEEQVKSLVEWTVKNFGRLDIMFSNAGILGSSDQTILNLDL 424
Query: 181 ADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMV 360
+ F+R+ A+N G KHAARVMV R G I+ +K A++
Sbjct: 425 SGFDRLFAINARGMATCVKHAARVMVEQRLRGSIVCTASVAASNGGRRRTDYHMSKHAVL 604
Query: 361 TLTENAAAELGQHGIRVNCVSPAGVATPLTMRYMGLEAEALEQAMEGMANLKGVGALRVH 540
L +A+ +LG HGIRVNCVSP GV TP+T+ E LE E +LKG H
Sbjct: 605 GLVRSASMQLGVHGIRVNCVSPYGVVTPMTLHAHRKGVEELENMYETNMSLKGAALTAKH 784
Query: 541 DVAAAVRFLASD 576
A + +D
Sbjct: 785 VADAVLFLACND 820
>gb|DN500307.1|DN500307 UK117TA09.5pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone UK117TA09 5', mRNA
sequence
Length = 807
Score = 89.5 bits (189), Expect(2) = 2e-031
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +1 / +2
Query: 37 YVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVNLV 216
Y+HCDV++E +G LDIM+NNAG+ + S+ ++ K+D +R++ VNLV
Sbjct: 278 YIHCDVSNEDEVSDLVDATVKKYGKLDIMYNNAGIVDRSSGSILDTPKSDLDRLIGVNLV 457
Query: 217 GPFLGTKHAARVMVPSRRG 273
G FLG KHAARVMV +G
Sbjct: 458 GCFLGAKHAARVMVTQGQG 514
Score = 67.0 bits (140), Expect(2) = 2e-031
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +1 / +2
Query: 274 GCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
GCI+ K +V L +N AAELGQ+GIRVNCVSP GVATP++
Sbjct: 512 GCILFTASACTAIGGLSTPAYAVTKHGIVGLAKNLAAELGQYGIRVNCVSPFGVATPMSE 691
Query: 454 RY 459
R+
Sbjct: 692 RF 697
>gb|CV131227.1|CV131227 L1P09h07 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 753
Score = 103 bits (219), Expect(2) = 2e-031
Identities = 43/93 (46%), Positives = 57/93 (61%)
Frame = +1 / +3
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC DL + +AS++HCDVT E G D+ FNNAG+ G ++ + +
Sbjct: 285 VCKDLNSESASFIHCDVTKETDVENAVNTAISRHGKPDVTFNNAGIVGVVKTNMVDVSMS 464
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE V+ VNLVG FLGTKHAARVM P+R+G I
Sbjct: 465 EFEEVIRVNLVGAFLGTKHAARVMKPARQGSII 563
Score = 68.9 bits (144), Expect(2) = 1e-021
Identities = 38/94 (40%), Positives = 43/94 (45%)
Frame = -3 / -3
Query: 284 MMQPPRREGTITRAACLVPRNGPTRFTASTRSKSALPLSRTL*HAGPLTPALLNMMSSAP 105
+M P R G ITRAACLVPR PTR T T S S + S L P PALLN+ S P
Sbjct: 565 VMMLPCRAGFITRAACLVPRKAPTRLTLMTSSNSDMETSTMLVFTTPTIPALLNVTSGLP 386
Query: 104 NVXXXXXXXXXXXXXXXXSQWT*LAAPAPRSAQT 3
+ SQW A +S QT
Sbjct: 385 CLEMAVFTAFSTSVSFVTSQWIKEADSEFKSLQT 284
Score = 54.7 bits (113), Expect(2) = 1e-021
Identities = 29/58 (50%), Positives = 32/58 (55%)
Frame = -3 / -3
Query: 440 VATPAGETQFTRMPCWPSSAAAFSVRVTIARFAHAYAYDDTPVTAAATLDVPMMQPPR 267
VAT GETQFTRMP PSS AAF + F A+D P TL+V MM P R
Sbjct: 718 VATVYGETQFTRMPNCPSSTAAFLISPNTPCFELV*AWDAKPPRIPQTLEVVMMLPCR 545
Score = 53.3 bits (110), Expect(2) = 2e-031
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = +1 / +3
Query: 268 RGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPL 447
R G II +K ++ L NAA ELGQ GIRVNCVSP VAT +
Sbjct: 546 RQGSIITTSSVCGILGGFASHAYTSSKHGVLGLMRNAAVELGQFGIRVNCVSPYTVATEM 725
Query: 448 TMRYM 462
+ ++
Sbjct: 726 SRNFL 740
>gb|CA926763.1|CA926763 MTU6CR.P18.H05 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 476
Score = 79.4 bits (167), Expect(3) = 5e-031
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +1 / -1
Query: 106 GALDIMFNNAGVSGPACYSVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
G LDIMFNNAG+SG S+ S DF RV ++N+ G FLG KHAARVM+P+++G
Sbjct: 476 GKLDIMFNNAGISGNTKSSILNSDNEDFMRVHSINVYGGFLGAKHAARVMIPAKKG 309
Score = 68.9 bits (144), Expect(3) = 5e-031
