TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.2
(1076 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA823228.1|CA823228 R22G04 two-month-old roots from clon... 364 e-112
gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus... 367 e-101
gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus ... 221 1e-089
gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA li... 265 7e-077
gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus ... 232 8e-062
gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichoca... 232 4e-060
gb|BU832929.1|BU832929 T039H07 Populus apical shoot cDNA li... 144 3e-058
gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus tricho... 132 2e-048
gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichoca... 192 4e-048
gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Po... 129 3e-045
gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library P... 129 3e-045
gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA librar... 129 4e-045
gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus ... 128 8e-045
gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library... 127 3e-044
gb|CV269504.1|CV269504 WS0208.B21_G24 PTxN-IB-N-A-11 Populu... 177 1e-043
gb|BI138167.1|BI138167 F100P23Y Populus flower cDNA library... 133 4e-043
gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Popul... 128 3e-042
gb|CK090838.1|CK090838 F027P19.3pR Populus flower cDNA libr... 170 2e-041
gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremonti... 95 9e-039
gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Po... 95 6e-038
gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium... 129 9e-037
gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Popu... 128 2e-036
gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6... 106 6e-036
gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA librar... 126 2e-035
gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus... 128 5e-034
gb|CA931177.1|CA931177 MTU2TA.P3.D04 Aspen apex cDNA Librar... 138 3e-033
gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus ... 142 5e-033
gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus... 142 5e-033
gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremonti... 128 2e-032
gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cD... 128 2e-031
gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in... 132 5e-030
gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Po... 127 2e-029
gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated wit... 129 3e-029
gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Po... 128 6e-029
gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cD... 127 9e-029
gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium... 127 9e-029
gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Po... 126 3e-028
gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Po... 126 3e-028
gb|DT488774.1|DT488774 WS02537.B21_G04 PT-MB-N-A-15 Populus... 126 3e-028
gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid lib... 116 2e-025
gb|DN484863.1|DN484863 K029P19.3pR Populus apical shoot cDN... 114 9e-025
gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus tri... 114 1e-024
gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA librar... 112 4e-024
gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid lib... 100 3e-023
gb|CK103023.1|CK103023 G100P25.5pR Populus tension wood cDN... 63 2e-021
gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library... 96 4e-021
>gb|CA823228.1|CA823228 R22G04 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 659
Score = 364 bits (790), Expect(2) = e-112
Identities = 141/172 (81%), Positives = 158/172 (91%)
Frame = -1 / +2
Query: 938 ETDDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEK 759
ET+D+G+IRE L+DFY +SGKRKPDQ+IIFRDGVSESQFNQVLNIEL QIIEACKFLDEK
Sbjct: 140 ETEDEGIIRELLLDFYVTSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEK 319
Query: 758 WNPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPT 579
W+P F +I+AQKNHHTKFF PG PDNVP GT++DNKVCHPRN DFY+C+HAGMIGTTRPT
Sbjct: 320 WSPTFVVIVAQKNHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPT 499
Query: 578 HYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQ 423
HYH+L DE+GF+ DDLQ VHSLSYVYQRSTTAISVVAPICYAHLAA Q+GQ
Sbjct: 500 HYHVLLDEVGFSADDLQXPVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQ 655
Score = 199 bits (429), Expect(2) = 4e-061
Identities = 101/159 (63%), Positives = 108/159 (67%)
Frame = +1 / -3
Query: 421 NCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPI 600
N P AARWA*Q+GATT+MAVVLLWY KP SS + **VGLVVPI
Sbjct: 657 NWPI*VAARWA*QIGATTEMAVVLLWYTYERECTGSCRSSAEKPTSSNKTW**VGLVVPI 478
Query: 601 IPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQ 780
IPA *KS FLG QTLLS VP GTLSG PG KNLVW FF A I N+G HFSSRNL
Sbjct: 477 IPA*AQR*KSLFLGWQTLLSMIVPGGTLSGDPGWKNLVWWFF*ATITTNVGDHFSSRNLH 298
Query: 781 ASMICCNSMFSTWLN*LSLTPSLKMMTWSGFLFPELV*K 897
AS+I NS+F T LN SLTPSL MM SGFLFPE+ *K
Sbjct: 297 ASII*SNSIFKT*LNCDSLTPSLNMMI*SGFLFPEVT*K 181
Score = 158 bits (340), Expect(2) = 3e-041
Identities = 77/171 (45%), Positives = 108/171 (63%)
Frame = +3 / -2
Query: 423 LPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNH 602
L +L C+VG+AD G A LV++ E +H+ LQ+I + LV Q+++VS P SPNH
Sbjct: 655 LAHLSSCQVGIADWCXYRDGSRASLVYI*EGMHRXLQIIC*KTNLV*QNMVVSRPCSPNH 476
Query: 603 SSM*THVEIEVPWMTDFVVNNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFAS 782
SM T +E+ V WM DFVVN+ W II SR EKFSVV+ L + + P LIKK A
Sbjct: 475 PSMSTEIEVIVSWMADFVVNDRTRWYIIRRSRLEKFSVVVFLSYNYHKRWGPLLIKKLAR 296
Query: 783 LNDLLQLNVQHLVKLTFTNTVPEDDDLVRLSLP*TGVEVNQTLPNQTIVIS 935
LN L+Q N+Q L++L FT+ V + DDL+ *+ ++V Q LPN + ++S
Sbjct: 295 LNYLIQFNIQDLIEL*FTDPVSKYDDLIGFPFS*SHIKV*QKLPNYSFILS 143
Score = 62.9 bits (131), Expect(2) = e-112
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -1 / +2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDD 924
R+WPLIS+YRA VRTQSPK+EMIDSLFK +D
Sbjct: 47 RQWPLISRYRACVRTQSPKLEMIDSLFKRVSETED 151
Score = 56.5 bits (117), Expect(2) = 4e-061
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1 / -3
Query: 946 LNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDXTS 1062
LNNESIIS FGD VRT A EI+GH ELTTAA + TS
