TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404800.2.1
(1228 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT503659.1|DT503659 WS0137.BR_G07 PTxD-IL-FL-A-4 Populus... 167 4e-059
gb|DT503437.1|DT503437 WS0136.BR_J20 PTxD-IL-FL-A-4 Populus... 167 8e-059
gb|DT476355.1|DT476355 WS01229.B21_E11 PT-GT-FL-A-3 Populus... 167 7e-058
gb|CV280707.1|CV280707 WS0137.B21_G07 PTxD-IL-FL-A-4 Populu... 167 2e-057
gb|CV280517.1|CV280517 WS0136.B21_J20 PTxD-IL-FL-A-4 Populu... 167 2e-057
gb|CK096481.1|CK096481 UB15CPH11.3pR Populus active cambium... 167 3e-057
gb|DV465820.1|DV465820 MTUNUL1.P43.E12 NUL Populus fremonti... 156 2e-055
gb|DT504273.1|DT504273 WS01312.B21_L07 PTxD-IL-FL-A-4 Popul... 155 6e-054
gb|DT502488.1|DT502488 WS0133.BR_C08 PTxD-IL-FL-A-4 Populus... 139 2e-050
gb|CV225757.1|CV225757 WS0162.B21_E24 PT-DX-A-7 Populus tri... 161 3e-050
gb|DT493173.1|DT493173 WS02553.C21_J21 PT-MB-N-A-15 Populus... 149 4e-048
gb|DN488662.1|DN488662 S021B06.3pR Populus imbibed seed cDN... 117 1e-046
gb|CV235235.1|CV235235 WS01218.B21_E23 PT-GT-FL-A-3 Populus... 125 2e-045
gb|DN490332.1|DN490332 UK116TF06.3pR Populus apical shoot c... 137 1e-043
gb|CA932779.1|CA932779 MTU5CS.P17.C10 Aspen stem cDNA Libra... 120 3e-043
gb|DT505641.1|DT505641 WS01811.C21_H13 PTxD-IL-N-A-9 Populu... 135 5e-043
gb|AJ772970.1|AJ772970 AJ772970 Populus euphratica leaf 3-6... 90 1e-042
gb|CN523142.1|CN523142 GQ015M01.B3_G24 GQ015 Populus tricho... 161 2e-040
gb|CV239394.1|CV239394 WS0232.B21_E06 PT-MB-A-13 Populus tr... 118 5e-039
gb|DT489174.1|DT489174 WS02538.B21_H23 PT-MB-N-A-15 Populus... 118 5e-039
gb|CV234439.1|CV234439 WS01214.B21_O21 PT-GT-FL-A-3 Populus... 118 5e-039
gb|CV240212.1|CV240212 WS0234.B21_M02 PT-MB-A-13 Populus tr... 117 1e-038
gb|CA933451.1|CA933451 MTU5CS.P8.C02 Aspen stem cDNA Librar... 92 6e-035
gb|CA932285.1|CA932285 MTU5CS.P11.A06 Aspen stem cDNA Libra... 92 6e-035
gb|CK319361.1|CK319361 X9P09h04 Populus stem seasonal libra... 90 9e-035
gb|CV234783.1|CV234783 WS01216.B21_E17 PT-GT-FL-A-3 Populus... 90 9e-035
gb|DT501087.1|DT501087 WS0131.BR_H01 PTxD-IL-FL-A-4 Populus... 86 1e-034
gb|CK099728.1|CK099728 A082P19.5pR Hybrid aspen plasmid lib... 142 4e-033
gb|DT484406.1|DT484406 WS02525.B21_F04 PT-MB-N-A-15 Populus... 121 5e-033
gb|CV130497.1|CV130497 X9P05a03 Populus stem seasonal libra... 81 9e-033
gb|DT502528.1|DT502528 WS0133.BR_E20 PTxD-IL-FL-A-4 Populus... 116 2e-032
emb|AJ698925.1| Populus deltoides x Populus maximowiczii pa... 79 8e-032
gb|AJ771700.1|AJ771700 AJ771700 Populus euphratica root 3-6... 135 5e-031
gb|CX659487.1|CX659487 PO01031C05 Poplar SC cDNA library Po... 107 8e-031
gb|CX659497.1|CX659497 PO01031D04 Poplar SC cDNA library Po... 107 8e-031
gb|CX659511.1|CX659511 PO01031E10 Poplar SC cDNA library Po... 107 8e-031
gb|DN493841.1|DN493841 I015P49.5pR Populus senescing leaves... 87 2e-030
gb|CA823897.1|CA823897 R33B03 two-month-old roots from clon... 83 6e-030
gb|CV244738.1|CV244738 WS0255.B21_H18 PT-MB-N-A-15 Populus ... 115 2e-029
gb|DT509905.1|DT509905 WS02425.BR_A24 PTxD-ICC-N-A-14 Popul... 115 2e-029
gb|DT515034.1|DT515034 WS02426.B21_H09 PTxD-ICC-N-A-14 Popu... 115 2e-029
gb|CA929389.1|CA929389 MTU2CA.P13.B01 Aspen apex cDNA Libra... 82 2e-029
emb|X62096.1|PTLBCA P. tremuloides mRNA for lignin bispecif... 116 2e-029
gb|M73431.1|POPOME Populus x generosa tissue-type leaf O-me... 116 2e-029
emb|A26484.1| Poplar pPLC4 116 2e-029
gb|AF237777.1|AF237777 Populus tomentosa caffeic acid O-3-m... 116 3e-029
gb|CV227518.1|CV227518 WS0167.B21_G15 PT-DX-A-7 Populus tri... 116 3e-029
gb|CN524481.1|CN524481 GQ015M13.T3_B02 GQ015 Populus tricho... 116 3e-029
gb|CF234075.1|CF234075 PtaJXO2C3C0305 Poplar cDNA library f... 116 3e-029
gb|BU815201.1|BU815201 N038E07 Populus bark cDNA library Po... 116 3e-029
gb|DT511606.1|DT511606 WS02416.B21_O19 PTxD-ICC-N-A-14 Popu... 116 3e-029
gb|DV466436.1|DV466436 MTUNUL1.P50.F03 NUL Populus fremonti... 116 3e-029
gb|CK319284.1|CK319284 X9P09a07 Populus stem seasonal libra... 116 6e-029
emb|A26486.1| Poplar pOMT1.A/pOMT1.B combined sequence 114 9e-029
gb|DV465073.1|DV465073 MTUNUL1.P34.F07 NUL Populus fremonti... 114 1e-028
gb|CK319339.1|CK319339 X9P09f06 Populus stem seasonal libra... 116 2e-028
gb|CV231042.1|CV231042 WS0193.B21_G01 PT-DX-N-A-10 Populus ... 116 3e-028
gb|DT484752.1|DT484752 WS02526.B21_F05 PT-MB-N-A-15 Populus... 116 3e-028
gb|CK319196.1|CK319196 X9P08a02 Populus stem seasonal libra... 112 4e-028
gb|CK319115.1|CK319115 X9P07a12 Populus stem seasonal libra... 110 1e-027
gb|DT510407.1|DT510407 WS02426.BR_H09 PTxD-ICC-N-A-14 Popul... 116 2e-027
gb|DT514525.1|DT514525 WS02425.B21_A24 PTxD-ICC-N-A-14 Popu... 115 3e-027
gb|DN484751.1|DN484751 K015P23.3pR Populus apical shoot cDN... 65 6e-027
gb|CK088971.1|CK088971 A082P19.3pR Hybrid aspen plasmid lib... 60 6e-027
gb|CV266856.1|CV266856 WS02030.B21_C15 PTxN-IB-N-A-11 Popul... 115 1e-026
gb|AI165359.1|AI165359 A082p19u Hybrid aspen plasmid librar... 97 3e-026
gb|DN494226.1|DN494226 K015P23.5pR Populus apical shoot cDN... 69 5e-026
gb|CX659723.1|CX659723 PO01013C03 Poplar SC cDNA library Po... 118 6e-026
gb|BU878639.1|BU878639 V049F12 Populus flower cDNA library ... 117 1e-025
gb|DN502084.1|DN502084 V049F12.5pR Populus male catkins cDN... 117 1e-025
gb|DT524561.1|DT524561 WS02042.C21.1_P23 PTxN-IB-N-A-11 Pop... 117 1e-025
gb|BU870693.1|BU870693 Q017C04 Populus flower cDNA library ... 87 1e-025
gb|CX186439.1|CX186439 A04_45-18_02.ab1 leaf inoculated wit... 84 2e-025
gb|CV261308.1|CV261308 WS02016.B21_G21 PTxN-IB-N-A-11 Popul... 116 2e-025
gb|CV265340.1|CV265340 WS02026.B21_P18 PTxN-IB-N-A-11 Popul... 116 2e-025
gb|CV272694.1|CV272694 WS0158.B21_G20 PTxN-IB-A-6 Populus t... 116 2e-025
gb|CV246992.1|CV246992 WS01116.B21_K20 PT-P-FL-A-2 Populus ... 111 2e-025
gb|DV465156.1|DV465156 MTUNUL1.P35.G02 NUL Populus fremonti... 84 2e-025
gb|BU811664.1|BU811664 UL87T2E09 Populus leaf cDNA library ... 116 3e-025
gb|CK318925.1|CK318925 X9P04h05 Populus stem seasonal libra... 116 3e-025
gb|CV237447.1|CV237447 WS01227.B21_B24 PT-GT-FL-A-3 Populus... 116 3e-025
gb|DT471890.1|DT471890 WS0122.BR_G17 PT-GT-FL-A-3 Populus t... 99 3e-025
gb|CA823580.1|CA823580 R28D11 two-month-old roots from clon... 99 3e-025
gb|CA930181.1|CA930181 MTU2CA.P8.C04 Aspen apex cDNA Librar... 115 5e-025
gb|BU892964.1|BU892964 P071F08 Populus petioles cDNA librar... 84 8e-025
gb|CV225407.1|CV225407 WS0161.B21_E21 PT-DX-A-7 Populus tri... 114 1e-024
gb|CK319716.1|CK319716 B9SP10h05 Populus stem seasonal libr... 100 1e-024
gb|DT497587.1|DT497587 WS01126.BR_O15 PT-P-FL-A-2 Populus t... 98 1e-024
gb|CF232044.1|CF232044 PtaJXO0005H11H1115 Poplar cDNA libra... 113 2e-024
gb|AI165702.1|AI165702 A088p24u Hybrid aspen plasmid librar... 113 3e-024
gb|CA823709.1|CA823709 R30B06 two-month-old roots from clon... 111 7e-024
gb|BU872046.1|BU872046 Q038E02 Populus flower cDNA library ... 103 1e-023
gb|CV242812.1|CV242812 WS02516.B21.1_B15 PT-MB-N-A-15 Popul... 67 1e-023
gb|AJ774023.1|AJ774023 AJ774023 Populus euphratica shoot 3-... 110 2e-023
gb|DN492141.1|DN492141 V049F12.3pR Populus male catkins cDN... 109 3e-023