Identities = 30/81 (37%), Positives = 42/81 (51%)
Frame = +1 / -1
Query: 274 GCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
GCI+ +K A+V L +N + +LGQHGIRVN +SP VATP+
Sbjct: 311 GCILFTASVASVLYGELAHAYTASKNAIVGLAKNLSVDLGQHGIRVNSISPTAVATPMLT 132
Query: 454 RYMGLEAEALEQAMEGMANLK 516
+ + EA E+ + ANLK
Sbjct: 131 DALRMTKEAAEKFVASAANLK 69
Score = 24.4 bits (47), Expect(3) = 5e-031
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1 / -1
Query: 529 LRVHDVAAAVRFLASDDAR 585
L DVA A +LASDD++
Sbjct: 59 LEPEDVAQAALYLASDDSK 3
>gb|BU817310.1|BU817310 UA15CPD06 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 437
Score = 101 bits (216), Expect(2) = 2e-030
Identities = 40/88 (45%), Positives = 52/88 (59%)
Frame = +1 / +2
Query: 19 GAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERV 198
G Y+HCDVT E FG LDIM NNAG+ GP C +R++ +DFE+V
Sbjct: 26 GEPKTCYIHCDVTIEDDVRQAVDFTVDKFGTLDIMVNNAGLGGPPCPDIRKAALSDFEKV 205
Query: 199 LAVNLVGPFLGTKHAARVMVPSRRGGCI 282
VN+ G FLG KHAAR+M+P +G +
Sbjct: 206 FDVNVKGVFLGMKHAARIMIPLNKGSIV 289
Score = 51.0 bits (105), Expect(2) = 2e-030
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +1 / +2
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAG 432
+K A++ LT + AAELG+HGIRVNCVSP G
Sbjct: 347 SKHAVLGLTRSVAAELGKHGIRVNCVSPYG 436
>gb|DT511857.1|DT511857 WS02417.B21_K09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K09 3', mRNA sequence
Length = 749
Score = 61.1 bits (127), Expect(3) = 8e-029
Identities = 23/60 (38%), Positives = 40/60 (66%)
Frame = +1 / -1
Query: 103 FGALDIMFNNAGVSGPACYSVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+ LDI++NNAGV+ + +S+ + + F+R++ +N+ G G KHA+RVM+P R G +
Sbjct: 722 YNQLDILYNNAGVACKSPHSIVDLDLSVFDRIMNINVRGVMAGVKHASRVMIPRRSGAIL 543
Score = 52.4 bits (108), Expect(3) = 8e-029
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1 / -1
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
RR G I+ +K A+ + ++ AAEL +HGIR+NC+SP + TP
Sbjct: 563 RRSGAILCTASITGLMGGLAQHTYSVSKFAVAGIVKSLAAELCKHGIRINCISPFAIPTP 384
Query: 445 LTMRYM 462
M M
Sbjct: 383 FVMEEM 366
Score = 51.9 bits (107), Expect(3) = 8e-029
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +1 / -1
Query: 538 HDVAAAVRFLASDDARYISGHNLFVDGGIS 627
+D+A A +LASDDA+Y+SGHNL VDGG +
Sbjct: 278 NDIANAALYLASDDAKYVSGHNLVVDGGFT 189
>gb|CN549250.1|CN549250 GQ0243.B3_B20 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0243_B20 5', mRNA sequence
Length = 734
Score = 78.0 bits (164), Expect(3) = 3e-026
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +1 / +3
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A+++ CDVT E + LDIM+NNAGV+ + +S+ + A F+R++ +N
Sbjct: 156 ATFISCDVTKESDVSGAVDFAISKYNQLDIMYNNAGVACKSPHSIVDLDLAVFDRIMNIN 335
Query: 211 LVGPFLGTKHAARVMVPSRRGGCI 282
+ G G KHA+RVM+P R G +
Sbjct: 336 VRGVMAGVKHASRVMIPRRSGAIL 407
Score = 51.0 bits (105), Expect(3) = 3e-026
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1 / +3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
RR G I+ +K A+ + ++ AAEL +HGIR+NC+SP + TP
Sbjct: 387 RRSGAILCTASITGLMGGLAQHTYSVSKFAVAGIVKSLAAELCKHGIRINCISPFAIPTP 566
Query: 445 LTM 453
M
Sbjct: 567 FVM 575
Score = 27.6 bits (54), Expect(3) = 3e-026
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 538 HDVAAAVRFLASDDARYIS 594
+D A A +LASDDA Y+S
Sbjct: 672 NDXANAALYLASDDAXYVS 728
>gb|CN192959.1|CN192959 PtdH2038 hybrid poplar systemically wound-induced leaf cDNA library