Sbjct: 129 LNNESIISSFGDCVRTHAR*REIKGHCLELTTAAIEGTS 13
Score = 30.9 bits (61), Expect(2) = 3e-041
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3 / -2
Query: 945 LKQRVNHFHFW*LGADRCSVFRDKRPFTRTNHSSN 1049
LK +NH W L + C + R++RP ++ SN
Sbjct: 130 LK**INHLKLWGLCSHTCPIARNQRPLPGADYRSN 26
>gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01917_G04 3', mRNA sequence
Length = 809
Score = 367 bits (795), Expect = e-101
Identities = 146/200 (73%), Positives = 163/200 (81%)
Frame = -1 / -3
Query: 893 YTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHH 714
Y SSG+ KP Q+IIFRDGVSESQFNQVLNIEL QIIEACKFLDE W+PKFT+I+AQKNHH
Sbjct: 807 YRSSGQTKPAQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDESWSPKFTVIVAQKNHH 628
Query: 713 TKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDD 534
TKFF G PDNVP GTV+DN VCHP+++DFYMC+HAGMIGTTRPTHYH+L DEIGF+ DD
Sbjct: 627 TKFFQDGSPDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADD 448
Query: 533 LQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSV 354
LQEL+HSLSYVYQRSTTAISVVAP+ YAHLAA Q+ QF+K D+M
Sbjct: 447 LQELIHSLSYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQT 268
Query: 353 PVQELPRLHEKVRSSMFFC* 294
PV ELP LH V SSMFFC*
Sbjct: 267 PVPELPELHRNVCSSMFFC* 208
Score = 179 bits (386), Expect = 2e-044
Identities = 87/190 (45%), Positives = 119/190 (62%)
Frame = +3 / +1
Query: 294 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 473
SAE+H A + +L R R MAR L H++ L EL NL C+V + D SN
Sbjct: 208 SAEKHRAADIPV*LRKLGHRGLPSRS*TSMARGCL*HVITLQEL*NLSCCQVSITDRSNY 387
Query: 474 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 653
Y CCA LVH+R+RV+QLL +I +A L+ ++VI+ WP H M THVEI W+T+
Sbjct: 388 RYCCCASLVHIRQRVNQLL*IIS*KANLI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNS 567
Query: 654 VVNNSASWNIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTF 833
++NN + NI+W S EKFSV+I L N+ ELG P IK+ A LNDL+QL+V+ L++L
Sbjct: 568 IINNGSRRNIVWRSILEKFSVMIFLCNNNSELG*PAFIKELACLNDLIQLDVEDLIEL*L 747
Query: 834 TNTVPEDDDL 863
N++PE D L
Sbjct: 748 ANSIPEYDYL 777
Score = 150 bits (323), Expect(2) = 2e-062
Identities = 79/116 (68%), Positives = 85/116 (73%)
Frame = +1 / +2
Query: 547 KPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FF 726
KPISS R ** VGLVVPIIPAC HM*KS G*QT LS TVP GTLSG P KNLV *FF
Sbjct: 461 KPISSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPGGTLSGDPSWKNLV**FF 640
Query: 727 WAMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSLTPSLKMMTWSGFLFPELV* 894
A I VNLG SSRNL ASMI +SM T LN SLTPSL M+ +GF++PEL+*
Sbjct: 641 CATITVNLGDQLSSRNLHASMI*SSSMLRT*LNCDSLTPSLNMII*AGFVWPELL* 808
Score = 109 bits (232), Expect(2) = 2e-062
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = +1 / +2
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKN+EL TF C GSS TG PAEV PPWL++VSD+SS+F NC AA+ A*+ GATT
Sbjct: 209 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATT 388
Query: 475 DMAVVLLWY 501
D+AVVLLWY
Sbjct: 389 DIAVVLLWY 415
>gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_O23 3', mRNA sequence
Length = 872
Score = 221 bits (476), Expect(2) = 1e-089
Identities = 88/132 (66%), Positives = 101/132 (76%)
Frame = -1 / -3
Query: 689 PDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSL 510
P + AGTV+DN VCHP+++DFYMC+HAGMIGTTRPTHYH+L DEIGF+ DDLQEL+HSL
Sbjct: 618 PFSQHAGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSL 439
Query: 509 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRL 330
SYVYQRSTTAISVVAP+ YAHLAA Q+ QF+K D+M PV ELP L
Sbjct: 438 SYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQTPVPELPEL 259
Query: 329 HEKVRSSMFFC* 294
H V SSMFFC*
Sbjct: 258 HRNVCSSMFFC* 223
Score = 130 bits (278), Expect(2) = 1e-089
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = -1 / -2
Query: 848 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPAG 669
RDGVSESQFNQVLNIEL QIIEACKFLDE W+PKFT+I+AQKNHHTKFF G PDNVP G
Sbjct: 859 RDGVSESQFNQVLNIELDQIIEACKFLDESWSPKFTVIVAQKNHHTKFFQDGSPDNVPPG 680
Score = 110 bits (234), Expect(2) = 2e-038
Identities = 54/126 (42%), Positives = 75/126 (59%)
Frame = +3 / +1
Query: 294 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 473
SAE+H A + +L R R MAR L H++ L EL NL C+V + D SN
Sbjct: 223 SAEKHRAADIPV*LRKLGHRGLPSRS*TSMARGCL*HVITLQEL*NLSCCQVSITDRSNY 402
Query: 474 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 653
Y CCA LVH+R+RV+QLL +I +A L+ ++VI+ WP H M THVEI W+T+
Sbjct: 403 RYCCCASLVHIRQRVNQLL*IIS*KANLI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNS 582
Query: 654 VVNNSA 671
++NN +
Sbjct: 583 IINNGS 600
Score = 109 bits (232), Expect(3) = 2e-054
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = +1 / +2
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKN+EL TF C GSS TG PAEV PPWL++VSD+SS+F NC AA+ A*+ GATT
Sbjct: 224 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATT 403
Query: 475 DMAVVLLWY 501
D+AVVLLWY
Sbjct: 404 DIAVVLLWY 430
Score = 76.2 bits (160), Expect(3) = 2e-054
Identities = 40/60 (66%), Positives = 41/60 (68%)
Frame = +1 / +3
Query: 670 PAGTLSGFPGMKNLVW*FFWAMINVNLGFHFSSRNLQASMICCNSMFSTWLN*LSLTPSL 849
P GTLSG P KNLV *FF A I VNLG SSRNL ASMI +SM T LN SLTPSL
Sbjct: 681 PGGTLSGDPSWKNLV**FFCATITVNLGDQLSSRNLHASMI*SSSMLRT*LNCDSLTPSL 860
Score = 70.3 bits (147), Expect(2) = 2e-038
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +3 / +2
Query: 678 NIIWLSRNEKFSVVILLGNDQCELGIPFLIKKFASLNDLLQLNVQHLVKLTFTNTVP 848
NI+W S EKFSV+I L N+ ELG P IK+ A LNDL+QL+V+ L++L N++P
Sbjct: 689 NIVWRSILEKFSVMIFLCNNNSELG*PAFIKELACLNDLIQLDVEDLIEL*LANSIP 859
Score = 67.0 bits (140), Expect(3) = 2e-054
Identities = 34/43 (79%), Positives = 34/43 (79%)
Frame = +1 / +2
Query: 547 KPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPA 675
KPISS R ** VGLVVPIIPAC HM*KS G*QT LS TVPA
Sbjct: 476 KPISSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPA 604
>gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 574
Score = 265 bits (574), Expect(2) = 7e-077
Identities = 104/146 (71%), Positives = 119/146 (81%)
Frame = -1 / +1
Query: 728 QKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIG 549
+KNHHTKFF PG PDNVP GT++DNKVCHPRN DFY+C+HAGMIGTTRPTHYH+L DE+
Sbjct: 64 RKNHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVS 243
