TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404725.2.9
(1195 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT514705.1|DT514705 WS02425.B21_I20 PTxD-ICC-N-A-14 Popu... 185 3e-073
gb|DT510085.1|DT510085 WS02425.BR_I20 PTxD-ICC-N-A-14 Popul... 185 3e-073
gb|CV256643.1|CV256643 WS0244.B21_G18 PTxD-ICC-N-A-14 Popul... 185 2e-072
gb|DT517583.1|DT517583 WS02434.B21_L14 PTxD-ICC-N-A-14 Popu... 185 1e-068
gb|DT520978.1|DT520978 WS02033.B21_B04 PTxN-IB-N-A-11 Popul... 177 5e-068
gb|DT525144.1|DT525144 WS02044.C21_J01 PTxN-IB-N-A-11 Popul... 177 5e-068
gb|DN483723.1|DN483723 PSO202D09 Populus tomentiglandulosa ... 138 1e-062
gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, comple... 100 2e-062
gb|CN523502.1|CN523502 GQ015M07.T3_B08 GQ015 Populus tricho... 171 9e-062
gb|DN489317.1|DN489317 T023D01.3pR Populus shoot meristem c... 185 9e-062
gb|CX655663.1|CX655663 PO02038B07 Poplar SC cDNA library Po... 129 2e-056
gb|CF233492.1|CF233492 PtaJXO0024C2C0206 Poplar cDNA librar... 169 9e-055
gb|CV275896.1|CV275896 WS0177.B21_P21 PTxD-NR-A-8 Populus t... 193 1e-054
gb|BU832276.1|BU832276 T031F10 Populus apical shoot cDNA li... 149 5e-052
gb|DT512199.1|DT512199 WS02418.B21_K02 PTxD-ICC-N-A-14 Popu... 177 1e-051
gb|DN490449.1|DN490449 UK131TE03.3pR Populus apical shoot c... 191 1e-050
gb|DT511310.1|DT511310 WS02416.B21_B23 PTxD-ICC-N-A-14 Popu... 171 2e-050
gb|DT518220.1|DT518220 WS02436.B21_I16 PTxD-ICC-N-A-14 Popu... 171 2e-050
gb|BH860723.1|BH860723 ORNL222 Poplar BAC Library Populus t... 99 2e-049
gb|DT485142.1|DT485142 WS02527.B21_G13 PT-MB-N-A-15 Populus... 171 6e-048
gb|CF232662.1|CF232662 PtaJXO0014B9B0903 Poplar cDNA librar... 188 2e-047
gb|DT508892.1|DT508892 WS02422.BR_D15 PTxD-ICC-N-A-14 Popul... 159 8e-047
gb|BU832092.1|BU832092 T029C12 Populus apical shoot cDNA li... 177 2e-046
gb|DT513501.1|DT513501 WS02422.B21_D15 PTxD-ICC-N-A-14 Popu... 158 2e-046
gb|CX655574.1|CX655574 PO02036F11 Poplar SC cDNA library Po... 186 3e-046
gb|CV238057.1|CV238057 WS0125.B21_C06 PT-GT-FL-A-3 Populus ... 185 4e-046
gb|CF232732.1|CF232732 PtaJXO0015B7B0703 Poplar cDNA librar... 184 8e-046
gb|DT516575.1|DT516575 WS02431.B21_M23 PTxD-ICC-N-A-14 Popu... 183 1e-045
gb|DT476539.1|DT476539 WS01229.B21_P03 PT-GT-FL-A-3 Populus... 171 1e-043
gb|CK092927.1|CK092927 G100P57.3pR Populus tension wood cDN... 177 1e-043
gb|BP934231.1|BP934231 BP934231 full-length enriched poplar... 176 2e-043
gb|AJ777809.1|AJ777809 AJ777809 Populus euphratica root 3-6... 155 1e-042
gb|CV274281.1|CV274281 WS0172.B21_M11 PTxD-NR-A-8 Populus t... 155 4e-042
gb|DN492283.1|DN492283 V062A01.3pR Populus male catkins cDN... 171 1e-041
gb|CV130787.1|CV130787 B9SP10h10 Populus stem seasonal libr... 169 4e-041
gb|CB240309.1|CB240309 PopSC00287 Poplar SC cDNA library Po... 167 1e-040
gb|CA824413.1|CA824413 R41F09 two-month-old roots from clon... 155 4e-040
gb|CN519468.1|CN519468 GQ0101.B3_C19 GQ010 Populus trichoca... 107 3e-039
gb|DT487515.1|DT487515 WS02533.B21_O14 PT-MB-N-A-15 Populus... 143 1e-038
gb|DT482101.1|DT482101 WS02533.BR_O14 PT-MB-N-A-15 Populus ... 143 1e-038
gb|BU831146.1|BU831146 T017G12 Populus apical shoot cDNA li... 157 1e-037
gb|DV466382.1|DV466382 MTUNUL1.P5.H09 NUL Populus fremontii... 107 5e-036
gb|BI131350.1|BI131350 G119P62Y Populus cambium cDNA librar... 151 9e-036
gb|DT518576.1|DT518576 WS02438.B21_J08 PTxD-ICC-N-A-14 Popu... 149 4e-035
gb|CN522788.1|CN522788 GQ0122.B3_B18 GQ012 Populus trichoca... 80 7e-033
gb|AI164321.1|AI164321 A059P32U Hybrid aspen plasmid librar... 130 1e-032
gb|DN484355.1|DN484355 G130P50.3pR Populus tension wood cDN... 138 9e-032
gb|BU812401.1|BU812401 UL95TH09 Populus leaf cDNA library P... 133 2e-030
gb|CA931453.1|CA931453 MTU2TA.P7.E06 Aspen apex cDNA Librar... 133 2e-030
gb|CA930944.1|CA930944 MTU2TA.P12.F04 Aspen apex cDNA Libra... 130 1e-029
gb|BI128793.1|BI128793 G081P51Y Populus cambium cDNA librar... 75 2e-029
gb|CV268506.1|CV268506 WS0205.B21_K21 PTxN-IB-N-A-11 Populu... 125 5e-028
gb|AI164970.1|AI164970 A071P61U Hybrid aspen plasmid librar... 123 2e-027
gb|DN493752.1|DN493752 G130P50.5pR Populus tension wood cDN... 62 8e-027
gb|DN502243.1|DN502243 V062A01.5pR Populus male catkins cDN... 74 1e-026
gb|CB240520.1|CB240520 PopSC00549 Poplar SC cDNA library Po... 111 2e-026
gb|CV230926.1|CV230926 WS0193.B21_A09 PT-DX-N-A-10 Populus ... 119 3e-026
gb|BI131980.1|BI131980 G128P78Y Populus cambium cDNA librar... 116 4e-025
gb|CN520782.1|CN520782 GQ0105.B3_I03 GQ010 Populus trichoca... 60 4e-025
gb|BI132032.1|BI132032 G130P01Y Populus cambium cDNA librar... 111 7e-024
gb|CV272489.1|CV272489 WS0157.B21_M22 PTxN-IB-A-6 Populus t... 111 7e-024
gb|CX658907.1|CX658907 PO01023H01 Poplar SC cDNA library Po... 111 1e-023
gb|CA933814.1|CA933814 MTU3TS.P13.A11 Aspen stem cDNA Libra... 110 2e-023
gb|CX282655.1|CX282655 18-2.5.2 Populus tremula X Populus a... 110 2e-023
gb|CK103714.1|CK103714 G128P78.5pR Populus tension wood cDN... 109 3e-023
gb|CF230855.1|CF230855 PtaC0014B2B0204 Poplar cDNA library ... 62 1e-022
gb|CA927109.1|CA927109 MTU6CR.P5.A10 Aspen root cDNA Librar... 107 2e-022
gb|CK103730.1|CK103730 G130P01.5pR Populus tension wood cDN... 107 2e-022
gb|CV232951.1|CV232951 WS0199.B21_C22 PT-DX-N-A-10 Populus ... 86 7e-022
gb|BI070208.1|BI070208 C016P07U Populus strain T89 leaves P... 69 1e-021
gb|BU879578.1|BU879578 V062A01 Populus flower cDNA library ... 101 7e-021
>gb|DT514705.1|DT514705 WS02425.B21_I20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I20 3', mRNA sequence
Length = 853
Score = 185 bits (399), Expect(2) = 3e-073
Identities = 69/126 (54%), Positives = 93/126 (73%)
Frame = +2 / -3
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ A+FR F+E+VF+N E + + HI+GY+F+ VGM G WTPASR+ YNL D VSR T
Sbjct: 572 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 393