Populus trichocarpa x Populus deltoides cDNA 5, mRNA
sequence
Length = 471
Score = 118 bits (253), Expect = 4e-026
Identities = 48/93 (51%), Positives = 64/93 (68%)
Frame = +1 / +3
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAG++G ++ ++ KA
Sbjct: 78 VCEELKTESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIAGSPKPNILDNDKA 257
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+V++VN+VG FLGTKHAARVM+P+RRG I
Sbjct: 258 EFEKVISVNIVGAFLGTKHAARVMIPARRGSII 356
>gb|AJ774985.1|AJ774985 AJ774985 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300026E07F1, mRNA sequence
Length = 548
Score = 117 bits (251), Expect = 8e-026
Identities = 49/93 (52%), Positives = 63/93 (67%)
Frame = +1 / +3
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAGV G ++ ++ KA
Sbjct: 174 VCEELKTESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGVVGSPKPNILDNDKA 353
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+V++VN+VG FLGTKHAARVM+P+RRG I
Sbjct: 354 EFEKVISVNIVGAFLGTKHAARVMIPARRGSII 452
>gb|CN518319.1|CN518319 GQ0094.B3_K04 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0094_K04 5', mRNA sequence
Length = 533
Score = 117 bits (250), Expect = 1e-025
Identities = 47/90 (52%), Positives = 63/90 (70%)
Frame = +1 / +1
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAG++G ++ ++ KA
Sbjct: 199 VCEELKTESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIAGSPKPNILDNDKA 378
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRG 273
+FE+V++VN+VG FLGTKHAARVM+P+RRG
Sbjct: 379 EFEKVISVNIVGAFLGTKHAARVMIPARRG 468
>gb|DN490337.1|DN490337 UK117TA09.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone UK117TA09 3', mRNA
sequence
Length = 632
Score = 79.9 bits (168), Expect(2) = 3e-025
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +1 / -1
Query: 274 GCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTM 453
GCI+ K +V L +N AAELGQ+GIRVNCVSP GVATP++
Sbjct: 608 GCILFTASACTAIGGLSTPAYAVTKHGIVGLAKNLAAELGQYGIRVNCVSPFGVATPMSE 429
Query: 454 RYMGLEAEALEQAMEGMANLKG 519
R+ A +E+ + M NLKG
Sbjct: 428 RFSADTAPMIEELLGQMGNLKG 363
Score = 55.6 bits (115), Expect(2) = 3e-025
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1 / -1
Query: 532 RVHDVAAAVRFLASDDARYISGHNLFVDGGISVANPS 642
+V D+A A +LASD+A Y+SG NL VDGG SV NP+
Sbjct: 353 KVEDMARAALYLASDEANYVSGLNLVVDGGFSVVNPT 243
>gb|CN518395.1|CN518395 GQ0091.B3_H24 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0091_H24 5', mRNA sequence
Length = 555
Score = 115 bits (246), Expect = 4e-025
Identities = 47/93 (50%), Positives = 63/93 (67%)
Frame = +1 / +1
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAG++G ++ ++ KA
Sbjct: 193 VCEELKTESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIAGSPKPNILDNDKA 372
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+V++VN+VG FLGTKHAARVM+P+RR I
Sbjct: 373 EFEKVISVNIVGAFLGTKHAARVMIPARRXSII 471
>gb|CX175895.1|CX175895 E11_69-104_09.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 588
Score = 85.8 bits (181), Expect(2) = 4e-025
Identities = 45/134 (33%), Positives = 65/134 (48%)
Frame = +1 / +1
Query: 121 MFNNAGVSGPACYSVRESGKADFERVLAVNLVGPFLGTKHAARVMVPSRRGGCIIXXXXX 300
+F NAG+ +V + ++++ +N+ G KHAAR MV G II
Sbjct: 10 VFCNAGIMSFGKQTVLDFDLDSYDKLFVINVRGVAACLKHAARAMVEGGIKGSIICTASV 189
Query: 301 XXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTMRYMGLEAEA 480