Query: 548 FNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXX 369
F+ DDLQELVHSLSYV QRSTTAISVVAPICYAHLAA Q+GQF+KF++
Sbjct: 244 FSADDLQELVHSLSYVCQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVT 423
Query: 368 XXXSVPVQELPRLHEKVRSSMFFC*A 291
+VPV +LPRL EKV +SMFFC*A
Sbjct: 424 SAGAVPVPQLPRLQEKVCNSMFFC*A 501
Score = 198 bits (426), Expect(2) = 4e-053
Identities = 93/145 (64%), Positives = 102/145 (70%)
Frame = +1 / -3
Query: 292 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
AQQKNMEL TFSC G+ TGT PA+V PPWL+EVSD+SSNF+N P AARWA*Q+GAT
Sbjct: 500 AQQKNMELQTFSCSLGNCGTGTAPADVTPPWLEEVSDVSSNFINWPI*VAARWA*QIGAT 321
Query: 472 TDMAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QT 651
T+MAVVLLW+ K SS + **VGLVVPIIPA *KS FLG QT
Sbjct: 320 TEMAVVLLWHTYERECTSSCRSSAEKLTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQT 141
Query: 652 LLSTTVPAGTLSGFPGMKNLVW*FF 726
LLS VP GTLSG PG KNLVW FF
Sbjct: 140 LLSMIVPGGTLSGDPGWKNLVWWFF 66
Score = 145 bits (312), Expect(2) = 3e-035
Identities = 68/144 (47%), Positives = 95/144 (65%)
Frame = +3 / -2
Query: 291 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 470
CS +EHG +FL+Q QL DR+++ R P MA SL + +L++L +L C+VG+AD N
Sbjct: 501 CSTKEHGIANFLLQPRQLWDRNSSCRCHPAMA*GSLGRVFKLHKLAHLSSCQVGIADWCN 322
Query: 471 N*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTD 650
G A L ++ E +H+ LQ+I + LV Q+++VS P SPNH SM T +E+ V WM D
Sbjct: 321 YRDGSRASLAYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNHPSMSTEIEVIVSWMAD 142
Query: 651 FVVNNSASWNIIWLSRNEKFSVVI 722
FVVN+ W+II SR EKFSVV+
Sbjct: 141 FVVNDRTRWDIIRRSRLEKFSVVV 70
Score = 42.8 bits (87), Expect(2) = 7e-077
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 788 IEACKFLDEKWNPKFTLIIAQK 723
IEACKFL E+W+P F +I+AQK
Sbjct: 3 IEACKFLYERWSPTFAVIVAQK 68
Score = 31.3 bits (62), Expect(2) = 4e-053
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 721 FFWAMINVNLGFHFSSRNLQASM 789
FF A I N+G H S RNLQAS+
Sbjct: 70 FF*ATITANVGDHLS*RNLQASI 2
Score = 23.5 bits (45), Expect(2) = 3e-035
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2 / -2
Query: 746 TWDSISHQEICKPQ 787
T + SH+E CKPQ
Sbjct: 45 TLGTTSHKETCKPQ 4
>gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_P22 3', mRNA sequence
Length = 744
Score = 232 bits (500), Expect(2) = 8e-062
Identities = 91/127 (71%), Positives = 105/127 (82%)
Frame = -1 / -2
Query: 671 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 492
GT++DNKVCHPRN DFY+C+HAGMIGTTRPTHYH+L DE+GF+ DDLQELVHSLSYVYQR
Sbjct: 710 GTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQR 531
Query: 491 STTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRS 312
STTAISVVAPICYAHLAA Q+GQF+KF++ +VPV +LPRL EKV +
Sbjct: 530 STTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCN 351
Query: 311 SMFFC*A 291
SMFFC*A
Sbjct: 350 SMFFC*A 330
Score = 171 bits (369), Expect(2) = 9e-043
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +1 / +1
Query: 292 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
AQQKNMEL TFSC G+ TGT PAEV PPWL+EVS++SSNF+N P AARWA*Q+GAT
Sbjct: 331 AQQKNMELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 510
Query: 472 TDMAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QT 651
T+MAVVLLWY KP SS + **VGLVVPIIPA *KS FLG QT
Sbjct: 511 TEMAVVLLWYTYERECTSSCRSSAEKPTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQT 690
Query: 652 LLSTTVP 672
LLS VP
Sbjct: 691 LLSMIVP 711
Score = 132 bits (282), Expect = 5e-030
Identities = 60/125 (48%), Positives = 85/125 (68%)
Frame = +3 / +3
Query: 291 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 470
CS +EHG +FL+Q QL DR+++ RG P MA SLR + +L++L +L C+VG+AD N
Sbjct: 330 CSTKEHGIANFLLQPRQLWDRNSSCRGHPTMA*GSLRSIFKLHKLAHLSSCQVGIADWCN 509
Query: 471 N*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTD 650
G A LV++ E +H+ LQ+I + LV Q+++VS P SPNH SM T +E+ V WM D
Sbjct: 510 YRDGSRASLVYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNHPSMSTEIEVIVSWMAD 689
Query: 651 FVVNN 665
FVVN+
Sbjct: 690 FVVND 704
Score = 26.3 bits (51), Expect(2) = 8e-062
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 773 FLDEKWNPKFTL 738
FLDEKW+P F +
Sbjct: 742 FLDEKWSPTFVV 707
Score = 22.6 bits (43), Expect(2) = 9e-043
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 745 NLGFHFSSRN 774
N+G HFSSRN
Sbjct: 714 NVGDHFSSRN 743
>gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_L05 5', mRNA sequence
Length = 554
Score = 232 bits (500), Expect = 4e-060
Identities = 91/132 (68%), Positives = 103/132 (78%)
Frame = -1 / +2
Query: 689 PDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSL 510
PDNVP GTV+DN VCHP+++DFYMC+HAGMIGTTRPTHYH+L DEIGF+ DDLQEL+HSL
Sbjct: 5 PDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSL 184
Query: 509 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRL 330
SYVYQRSTTAISVVAP+ YAHLAA Q+ QF+K D+M PV ELP L
Sbjct: 185 SYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQTPVPELPEL 364
Query: 329 HEKVRSSMFFC* 294
H V SSMFFC*
Sbjct: 365 HRNVCSSMFFC* 400
Score = 119 bits (254), Expect = 4e-026
Identities = 57/132 (43%), Positives = 79/132 (59%)
Frame = +3 / -2
Query: 294 SAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN 473
SAE+H A + +L R R MAR L H++ L EL NL C+V + D SN
Sbjct: 400 SAEKHRAADIPV*LRKLGHRGLPSRS*TSMARGCL*HVITLQEL*NLSCCQVSITDRSNY 221
Query: 474 *YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDF 653
Y CCA LVH+R+RV+QLL +I +A L+ ++VI+ WP H M THVEI W+T+
Sbjct: 220 RYCCCASLVHIRQRVNQLL*IIS*KANLI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNS 41
Query: 654 VVNNSASWNIIW 689
++NN + NI+W
Sbjct: 40 IINNGSRRNIVW 5
Score = 109 bits (232), Expect(2) = 4e-040
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = +1 / -3
Query: 295 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 474
QQKN+EL TF C GSS TG PAEV PPWL++VSD+SS+F NC AA+ A*+ GATT
Sbjct: 399 QQKNIELQTFRCSSGSSGTGVCPAEVRPPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATT 220
Query: 475 DMAVVLLWY 501
D+AVVLLWY
Sbjct: 219 DIAVVLLWY 193
Score = 76.7 bits (161), Expect(2) = 4e-040
Identities = 38/48 (79%), Positives = 38/48 (79%)
Frame = +1 / -3
Query: 547 KPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSG 690
KPISS R ** VGLVVPIIPAC HM*KS G*QT LS TVP GTLSG
Sbjct: 147 KPISSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPGGTLSG 4