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
QVYP+SWTA+ + DN GMW+IR+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 392 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 213
Query: 653 CGKVVG 670
CG+ +G
Sbjct: 212 CGRAIG 195
Score = 125 bits (268), Expect(2) = 5e-043
Identities = 63/125 (50%), Positives = 75/125 (60%)
Frame = -2 / +1
Query: 669 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHD 490
P LPQRR G+ YSS D +GE T +C PRYCL+Q M H+P LS+ + AVHD
Sbjct: 196 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 375
Query: 489 LGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRN 310
LGYT +V R T S RLY LR AGVH P +PT +K P M + +FS F T S K
Sbjct: 376 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 555
Query: 309 SARMT 295
SA MT
Sbjct: 556 SAPMT 570
Score = 111 bits (236), Expect(2) = 3e-073
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = +2 / -3
Query: 5 NQCRSFRWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPE 184
NQ RS R NLTAS RPNPQGSYHYG IN+TRTIKL +V+GK+R+A N VS V +
Sbjct: 851 NQARSIRTNLTASGPRPNPQGSYHYGMINLTRTIKLESSAAQVNGKQRYAVNSVSFVPAD 672
Query: 185 TPVKLAEYF 211
TP+K+A+YF
Sbjct: 671 TPLKIADYF 645
Score = 69.8 bits (146), Expect(2) = 5e-043
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = -2 / +1
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCGLGRAALAV 34
LK SA L GVS T +T L A L LP T ++SLMV V LI P* YDPCG G LAV
Sbjct: 643 LK*SAILRGVSAGTNETLLTAYLCLPLT*AAELSSLMVLVRLIIP**YDPCGFGLGPLAV 822
Query: 33 RFQRKDLHWL 4
RF + WL
Sbjct: 823 RFVLIERAWL 852
>gb|DT510085.1|DT510085 WS02425.BR_I20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I20 5', mRNA sequence
Length = 837
Score = 185 bits (399), Expect(2) = 3e-073
Identities = 69/126 (54%), Positives = 93/126 (73%)
Frame = +2 / +3
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ A+FR F+E+VF+N E + + HI+GY+F+ VGM G WTPASR+ YNL D VSR T
Sbjct: 282 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 461
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
QVYP+SWTA+ + DN GMW+IR+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 462 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 641
Query: 653 CGKVVG 670
CG+ +G
Sbjct: 642 CGRAIG 659
Score = 125 bits (268), Expect(2) = 5e-043
Identities = 63/125 (50%), Positives = 75/125 (60%)
Frame = -2 / -3
Query: 669 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHD 490
P LPQRR G+ YSS D +GE T +C PRYCL+Q M H+P LS+ + AVHD
Sbjct: 658 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 479
Query: 489 LGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRN 310
LGYT +V R T S RLY LR AGVH P +PT +K P M + +FS F T S K
Sbjct: 478 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 299
Query: 309 SARMT 295
SA MT
Sbjct: 298 SAPMT 284
Score = 111 bits (236), Expect(2) = 3e-073
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = +2 / +3
Query: 5 NQCRSFRWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPE 184
NQ RS R NLTAS RPNPQGSYHYG IN+TRTIKL +V+GK+R+A N VS V +
Sbjct: 3 NQARSIRTNLTASGPRPNPQGSYHYGMINLTRTIKLESSAAQVNGKQRYAVNSVSFVPAD 182
Query: 185 TPVKLAEYF 211
TP+K+A+YF
Sbjct: 183 TPLKIADYF 209
Score = 69.8 bits (146), Expect(2) = 5e-043
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = -2 / -3
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCGLGRAALAV 34
LK SA L GVS T +T L A L LP T ++SLMV V LI P* YDPCG G LAV
Sbjct: 211 LK*SAILRGVSAGTNETLLTAYLCLPLT*AAELSSLMVLVRLIIP**YDPCGFGLGPLAV 32
Query: 33 RFQRKDLHWL 4
RF + WL
Sbjct: 31 RFVLIERAWL 2
>gb|CV256643.1|CV256643 WS0244.B21_G18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_G18 3', mRNA sequence
Length = 860
Score = 185 bits (399), Expect(2) = 2e-072
Identities = 69/126 (54%), Positives = 93/126 (73%)
Frame = +2 / -1
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ A+FR F+E+VF+N E + + HI+GY+F+ VGM G WTPASR+ YNL D VSR T
Sbjct: 584 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 405
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
QVYP+SWTA+ + DN GMW+IR+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 404 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 225
Query: 653 CGKVVG 670
CG+ +G
Sbjct: 224 CGRAIG 207
Score = 125 bits (268), Expect(2) = 4e-042
Identities = 63/125 (50%), Positives = 75/125 (60%)
Frame = -2 / +1
Query: 669 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHD 490
P LPQRR G+ YSS D +GE T +C PRYCL+Q M H+P LS+ + AVHD
Sbjct: 208 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 387
Query: 489 LGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRN 310
LGYT +V R T S RLY LR AGVH P +PT +K P M + +FS F T S K
Sbjct: 388 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 567
Query: 309 SARMT 295
SA MT
Sbjct: 568 SAPMT 582
Score = 108 bits (230), Expect(2) = 2e-072
Identities = 43/68 (63%), Positives = 52/68 (76%)
Frame = +2 / -1
Query: 8 QCRSFRWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPET 187
Q RS R NLTAS RPNPQGSYHYG IN+TRTIKL +V+GK+R+A N VS V +T
Sbjct: 860 QARSIRTNLTASGPRPNPQGSYHYGMINLTRTIKLESSAAQVNGKQRYAVNSVSFVPADT 681
Query: 188 PVKLAEYF 211
P+K+A+YF
Sbjct: 680 PLKIADYF 657
Score = 67.0 bits (140), Expect(2) = 4e-042
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -2 / +1
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCGLGRAALAV 34
LK SA L GVS T +T L A L LP T ++SLMV V LI P* YDPCG G LAV
Sbjct: 655 LK*SAILRGVSAGTNETLLTAYLCLPLT*AAELSSLMVLVRLIIP**YDPCGFGLGPLAV 834
Query: 33 RF 28
RF
Sbjct: 835 RF 840
>gb|DT517583.1|DT517583 WS02434.B21_L14 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02434_L14 3', mRNA sequence
Length = 829
Score = 185 bits (399), Expect(2) = 1e-068
Identities = 69/126 (54%), Positives = 93/126 (73%)
Frame = +2 / -2
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ A+FR F+E+VF+N E + + HI+GY+F+ VGM G WTPASR+ YNL D VSR T