gb|CA826354.1|CA826354 R76H06 two-month-old roots from clon... 84 4e-022
gb|CF232528.1|CF232528 PtaJXO0011E8E0810 Poplar cDNA librar... 105 8e-022
gb|CX655994.1|CX655994 PO02044D01 Poplar SC cDNA library Po... 105 8e-022
gb|DN498369.1|DN498369 S021B06.5pR Populus imbibed seed cDN... 89 1e-021
gb|CA929878.1|CA929878 MTU2CA.P4.A02 Aspen apex cDNA Librar... 61 2e-021
gb|CX282540.1|CX282540 15.4.2 Populus tremula X Populus alb... 103 3e-021
gb|CA824107.1|CA824107 R36F01 two-month-old roots from clon... 75 3e-021
gb|DV465876.1|DV465876 MTUNUL1.P44.C10 NUL Populus fremonti... 90 4e-021
gb|CA929918.1|CA929918 MTU2CA.P4.E01 Aspen apex cDNA Librar... 61 5e-021
gb|CF232697.1|CF232697 PtaJXO0014F7F0711 Poplar cDNA librar... 101 7e-021
gb|CK319108.1|CK319108 X9P07a02 Populus stem seasonal libra... 101 7e-021
gb|CV229588.1|CV229588 WS01913.B21_M20 PT-DX-N-A-10 Populus... 101 7e-021
>gb|DT503659.1|DT503659 WS0137.BR_G07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_G07 5', mRNA sequence
Length = 905
Score = 167 bits (360), Expect(3) = 4e-059
Identities = 63/145 (43%), Positives = 90/145 (62%)
Frame = -1 / +3
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ D T F + H W+ P L N+ M DS +VV +C +F G+SSLV
Sbjct: 429 QNDDRTAFSVAHEKAPWEYVGQDPRINNLCNEVMARDSILACKLVVNKCKGIFEGVSSLV 608
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV I+ AFPH+ C+VLDLPHV ++ ++K++AGDMF+++PPA+A+ LK
Sbjct: 609 DVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLK 788
Query: 475 WVLHDWGDADCIKILKNCKKAIPSR 401
W+LH+W D DC+KILK CK+AI S+
Sbjct: 789 WILHNWSDEDCVKILKRCKQAIMSK 863
Score = 84.0 bits (177), Expect(3) = 4e-059
Identities = 37/73 (50%), Positives = 45/73 (61%)
Frame = -1 / +3
Query: 1222 LLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLR 1043
LL AQ +W+ F FI SM LK AV LGI D I HG TL ++VS +HPSK +
Sbjct: 51 LLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHGKPMTLSELVSALPIHPSKAQYVH 230
Query: 1042 RLMRVLTAAGIFS 1004
RLMR+L +G FS
Sbjct: 231 RLMRILVHSGFFS 269
Score = 21.7 bits (41), Expect(3) = 4e-059
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / +3
Query: 391 GKVIIVDMV 365
GKVII+DMV
Sbjct: 879 GKVIIIDMV 905
>gb|DT503437.1|DT503437 WS0136.BR_J20 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_J20 5', mRNA sequence
Length = 864
Score = 167 bits (360), Expect(2) = 8e-059
Identities = 63/145 (43%), Positives = 90/145 (62%)
Frame = -1 / +3
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ D T F + H W+ P L N+ M DS +VV +C +F G+SSLV
Sbjct: 426 QNDDRTAFSVAHEKAPWEYVGQDPRINNLCNEVMARDSILACKLVVNKCKGIFEGVSSLV 605
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV I+ AFPH+ C+VLDLPHV ++ ++K++AGDMF+++PPA+A+ LK
Sbjct: 606 DVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLK 785
Query: 475 WVLHDWGDADCIKILKNCKKAIPSR 401
W+LH+W D DC+KILK CK+AI S+
Sbjct: 786 WILHNWSDEDCVKILKRCKQAIMSK 860
Score = 84.0 bits (177), Expect(2) = 8e-059
Identities = 37/73 (50%), Positives = 45/73 (61%)
Frame = -1 / +3
Query: 1222 LLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLR 1043
LL AQ +W+ F FI SM LK AV LGI D I HG TL ++VS +HPSK +
Sbjct: 48 LLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHGKPMTLSELVSALPIHPSKAQYVH 227
Query: 1042 RLMRVLTAAGIFS 1004
RLMR+L +G FS
Sbjct: 228 RLMRILVHSGFFS 266
>gb|DT476355.1|DT476355 WS01229.B21_E11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_E11 3', mRNA sequence
Length = 887
Score = 167 bits (360), Expect(3) = 7e-058
Identities = 64/142 (45%), Positives = 89/142 (62%)
Frame = -1 / -2
Query: 826 DPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVX 647
D T F + H W+ P L N+ M DS +VV +C +F G+SSLVDV
Sbjct: 883 DRTAFSVAHEKAPWEYVGQDPRINNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVG 704
Query: 646 XXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVL 467
I+ AFPH+ C+VLDLPHV ++ ++KY+AGDMF+++PPA+A+ LKW+L
Sbjct: 703 GGIGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKYVAGDMFQAVPPAEAILLKWML 524
Query: 466 HDWGDADCIKILKNCKKAIPSR 401
H+W D DC+KILK CK+AI S+
Sbjct: 523 HNWSDEDCVKILKRCKQAIMSK 458
Score = 62.0 bits (129), Expect(3) = 7e-058
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = -1 / -2
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ + G ER+E EW K+ +AGF +YKI PVLG R++IE+YP*
Sbjct: 352 MVVVGGMERNEKEWAKLFFDAGFLNYKIHPVLGTRALIELYP* 224
Score = 34.1 bits (68), Expect(3) = 7e-058
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1 / -2
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTING 287
GKVII+DMV + + ETQ+ FDL +M + G
Sbjct: 442 GKVIIIDMVRENLNGDEGSIETQLFFDLQMMVVVG 338
>gb|CV280707.1|CV280707 WS0137.B21_G07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_G07 3', mRNA sequence
Length = 919
Score = 167 bits (360), Expect(3) = 2e-057
Identities = 63/145 (43%), Positives = 90/145 (62%)
Frame = -1 / -2
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ D T F + H W+ P L N+ M DS +VV +C +F G+SSLV
Sbjct: 825 QNDDRTAFSVAHEKAPWEYVGQDPRINNLCNEVMARDSILACKLVVNKCKGIFEGVSSLV 646
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV I+ AFPH+ C+VLDLPHV ++ ++K++AGDMF+++PPA+A+ LK
Sbjct: 645 DVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLK 466
Query: 475 WVLHDWGDADCIKILKNCKKAIPSR 401
W+LH+W D DC+KILK CK+AI S+
Sbjct: 465 WILHNWSDEDCVKILKRCKQAIMSK 391
Score = 60.2 bits (125), Expect(3) = 2e-057
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = -1 / -2
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ G ER+E EW K+ +AGF +YKI PVLG R++IE+YP*
Sbjct: 285 MVVAGGMERNEKEWAKLFFDAGFLNYKIYPVLGPRALIELYP* 157
Score = 34.5 bits (69), Expect(3) = 2e-057
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1 / -2
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTING 287
GKVII+DMV + + ETQ+ FDL +M + G
Sbjct: 375 GKVIIIDMVRENLNGDEGSIETQLFFDLQMMVVAG 271
>gb|CV280517.1|CV280517 WS0136.B21_J20 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_J20 3', mRNA sequence
Length = 893
Score = 167 bits (360), Expect(3) = 2e-057
Identities = 63/145 (43%), Positives = 90/145 (62%)
Frame = -1 / -2
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ D T F + H W+ P L N+ M DS +VV +C +F G+SSLV
Sbjct: 817 QNDDRTAFSVAHEKAPWEYVGQDPRINNLCNEVMARDSILACKLVVNKCKGIFEGVSSLV 638
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV I+ AFPH+ C+VLDLPHV ++ ++K++AGDMF+++PPA+A+ LK
Sbjct: 637 DVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLK 458
Query: 475 WVLHDWGDADCIKILKNCKKAIPSR 401
W+LH+W D DC+KILK CK+AI S+
Sbjct: 457 WILHNWSDEDCVKILKRCKQAIMSK 383
Score = 60.2 bits (125), Expect(3) = 2e-057
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = -1 / -2
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ G ER+E EW K+ +AGF +YKI PVLG R++IE+YP*
Sbjct: 277 MVVAGGMERNEKEWAKLFFDAGFLNYKIYPVLGPRALIELYP* 149
Score = 34.5 bits (69), Expect(3) = 2e-057
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1 / -2
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTING 287
GKVII+DMV + + ETQ+ FDL +M + G
Sbjct: 367 GKVIIIDMVRENLNGDEGSIETQLFFDLQMMVVAG 263
>gb|CK096481.1|CK096481 UB15CPH11.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB15CPH11 3', mRNA sequence
Length = 882
Score = 167 bits (360), Expect(3) = 3e-057
Identities = 62/145 (42%), Positives = 88/145 (60%)