>gb|BU832929.1|BU832929 T039H07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 563
Score = 144 bits (308), Expect(2) = 3e-058
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = -1 / +1
Query: 689 PDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSL 510
PDNVP GT++DNKVCHPRN DFY+C+HAGMIGTTRPTHYH+L DE+GF+ DDLQELVHSL
Sbjct: 31 PDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSL 210
Query: 509 SYV 501
SYV
Sbjct: 211 SYV 219
Score = 126 bits (269), Expect(2) = 1e-043
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = +1 / -3
Query: 292 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
AQQKNMEL TFSC G+ TGT PA+V PPWL+EVSD+SSNF+N P AARWA*Q+GA
Sbjct: 429 AQQKNMELQTFSCNLGNCGTGTAPADVTPPWLEEVSDVSSNFINWPI*VAARWA*QIGAA 250
Query: 472 TDMAVVLLWY 501
T+MAVVLLWY
Sbjct: 249 TEMAVVLLWY 220
Score = 102 bits (217), Expect(2) = 3e-058
Identities = 43/70 (61%), Positives = 50/70 (71%)
Frame = -1 / +2
Query: 500 YQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEK 321
YQRSTTAISV APICYAHLAA Q+GQF+KF++ +VPV +LPRL EK
Sbjct: 221 YQRSTTAISVAAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEK 400
Query: 320 VRSSMFFC*A 291
V +SMFFC*A
Sbjct: 401 VCNSMFFC*A 430
Score = 71.6 bits (150), Expect(2) = 1e-043
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +3 / -3
Query: 510 ERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSASWNII 686
E +H+ LQ+I + LV Q+++VS P SPNH SM T +E+ V WM DFVVN+ W+II
Sbjct: 210 EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNHPSMSTEIEVIVSWMADFVVNDRTRWDII 34
Score = 64.3 bits (134), Expect(2) = 3e-022
Identities = 35/55 (63%), Positives = 38/55 (69%)
Frame = +1 / -1
Query: 547 KPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNL 711
KP SS + **VGLVVPIIPA *KS FLG QTLLS VP GTLSG ++ L
Sbjct: 173 KPTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQTLLSMIVPGGTLSGDARLEKL 9
Score = 61.6 bits (128), Expect(2) = 3e-022
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +3 / -2
Query: 291 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 470
CS +EHG +FL+Q QL DR+++ R P MA SL + +L++L +L C+VG+AD +
Sbjct: 430 CSTKEHGIANFLLQPRQLWDRNSSCRCHPTMA*GSLGRVFKLHKLAHLSSCQVGIADWCS 251
Query: 471 N*YGCCAPLV 500
G A LV
Sbjct: 250 YRDGSRASLV 221
>gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_E09 5', mRNA sequence
Length = 849
Score = 132 bits (282), Expect(2) = 2e-048
Identities = 52/101 (51%), Positives = 67/101 (66%)
Frame = -1 / +3
Query: 716 HTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPD 537
H K + K N+ GTVVD K+CHP FDFY+ SHAG+ GT+RPTHYH+L DE F D
Sbjct: 243 HNKRDLTDKSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFTAD 422
Query: 536 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIK 414
LQ L ++L Y Y R T ++S+V P YAHLAA + +I+
Sbjct: 423 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 545
Score = 81.3 bits (171), Expect(2) = 2e-048
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = -1 / +3
Query: 893 YTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHH 714
+ S +KP ++I +RDGVSE QF+QVL E+Q I EAC L+E + P+ T ++ QK HH
Sbjct: 42 FRRSTGQKPHRIIFYRDGVSEGQFSQVLLHEMQAIREACGTLEEGYCPRVTFVVVQKRHH 221
Query: 713 TKFF 702
T+FF
Sbjct: 222 TRFF 233
>gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_E10 5', mRNA sequence
Length = 695
Score = 192 bits (413), Expect = 4e-048
Identities = 77/113 (68%), Positives = 89/113 (78%)
Frame = -1 / +1
Query: 629 DFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYA 450
DFY+C+HAGM TRPTHYH+L DE+GF+ DDLQELVHSLSYVYQRSTTAISVVAPICYA
Sbjct: 1 DFYLCAHAGMXXXTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYA 180
Query: 449 HLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSSMFFC*A 291
HLAA Q+GQF+KF++ +VPV +LPRL EKV +SMFFC*A
Sbjct: 181 HLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFFC*A 339
Score = 144 bits (310), Expect = 7e-034
Identities = 66/106 (62%), Positives = 74/106 (69%)
Frame = +1 / -1
Query: 292 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
AQQKNMEL TFSC G+ TGT PAEV PPWL+EVS++SSNF+N P AARWA*Q+GAT
Sbjct: 338 AQQKNMELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 159
Query: 472 TDMAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPIIPA 609
T+MAVVLLWY KP SS + **VGLV IIPA
Sbjct: 158 TEMAVVLLWYTYERECTSSCRSSAEKPTSSNKTW**VGLVXXIIPA 21
Score = 103 bits (219), Expect = 2e-021
Identities = 49/113 (43%), Positives = 73/113 (64%)
Frame = +3 / -3
Query: 291 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 470
CS +EHG +FL+Q QL DR+++ RG P MA SLR + +L++L +L C+VG+AD N
Sbjct: 339 CSTKEHGIANFLLQPRQLWDRNSSCRGHPTMA*GSLRSIFKLHKLAHLSSCQVGIADWCN 160
Query: 471 N*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEI 629
G A LV++ E +H+ LQ+I + LV Q+++VS P H SM T +E+
Sbjct: 159 YRDGSRASLVYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCXXXHPSMSTEIEV 1
>gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 618
Score = 129 bits (276), Expect(2) = 3e-045
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / +1
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 256 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 435
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 436 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 540
Score = 73.5 bits (154), Expect(2) = 3e-045
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = -1 / +1
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 79 QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 252
>gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 129 bits (276), Expect(2) = 3e-045
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / +2
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 212 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 391
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 392 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 496
Score = 73.5 bits (154), Expect(2) = 3e-045
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = -1 / +2
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 35 QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 208
>gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 129 bits (276), Expect(2) = 4e-045
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / +2