+K ++ L + A+ +L +HGIRVNCVSP VATPL + M + E
Sbjct: 190 IASLARGMHTDYIMSKSGVLALMKCASYQLSEHGIRVNCVSPGPVATPLACKKMNMGVEE 369
Query: 481 LEQAMEGMANLKGV 522
E+A E LKGV
Sbjct: 370 AEKAFEPHYCLKGV 411
Score = 49.2 bits (101), Expect(2) = 4e-025
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1 / +1
Query: 523 GALRVHDVAAAVRFLASDDARYISGHNLFVDGG 621
G L+ VA AV FLAS+D+ +++GHNL VDGG
Sbjct: 406 GVLKAKHVADAVLFLASEDSEFVTGHNLVVDGG 504
>gb|CA824431.1|CA824431 R41H11 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 596
Score = 113 bits (241), Expect = 2e-024
Identities = 47/93 (50%), Positives = 61/93 (65%)
Frame = +1 / +3
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAG+ G ++ ++ KA
Sbjct: 198 VCEELKTESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIVGTPKPNILDNDKA 377
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+V++VN+VG FLGTKH ARVM+P RRG I
Sbjct: 378 EFEKVISVNVVGAFLGTKHPARVMIPVRRGSII 476
>gb|CB833373.1|CB833373 R19E06 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 522
Score = 113 bits (241), Expect = 2e-024
Identities = 47/93 (50%), Positives = 61/93 (65%)
Frame = +1 / +1
Query: 4 VCADLGAGAASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKA 183
VC +L +AS+VHCDVT E G LDIMFNNAG+ G ++ ++ KA
Sbjct: 214 VCEELKTESASFVHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIVGTPKPNILDNDKA 393
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+FE+V++VN+VG FLGTKH ARVM+P RRG I
Sbjct: 394 EFEKVISVNVVGAFLGTKHPARVMIPVRRGSII 492
>gb|BU836266.1|BU836266 T084E12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 708
Score = 56.1 bits (116), Expect(3) = 2e-024
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +1 / +3
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTMRYMG 465
+K A+V LT++ +ELGQ GIRVNC+SPA V TPL G
Sbjct: 525 SKHAIVGLTKSLCSELGQFGIRVNCISPAAVPTPLMRNAFG 647
Score = 47.3 bits (97), Expect(3) = 2e-024
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+F+RV N+ G FLG KHA+RVM+P ++G I
Sbjct: 369 NFKRVFDTNVYGAFLGAKHASRVMIPEKKGSII 467
Score = 46.9 bits (96), Expect(3) = 2e-024
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1 / +3
Query: 34 SYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSG 147
SYVHCDVT E +G LDI F+NAGV G
Sbjct: 219 SYVHCDVTRESDVEKAVNTAVSKYGKLDIFFSNAGVLG 332
>gb|CV273040.1|CV273040 WS0171.B21_H16 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_H16 3', mRNA sequence
Length = 759
Score = 84.0 bits (177), Expect(2) = 5e-024
Identities = 41/111 (36%), Positives = 58/111 (52%)
Frame = +1 / -2
Query: 190 ERVLAVNLVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLT 369
+++ AVN+ G KHAAR MV G +I +K ++ L
Sbjct: 710 DKLFAVNVRGTAACLKHAARAMVDGGVKGSVICTSSAAANMGGDRFTDYIMSKSGVLALM 531
Query: 370 ENAAAELGQHGIRVNCVSPAGVATPLTMRYMGLEAEALEQAMEGMANLKGV 522
+ A+ +LG+HGIRVNCVSP VATPLT + + + E +E A + LKGV
Sbjct: 530 KCASYQLGEHGIRVNCVSPGLVATPLTCKTLEMGVEEVENAFQSCYYLKGV 378
Score = 47.3 bits (97), Expect(2) = 5e-024
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1 / -2
Query: 523 GALRVHDVAAAVRFLASDDARYISGHNLFVDGG 621
G L+ +A AV FLASDD+ +++G NL VDGG
Sbjct: 383 GVLKAKHIADAVLFLASDDSEFVTGQNLIVDGG 285
>gb|BU884372.1|BU884372 R009G06 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 659
Score = 56.1 bits (116), Expect(3) = 7e-024
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +1 / +3
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTMRYMG 465
+K A+V LT++ +ELGQ GIRVNC+SPA V TPL G