Frame = -1 / -2
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ D F + H T W+ P LFN+ M DS +V+ +C +F G+SSLV
Sbjct: 851 QNDDRIAFTVAHEKTPWEYIGQDPRLNNLFNEAMARDSILASKLVLFKCKGIFEGVSSLV 672
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV I+ AFPH+ C+V DLPHV ++ ++KY+ GDMF+ +PPA+A+ LK
Sbjct: 671 DVGGGLGTMAKGIAEAFPHMDCTVFDLPHVVSDLQGCKNLKYVGGDMFQGVPPAEAILLK 492
Query: 475 WVLHDWGDADCIKILKNCKKAIPSR 401
W+LHDW D DC+KILK C++AI S+
Sbjct: 491 WILHDWSDEDCVKILKRCRQAIMSK 417
Score = 57.4 bits (119), Expect(3) = 3e-057
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -1 / -2
Query: 292 NGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
+G ER+E EW K+ +AGF +YKI PVL R++IE+YP*
Sbjct: 299 DGMERNEKEWAKLFFDAGFLNYKIHPVLATRALIELYP* 183
Score = 36.8 bits (74), Expect(3) = 3e-057
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1 / -2
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIM 299
GKVII+DMV+ + + ETQ+LFDL +M
Sbjct: 401 GKVIIIDMVIENLNGDEGSIETQLLFDLHMM 309
>gb|DV465820.1|DV465820 MTUNUL1.P43.E12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 850
Score = 156 bits (335), Expect(2) = 2e-055
Identities = 59/136 (43%), Positives = 83/136 (61%)
Frame = -1 / +1
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ D T F + H W+ P L N+ M DS +VV +C +F G+SSLV
Sbjct: 439 QNDDRTAFSVAHEKAPWEYVGQDPRINNLCNEVMARDSILACKLVVNKCKGIFEGVSSLV 618
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV I+ AFPH+ C+VLDLPHV ++ ++KY+AGDMF+++PPA+A+ LK
Sbjct: 619 DVGGGIGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKYVAGDMFQAVPPAEAILLK 798
Query: 475 WVLHDWGDADCIKILK 428
W+LH+W D DC+KILK
Sbjct: 799 WMLHNWSDEDCVKILK 846
Score = 84.0 bits (177), Expect(2) = 2e-055
Identities = 37/73 (50%), Positives = 45/73 (61%)
Frame = -1 / +1
Query: 1222 LLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLR 1043
LL AQ +W+ F FI SM LK AV LGI D I HG TL ++VS +HPSK +
Sbjct: 61 LLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHGKPMTLSELVSALPIHPSKAQYVH 240
Query: 1042 RLMRVLTAAGIFS 1004
RLMR+L +G FS
Sbjct: 241 RLMRILVHSGFFS 279
>gb|DT504273.1|DT504273 WS01312.B21_L07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_L07 3', mRNA sequence
Length = 822
Score = 155 bits (334), Expect(3) = 6e-054
Identities = 59/136 (43%), Positives = 85/136 (62%)
Frame = -1 / -1
Query: 808 MTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXX 629
+ H W+ P L N+ M DS +VV +C +F G+SSLVDV
Sbjct: 819 VAHEKAPWEYVGQDPRINNLCNEVMARDSILACKLVVNKCKGIFEGVSSLVDVGGGLGTM 640
Query: 628 XXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDA 449
I+ AFP + C+VLDLPHV ++ ++K++AGDMF+++PPA+A+ LKW+LH+W D
Sbjct: 639 AKGITEAFPPMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLKWILHNWSDE 460
Query: 448 DCIKILKNCKKAIPSR 401
DC+KILK CK+AI S+
Sbjct: 459 DCVKILKRCKQAIMSK 412
Score = 60.2 bits (125), Expect(3) = 6e-054
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = -1 / -1
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ G ER+E EW K+ +AGF +YKI PVLG R++IE+YP*
Sbjct: 306 MVVAGGMERNEKEWAKLFFDAGFLNYKIYPVLGPRALIELYP* 178
Score = 34.5 bits (69), Expect(3) = 6e-054
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1 / -1
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTING 287
GKVII+DMV + + ETQ+ FDL +M + G
Sbjct: 396 GKVIIIDMVRENLNGDEGSIETQLFFDLQMMVVAG 292
>gb|DT502488.1|DT502488 WS0133.BR_C08 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0133_C08 5', mRNA sequence
Length = 812
Score = 139 bits (298), Expect(2) = 2e-050
Identities = 52/128 (40%), Positives = 76/128 (59%)
Frame = -1 / +3
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ D T F + H W+ P L N+ M DS +VV +C +F G+SSLV
Sbjct: 429 QNDDRTAFSVAHEKAPWEYVGQDPRINNLCNEVMARDSILACKLVVNKCKGIFEGVSSLV 608
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV I+ AFPH+ C+VLDLPHV ++ ++K++AGDMF+++PPA+A+ LK
Sbjct: 609 DVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKFVAGDMFQAVPPAEAILLK 788
Query: 475 WVLHDWGD 452
W+LH+W D
Sbjct: 789 WILHNWSD 812
Score = 84.0 bits (177), Expect(2) = 2e-050
Identities = 37/73 (50%), Positives = 45/73 (61%)
Frame = -1 / +3
Query: 1222 LLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLR 1043
LL AQ +W+ F FI SM LK AV LGI D I HG TL ++VS +HPSK +
Sbjct: 51 LLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHGKPMTLSELVSALPIHPSKAQYVH 230
Query: 1042 RLMRVLTAAGIFS 1004
RLMR+L +G FS
Sbjct: 231 RLMRILVHSGFFS 269
>gb|CV225757.1|CV225757 WS0162.B21_E24 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_E24
3', mRNA sequence
Length = 920
Score = 161 bits (347), Expect(3) = 3e-050
Identities = 61/138 (44%), Positives = 82/138 (59%)
Frame = -1 / +3
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXX 635
F+ HG WDL P F +FN + C + +M VV F + +LVDV
Sbjct: 282 FKKAHGCEIWDLASQNPEFNRIFNDALACTAKIIMRAVVSHYKGGFDDVETLVDVGGGTG 461
Query: 634 XXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWG 455
I A+PH++ DLPHV A APA V ++ G+ FE+IP AD++F+KWVLHDWG
Sbjct: 462 GNLAEIVKAYPHIKGINFDLPHVVAAAPAYNGVSHVGGNFFEAIPNADSIFMKWVLHDWG 641
Query: 454 DADCIKILKNCKKAIPSR 401
D DC+KILKNC+KA+P +
Sbjct: 642 DEDCVKILKNCRKAMPEK 695
Score = 51.5 bits (106), Expect(3) = 3e-050
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -1 / +3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVY 182
+F + G ER E EWKK++ E GF YKII + + SIIE Y
Sbjct: 783 MFAHSTGGKERTELEWKKLLEEGGFPRYKIINIPALPSIIEAY 911
Score = 24.9 bits (48), Expect(3) = 3e-050
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1 / +3
Query: 976 GGELVYGLTPASQLLVGGS 920
GGE +YGLT +S+ L+ S
Sbjct: 126 GGETLYGLTDSSKWLLRDS 182
>gb|DT493173.1|DT493173 WS02553.C21_J21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_J21 3', mRNA sequence
Length = 822
Score = 149 bits (320), Expect(2) = 4e-048
Identities = 57/134 (42%), Positives = 78/134 (58%)
Frame = -1 / -1
Query: 802 HGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXX 623
HG WD P +FN+ M C S+ M ++ D F + SLVDV
Sbjct: 816 HGCELWDFASRNPEVNRIFNEAMACTSNITMRAILSHYKDGFNNIRSLVDVAGGIGGHVA 637
Query: 622 AISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADC 443
I A+PH++ DLPHV A AP V ++AG+MFE+IP ADA+F++ +LHDW D C
Sbjct: 636 EIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEAIPNADAIFIQRILHDWTDESC 457
Query: 442 IKILKNCKKAIPSR 401
++IL+NCKKAIP +
Sbjct: 456 VEILRNCKKAIPEK 415
Score = 63.4 bits (132), Expect(2) = 4e-048
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -1 / -1
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP 179
+F +T G ER E EWKK++ E GFS YKII + + SIIE YP
Sbjct: 324 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 193
>gb|DN488662.1|DN488662 S021B06.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S021B06 3', mRNA sequence
Length = 568
Score = 117 bits (250), Expect(3) = 1e-046
Identities = 41/77 (53%), Positives = 55/77 (71%)
Frame = -1 / -3
Query: 607 FPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILK 428
F H+ C+V DLPHV A + ++KY+ GDMFE+IP ADA+ LKW+LHDW + +C+KILK
Sbjct: 512 FQHLDCTVFDLPHVVAGLEGSENLKYLGGDMFEAIPQADAILLKWILHDWNEEECVKILK 333
Query: 427 NCKKAIPSRDAGGKVII 377
CK+ I R G +II
Sbjct: 332 QCKEEIKGRGGGKVIII 282
Score = 69.8 bits (146), Expect(3) = 1e-046