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 176 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 355
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 356 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 460
Score = 73.0 bits (153), Expect(2) = 4e-045
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = -1 / +2
Query: 872 KPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 2 KPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 172
>gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_O22 3', mRNA sequence
Length = 875
Score = 128 bits (275), Expect(2) = 8e-045
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / -1
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 680 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 501
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 500 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 396
Score = 72.5 bits (152), Expect(2) = 8e-045
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = -1 / -1
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 857 QKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 684
>gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 610
Score = 127 bits (271), Expect(2) = 3e-044
Identities = 47/80 (58%), Positives = 60/80 (75%)
Frame = -1 / +3
Query: 671 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 492
GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R
Sbjct: 366 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYAR 545
Query: 491 STTAISVVAPICYAHLAAAQ 432
T ++S+V P YAHLAA++
Sbjct: 546 CTRSVSIVPPAYYAHLAASR 605
Score = 72.5 bits (152), Expect(2) = 3e-044
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = -1 / +2
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 140 QKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 313
>gb|CV269504.1|CV269504 WS0208.B21_G24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0208_G24 3', mRNA sequence
Length = 719
Score = 177 bits (381), Expect = 1e-043
Identities = 73/104 (70%), Positives = 83/104 (79%)
Frame = -1 / -3
Query: 602 MIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQ 423
MIGTTRPTHYH+L DE+GF+ DDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA Q+GQ
Sbjct: 717 MIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQ 538
Query: 422 FIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSSMFFC*A 291
F+KF++ +VPV +LPRL EKV +SMFFC*A
Sbjct: 537 FMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFFC*A 406
Score = 148 bits (317), Expect = 7e-035
Identities = 67/104 (64%), Positives = 74/104 (71%)
Frame = +1 / +2
Query: 292 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
AQQKNMEL TFSC G+ TGT PAEV PPWL+EVS++SSNF+N P AARWA*Q+GAT
Sbjct: 407 AQQKNMELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 586
Query: 472 TDMAVVLLWYXXXXXXXXXXXXXGLKPISSCRM***VGLVVPII 603
TDMAVVLLWY KP SS + **VGLVVPII
Sbjct: 587 TDMAVVLLWYTYERECTSSCRSSAEKPTSSNKTW**VGLVVPII 718
Score = 107 bits (229), Expect = 1e-022
Identities = 49/104 (47%), Positives = 71/104 (68%)
Frame = +3 / +1
Query: 291 CSAEEHGAPHFLMQTGQLLDRDAARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSN 470
CS +EHG +FL+Q QL DR+++ RG P MA SLR + +L++L +L C+VG+AD N
Sbjct: 406 CSTKEHGIANFLLQPRQLWDRNSSCRGHPTMA*GSLRSIFKLHKLAHLSSCQVGIADWCN 585
Query: 471 N*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNH 602
YG A LV++ E +H+ LQ+I + LV Q+++VS P SPNH
Sbjct: 586 YRYGSRASLVYI*EGMHKFLQIIC*KTNLV*QNMVVSRPCSPNH 717
>gb|BI138167.1|BI138167 F100P23Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 514
Score = 133 bits (284), Expect(2) = 4e-043
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = -1 / +3
Query: 938 ETDDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEK 759
ET+D+G+IRE L+DFY +SGKRKPDQ+IIFRDGVSESQFNQVLNIEL QIIEACKFLDEK
Sbjct: 327 ETEDEGIIRELLLDFYVTSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEK 506
Query: 758 WN 753
W+
Sbjct: 507 WS 512
Score = 69.8 bits (146), Expect(2) = 2e-022
Identities = 34/49 (69%), Positives = 37/49 (75%)
Frame = +1 / -1
Query: 751 GFHFSSRNLQASMICCNSMFSTWLN*LSLTPSLKMMTWSGFLFPELV*K 897
G HFSSRNL AS+I NS+F T LN SLTPSL MM SGFLFPE+ *K
Sbjct: 514 GDHFSSRNLHASII*SNSIFKT*LNCDSLTPSLNMMI*SGFLFPEVT*K 368
Score = 62.9 bits (131), Expect(2) = 4e-043
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -1 / +3
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDD 924
R+WPLIS+YRA VRTQSPK+EMIDSLFK +D
Sbjct: 234 RQWPLISRYRACVRTQSPKLEMIDSLFKRVSETED 338
Score = 56.5 bits (117), Expect(2) = 2e-022
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1 / -1
Query: 946 LNNESIISIFGDWVRTDALYFEIRGHSRELTTAATDXTS 1062
LNNESIIS FGD VRT A EI+GH ELTTAA + TS
Sbjct: 316 LNNESIISSFGDCVRTHAR*REIKGHCLELTTAAIEGTS 200
>gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_C18 3', mRNA sequence
Length = 960
Score = 128 bits (275), Expect(2) = 3e-042
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / -3
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 772 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 593
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 592 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 488
Score = 63.8 bits (133), Expect(2) = 3e-042
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = -1 / -3
Query: 851 FRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 925 YRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 776
>gb|CK090838.1|CK090838 F027P19.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F027P19 3', mRNA sequence
Length = 680
Score = 170 bits (365), Expect = 2e-041
Identities = 68/109 (62%), Positives = 81/109 (74%)
Frame = -1 / -2
Query: 614 SHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAA 435
+ ++GT+RP HYH+L DEIGF+PD+L LVHSLSYVYQRSTTA+S+VAPICYAHLAAA
Sbjct: 670 NRCSLLGTSRPAHYHVLLDEIGFSPDELLNLVHSLSYVYQRSTTAVSIVAPICYAHLAAA 491
Query: 434 QVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKVRSSMFFC*AA 288
Q+GQF+KF++ S PV ELPRLHE V SMFFC* A
Sbjct: 490 QIGQFMKFEDFFEPFSGQRSMTSVGSTPVPELPRLHENVEGSMFFC*GA 344
>gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 867
Score = 94.5 bits (200), Expect(3) = 9e-039
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = -1 / +1
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 667 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 846