Sbjct: 579 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 400
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
QVYP+SWTA+ + DN GMW+IR+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 399 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 220
Query: 653 CGKVVG 670
CG+ +G
Sbjct: 219 CGRAIG 202
Score = 125 bits (268), Expect(2) = 1e-040
Identities = 63/125 (50%), Positives = 75/125 (60%)
Frame = -2 / +2
Query: 669 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHD 490
P LPQRR G+ YSS D +GE T +C PRYCL+Q M H+P LS+ + AVHD
Sbjct: 203 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 382
Query: 489 LGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRN 310
LGYT +V R T S RLY LR AGVH P +PT +K P M + +FS F T S K
Sbjct: 383 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 562
Query: 309 SARMT 295
SA MT
Sbjct: 563 SAPMT 577
Score = 95.9 bits (203), Expect(2) = 1e-068
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = +2 / -2
Query: 35 TASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLAEYF 211
TAS RPNPQGSYHYG IN+TRTIKL +V+GK+R+A N VS V +TP+K+A+YF
Sbjct: 828 TASGPRPNPQGSYHYGMINLTRTIKLESSAAQVNGKQRYAVNSVSFVPADTPLKIADYF 652
Score = 62.0 bits (129), Expect(2) = 1e-040
Identities = 34/60 (56%), Positives = 37/60 (61%)
Frame = -2 / +2
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCGLGRAALAV 34
LK SA L GVS T +T L A L LP T ++SLMV V LI P* YDPCG G LAV
Sbjct: 650 LK*SAILRGVSAGTNETLLTAYLCLPLT*AAELSSLMVLVRLIIP**YDPCGFGLGPLAV 829
>gb|DT520978.1|DT520978 WS02033.B21_B04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02033_B04 3', mRNA sequence
Length = 868
Score = 177 bits (381), Expect(2) = 5e-068
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = +2 / -2
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ +R F+E+VF+N E + + H+DGY+FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 606 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 427
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 426 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 247
Query: 653 CGKVVG 670
CG+ G
Sbjct: 246 CGRASG 229
Score = 101 bits (216), Expect(2) = 5e-068
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2 / -2
Query: 23 RWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLA 202
R NLTAS RPNPQGSYHYG IN TRTI +A G+V+GK+R+ N VS + P+TP+KLA
Sbjct: 867 RTNLTASGPRPNPQGSYHYGMINTTRTIIVANSAGQVNGKQRYGVNSVSFIAPDTPMKLA 688
Query: 203 EYF 211
+YF
Sbjct: 687 DYF 679
Score = 89.5 bits (189), Expect(2) = 1e-032
Identities = 54/120 (45%), Positives = 63/120 (52%)
Frame = -2 / +2
Query: 684 GGIGSPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVII 505
G + P LPQR GM YSSLS+ T +C PRY +Q H+P LS+ I
Sbjct: 215 GLVCRPLALPQRSAFFGMGYSSLSEVESV*TRK*NC*PRY*RAQNSVLKFHIPTLSSGIY 394
Query: 504 TAVHDLGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTS 325
AV LGYT IV R T SRRLY A VH P +PT KK *PS + + S F T S
Sbjct: 395 IAVQALGYT*IVHRETPSRRLY*FLLAVVHCPPSIPTTKKL*PSRCQLCTMSSLFWNTIS 574
Score = 71.2 bits (149), Expect(2) = 1e-032
Identities = 34/61 (55%), Positives = 40/61 (65%)
Frame = -2 / +2
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCGLGRAALAV 34
LK SAS GVSG+ DT L L LP T P A+++V V+LI P*WY+PCG G LAV
Sbjct: 677 LK*SASFMGVSGAIKDTLLTPYLCLPLT*PAEFATMIVLVVLIIP*WYEPCGFGLGPLAV 856
Query: 33 R 31
R
Sbjct: 857 R 859
>gb|DT525144.1|DT525144 WS02044.C21_J01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02044_J01 3', mRNA sequence
Length = 868
Score = 177 bits (381), Expect(2) = 5e-068
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = +2 / -2
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ +R F+E+VF+N E + + H+DGY+FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 606 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 427
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 426 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 247
Query: 653 CGKVVG 670
CG+ G
Sbjct: 246 CGRASG 229
Score = 101 bits (216), Expect(2) = 5e-068
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +2 / -2
Query: 23 RWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLA 202
R NLTAS RPNPQGSYHYG IN TRTI +A G+V+GK+R+ N VS + P+TP+KLA
Sbjct: 867 RTNLTASGPRPNPQGSYHYGMINTTRTIIVANSAGQVNGKQRYGVNSVSFIAPDTPMKLA 688
Query: 203 EYF 211
+YF
Sbjct: 687 DYF 679
Score = 89.5 bits (189), Expect(2) = 1e-032
Identities = 54/120 (45%), Positives = 63/120 (52%)
Frame = -2 / +2
Query: 684 GGIGSPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVII 505
G + P LPQR GM YSSLS+ T +C PRY +Q H+P LS+ I
Sbjct: 215 GLVCRPLALPQRSAFFGMGYSSLSEVESV*TRK*NC*PRY*RAQNSVLKFHIPTLSSGIY 394
Query: 504 TAVHDLGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTS 325
AV LGYT IV R T SRRLY A VH P +PT KK *PS + + S F T S
Sbjct: 395 IAVQALGYT*IVHRETPSRRLY*FLLAVVHCPPSIPTTKKL*PSRCQLCTMSSLFWNTIS 574
Score = 71.2 bits (149), Expect(2) = 1e-032
Identities = 34/61 (55%), Positives = 40/61 (65%)
Frame = -2 / +2
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCGLGRAALAV 34
LK SAS GVSG+ DT L L LP T P A+++V V+LI P*WY+PCG G LAV
Sbjct: 677 LK*SASFMGVSGAIKDTLLTPYLCLPLT*PAEFATMIVLVVLIIP*WYEPCGFGLGPLAV 856
Query: 33 R 31
R
Sbjct: 857 R 859
>gb|DN483723.1|DN483723 PSO202D09 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 1202
Score = 138 bits (295), Expect(3) = 1e-062
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = +2 / +2
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ +R F+E+VF+N E + + H+DGY FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 551 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYCFFVVGMDGGQWTTASRNQYNLRDGVSRCT 730
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLG 574
IQVYP+ WTA+ + DN GMW++ + W RQYLG
Sbjct: 731 IQVYPKXWTAIYIPLDNVGMWNLXTEFWARQYLG 832
Score = 111 bits (236), Expect(3) = 1e-062
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = +2 / +2