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = -1 / -3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
L ++ + G ER+E EW K+ ++AGFS YKI PVLG+RS+IEVYP*
Sbjct: 215 LMMILVTGKERNEKEWAKLFTDAGFSHYKINPVLGLRSLIEVYP* 81
Score = 39.1 bits (79), Expect(3) = 1e-046
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 394 GGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTI 293
GGKVII+DMVV ETQ+ FD+ +M +
Sbjct: 302 GGKVIIIDMVVENNKEEEGSTETQLFFDMLMMIL 201
>gb|CV235235.1|CV235235 WS01218.B21_E23 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01218_E23 3', mRNA sequence
Length = 714
Score = 125 bits (268), Expect(3) = 2e-045
Identities = 47/89 (52%), Positives = 64/89 (71%)
Frame = -1 / -1
Query: 667 SSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADA 488
SSLVDV I+ AFP + C+VLDLPHV + ++KY+AGDMF+++PPA+A
Sbjct: 714 SSLVDVGGGIGTMAKGITEAFPTMDCTVLDLPHVVFDLQGCKNLKYVAGDMFQAVPPAEA 535
Query: 487 VFLKWVLHDWGDADCIKILKNCKKAIPSR 401
+ LKW+LH+W D DC+KILK CK+AI S+
Sbjct: 534 ILLKWMLHNWSDEDCVKILKRCKQAIMSK 448
Score = 62.0 bits (129), Expect(3) = 2e-045
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = -1 / -1
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ + G ER+E EW K+ +AGF +YKI PVLG R++IE+YP*
Sbjct: 342 MVVVGGMERNEKEWAKLFFDAGFLNYKIHPVLGTRALIELYP* 214
Score = 34.1 bits (68), Expect(3) = 2e-045
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1 / -1
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTING 287
GKVII+DMV + + ETQ+ FDL +M + G
Sbjct: 432 GKVIIIDMVRENLNGDEGSIETQLFFDLQMMVVVG 328
>gb|DN490332.1|DN490332 UK116TF06.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone UK116TF06 3', mRNA
sequence
Length = 805
Score = 137 bits (294), Expect(2) = 1e-043
Identities = 53/117 (45%), Positives = 74/117 (63%)
Frame = -1 / -3
Query: 751 LFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLP 572
+FN+ M C + VM ++ D F + SLVDV I A+PH++ LDLP
Sbjct: 803 IFNEAMACTTKIVMTAILSHYEDGFNNIRSLVDVAGGIGRNVAEIVRAYPHIKGINLDLP 624
Query: 571 HVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSR 401
HV A AP V ++AG+MF++IP ADA+F+K +LHDW D C++IL+NCKKAIP +
Sbjct: 623 HVVATAPKYEGVSHVAGNMFDAIPNADAIFMKRILHDWTDESCVEILRNCKKAIPEK 453
Score = 60.2 bits (125), Expect(2) = 1e-043
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = -1 / -3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP 179
+F +T G ER E EWKK++ + GF+ YKII + + SIIE YP
Sbjct: 362 MFAVTTGGKERTEQEWKKLLEDGGFARYKIIKIPALESIIEAYP 231
>gb|CA932779.1|CA932779 MTU5CS.P17.C10 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 624
Score = 120 bits (256), Expect(3) = 3e-043
Identities = 40/70 (57%), Positives = 56/70 (80%)
Frame = -1 / -1
Query: 610 AFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKIL 431
AFPH+ C+V +LPHV ++ ++KY+AGDMF+ +PPA+A+ LKW+LHDW D DC+KIL
Sbjct: 624 AFPHMDCTVFELPHVVSDLQGCKNLKYVAGDMFQGVPPAEAILLKWMLHDWSDEDCVKIL 445
Query: 430 KNCKKAIPSR 401
K CK+AI S+
Sbjct: 444 KRCKQAITSK 415
Score = 57.9 bits (120), Expect(3) = 3e-043
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = -1 / -1
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ +G ER+E EW K+ +AGF +YKI PVL R++IE+YP*
Sbjct: 309 MVAASGMERNEEEWAKLFFDAGFLNYKIHPVLDTRALIELYP* 181
Score = 36.3 bits (73), Expect(3) = 3e-043
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIM 299
GKVII+DMV Q+ + ETQ+LFDL +M
Sbjct: 399 GKVIIIDMVRENQNGDEGSIETQLLFDLEMM 307
>gb|DT505641.1|DT505641 WS01811.C21_H13 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01811_H13 3', mRNA sequence
Length = 876
Score = 135 bits (290), Expect(3) = 5e-043
Identities = 55/136 (40%), Positives = 75/136 (55%)
Frame = -1 / -3
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXX 635
FE +G W PAF L N M CD+ + +++ C +F GL +LVDV
Sbjct: 769 FEAAYGGDIWKYAAANPAFNRLINDAMACDARLAVSAIIESCPKLFDGLKTLVDVGGGNG 590
Query: 634 XXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWG 455
AFP ++ DLPHV + A VK + GDMF+S+P ADAV++ VL DW
Sbjct: 589 TALGKFVKAFPWIEGINFDLPHVVSVAAECEGVKQVGGDMFDSVPKADAVYIMKVLQDWN 410
Query: 454 DADCIKILKNCKKAIP 407
+ DC++ILK CK+AIP
Sbjct: 409 NDDCVRILKKCKEAIP 362
Score = 56.1 bits (116), Expect(3) = 5e-043
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = -1 / -3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP*LFGEY 161
+ T +G ER EW ++ EAGFS Y IIP+ V+S+IE +P* ++
Sbjct: 268 MMAFTNSGKERTSEEWDCVLKEAGFSSYNIIPIRAVQSVIEAFP*FTKQF 119
Score = 22.1 bits (42), Expect(3) = 5e-043
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 391 GKVIIVDMVVGGQSSN 344
GKVIIV+ V+G + +
Sbjct: 352 GKVIIVETVIGEEKQD 305
>gb|AJ772970.1|AJ772970 AJ772970 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000200003B11F1, mRNA sequence
Length = 597
Score = 90.4 bits (191), Expect(4) = 1e-042
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = -1 / +2
Query: 541 SVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSR 401
++KY+ GDMFE++PPAD + LKW LHDW D DC+KILK CK AI S+
Sbjct: 281 NLKYVGGDMFEAVPPADVILLKWTLHDWNDEDCVKILKQCKHAIMSK 421
Score = 82.2 bits (173), Expect(4) = 1e-042
Identities = 33/91 (36%), Positives = 46/91 (50%)
Frame = -1 / +2
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXX 635
F + H T W+ P LFN+ M DS +VV +C +F G++SLVDV
Sbjct: 5 FSVAHERTLWEYAGQDPRLSNLFNEAMASDSILASKLVVSKCQGIFEGVNSLVDVGGGSG 184
Query: 634 XXXXAISTAFPHVQCSVLDLPHVAANAPANT 542
I+ AFPH+ C+V DLP V + A +
Sbjct: 185 TMAKGIAEAFPHMDCTVFDLPRVVFDLQAGS 277
Score = 33.6 bits (67), Expect(4) = 1e-042
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1 / +2
Query: 304 IMTINGAERDEHEWKKIISEAGF 236
++T+ G ER+E EW K+ +AGF
Sbjct: 524 MVTVTGLERNEMEWAKLFFDAGF 592
Score = 24.4 bits (47), Expect(4) = 1e-042
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1 / +2
Query: 391 GKVIIVDMVVGGQSSN 344
GKVII+D+V G Q+ +
Sbjct: 437 GKVIIIDIVRGSQNGD 484
>gb|CN523142.1|CN523142 GQ015M01.B3_G24 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_G24 5', mRNA sequence
Length = 728
Score = 161 bits (347), Expect(2) = 2e-040
Identities = 61/138 (44%), Positives = 82/138 (59%)
Frame = -1 / +1
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXX 635
F+ HG WDL P F +FN + C + +M VV F + +LVDV
Sbjct: 184 FKKAHGCEIWDLASQNPEFNRIFNDALACTAKIIMRAVVSHYKGGFDDVETLVDVGGGTG 363
Query: 634 XXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWG 455
I A+PH++ DLPHV A APA V ++ G+ FE+IP AD++F+KWVLHDWG
Sbjct: 364 GNLAEIVKAYPHIKGINFDLPHVVAAAPAYNGVSHVGGNFFEAIPNADSIFMKWVLHDWG 543
Query: 454 DADCIKILKNCKKAIPSR 401
D DC+KILKNC+KA+P +
Sbjct: 544 DEDCVKILKNCRKAMPEK 597
Score = 24.9 bits (48), Expect(2) = 2e-040
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1 / +1
Query: 976 GGELVYGLTPASQLLVGGS 920
GGE +YGLT +S+ L+ S
Sbjct: 28 GGETLYGLTDSSKWLLRDS 84
>gb|CV239394.1|CV239394 WS0232.B21_E06 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_E06
3', mRNA sequence
Length = 709
Score = 118 bits (253), Expect(2) = 5e-039
Identities = 46/95 (48%), Positives = 62/95 (65%)
Frame = -1 / -3
Query: 685 DVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFES 506
D F + SLVDV I A+PH++ DLPHV A AP V ++AG+MFE+
Sbjct: 707 DGFNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEA 528
Query: 505 IPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSR 401