Query: 542 PDDLQEL 522
D LQ L
Sbjct: 847 ADGLQSL 867
Score = 73.5 bits (154), Expect(3) = 9e-039
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = -1 / +1
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 490 QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 663
Score = 31.3 bits (62), Expect(3) = 9e-039
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1 / +1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQ 861
++WP ++KY V Q+ + E+I L+K + G + +I S +R Q
Sbjct: 325 QDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIKELLISFRRATGQ 492
>gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 814
Score = 94.5 bits (200), Expect(3) = 6e-038
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = -1 / +2
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 581 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENMFT 760
Query: 542 PDDLQEL 522
D LQ L
Sbjct: 761 ADGLQSL 781
Score = 70.7 bits (148), Expect(3) = 6e-038
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = -1 / +1
Query: 875 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTK 708
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+
Sbjct: 403 QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTR 570
Score = 31.3 bits (62), Expect(3) = 6e-038
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1 / +1
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDDGLIRECLIDFYTSSGKRKPDQ 861
++WP ++KY V Q+ + E+I L+K + G + +I S +R Q
Sbjct: 238 QDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIKELLISFRRATGQ 405
>gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB44DPH02 3', mRNA sequence
Length = 762
Score = 129 bits (276), Expect(3) = 9e-037
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / -2
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 545 NDHRDRTAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 366
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 365 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 261
Score = 34.5 bits (69), Expect(3) = 9e-037
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1 / -2
Query: 785 EACKFLDEKWNPKFTLIIAQKNHHTKFF 702
E FL+ + P T ++ QK HHT+ F
Sbjct: 632 EGMCFLEPNYQPPVTFVVVQKRHHTRLF 549
Score = 28.6 bits (56), Expect(3) = 9e-037
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1 / -1
Query: 884 SGKRKPDQVIIFRDGVSESQFNQVL 810
S + + + +RDGVSE QF QVL
Sbjct: 729 SHRAEASENYFYRDGVSEGQFYQVL 655
>gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_L23 3', mRNA sequence
Length = 910
Score = 128 bits (275), Expect(2) = 2e-036
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / -3
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 785 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 606
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 605 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 501
Score = 44.6 bits (91), Expect(2) = 2e-036
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1 / -3
Query: 818 QVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 905 QVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 789
>gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400030C07F1, mRNA sequence
Length = 687
Score = 106 bits (227), Expect(4) = 6e-036
Identities = 38/71 (53%), Positives = 53/71 (74%)
Frame = -1 / +2
Query: 686 DNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 507
+N+P GTVVD + HP+ FDFY+CSH G+ GT++PTHYH+L DE F D+LQ+LV++L
Sbjct: 473 ENIPPGTVVDTVITHPKEFDFYLCSHWGVKGTSKPTHYHVLWDENQFTSDELQKLVYNLC 652
Query: 506 YVYQRSTTAIS 474
Y + R T +S
Sbjct: 653 YTFVRCTKPVS 685
Score = 49.6 bits (102), Expect(4) = 6e-036
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = -1 / +2
Query: 869 PDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKF 705
P ++I FRDGVSE+QF +VL ELQ I EAC P ++ +++H F
Sbjct: 263 PKRIIFFRDGVSETQFYKVLKEELQAIREACSRFPGYRPPITFAVVQKRHHTRLF 427
Score = 27.2 bits (53), Expect(4) = 6e-036
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1 / +2
Query: 1022 WPLISKYRASVRTQSPKMEMIDSL 951
WP +KY + +R+Q+ + E+I L
Sbjct: 137 WPAANKYVSRMRSQTHRQEIIQDL 208
Score = 23.5 bits (45), Expect(4) = 6e-036
Identities = 5/6 (83%), Positives = 6/6 (100%)
Frame = -3 / +1
Query: 1053 VCCCCG 1036
+CCCCG
Sbjct: 106 ICCCCG 123
>gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041G07 3', mRNA sequence
Length = 811
Score = 126 bits (270), Expect(2) = 2e-035
Identities = 49/93 (52%), Positives = 64/93 (68%)
Frame = -1 / -3
Query: 692 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 513
K N+ GTVVD +CHP FDFY+ SHAG+ GT+RPTHYH+L DE F+ D LQ L ++
Sbjct: 653 KSGNILPGTVVDTTICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFSSDGLQTLTNN 474
Query: 512 LSYVYQRSTTAISVVAPICYAHLAAAQVGQFIK 414
L Y Y R T ++S+V P YAHLAA + +I+
Sbjct: 473 LCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 375
Score = 43.2 bits (88), Expect(2) = 2e-035
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -1 / -3
Query: 800 LQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+Q I +AC L E + P+ T ++ QK HHT+FF
Sbjct: 785 MQAIRQACGSLQEGYCPRVTFVVVQKRHHTRFF 687
>gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_J06 3', mRNA sequence
Length = 849
Score = 128 bits (275), Expect(2) = 5e-034
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / -2
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 761 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 582
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 581 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 477
Score = 36.3 bits (73), Expect(2) = 5e-034
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1 / -2
Query: 785 EACKFLDEKWNPKFTLIIAQKNHHTKFF 702
+AC L+ + P T ++ QK HHT+ F
Sbjct: 848 KACASLEPNYQPPVTFVVVQKRHHTRLF 765
>gb|CA931177.1|CA931177 MTU2TA.P3.D04 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 254
Score = 138 bits (296), Expect(2) = 3e-033
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = -1 / -1
Query: 896 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 717
FY +SGKRKPDQ+IIFRDGVSESQFNQVLNIEL QIIEACKFL EKW+P F +I+AQKNH
Sbjct: 224 FYVTSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLGEKWSPTFVVIVAQKNH 45
Query: 716 HTKF 705
HTKF
Sbjct: 44 HTKF 33
Score = 24.0 bits (46), Expect(2) = 3e-033