Query: 5 NQCRSFRWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPE 184
NQ RS R NLTAS RPNPQGSYHYG IN TRTI +A G+V+GK+R+ N VS + P+
Sbjct: 272 NQARSIRTNLTASGPRPNPQGSYHYGMINTTRTIIVANSAGQVNGKQRYGVNSVSFIAPD 451
Query: 185 TPVKLAEYF 211
TP+KLA+YF
Sbjct: 452 TPMKLADYF 478
Score = 73.9 bits (155), Expect(3) = 8e-030
Identities = 36/70 (51%), Positives = 43/70 (61%)
Frame = -2 / -3
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCGLGRAALAV 34
LK SAS GVSG+ DT L L LP T P A+++V V+LI P*WY+PCG G LAV
Sbjct: 480 LK*SASFMGVSGAIKDTLLTPYLCLPLT*PAEFATMIVLVVLIIP*WYEPCGFGLGPLAV 301
Query: 33 RFQRKDLHWL 4
R + WL
Sbjct: 300 RLVLIERAWL 271
Score = 67.5 bits (141), Expect(3) = 8e-030
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = -2 / -3
Query: 573 PRYCLSQMLDRMLHMPALSNVIITAVHDLGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPT 394
PRY +Q H+P LS+ I AV LGYT IV R T SRRLY A VH P +PT
Sbjct: 831 PRY*RAQNSVXKFHIPTLSSGIYIAVQXLGYT*IVHRETPSRRLY*FLLAVVHCPPSIPT 652
Query: 393 AKKA*PSMWMVSMLFSGFSKTTS 325
KK *PS + + S F T S
Sbjct: 651 TKKQ*PSRCQLCTMSSLFWNTIS 583
Score = 30.9 bits (61), Expect(3) = 1e-062
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 584 YVSVISPERSLRDEYNMPETSLRCGKVVG 670
Y+ V + SLRDEY +P+ +L G+ G
Sbjct: 841 YLRVYTDSTSLRDEYPIPKXALLXGRAXG 927
Score = 27.6 bits (54), Expect(3) = 8e-030
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2 / -1
Query: 669 PTTLPQRRLVSGMLYSSLSD 610
P LPQR GM YSSLS+
Sbjct: 926 PLALPQRSAXFGMGYSSLSE 867
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence
Length = 111678
Score = 100 bits (213), Expect(4) = 2e-062
Identities = 37/66 (56%), Positives = 47/66 (71%)
Frame = +2 / -1
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
+QVYP+SWTA+ M DN GMW+IRS W RQYLG+Q Y+ V SP S RDE +P+ +L
Sbjct: 49368 MQVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALL 49189
Query: 653 CGKVVG 670
CG+ G
Sbjct: 49188 CGRARG 49171
Score = 99.1 bits (210), Expect(4) = 2e-062
Identities = 38/64 (59%), Positives = 49/64 (76%)
Frame = +2 / -2
Query: 23 RWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLA 202
RWNLTAS RPNPQGSYHYG I +RTI LA ++ K+R+A NGVS++ +TP+K+A
Sbjct: 50030 RWNLTASGPRPNPQGSYHYGLIKTSRTITLANSGPIINRKQRYAVNGVSYIPADTPLKIA 49851
Query: 203 EYFN 214
+YFN
Sbjct: 49850 DYFN 49839
Score = 51.0 bits (105), Expect(4) = 2e-062
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2 / -2
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVG 400
V+ A FR FIE+VF+N E ++ + HIDG++FF VG
Sbjct: 49763 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVG 49659
Score = 46.4 bits (95), Expect(4) = 2e-062
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2 / -3
Query: 389 FAVGMGPGKWTPASRSTYNLLDTVSRHTIQVYPR 490
+ M G+WTPASR+ YNL DTV+R T QV+ +
Sbjct: 49567 YVSSMDGGQWTPASRARYNLRDTVARCTTQVWTK 49466
>gb|CN523502.1|CN523502 GQ015M07.T3_B08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_B08 5', mRNA sequence
Length = 777
Score = 171 bits (367), Expect(2) = 9e-062
Identities = 61/125 (48%), Positives = 88/125 (70%)
Frame = +2 / +3
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ +R ++E+VF+N E + + H+DGY+FF VGM G+WT ASR YNL D V+R T
Sbjct: 246 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 425
Query: 476 QVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 655
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 426 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 605
Query: 656 GKVVG 670
G+ G
Sbjct: 606 GRASG 620
Score = 89.0 bits (188), Expect(2) = 2e-029
Identities = 51/120 (42%), Positives = 61/120 (50%)
Frame = -2 / -3
Query: 684 GGIGSPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVII 505
G + P LPQR G+ SSLS+ T +C PRY +Q H+P LS+ I
Sbjct: 634 GRVRRPLALPQRSAFFGIGNSSLSEVESV*TRK*NCCPRY*RAQNSVLKFHIPTLSSGIY 455
Query: 504 TAVHDLGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTS 325
AVH LGYT +V T SRRLY A VH P MPT KK PS + + S F T S
Sbjct: 454 IAVHALGYT*VVHLATASRRLYWSLLAVVHCPPSMPTTKKLYPSRCQLCKMSSSFWNTIS 275
Score = 87.2 bits (184), Expect(2) = 9e-062
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +2 / +3
Query: 50 RPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLAEYF 211
RPNPQGSYHYG IN TRTI +A G+V+G +R+ N VS + P+TP+K+A+YF
Sbjct: 9 RPNPQGSYHYGMINTTRTIIVANSAGQVNGNQRYGVNSVSFIAPDTPMKIADYF 170
Score = 60.6 bits (126), Expect(2) = 2e-029
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = -2 / -3
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCGLG 52
LK SA GVSG+ DT L L LP T P A+++V V+LI P*WY+PCG G
Sbjct: 172 LK*SAIFMGVSGAIKDTLLTPYL*LPLT*PAEFATMIVLVVLIIP*WYEPCGFG 11
>gb|DN489317.1|DN489317 T023D01.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T023D01 3', mRNA sequence
Length = 745
Score = 185 bits (399), Expect(2) = 9e-062
Identities = 72/125 (57%), Positives = 92/125 (73%)
Frame = +2 / -3
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ A FR FIE+VF+N E ++ + HIDG++FF VGM G+WTPASR+ YNL DTV+R T
Sbjct: 509 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVARCTT 330
Query: 476 QVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 655
QVYP+SWTA+ M DN GMW+IRS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 329 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLC 150
Query: 656 GKVVG 670
G+ G
Sbjct: 149 GRARG 135
Score = 112 bits (240), Expect(2) = 5e-030
Identities = 61/125 (48%), Positives = 73/125 (58%)
Frame = -2 / +1
Query: 669 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHD 490
P PQRR G+ SSL + +GE TL +C P+YCL+Q D M H+P LS + AVHD
Sbjct: 136 PLARPQRRAFFGIGNSSLHECAGE*TLR*NC*PKYCLAQFSDLMFHIPTLSKAM*IAVHD 315
Query: 489 LGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRN 310
LG T +V R TVS +L AGVH P +PT KK *PSM + S F KT SM R
Sbjct: 316 LG*T*VVQRATVSLKL*RALLAGVHCPPSIPTTKKE*PSMCHD*TVSSQFWKTISMNSRK 495
Query: 309 SARMT 295
A MT
Sbjct: 496 LADMT 510
Score = 72.5 bits (152), Expect(2) = 9e-062