IP ADA+F++ +LHDW D C++IL+NCKKAIP +
Sbjct: 527 IPNADAIFIQRILHDWTDESCVEILRNCKKAIPEK 423
Score = 63.4 bits (132), Expect(2) = 5e-039
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -1 / -3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP 179
+F +T G ER E EWKK++ E GFS YKII + + SIIE YP
Sbjct: 332 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 201
>gb|DT489174.1|DT489174 WS02538.B21_H23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02538_H23 3', mRNA sequence
Length = 707
Score = 118 bits (253), Expect(2) = 5e-039
Identities = 46/95 (48%), Positives = 62/95 (65%)
Frame = -1 / -3
Query: 685 DVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFES 506
D F + SLVDV I A+PH++ DLPHV A AP V ++AG+MFE+
Sbjct: 705 DGFNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEA 526
Query: 505 IPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSR 401
IP ADA+F++ +LHDW D C++IL+NCKKAIP +
Sbjct: 525 IPNADAIFMQRILHDWTDESCVEILRNCKKAIPEK 421
Score = 63.4 bits (132), Expect(2) = 5e-039
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -1 / -3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP 179
+F +T G ER E EWKK++ E GFS YKII + + SIIE YP
Sbjct: 330 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 199
>gb|CV234439.1|CV234439 WS01214.B21_O21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01214_O21 3', mRNA sequence
Length = 702
Score = 118 bits (253), Expect(2) = 5e-039
Identities = 46/95 (48%), Positives = 62/95 (65%)
Frame = -1 / -3
Query: 685 DVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFES 506
D F + SLVDV I A+PH++ DLPHV A AP V ++AG+MFE+
Sbjct: 700 DGFNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEA 521
Query: 505 IPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSR 401
IP ADA+F++ +LHDW D C++IL+NCKKAIP +
Sbjct: 520 IPNADAIFMQRILHDWTDESCVEILRNCKKAIPEK 416
Score = 63.4 bits (132), Expect(2) = 5e-039
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -1 / -3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP 179
+F +T G ER E EWKK++ E GFS YKII + + SIIE YP
Sbjct: 325 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 194
>gb|CV240212.1|CV240212 WS0234.B21_M02 PT-MB-A-13 Populus trichocarpa cDNA clone WS0234_M02
3', mRNA sequence
Length = 673
Score = 117 bits (250), Expect(2) = 1e-038
Identities = 46/96 (47%), Positives = 62/96 (64%)
Frame = -1 / -2
Query: 685 DVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFES 506
D F + SLVDV I A+PH++ DLPHV A AP V ++AG+MFE+
Sbjct: 669 DGFNNIRSLVDVAGGIGGHVAEIVRAYPHIEGINFDLPHVVATAPKYEGVSHVAGNMFEA 490
Query: 505 IPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRD 398
IP ADA+F++ +LHDW D C +IL+NCKKAIP ++
Sbjct: 489 IPNADAIFIQRILHDWTDESCAEILRNCKKAIPEKN 382
Score = 63.4 bits (132), Expect(2) = 1e-038
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -1 / -3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP 179
+F +T G ER E EWKK++ E GFS YKII + + SIIE YP
Sbjct: 293 MFALTTGGKERTEQEWKKLLEEGGFSRYKIIKIPALESIIEAYP 162
>gb|CA933451.1|CA933451 MTU5CS.P8.C02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 614
Score = 92.3 bits (195), Expect(3) = 6e-035
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = -1 / -3
Query: 541 SVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSR 401
++KY+AGDMF+ +PPA+A+ LKW+LHDW D DC+KILK CK+AI S+
Sbjct: 555 NLKYVAGDMFQGVPPAEAILLKWMLHDWSDEDCVKILKRCKQAITSK 415
Score = 57.9 bits (120), Expect(3) = 6e-035
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = -1 / -3
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ +G ER+E EW K+ +AGF +YKI PVL R++IE+YP*
Sbjct: 309 MVAASGMERNEEEWAKLFFDAGFLNYKIHPVLDTRALIELYP* 181
Score = 36.3 bits (73), Expect(3) = 6e-035
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / -3
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIM 299
GKVII+DMV Q+ + ETQ+LFDL +M
Sbjct: 399 GKVIIIDMVRENQNGDEGSIETQLLFDLEMM 307
>gb|CA932285.1|CA932285 MTU5CS.P11.A06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 560
Score = 92.3 bits (195), Expect(3) = 6e-035
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = -1 / -3
Query: 541 SVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSR 401
++KY+AGDMF+ +PPA+A+ LKW+LHDW D DC+KILK CK+AI S+
Sbjct: 555 NLKYVAGDMFQGVPPAEAILLKWMLHDWSDEDCVKILKRCKQAITSK 415
Score = 57.9 bits (120), Expect(3) = 6e-035
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = -1 / -3
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ +G ER+E EW K+ +AGF +YKI PVL R++IE+YP*
Sbjct: 309 MVAASGMERNEEEWAKLFFDAGFLNYKIHPVLDTRALIELYP* 181
Score = 36.3 bits (73), Expect(3) = 6e-035
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / -3
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIM 299
GKVII+DMV Q+ + ETQ+LFDL +M
Sbjct: 399 GKVIIIDMVRENQNGDEGSIETQLLFDLEMM 307
>gb|CK319361.1|CK319361 X9P09h04 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 775
Score = 90.0 bits (190), Expect(3) = 9e-035
Identities = 37/105 (35%), Positives = 52/105 (49%)
Frame = -1 / +3
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXX 635
++ HG WDL P F +FN + C + +M VV F + +LVDV
Sbjct: 456 YKKAHGCEIWDLASQNPEFNRIFNDALACTAKIIMRAVVSHYKGGFDDVETLVDVGGGTG 635
Query: 634 XXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
I A+PH++ DLPHV A APA V ++ G+ FE+IP
Sbjct: 636 GNLAEIVKAYPHIKGINXDLPHVVAAAPAYNGVSHVGGNXFEAIP 770
Score = 71.2 bits (149), Expect(3) = 9e-035
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = -1 / +3
Query: 1228 QALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPC 1049
+ LL Q+E+W F F +SMALK A++LGIAD I+S GG TL QI S IP
Sbjct: 57 ETLLRGQVEVWQLMFGFAESMALKCAIELGIADIINSLGGPVTLNQIASGIDSPCVDIPY 236
Query: 1048 LRRLMRVLTAAGIFS 1004
L R+MR L F+
Sbjct: 237 LARIMRFLVRKRAFT 281
Score = 24.9 bits (48), Expect(3) = 9e-035
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1 / +3
Query: 976 GGELVYGLTPASQLLVGGS 920
GGE +YGLT +S+ L+ S
Sbjct: 300 GGETLYGLTDSSKWLLRDS 356
>gb|CV234783.1|CV234783 WS01216.B21_E17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01216_E17 3', mRNA sequence
Length = 633
Score = 90.0 bits (190), Expect(3) = 9e-035
Identities = 29/47 (61%), Positives = 42/47 (89%)
Frame = -1 / -1
Query: 541 SVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSR 401
++KY+AGDMF+++PPA+A+ LKW+LH+W D DC+KILK CK+AI S+
Sbjct: 588 NLKYVAGDMFQAVPPAEAILLKWMLHNWSDEDCVKILKRCKQAIMSK 448
Score = 62.0 bits (129), Expect(3) = 9e-035
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = -1 / -1
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ + G ER+E EW K+ +AGF +YKI PVLG R++IE+YP*
Sbjct: 342 MVVVGGMERNEKEWAKLFFDAGFLNYKIHPVLGTRALIELYP* 214
Score = 34.1 bits (68), Expect(3) = 9e-035
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1 / -1
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTING 287
GKVII+DMV + + ETQ+ FDL +M + G
Sbjct: 432 GKVIIIDMVRENLNGDEGSIETQLFFDLQMMVVVG 328
>gb|DT501087.1|DT501087 WS0131.BR_H01 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0131_H01 5', mRNA sequence
Length = 736
Score = 86.3 bits (182), Expect(2) = 1e-034
Identities = 36/102 (35%), Positives = 52/102 (50%)
Frame = -1 / +3
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ D T F + H W+ P L N+ M DS +VV +C +F G+SSLV