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -3
Query: 704 FIPGKPDNVP 675
F PG PDNVP
Sbjct: 33 FQPGSPDNVP 4
>gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 5', mRNA sequence
Length = 733
Score = 142 bits (304), Expect = 5e-033
Identities = 57/131 (43%), Positives = 79/131 (60%)
Frame = -1 / +3
Query: 686 DNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 507
+N+P GTVVD + HPR FDFY+CSH G+ GT+RPTHYH+L DE F D+LQ+LV++L
Sbjct: 18 ENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLC 197
Query: 506 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLH 327
Y + R T +S+V P YAHLAA + +++ E LP+L
Sbjct: 198 YTFVRCTKPVSLVPPAYYAHLAAYRGRLYLERSECMASIRNASTISRAAPPKAAPLPKLS 377
Query: 326 EKVRSSMFFC* 294
E ++ MF+C*
Sbjct: 378 ENLKKLMFYC* 410
>gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 3', mRNA sequence
Length = 733
Score = 142 bits (304), Expect = 5e-033
Identities = 57/131 (43%), Positives = 79/131 (60%)
Frame = -1 / -3
Query: 686 DNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 507
+N+P GTVVD + HPR FDFY+CSH G+ GT+RPTHYH+L DE F D+LQ+LV++L
Sbjct: 716 ENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLC 537
Query: 506 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLH 327
Y + R T +S+V P YAHLAA + +++ E LP+L
Sbjct: 536 YTFVRCTKPVSLVPPAYYAHLAAYRGRLYLERSECMASIRNASTISRAAPPKAAPLPKLS 357
Query: 326 EKVRSSMFFC* 294
E ++ MF+C*
Sbjct: 356 ENLKKLMFYC* 324
>gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 830
Score = 128 bits (275), Expect(2) = 2e-032
Identities = 50/95 (52%), Positives = 63/95 (66%)
Frame = -1 / -3
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 756 NDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 577
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 576 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 472
Score = 31.3 bits (62), Expect(2) = 2e-032
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 770 LDEKWNPKFTLIIAQKNHHTKFF 702
L+ + P T ++ QK HHT+ F
Sbjct: 828 LEPNYQPPVTFVVVQKRHHTRLF 760
>gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 503
Score = 128 bits (274), Expect(2) = 2e-031
Identities = 51/101 (50%), Positives = 66/101 (65%)
Frame = -1 / +2
Query: 716 HTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPD 537
H K + N+ GTVVD K+CHP FDFY+ SHAG+ GT+RPTHYH+L DE F D
Sbjct: 56 HNKRDQTDRSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFTAD 235
Query: 536 DLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIK 414
LQ L ++L Y Y R T ++S+V P YAHLAA + +I+
Sbjct: 236 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 358
Score = 28.1 bits (55), Expect(2) = 2e-031
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 740 LIIAQKNHHTKFF 702
L++ QK HHT+FF
Sbjct: 8 LVVVQKRHHTRFF 46
>gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700006E12F1, mRNA sequence
Length = 418
Score = 132 bits (282), Expect = 5e-030
Identities = 51/95 (53%), Positives = 64/95 (67%)
Frame = -1 / +2
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N+H K N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 32 NNHRDRTSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 211
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D +Q L ++L Y Y R T ++SVV P YAHLAA
Sbjct: 212 ADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAA 316
>gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 623
Score = 127 bits (272), Expect(2) = 2e-029
Identities = 49/95 (51%), Positives = 62/95 (65%)
Frame = -1 / +1
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 49 NDHRDRSAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 228
Query: 542 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
D LQ L ++L Y Y R T ++S+V P YAHL A
Sbjct: 229 ADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLVA 333
Score = 22.1 bits (42), Expect(2) = 2e-029
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1 / +2
Query: 743 TLIIAQKNHHT 711
T ++ QK HHT
Sbjct: 5 TFVVVQKRHHT 37
>gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 555
Score = 129 bits (276), Expect = 3e-029
Identities = 50/97 (51%), Positives = 64/97 (65%)
Frame = -1 / +3
Query: 728 QKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIG 549
+ N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE
Sbjct: 6 EANDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENK 185
Query: 548 FNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 438
F D LQ L ++L Y Y R T ++S+V P YAHLAA
Sbjct: 186 FTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAA 296
>gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 650
Score = 128 bits (274), Expect = 6e-029
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -1 / +3
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y
Sbjct: 27 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 206
Query: 503 VYQRSTTAISVVAPICYAHLAA 438
Y R T ++S+V P YAHLAA
Sbjct: 207 TYARCTRSVSIVPPAYYAHLAA 272
>gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 627
Score = 127 bits (273), Expect = 9e-029
Identities = 48/81 (59%), Positives = 60/81 (74%)
Frame = -1 / +2
Query: 671 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 492
GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D +Q L ++L Y Y R
Sbjct: 5 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYAR 184
Query: 491 STTAISVVAPICYAHLAAAQV 429
T ++SVV P YAHLAA +V
Sbjct: 185 CTRSVSVVPPAYYAHLAAFRV 247
>gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB34DPA12 3', mRNA sequence
Length = 646
Score = 127 bits (273), Expect = 9e-029
Identities = 48/85 (56%), Positives = 60/85 (70%)
Frame = -1 / -2
Query: 692 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 513
K N+ G VVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D +Q L ++
Sbjct: 618 KSGNILPGAVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNN 439
Query: 512 LSYVYQRSTTAISVVAPICYAHLAA 438
L Y Y R T ++SVV P YAHLAA
Sbjct: 438 LCYTYARCTRSVSVVPPAYYAHLAA 364
>gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 679
Score = 126 bits (269), Expect = 3e-028
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = -1 / +2
Query: 671 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 492
GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R
Sbjct: 26 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYAR 205