Sbjct: 507 SKHAIVGLTKSLCSELGQFGIRVNCISPAAVPTPLMRNAFG 629
Score = 47.3 bits (97), Expect(3) = 7e-024
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+F+RV N+ G FLG KHA+RVM+P ++G I
Sbjct: 351 NFKRVFDTNVYGAFLGAKHASRVMIPEKKGSII 449
Score = 45.1 bits (92), Expect(3) = 7e-024
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +1 / +3
Query: 34 SYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSG 147
SYVHCDVT E +G DI F+NAGV G
Sbjct: 201 SYVHCDVTRESDVEKAVNTAVSKYGKFDIFFSNAGVLG 314
>gb|BU884371.1|BU884371 R009G05 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 650
Score = 55.6 bits (115), Expect(3) = 1e-023
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +1 / +3
Query: 343 AKRAMVTLTENAAAELGQHGIRVNCVSPAGVATPLTMRYMG 465
+K A+V LT++ +ELGQ GIRVNC+SPA V TPL G
Sbjct: 507 SKHAIVGLTKSLCSELGQFGIRVNCISPAXVPTPLMRNAFG 629
Score = 47.3 bits (97), Expect(3) = 1e-023
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 184 DFERVLAVNLVGPFLGTKHAARVMVPSRRGGCI 282
+F+RV N+ G FLG KHA+RVM+P ++G I
Sbjct: 351 NFKRVFDTNVYGAFLGAKHASRVMIPEKKGSII 449
Score = 45.1 bits (92), Expect(3) = 1e-023
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +1 / +3
Query: 34 SYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSG 147
SYVHCDVT E +G DI F+NAGV G
Sbjct: 201 SYVHCDVTRESDVEKAVNTAVSKYGKFDIFFSNAGVLG 314
>gb|BU814736.1|BU814736 N032E06 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 757
Score = 80.3 bits (169), Expect(2) = 1e-023
Identities = 39/111 (35%), Positives = 56/111 (50%)
Frame = +1 / +1
Query: 190 ERVLAVNLVGPFLGTKHAARVMVPSRRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLT 369
+++ AVN+ G KHAAR MV G +I +K ++ L
Sbjct: 28 DKLFAVNVRGTAACLKHAARAMVDGGVKGSVICTSSAAATLVGDKSTDYIMSKSGVLALM 207
Query: 370 ENAAAELGQHGIRVNCVSPAGVATPLTMRYMGLEAEALEQAMEGMANLKGV 522
+ A+ +LG+HGIRVNCVSP VATPL + + E +E+ + LKGV
Sbjct: 208 KCASYQLGEHGIRVNCVSPGPVATPLACKAFEMGVEEVEKFFQSSYYLKGV 360
Score = 49.6 bits (102), Expect(2) = 1e-023
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1 / +1
Query: 523 GALRVHDVAAAVRFLASDDARYISGHNLFVDGGISV 630
G L+ +A AV FLASDD+ +++G NL VDGG +V
Sbjct: 355 GVLKTKHIADAVLFLASDDSEFVTGQNLIVDGGFNV 462
>gb|DT507209.1|DT507209 WS02417.BR_K09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K09 5', mRNA sequence
Length = 765
Score = 75.3 bits (158), Expect(2) = 7e-023
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +1 / +3
Query: 31 ASYVHCDVTSEXXXXXXXXXXXXTFGALDIMFNNAGVSGPACYSVRESGKADFERVLAVN 210
A+++ CDVT E + LDI++NNAGV+ + +S+ + + F+R++ +N
Sbjct: 327 ATFISCDVTKESDVSGAVDFAISKYNQLDILYNNAGVACKSPHSIVDLDLSVFDRIMNIN 506
Query: 211 LVGPFLGTKHAARVMVPSRRGGCI 282
+ G G KHA+RVM+P R G +
Sbjct: 507 VRGVMAGVKHASRVMIPRRSGAIL 578
Score = 52.4 bits (108), Expect(2) = 7e-023
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1 / +3
Query: 265 RRGGCIIXXXXXXXXXXXXXXXXXXCAKRAMVTLTENAAAELGQHGIRVNCVSPAGVATP 444
RR G I+ +K A+ + ++ AAEL +HGIR+NC+SP + TP
Sbjct: 558 RRSGAILCTASITGLMGGLAQHTYSVSKFAVAGIVKSLAAELCKHGIRINCISPFAIPTP 737
Query: 445 LTMRYM 462
M M
Sbjct: 738 FVMEEM 755
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 344,341,119
Number of Sequences: 369679
Number of extensions: 4048402
Number of successful extensions: 51793
Number of sequences better than 1.0e-020: 66
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 12922168280
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)