Sbjct: 429 QNDDRTAFSVAHEKAPWEYVGQDPRINNLCNEVMARDSILACKLVVNKCKGIFEGVSSLV 608
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKY 530
DV I+ AFPH+ C+VLDLPHV ++ ++K+
Sbjct: 609 DVGGGLGTMAKGITEAFPHMDCTVLDLPHVVSDLQGCKNLKF 734
Score = 84.0 bits (177), Expect(2) = 1e-034
Identities = 37/73 (50%), Positives = 45/73 (61%)
Frame = -1 / +3
Query: 1222 LLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLR 1043
LL AQ +W+ F FI SM LK AV LGI D I HG TL ++VS +HPSK +
Sbjct: 51 LLQAQTHVWNHIFYFINSMTLKCAVQLGIPDVIQKHGKPMTLSELVSALPIHPSKAQYVH 230
Query: 1042 RLMRVLTAAGIFS 1004
RLMR+L +G FS
Sbjct: 231 RLMRILVHSGFFS 269
>gb|CK099728.1|CK099728 A082P19.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A082P19 5', mRNA sequence
Length = 374
Score = 142 bits (305), Expect = 4e-033
Identities = 53/113 (46%), Positives = 73/113 (64%)
Frame = -1 / +1
Query: 766 PAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCS 587
P LFN+ M DS +V+ +C +F G+SSLVDV I+ AFPH+ C+
Sbjct: 31 PRLNNLFNEAMARDSILASKLVLFKCKGIFEGVSSLVDVGGGLGTMAKGIAEAFPHMDCT 210
Query: 586 VLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILK 428
V DLP+V ++ ++KY+ GDMF+ +PPA+A+ LKWVLHDW D DC+KILK
Sbjct: 211 VFDLPNVVSDLQGCKNLKYVGGDMFQGVPPAEAILLKWVLHDWSDEDCVKILK 369
>gb|DT484406.1|DT484406 WS02525.B21_F04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_F04 3', mRNA sequence
Length = 734
Score = 121 bits (258), Expect(2) = 5e-033
Identities = 45/120 (37%), Positives = 67/120 (55%)
Frame = -1 / -3
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ + T F + H T W+ P LFN+ M DS +V+ +C +F G+ SLV
Sbjct: 468 QNDEATAFSVAHERTLWEYAGQDPRLSNLFNEAMASDSILASKLVLNQCKGIFDGVDSLV 289
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV I+ AFPH+ C+V DLP V ++ + ++KY+ GDMFE++PPAD + LK
Sbjct: 288 DVGGGSGTMAKGIAEAFPHMDCTVFDLPRVVSDLQGSKNLKYVGGDMFEAVPPADVILLK 109
Score = 44.1 bits (90), Expect(2) = 5e-033
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -1 / -3
Query: 1117 HGGNATLPQIVSRAALHPSKIPCLRRLMRVLTAAGIFS 1004
HG TL ++VS +HPSK + RLMR+L +G FS
Sbjct: 729 HGKPMTLSELVSALPIHPSKAQYVHRLMRILVHSGFFS 616
>gb|CV130497.1|CV130497 X9P05a03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 803
Score = 80.8 bits (170), Expect(3) = 9e-033
Identities = 34/99 (34%), Positives = 47/99 (47%)
Frame = -1 / +3
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXX 635
F+ HG WDL P F +FN + C + +M VV F + +LVDV
Sbjct: 504 FKKAHGCEIWDLASQNPEFNRIFNDALACTAKIIMRAVVSHYKGGFDVVETLVDVGGGTG 683
Query: 634 XXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGD 518
I A+PH++ DLPHV A APA V ++ G+
Sbjct: 684 GNLAEIVKAYPHIRGINFDLPHVVAAAPAYNGVSHVGGN 800
Score = 73.5 bits (154), Expect(3) = 9e-033
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = -1 / +3
Query: 1228 QALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPC 1049
+ LL Q+E+W F F +SMALK A++LGIAD I+S GG TL QI S IP
Sbjct: 105 ETLLRGQVEVWQLMFGFAESMALKCAIELGIADIINSLGGPVTLNQIASGIDSPCVDIPS 284
Query: 1048 LRRLMRVLTAAGIFS 1004
L R+MR L +F+
Sbjct: 285 LARIMRFLVRKRVFT 329
Score = 24.9 bits (48), Expect(3) = 9e-033
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1 / +3
Query: 976 GGELVYGLTPASQLLVGGS 920
GGE +YGLT +S+ L+ S
Sbjct: 348 GGETLYGLTDSSKWLLRDS 404
>gb|DT502528.1|DT502528 WS0133.BR_E20 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0133_E20 5', mRNA sequence
Length = 844
Score = 116 bits (247), Expect(2) = 2e-032
Identities = 49/121 (40%), Positives = 65/121 (53%)
Frame = -1 / +1
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXX 635
FE HG W P +L + M CD+ V+ +V+ +VF G+ +LVDV
Sbjct: 481 FEGAHGDDIWKYALANPVHSKLIDDAMACDAKLVVPEIVEGFPEVFDGVKTLVDVGGGNG 660
Query: 634 XXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWG 455
+ AFP +Q DLPHV + A + VK++ GD FES+P ADA FL WVLHDW
Sbjct: 661 TTLQMLVKAFPWIQGINFDLPHVVSVASESEGVKHVGGDFFESVPKADAAFLMWVLHDWN 840
Query: 454 D 452
D
Sbjct: 841 D 843
Score = 47.3 bits (97), Expect(2) = 2e-032
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = -1 / +1
Query: 1213 AQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLRRLM 1034
A++E+W F F +K A++LGIADAI ++ G +L ++ S PS + + R +
Sbjct: 106 AKVEIWKYIFGFTNMAVVKCAIELGIADAIENNEGPMSLSELSSSLGCAPSSLYRIMRFL 285
>emb|AJ698925.1| Populus deltoides x Populus maximowiczii partial mRNA for putative
O-methyltransferase
Length = 453
Score = 78.5 bits (165), Expect(3) = 8e-032
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -1 / +1
Query: 526 AGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPS 404
AGDMF+++PPA+A+ LK +LHDW D DC+KILK CK+AI S
Sbjct: 1 AGDMFQAVPPAEAILLKCILHDWSDEDCVKILKRCKQAIMS 123
Score = 60.2 bits (125), Expect(3) = 8e-032
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = -1 / +1
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP*LFGEYVFRFFL 143
++ ++G ER+E EW K+ ++GF +YKI PV G R++IE+YP* +F F L
Sbjct: 232 MVVVSGVERNEKEWAKLFFDSGFLNYKIHPVPGTRAVIELYP**DLNILFSFVL 393
Score = 37.3 bits (75), Expect(3) = 8e-032
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -1 / +1
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTI 293
GKVII+DMV Q+ + ETQ++FDL +M +
Sbjct: 142 GKVIIIDMVRENQNGDEGSIETQLIFDLAMMVV 240
>gb|AJ771700.1|AJ771700 AJ771700 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600004F04F1, mRNA sequence
Length = 632
Score = 135 bits (290), Expect = 5e-031
Identities = 55/136 (40%), Positives = 75/136 (55%)
Frame = -1 / +3
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXX 635
FE +G W PAF L N M CD+ + +++ C +F GL +LVDV
Sbjct: 69 FEAAYGGDIWKYAAANPAFNRLINDAMACDARLAVSAIIESCPKLFDGLKTLVDVGGGNG 248
Query: 634 XXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWG 455
AFP ++ DLPHV + A VK + GDMF+S+P ADAVF+ VL DW
Sbjct: 249 TALGKFVKAFPWIEGINFDLPHVVSVAAECEGVKQVGGDMFDSVPKADAVFIMKVLQDWN 428
Query: 454 DADCIKILKNCKKAIP 407
+ DC++IL+ CK+AIP
Sbjct: 429 NDDCVRILRKCKEAIP 476
>gb|CX659487.1|CX659487 PO01031C05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031C05 5', mRNA sequence
Length = 621
Score = 107 bits (229), Expect(2) = 8e-031
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = -1 / +3
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV + AFP +Q DLPHV + AP + V+++ GD F+S+P ADA FL
Sbjct: 3 DVGGGNGTTLQMLVKAFPCIQGINFDLPHVVSAAPESEGVQHVGGDFFQSVPKADAAFLM 182
Query: 475 WVLHDWGDADCIKILKNCKKAIPS 404
WVLHDW D +CI+ILKNCK+AI S
Sbjct: 183 WVLHDWNDEECIQILKNCKEAIQS 254
Score = 46.9 bits (96), Expect(2) = 8e-031
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -1 / +3
Query: 400 DAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKI 221
D G +I+ +V + ++ + + T G ER EW+ ++ EAGFS Y I
Sbjct: 255 DKGKVIIVEAVVGEEKGDKLEFVRLMLDMVMMSHTDAGKERTSKEWEYVLKEAGFSSYTI 434
Query: 220 IPVLGVRSIIEVYP* 176
P+ V+S+I P*
Sbjct: 435 KPIRAVQSVIVASP* 479
>gb|CX659497.1|CX659497 PO01031D04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031D04 5', mRNA sequence
Length = 621
Score = 107 bits (229), Expect(2) = 8e-031
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = -1 / +3
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV + AFP +Q DLPHV + AP + V+++ GD F+S+P ADA FL
Sbjct: 3 DVGGGNGTTLQMLVKAFPCIQGINFDLPHVVSAAPESEGVQHVGGDFFQSVPKADAAFLM 182
Query: 475 WVLHDWGDADCIKILKNCKKAIPS 404