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +2 / -3
Query: 56 NPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLAEYFN 214
NPQG YHYG I +RTI LA ++ K+R+A NGVS++ +TP+K+A+YFN
Sbjct: 743 NPQGCYHYGLIKTSRTITLANCGPIINRKQRYAVNGVSYIPADTPLKIADYFN 585
Score = 39.1 bits (79), Expect(2) = 5e-030
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = -2 / +1
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCG 58
LK SA GVS +TPL A L + A ++VR++LI P*W P G
Sbjct: 586 LK*SAIFNGVSAGIYETPLTAYRCLRLIIGPQFARVIVRLVLINP*W*HPWG 741
>gb|CX655663.1|CX655663 PO02038B07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02038B07 5', mRNA sequence
Length = 576
Score = 129 bits (277), Expect(2) = 2e-056
Identities = 46/88 (52%), Positives = 65/88 (73%)
Frame = +2 / +2
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ +R F+E+VF+N E + + H+DGY+FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 311 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 490
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIW 556
IQVYP++WTA+ + DN GMW++R+ W
Sbjct: 491 IQVYPKAWTAIYIPLDNVGMWNLRTEFW 574
Score = 111 bits (236), Expect(2) = 2e-056
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = +2 / +2
Query: 5 NQCRSFRWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPE 184
NQ RS R NLTAS RPNPQGSYHYG IN TRTI +A G+V+GK+R+ N VS + P+
Sbjct: 32 NQARSIRTNLTASGPRPNPQGSYHYGMINTTRTIIVANSAGQVNGKQRYGVNSVSFIAPD 211
Query: 185 TPVKLAEYF 211
TP+KLA+YF
Sbjct: 212 TPMKLADYF 238
Score = 72.1 bits (151), Expect(2) = 8e-025
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = -2 / -1
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP*WYDPCGLGRAALAV 34
LK SAS GVSG+ +T L L LP T P A+++V V+LI P*WY+PCG G LAV
Sbjct: 240 LK*SASFMGVSGAIKETLLTPYLCLPLT*PAEFATMIVLVVLIIP*WYEPCGFGLGPLAV 61
Query: 33 RFQRKDLHWL 4
R + WL
Sbjct: 60 RLVLIERAWL 31
Score = 62.5 bits (130), Expect(2) = 8e-025
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = -2 / -1
Query: 534 HMPALSNVIITAVHDLGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSM 355
H+P LS+ I AV LGYT IV R T SRRLY A VH P +PT KK *PS +
Sbjct: 552 HIPTLSSGIYIAVQALGYT*IVHRETPSRRLY*FLLAVVHCPPSIPTTKKL*PSRCQLCT 373
Query: 354 LFSGFSKTTS 325
+ S F T S
Sbjct: 372 MSSLFWNTIS 343
>gb|CF233492.1|CF233492 PtaJXO0024C2C0206 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 757
Score = 169 bits (364), Expect(2) = 9e-055
Identities = 64/112 (57%), Positives = 83/112 (74%)
Frame = +2 / +2
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ A+FR F+E+VF+N E + + HI+GY+F+ VGM G WTPASR+ YNL D VSR T
Sbjct: 209 SVLGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 388
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEY 628
QVYP+SWTA+ + DN GMW+IR+ W RQYLG+Q Y+ V SP S RDEY
Sbjct: 389 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEY 544
Score = 109 bits (232), Expect(2) = 2e-029
Identities = 56/113 (49%), Positives = 67/113 (59%)
Frame = -2 / -2
Query: 633 MLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHDLGYTWIVCRLTV 454
M YSS D +GE T +C PRYCL+Q M H+P LS+ + AVHDLGYT +V R T
Sbjct: 549 MGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*MAVHDLGYT*VVQRETA 370
Query: 453 SRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRNSARMT 295
S RLY LR AGVH P +PT +K P M + +FS F T S K SA T
Sbjct: 369 SLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALKSAPKT 211
Score = 65.2 bits (136), Expect(2) = 9e-055
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +2 / +3
Query: 77 YGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLAEYF 211
YG IN+TRTIKL +V+GK+R+A N VS V +TP+K+A+YF
Sbjct: 3 YGMINLTRTIKLESSAAQVNGKQRYAVNSVSFVPADTPLKIADYF 137
Score = 40.9 bits (83), Expect(2) = 2e-029
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -2 / -1
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMVRVMLIWP* 76
LK SA L GVS T +T L A L LP T ++SLMV V LI P*
Sbjct: 139 LK*SAILRGVSAGTNETLLTAYLCLPLT*AAELSSLMVLVRLIIP* 2
>gb|CV275896.1|CV275896 WS0177.B21_P21 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_P21 3', mRNA sequence
Length = 878
Score = 193 bits (415), Expect(2) = 1e-054
Identities = 73/127 (57%), Positives = 94/127 (74%)
Frame = +2 / -1
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ A+FR + E+VFENPE ++ + HIDG+ FF VGM G+W+PASR +YNL DT+SR T
Sbjct: 707 SVMAADFRGYAEIVFENPEDNVQSWHIDGHNFFVVGMDGGQWSPASRLSYNLRDTISRCT 528
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
+QVYP SWTAV M DN GMW++RS W RQYLG+Q Y+ V SP S RDEY +P +L
Sbjct: 527 VQVYPESWTAVYMPLDNVGMWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPTNALL 348
Query: 653 CGKVVGL 673
CG+ GL
Sbjct: 347 CGRAAGL 327
Score = 107 bits (228), Expect(2) = 3e-025
Identities = 59/128 (46%), Positives = 71/128 (55%)
Frame = -2 / +1
Query: 678 IGSPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITA 499
+ SP PQRR G+ YSSL + +GE T +C P+YC +Q D H+P LS + TA
Sbjct: 322 VQSPAARPQRRAFVGIGYSSLHEFAGE*TRR*NCCPKYCRAQFSDLTFHIPTLSRGM*TA 501
Query: 498 VHDLGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMK 319
VHD G T V R VS +L + AG H P +PT KK PSM L SGFSKT S
Sbjct: 502 VHDSG*T*TVQREIVSLKL*LNLLAGDHCPPSIPTTKKLCPSMCQDCTLSSGFSKTISA* 681
Query: 318 VRNSARMT 295
SA MT
Sbjct: 682 PLKSAAMT 705
Score = 41.4 bits (84), Expect(2) = 1e-054
Identities = 13/28 (46%), Positives = 23/28 (82%)
Frame = +2 / -1
Query: 131 VDGKERFAFNGVSHVDPETPVKLAEYFN 214
++GK+R+A N VS + +TP+KLA+++N
Sbjct: 860 INGKQRYAVNSVSFISADTPLKLADHYN 777
Score = 28.6 bits (56), Expect(2) = 3e-025
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / +1
Query: 207 YSASLTGVSGSTCDTPLKANLSLP 136
+SASL+GVS DT L A L LP
Sbjct: 784 WSASLSGVSAEMKDTLLTAYLCLP 855
>gb|BU832276.1|BU832276 T031F10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 719
Score = 149 bits (321), Expect(3) = 5e-052
Identities = 57/152 (37%), Positives = 94/152 (61%)