Query: 491 STTAISVVAPICYAHLAA 438
T ++S+V P YAHLAA
Sbjct: 206 CTRSVSIVPPAYYAHLAA 259
>gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 666
Score = 126 bits (269), Expect = 3e-028
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = -1 / +2
Query: 671 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 492
GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R
Sbjct: 26 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYAR 205
Query: 491 STTAISVVAPICYAHLAA 438
T ++S+V P YAHLAA
Sbjct: 206 CTRSVSIVPPAYYAHLAA 259
>gb|DT488774.1|DT488774 WS02537.B21_G04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_G04 3', mRNA sequence
Length = 635
Score = 126 bits (269), Expect = 3e-028
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = +1 / +3
Query: 292 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
AQQKN+EL TFSC G+ TGT PAEV PPWL+EVS++SSNF+N P AARWA*Q+GAT
Sbjct: 402 AQQKNIELQTFSCNLGNCGTGTAPAEVTPPWLEEVSEVSSNFINWPI*VAARWA*QIGAT 581
Query: 472 TDMAVVLLWY 501
T+MAVVLLWY
Sbjct: 582 TEMAVVLLWY 611
Score = 122 bits (260), Expect = 5e-027
Identities = 52/78 (66%), Positives = 59/78 (75%)
Frame = -1 / -2
Query: 524 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQ 345
LVHSLSYVYQRSTTAISVVAPICYAHLAA Q+GQF+KF++ +VPV
Sbjct: 634 LVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVP 455
Query: 344 ELPRLHEKVRSSMFFC*A 291
+LPRL EKV +SMFFC*A
Sbjct: 454 QLPRLQEKVCNSMFFC*A 401
>gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P29 5', mRNA sequence
Length = 475
Score = 116 bits (249), Expect = 2e-025
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = -1 / +1
Query: 683 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 504
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D +Q L ++L Y
Sbjct: 211 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLWY 390
Query: 503 VYQRSTTAISVVAPICY 453
Y R T ++SVV P Y
Sbjct: 391 TYARCTRSVSVVPPAYY 441
>gb|DN484863.1|DN484863 K029P19.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K029P19 3', mRNA sequence
Length = 573
Score = 114 bits (244), Expect = 9e-025
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = +1 / +1
Query: 292 AQQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGAT 471
AQQKNMEL TFSC G+ TGT PA+V PPWL+EVSD+SSNF+N P AARWA*Q+GAT
Sbjct: 340 AQQKNMELQTFSCNLGNCGTGTAPADVTPPWLEEVSDVSSNFINWPI*VAARWA*QIGAT 519
Query: 472 TDMAV 486
T+MAV
Sbjct: 520 TEMAV 534
Score = 92.7 bits (196), Expect(2) = 4e-022
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1 / -2
Query: 497 QRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXSVPVQELPRLHEKV 318
+ + TAISVVAPICYAHLAA Q+GQF+KF++ +VPV +LPRL EKV
Sbjct: 545 KEAPTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRLQEKV 366
Query: 317 RSSMFFC*A 291
+SMFFC*A
Sbjct: 365 CNSMFFC*A 339
Score = 32.7 bits (65), Expect(2) = 4e-022
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1 / -1
Query: 524 LVHSLSYVYQRST 486
LVHSLSYVYQRST
Sbjct: 573 LVHSLSYVYQRST 535
>gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_A17
3', mRNA sequence
Length = 709
Score = 114 bits (243), Expect = 1e-024
Identities = 42/72 (58%), Positives = 52/72 (72%)
Frame = -1 / +3
Query: 653 KVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAIS 474
K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R T ++S
Sbjct: 3 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVS 182
Query: 473 VVAPICYAHLAA 438
+V P YAHLAA
Sbjct: 183 IVPPAYYAHLAA 218
>gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 494
Score = 112 bits (239), Expect = 4e-024
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = -1 / +3
Query: 656 NKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAI 477
+K+CHP F+FY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R T ++
Sbjct: 3 SKICHPTEFNFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSV 182
Query: 476 SVVAPICYAHLAA 438
S+V P YAHLAA
Sbjct: 183 SIVPPAYYAHLAA 221
>gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A063P66 5', mRNA sequence
Length = 546
Score = 100 bits (212), Expect(2) = 3e-023
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = -1 / +1
Query: 632 FDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICY 453
FDFY+CSHAG+ GT+RP HYH+L DE F D LQ L ++L Y Y R T ++S+V P Y
Sbjct: 55 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYY 234
Query: 452 AHLAA 438
AHLAA
Sbjct: 235 AHLAA 249
Score = 29.0 bits (57), Expect(2) = 3e-023
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1 / +2
Query: 683 NVPAGTVVDNKVCHPRN 633
N+ GTVVD+K+CH N
Sbjct: 5 NILPGTVVDSKICHLLN 55
>gb|CK103023.1|CK103023 G100P25.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G100P25 5', mRNA sequence
Length = 463
Score = 62.9 bits (131), Expect(3) = 2e-021
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -1 / +2
Query: 1028 REWPLISKYRASVRTQSPKMEMIDSLFKPRETDDD 924
R+WPLIS+YRA VRTQSPK+EMIDSLFK +D
Sbjct: 245 RQWPLISRYRACVRTQSPKLEMIDSLFKRVSETED 349
Score = 42.8 bits (87), Expect(3) = 2e-021
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -1 / +3
Query: 896 FYTSSGKRKPDQVIIFRDGVS 834
F +SGKRKPDQ+IIFRDGVS
Sbjct: 381 FM*TSGKRKPDQIIIFRDGVS 443
Score = 35.0 bits (70), Expect(3) = 2e-021
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 938 ETDDDGLIRECLIDFYTSSGKRK 870
ET+D+G+IRE L+DFY K++
Sbjct: 338 ETEDEGIIRELLLDFYVDFRKKE 406
>gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B024P66 5', mRNA sequence
Length = 276
Score = 95.9 bits (203), Expect(2) = 4e-021
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = -1 / +3
Query: 722 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 543
N H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 66 NDHRDRTAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 245
Query: 542 PDDLQELVHS 513
D LQ L ++
Sbjct: 246 ADGLQSLTNN 275
Score = 25.8 bits (50), Expect(2) = 4e-021
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 743 TLIIAQKNHHTKFF 702
T ++ QK HHT+ F
Sbjct: 21 TFVVVQKRHHTRLF 62
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 565,322,740
Number of Sequences: 369679
Number of extensions: 8448033
Number of successful extensions: 48214
Number of sequences better than 1.0e-020: 54
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 14704019805
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)