WVLHDW D +CI+ILKNCK+AI S
Sbjct: 183 WVLHDWNDEECIQILKNCKEAIQS 254
Score = 46.9 bits (96), Expect(2) = 8e-031
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -1 / +3
Query: 400 DAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKI 221
D G +I+ +V + ++ + + T G ER EW+ ++ EAGFS Y I
Sbjct: 255 DKGKVIIVEAVVGEEKGDKLEFVRLMLDMVMMSHTDAGKERTSKEWEYVLKEAGFSSYTI 434
Query: 220 IPVLGVRSIIEVYP* 176
P+ V+S+I P*
Sbjct: 435 KPIRAVQSVIVASP* 479
>gb|CX659511.1|CX659511 PO01031E10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031E10 5', mRNA sequence
Length = 621
Score = 107 bits (229), Expect(2) = 8e-031
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = -1 / +3
Query: 655 DVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLK 476
DV + AFP +Q DLPHV + AP + V+++ GD F+S+P ADA FL
Sbjct: 3 DVGGGNGTTLQMLVKAFPCIQGINFDLPHVVSAAPESEGVQHVGGDFFQSVPKADAAFLM 182
Query: 475 WVLHDWGDADCIKILKNCKKAIPS 404
WVLHDW D +CI+ILKNCK+AI S
Sbjct: 183 WVLHDWNDEECIQILKNCKEAIQS 254
Score = 46.9 bits (96), Expect(2) = 8e-031
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -1 / +3
Query: 400 DAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKI 221
D G +I+ +V + ++ + + T G ER EW+ ++ EAGFS Y I
Sbjct: 255 DKGKVIIVEAVVGEEKGDKLEFVRLMLDMVMMSHTDAGKERTSKEWEYVLKEAGFSSYTI 434
Query: 220 IPVLGVRSIIEVYP* 176
P+ V+S+I P*
Sbjct: 435 KPIRAVQSVIVASP* 479
>gb|DN493841.1|DN493841 I015P49.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I015P49 5', mRNA sequence
Length = 770
Score = 87.2 bits (184), Expect(4) = 2e-030
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = -1 / +1
Query: 1222 LLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLR 1043
LL AQ +W+ F+FI SMALK AV LGI D I HG TL ++VS +HPSK +
Sbjct: 76 LLQAQTHVWNHIFSFINSMALKCAVQLGIPDVIQKHGKPMTLSELVSALPIHPSKAQYVH 255
Query: 1042 RLMRVLTAAGIFS 1004
RLMR+L +G FS
Sbjct: 256 RLMRILVHSGFFS 294
Score = 57.0 bits (118), Expect(4) = 2e-030
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -1 / +1
Query: 835 ERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLV 656
+ + T F + H T W+ P LFN+ M DS +VV +C +F G+ S+V
Sbjct: 442 QNDEATAFSVAHERTLWEYAGQDPRLSNLFNEAMASDSMLASKLVVSKCKGIFEGVDSMV 621
Query: 655 DV 650
DV
Sbjct: 622 DV 627
Score = 29.0 bits (57), Expect(4) = 2e-030
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1 / +2
Query: 619 ISTAFPHVQCSVLDLP 572
I+ FPH+ C+V DLP
Sbjct: 662 IAKTFPHMDCTVFDLP 709
Score = 21.7 bits (41), Expect(4) = 2e-030
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1 / +3
Query: 574 PHVAANAPANTSVKYIAGDMF 512
P ++ + ++KY+ GDMF
Sbjct: 708 PVGVSDLQGSKNLKYVGGDMF 770
>gb|CA823897.1|CA823897 R33B03 two-month-old roots from clone 'Beaupre' Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 626
Score = 83.1 bits (175), Expect(3) = 6e-030
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -1 / +3
Query: 1201 LWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLRRLMRVLT 1022
+W+ F FI SM+LK A+DLGI D I+ H TLP++++ +HPSK C+ RLMR+L
Sbjct: 114 VWNHIFNFINSMSLKCAIDLGIPDIINKHSKPVTLPELIAALPVHPSKARCVPRLMRLLI 293
Query: 1021 AAGIFSAAHRSPDD 980
+G F S DD
Sbjct: 294 HSGFFEKQKVSEDD 335
Score = 54.7 bits (113), Expect(3) = 6e-030
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -1 / +3
Query: 826 DPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDV 680
DPT F+ HG T WD H+P FN M D+ V + V EC +V
Sbjct: 480 DPTPFDTAHGRTFWDYGSHEPMLNHXFNDAMASDARXVTRVXVNECKEV 626
Score = 31.8 bits (63), Expect(3) = 6e-030
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1 / +3
Query: 937 LLVGGSSSLAPFMSLVLHQVYVSPFLGLGTWLQHERSDP 821
LL S+ PF+ +LH + P+ + TWL ++ P
Sbjct: 375 LLKDNPFSVTPFLQAMLHPILTKPWHFVSTWLTNDDPTP 491
>gb|CV244738.1|CV244738 WS0255.B21_H18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0255_H18 3', mRNA sequence
Length = 908
Score = 115 bits (246), Expect(3) = 2e-029
Identities = 43/91 (47%), Positives = 60/91 (65%)
Frame = -1 / -3
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F+ L LV++ AI + +P ++ DLPHV +AP+ V+++ GDMFES+P
Sbjct: 645 FKNLKQLVEIGGGMGHTIKAIISKYPQIKGINFDLPHVIEHAPSCPGVEHVGGDMFESVP 466
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
DA+FLKW+LHDW D C+K+LKNC KAIP
Sbjct: 465 KGDAIFLKWILHDWSDDHCLKLLKNCYKAIP 373
Score = 27.2 bits (53), Expect(3) = 2e-029
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1 / -3
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMD 707
F+ HG A++ P F ++FN M ++ V++
Sbjct: 777 FDRVHGAHAFEYPGLDPRFNQVFNTAMYNQTTVVLE 670
Score = 25.4 bits (49), Expect(3) = 2e-029
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1 / -3
Query: 289 GAERDEHEWKKIISEAGFSDYK 224
G ER EHE+ + + AGF K
Sbjct: 258 GKERTEHEFMALATGAGFRGIK 193
>gb|DT509905.1|DT509905 WS02425.BR_A24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_A24 5', mRNA sequence
Length = 901
Score = 115 bits (246), Expect(3) = 2e-029
Identities = 43/91 (47%), Positives = 60/91 (65%)
Frame = -1 / -2
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F+ L LV++ AI + +P ++ DLPHV +AP+ V+++ GDMFES+P
Sbjct: 633 FKNLKQLVEIGGGMGHTIKAIISKYPQIKGINFDLPHVIEHAPSCPGVEHVGGDMFESVP 454
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
DA+FLKW+LHDW D C+K+LKNC KAIP
Sbjct: 453 KGDAIFLKWILHDWSDDHCLKLLKNCYKAIP 361
Score = 27.2 bits (53), Expect(3) = 2e-029
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1 / -2
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMD 707
F+ HG A++ P F ++FN M ++ V++
Sbjct: 765 FDRVHGAHAFEYPGLDPRFNQVFNTAMYNQTTVVLE 658
Score = 25.4 bits (49), Expect(3) = 2e-029
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1 / -2
Query: 289 GAERDEHEWKKIISEAGFSDYK 224
G ER EHE+ + + AGF K
Sbjct: 246 GKERTEHEFMALATGAGFRGIK 181
>gb|DT515034.1|DT515034 WS02426.B21_H09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_H09 3', mRNA sequence
Length = 859
Score = 115 bits (246), Expect(3) = 2e-029
Identities = 43/91 (47%), Positives = 60/91 (65%)
Frame = -1 / -2
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F+ L LV++ AI + +P ++ DLPHV +AP+ V+++ GDMFES+P
Sbjct: 660 FKNLKQLVEIGGGMGHTIKAIISKYPQIKGINFDLPHVIEHAPSCPGVEHVGGDMFESVP 481
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
DA+FLKW+LHDW D C+K+LKNC KAIP
Sbjct: 480 KGDAIFLKWILHDWSDDHCLKLLKNCYKAIP 388
Score = 27.2 bits (53), Expect(3) = 2e-029
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1 / -2
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMD 707
F+ HG A++ P F ++FN M ++ V++
Sbjct: 792 FDRVHGAHAFEYPGLDPRFNQVFNTAMYNQTTVVLE 685
Score = 25.4 bits (49), Expect(3) = 2e-029
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1 / -2
Query: 289 GAERDEHEWKKIISEAGFSDYK 224
G ER EHE+ + + AGF K
Sbjct: 273 GKERTEHEFMALATGAGFRGIK 208
>gb|CA929389.1|CA929389 MTU2CA.P13.B01 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 685
Score = 81.7 bits (172), Expect(3) = 2e-029
Identities = 34/90 (37%), Positives = 43/90 (47%)
Frame = -1 / +1
Query: 820 TLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXX 641
T F HG WDL P +FN+ M C + VM ++ D F + SLVDV
Sbjct: 397 TAFSKAHGCELWDLASRNPEVNRIFNEAMACTTKIVMTAILSHYKDGFNNIRSLVDVAGG 576
Query: 640 XXXXXXAISTAFPHVQCSVLDLPHVAANAP 551
I A+PH++ LDLPHV A AP
Sbjct: 577 IGRNVAEIVRAYPHIKGINLDLPHVVATAP 666
Score = 60.6 bits (126), Expect(3) = 2e-029