Frame = +2 / +2
Query: 269 TAPTKMAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNL 448
T +KM +VI +R F+EV+ +N + + + H+ GYA F VGM G+WT SR TYN
Sbjct: 251 TGSSKMETSVINGTYRGFMEVILQNNDTKMQSYHLSGYAVFVVGMDYGEWTENSRGTYNK 430
Query: 449 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEY 628
D ++R T+QVYP +WTA++++ DN G+W++R+ + YLG++ YV +++PE + + E
Sbjct: 431 WDGIARSTVQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEDTNKTEL 610
Query: 629 NMPETSLRCGKVVGLPMPPSYLSV*SMHASRS 724
+P+ +L CG + P S+ +RS
Sbjct: 611 PVPDNALFCGALSKFQKPQDISFAVSITGNRS 706
Score = 57.4 bits (119), Expect(3) = 5e-052
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2 / +2
Query: 14 RSFRWNLTASAARPNPQGSYHYGQINIT 97
RS RWN++AS ARPNPQGS+ YG IN+T
Sbjct: 5 RSIRWNVSASGARPNPQGSFRYGSINVT 88
Score = 36.8 bits (74), Expect(3) = 5e-052
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 131 VDGKERFAFNGVSHVDPETPVKLAEYF 211
++GK R +G+S V+P TP++LA+ F
Sbjct: 125 INGKRRATLSGISFVNPATPIRLADQF 205
>gb|DT512199.1|DT512199 WS02418.B21_K02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_K02 3', mRNA sequence
Length = 927
Score = 177 bits (381), Expect(2) = 1e-051
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = +2 / -3
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ +R F+E+VF+N E + + H+DGY+FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 763 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 584
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 583 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 404
Query: 653 CGKVVG 670
CG+ G
Sbjct: 403 CGRASG 386
Score = 46.9 bits (96), Expect(2) = 1e-051
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +2 / -3
Query: 125 GKVDGKERFAFNGVSHVDPETPVKLAEYF 211
G+V+GK+R+ N VS + P+TP+KLA+YF
Sbjct: 922 GQVNGKQRYGVNSVSFIAPDTPMKLADYF 836
>gb|DN490449.1|DN490449 UK131TE03.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone UK131TE03 3', mRNA
sequence
Length = 667
Score = 191 bits (411), Expect(2) = 1e-050
Identities = 67/130 (51%), Positives = 99/130 (76%)
Frame = +2 / -3
Query: 284 MAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVS 463
++ +V+ A F+E+VF+N EK++ + H+DGY F+ +G G G+WT A RSTYNL+D ++
Sbjct: 551 LSTSVMSANLHDFLEIVFQNDEKTMQSWHLDGYDFWVIGYGNGQWTSAKRSTYNLVDALT 372
Query: 464 RHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPET 643
RHT+QVYP SWTA+ ++ DN GMW++RS IWERQYLG+Q Y+ V + SL +EY++P
Sbjct: 371 RHTVQVYPNSWTAIYVSLDNQGMWNLRSAIWERQYLGQQFYLRVWTQVHSLENEYDIPSN 192
Query: 644 SLRCGKVVGL 673
+LRCGK +G+
Sbjct: 191 ALRCGKAIGI 162
Score = 29.9 bits (59), Expect(2) = 1e-050
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +2 / -3
Query: 164 VSHVDPETPVKLAEYF 211
VS+++ +TPVKLA+YF
Sbjct: 662 VSYINSDTPVKLADYF 615
>gb|DT511310.1|DT511310 WS02416.B21_B23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_B23 3', mRNA sequence
Length = 914
Score = 171 bits (367), Expect(2) = 2e-050
Identities = 61/125 (48%), Positives = 88/125 (70%)
Frame = +2 / -2
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ +R ++E+VF+N E + + H+DGY+FF VGM G+WT ASR YNL D V+R T
Sbjct: 724 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 545
Query: 476 QVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 655
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 544 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 365
Query: 656 GKVVG 670
G+ G
Sbjct: 364 GRASG 350
Score = 49.6 bits (102), Expect(2) = 2e-050
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +2 / -2
Query: 98 RTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLAEYF 211
RTI +A G+V+G +R+ N VS + P+TP+K+A+YF
Sbjct: 913 RTIIVANSAGQVNGNQRYGVNSVSFIAPDTPMKIADYF 800
>gb|DT518220.1|DT518220 WS02436.B21_I16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02436_I16 3', mRNA sequence
Length = 915
Score = 171 bits (367), Expect(2) = 2e-050
Identities = 61/125 (48%), Positives = 88/125 (70%)
Frame = +2 / -3
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ +R ++E+VF+N E + + H+DGY+FF VGM G+WT ASR YNL D V+R T
Sbjct: 724 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 545
Query: 476 QVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 655
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 544 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 365
Query: 656 GKVVG 670
G+ G
Sbjct: 364 GRASG 350
Score = 49.6 bits (102), Expect(2) = 2e-050
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +2 / -3
Query: 98 RTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLAEYF 211
RTI +A G+V+G +R+ N VS + P+TP+K+A+YF
Sbjct: 913 RTIIVANSAGQVNGNQRYGVNSVSFIAPDTPMKIADYF 800
>gb|BH860723.1|BH860723 ORNL222 Poplar BAC Library Populus trichocarpa genomic, DNA
sequence
Length = 981
Score = 99.1 bits (210), Expect(4) = 2e-049
Identities = 38/64 (59%), Positives = 49/64 (76%)
Frame = +2 / -1
Query: 23 RWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLA 202
RWNLTAS RPNPQGSYHYG I +RTI LA ++ K+R+A NGVS++ +TP+K+A
Sbjct: 762 RWNLTASGPRPNPQGSYHYGLIKTSRTITLANSGPIINRKQRYAVNGVSYIPADTPLKIA 583
Query: 203 EYFN 214
+YFN
Sbjct: 582 DYFN 571
Score = 57.0 bits (118), Expect(4) = 2e-049
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2 / -3
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYL 571
+QVYP+SWTA+ M DN GMW+IRS RQYL
Sbjct: 100 MQVYPKSWTAIYMALDNVGMWNIRSEN*ARQYL 2
Score = 51.0 bits (105), Expect(4) = 2e-049
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2 / -1
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVG 400
V+ A FR FIE+VF+N E ++ + HIDG++FF VG
Sbjct: 495 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVG 391
Score = 46.4 bits (95), Expect(4) = 2e-049
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2 / -2
Query: 389 FAVGMGPGKWTPASRSTYNLLDTVSRHTIQVYPR 490
+ M G+WTPASR+ YNL DTV+R T QV+ +
Sbjct: 299 YVSSMDGGQWTPASRARYNLRDTVARCTTQVWTK 198