Identities = 30/76 (39%), Positives = 43/76 (56%)
Frame = -1 / +1
Query: 1228 QALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPC 1049
+A ++ E+ S F+ +MALK AV+L +AD I+SHG +L QI S + I
Sbjct: 4 EAFFESDFEILQLSLGFVDTMALKCAVELRLADIINSHGRPISLSQIASGINSPSTDISY 183
Query: 1048 LRRLMRVLTAAGIFSA 1001
L R+MR L IF+A
Sbjct: 184 LARIMRYLVRKEIFTA 231
Score = 25.4 bits (49), Expect(3) = 2e-029
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1 / +1
Query: 988 PDDGGGELVYGLTPASQLLVGGSSSLA 908
P GGE ++GL S+LL+ S A
Sbjct: 235 PPSDGGETLFGLNQKSRLLMHDSERSA 315
>emb|X62096.1|PTLBCA P. tremuloides mRNA for lignin bispecific caffeic
acid/5-hydroxyferulic acid O-methyl transferase
Length = 1503
Score = 116 bits (248), Expect(2) = 2e-029
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -1 / +2
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F GL+SLVDV I + +P ++ DLPHV +AP+ V+++ GDMF S+P
Sbjct: 656 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 835
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
ADAVF+KW+ HDW DA C+K LKNC A+P
Sbjct: 836 KADAVFMKWICHDWSDAHCLKFLKNCYDALP 928
Score = 33.1 bits (66), Expect(2) = 2e-029
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1 / +2
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVK 695
F +G+TA++ + P F ++FN+GM S+ M +++
Sbjct: 524 FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILE 643
>gb|M73431.1|POPOME Populus x generosa tissue-type leaf O-methyltransferase mRNA,
complete cds
Length = 1375
Score = 116 bits (248), Expect(2) = 2e-029
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -1 / +2
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F GL+SLVDV I + +P ++ DLPHV +AP+ V+++ GDMF S+P
Sbjct: 647 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 826
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
ADAVF+KW+ HDW DA C+K LKNC A+P
Sbjct: 827 KADAVFMKWICHDWSDAHCLKFLKNCYDALP 919
Score = 33.1 bits (66), Expect(2) = 2e-029
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1 / +2
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVK 695
F +G+TA++ + P F ++FN+GM S+ M +++
Sbjct: 515 FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILE 634
>emb|A26484.1| Poplar pPLC4
Length = 1368
Score = 116 bits (248), Expect(2) = 2e-029
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -1 / +1
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F GL+SLVDV I + +P ++ DLPHV +AP+ V+++ GDMF S+P
Sbjct: 640 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 819
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
ADAVF+KW+ HDW DA C+K LKNC A+P
Sbjct: 820 KADAVFMKWICHDWSDAHCLKFLKNCYDALP 912
Score = 33.1 bits (66), Expect(2) = 2e-029
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1 / +1
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVK 695
F +G+TA++ + P F ++FN+GM S+ M +++
Sbjct: 508 FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILE 627
>gb|AF237777.1|AF237777 Populus tomentosa caffeic acid O-3-methyltransferase (COMT) mRNA,
partial cds
Length = 1080
Score = 116 bits (248), Expect(2) = 3e-029
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -1 / +1
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F GL+SLVDV I + +P ++ DLPHV +AP+ V+++ GDMF S+P
Sbjct: 592 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 771
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
ADAVF+KW+ HDW DA C+K LKNC A+P
Sbjct: 772 KADAVFMKWICHDWSDAHCLKFLKNCYDALP 864
Score = 33.1 bits (66), Expect(2) = 3e-029
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1 / +1
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVK 695
F +G+TA++ + P F ++FN+GM S+ M +++
Sbjct: 460 FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILE 579
>gb|CV227518.1|CV227518 WS0167.B21_G15 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_G15
3', mRNA sequence
Length = 899
Score = 116 bits (248), Expect(2) = 3e-029
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -1 / -1
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F GL+SLVDV I + +P ++ DLPHV +AP+ V+++ GDMF S+P
Sbjct: 752 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 573
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
ADAVF+KW+ HDW DA C+K LKNC A+P
Sbjct: 572 KADAVFMKWICHDWSDAHCLKFLKNCYDALP 480
Score = 33.1 bits (66), Expect(2) = 3e-029
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVK 695
F +G+TA++ + P F ++FN+GM S+ M +++
Sbjct: 884 FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILE 765
>gb|CN524481.1|CN524481 GQ015M13.T3_B02 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_B02 5', mRNA sequence
Length = 812
Score = 116 bits (248), Expect(2) = 3e-029
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -1 / +1
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F GL+SLVDV I + +P ++ DLPHV +AP+ V+++ GDMF S+P
Sbjct: 280 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 459
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
ADAVF+KW+ HDW DA C+K LKNC A+P
Sbjct: 460 KADAVFMKWICHDWSDAHCLKFLKNCYDALP 552
Score = 33.1 bits (66), Expect(2) = 3e-029
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1 / +1
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVK 695
F +G+TA++ + P F ++FN+GM S+ M +++
Sbjct: 148 FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILE 267
>gb|CF234075.1|CF234075 PtaJXO2C3C0305 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 694
Score = 116 bits (248), Expect(2) = 3e-029
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -1 / +2
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F GL+SLVDV I + +P ++ DLPHV +AP+ V+++ GDMF S+P
Sbjct: 173 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 352
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
ADAVF+KW+ HDW DA C+K LKNC A+P
Sbjct: 353 KADAVFMKWICHDWSDAHCLKFLKNCYDALP 445
Score = 33.1 bits (66), Expect(2) = 3e-029
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1 / +2
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVK 695
F +G+TA++ + P F ++FN+GM S+ M +++
Sbjct: 41 FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILE 160
>gb|BU815201.1|BU815201 N038E07 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 660
Score = 116 bits (248), Expect(2) = 3e-029
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = -1 / +1
Query: 679 FRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIP 500
F GL+SLVDV I + +P ++ DLPHV +AP+ V+++ GDMF S+P
Sbjct: 172 FEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVP 351
Query: 499 PADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
ADAVF+KW+ HDW DA C+K LKNC A+P
Sbjct: 352 KADAVFMKWICHDWSDAHCLKFLKNCYDALP 444
Score = 33.1 bits (66), Expect(2) = 3e-029
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -1 / +1
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVK 695
F +G+TA++ + P F ++FN+GM S+ M +++
Sbjct: 40 FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILE 159
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 526,595,396
Number of Sequences: 369679
Number of extensions: 6676722
Number of successful extensions: 35172
Number of sequences better than 1.0e-020: 128
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 17114514855
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)