>gb|DT485142.1|DT485142 WS02527.B21_G13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_G13 3', mRNA sequence
Length = 904
Score = 171 bits (367), Expect(2) = 6e-048
Identities = 61/125 (48%), Positives = 88/125 (70%)
Frame = +2 / -2
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ +R ++E+VF+N E + + H+DGY+FF VGM G+WT ASR YNL D V+R T
Sbjct: 744 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 565
Query: 476 QVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 655
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 564 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 385
Query: 656 GKVVG 670
G+ G
Sbjct: 384 GRASG 370
Score = 40.9 bits (83), Expect(2) = 6e-048
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +2 / -2
Query: 128 KVDGKERFAFNGVSHVDPETPVKLAEYF 211
+V+G +R+ N VS + P+TP+K+A+YF
Sbjct: 903 QVNGNQRYGVNSVSFIAPDTPMKIADYF 820
>gb|CF232662.1|CF232662 PtaJXO0014B9B0903 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 675
Score = 188 bits (404), Expect(2) = 2e-047
Identities = 67/130 (51%), Positives = 98/130 (75%)
Frame = +2 / +3
Query: 284 MAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVS 463
++ +V+ A F+EVVF+N EK++ + H+DGY F+ +G G G W A RSTYNL+D ++
Sbjct: 99 LSTSVMSANLHDFLEVVFQNDEKTMQSWHLDGYDFWVIGYGNGLWNSAKRSTYNLVDALT 278
Query: 464 RHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPET 643
RHT+QVYP+SWTA+ ++ DN GMW++RS IWERQYLG+Q Y+ V + SL +EY++P
Sbjct: 279 RHTVQVYPKSWTAIYVSLDNQGMWNMRSAIWERQYLGQQFYLRVWTQVHSLANEYDIPSN 458
Query: 644 SLRCGKVVGL 673
+LRCGK +G+
Sbjct: 459 ALRCGKAIGI 488
Score = 22.6 bits (43), Expect(2) = 2e-047
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +2 / +3
Query: 182 ETPVKLAEYF 211
+TP+KLA+YF
Sbjct: 6 DTPLKLADYF 35
>gb|DT508892.1|DT508892 WS02422.BR_D15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_D15 5', mRNA sequence
Length = 506
Score = 159 bits (341), Expect(2) = 8e-047
Identities = 59/104 (56%), Positives = 78/104 (75%)
Frame = +2 / +1
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ A+FR F+E+VF+N E + + HI+GY+F+ VGM G WTPASR+ YNL D VSR T
Sbjct: 187 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 366
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISP 604
QVYP+SWTA+ + DN GMW+IR+ W RQYLG+Q Y+ V SP
Sbjct: 367 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 498
Score = 105 bits (224), Expect(2) = 2e-026
Identities = 53/106 (50%), Positives = 64/106 (60%)
Frame = -2 / -1
Query: 612 DRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHDLGYTWIVCRLTVSRRLYVL 433
D +GE T +C PRYCL+Q M H+P LS+ + AVHDLGYT +V R T S RLY L
Sbjct: 506 DSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHDLGYT*VVQRETASLRLY*L 327
Query: 432 RDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRNSARMT 295
R AGVH P +PT +K P M + +FS F T S K SA MT
Sbjct: 326 RLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALKSAPMT 189
Score = 49.2 bits (101), Expect(2) = 8e-047
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 101 TIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLAEYF 211
TIKL +V+GK+R+A N VS V +TP+K+A+YF
Sbjct: 4 TIKLESSAAQVNGKQRYAVNSVSFVPADTPLKIADYF 114
Score = 34.5 bits (69), Expect(2) = 2e-026
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMV 100
LK SA L GVS T +T L A L LP T ++SLMV
Sbjct: 116 LK*SAILRGVSAGTNETLLTAYLCLPLT*AAELSSLMV 3
>gb|BU832092.1|BU832092 T029C12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 780
Score = 177 bits (381), Expect(2) = 2e-046
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = +2 / +1
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ +R F+E+VF+N E + + H+DGY+FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 136 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 315
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 316 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 495
Query: 653 CGKVVG 670
CG+ G
Sbjct: 496 CGRASG 513
Score = 29.9 bits (59), Expect(2) = 2e-046
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 158 NGVSHVDPETPVKLAEYF 211
+ VS + P+TP+KLA+YF
Sbjct: 10 HSVSFIAPDTPMKLADYF 63
>gb|DT513501.1|DT513501 WS02422.B21_D15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_D15 3', mRNA sequence
Length = 507
Score = 158 bits (339), Expect(2) = 2e-046
Identities = 59/103 (57%), Positives = 78/103 (75%)
Frame = +2 / -1
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ A+FR F+E+VF+N E + + HI+GY+F+ VGM G WTPASR+ YNL D VSR T
Sbjct: 321 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 142
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVIS 601
QVYP+SWTA+ + DN GMW+IR+ W RQYLG+Q Y+SV S
Sbjct: 141 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMSVYS 13
Score = 102 bits (218), Expect(2) = 1e-025
Identities = 52/102 (50%), Positives = 62/102 (60%)
Frame = -2 / +2
Query: 600 EMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHDLGYTWIVCRLTVSRRLYVLRDAG 421
E TL +C PRYCL+Q M H+P LS+ + AVHDLGYT +V R T S RLY LR AG
Sbjct: 14 E*TLI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHDLGYT*VVQRETASLRLY*LRLAG 193
Query: 420 VHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRNSARMT 295
VH P +PT +K P M + +FS F T S K SA MT
Sbjct: 194 VHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALKSAPMT 319
Score = 49.2 bits (101), Expect(2) = 2e-046
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2 / -1
Query: 101 TIKLAMGRGKVDGKERFAFNGVSHVDPETPVKLAEYF 211
TIKL +V+GK+R+A N VS V +TP+K+A+YF
Sbjct: 504 TIKLESSAAQVNGKQRYAVNSVSFVPADTPLKIADYF 394
Score = 34.5 bits (69), Expect(2) = 1e-025
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -2 / +2
Query: 213 LKYSASLTGVSGSTCDTPLKANLSLPSTLPRPMASLMV 100
LK SA L GVS T +T L A L LP T ++SLMV
Sbjct: 392 LK*SAILRGVSAGTNETLLTAYLCLPLT*AAELSSLMV 505
>gb|CX655574.1|CX655574 PO02036F11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02036F11 5', mRNA sequence
Length = 520
Score = 186 bits (400), Expect = 3e-046
Identities = 69/126 (54%), Positives = 93/126 (73%)
Frame = +2 / +2
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ A+FR F+E+VF+N E + + HI+GY+F+ VGM G WTPASR+ YNL D VSR T
Sbjct: 74 SVLGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 253
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
QVYP+SWTA+ + DN GMW+IR+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 254 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 433
Query: 653 CGKVVG 670
CG+ +G
Sbjct: 434 CGRAIG 451
Score = 122 bits (262), Expect = 3e-027
Identities = 62/125 (49%), Positives = 74/125 (59%)
Frame = -2 / -2
Query: 669 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHD 490
P LPQRR G+ YSS D +GE T +C PRYCL+Q M H+P LS+ + AVHD
Sbjct: 450 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 271
Query: 489 LGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRN 310
LGYT +V R T S RLY LR AGVH P +PT +K P M + +FS F T S K
Sbjct: 270 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 91
Query: 309 SARMT 295
SA T
Sbjct: 90 SAPKT 76
>gb|CV238057.1|CV238057 WS0125.B21_C06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0125_C06 3', mRNA sequence
Length = 697
Score = 185 bits (399), Expect = 4e-046
Identities = 72/125 (57%), Positives = 92/125 (73%)
Frame = +2 / -1
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ A FR FIE+VF+N E ++ + HIDG++FF VGM G+WTPASR+ YNL DTV+R T
Sbjct: 628 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVARCTT 449
Query: 476 QVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 655
QVYP+SWTA+ M DN GMW+IRS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 448 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLC 269
Query: 656 GKVVG 670
G+ G
Sbjct: 268 GRARG 254
Score = 112 bits (240), Expect = 3e-024
Identities = 61/125 (48%), Positives = 73/125 (58%)
Frame = -2 / +3
Query: 669 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHD 490
P PQRR G+ SSL + +GE TL +C P+YCL+Q D M H+P LS + AVHD
Sbjct: 255 PLARPQRRAFFGIGNSSLHECAGE*TLR*NC*PKYCLAQFSDLMFHIPTLSKAM*IAVHD 434
Query: 489 LGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRN 310
LG T +V R TVS +L AGVH P +PT KK *PSM + S F KT SM R
Sbjct: 435 LG*T*VVQRATVSLKL*RALLAGVHCPPSIPTTKKE*PSMCHD*TVSSQFWKTISMNSRK 614
Query: 309 SARMT 295
A MT
Sbjct: 615 LADMT 629
>gb|CF232732.1|CF232732 PtaJXO0015B7B0703 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 566
Score = 184 bits (397), Expect = 8e-046
Identities = 66/123 (53%), Positives = 93/123 (75%)
Frame = +2 / +3
Query: 305 AEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTIQVY 484
A F+EVVF+N EK++ + H+DGY F+ +G G G W A RSTYNL+D ++RHT+QVY
Sbjct: 3 ANLHDFLEVVFQNDEKTMQSWHLDGYDFWVIGYGNGLWNSAKRSTYNLVDALTRHTVQVY 182
Query: 485 PRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKV 664
P+SWTA+ ++ DN GMW++RS IWERQYLG+Q Y+ V + SL +EY++P +LRCGK
Sbjct: 183 PKSWTAIYVSLDNQGMWNMRSAIWERQYLGQQFYLRVWTQVHSLANEYDIPSNALRCGKA 362
Query: 665 VGL 673
+G+
Sbjct: 363 IGI 371
>gb|DT516575.1|DT516575 WS02431.B21_M23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02431_M23 3', mRNA sequence
Length = 712
Score = 183 bits (395), Expect = 1e-045
Identities = 72/125 (57%), Positives = 92/125 (73%)
Frame = +2 / -3
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ A FR FIE+VF+N E ++ + HIDG++FF VGM G+WT ASR+ YNL DTV+R T
Sbjct: 629 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTTASRARYNLRDTVARCTT 450
Query: 476 QVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 655
QVYP+SWTA+ M DN GMW+IRS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 449 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLC 270
Query: 656 GKVVG 670
G+V G
Sbjct: 269 GRVRG 255
Score = 111 bits (236), Expect = 1e-023
Identities = 61/125 (48%), Positives = 73/125 (58%)
Frame = -2 / +1
Query: 669 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLDRMLHMPALSNVIITAVHD 490
P T PQRR G+ SSL + +GE TL +C P+YCL+Q D M H+P LS + AVHD
Sbjct: 256 PLTRPQRRAFFGIGNSSLHECAGE*TLR*NC*PKYCLAQFSDLMFHIPTLSKAM*IAVHD 435
Query: 489 LGYTWIVCRLTVSRRLYVLRDAGVHLPGPMPTAKKA*PSMWMVSMLFSGFSKTTSMKVRN 310
LG T +V R TVS +L A VH P +PT KK *PSM + S F KT SM R
Sbjct: 436 LG*T*VVQRATVSLKL*RALLAVVHCPPSIPTTKKE*PSMCHD*TVSSQFWKTISMNSRK 615
Query: 309 SARMT 295
A MT
Sbjct: 616 LADMT 630
>gb|DT476539.1|DT476539 WS01229.B21_P03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_P03 3', mRNA sequence
Length = 869
Score = 171 bits (367), Expect(2) = 1e-043
Identities = 61/125 (48%), Positives = 88/125 (70%)
Frame = +2 / -1
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ +R ++E+VF+N E + + H+DGY+FF VGM G+WT ASR YNL D V+R T
Sbjct: 749 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 570
Query: 476 QVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 655
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 569 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 390
Query: 656 GKVVG 670
G+ G
Sbjct: 389 GRASG 375
Score = 26.7 bits (52), Expect(2) = 1e-043
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 167 SHVDPETPVKLAEYF 211
S + P+TP+K+A+YF
Sbjct: 869 SFIAPDTPMKIADYF 825
>gb|CK092927.1|CK092927 G100P57.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G100P57 3', mRNA sequence
Length = 826
Score = 177 bits (381), Expect = 1e-043
Identities = 65/126 (51%), Positives = 91/126 (72%)
Frame = +2 / -1
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ +R F+E+VF+N E + + H+DGY+FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 763 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 584
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 583 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 404
Query: 653 CGKVVG 670
CG+ G
Sbjct: 403 CGRASG 386
>gb|BP934231.1|BP934231 BP934231 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-062_A03.r 3', mRNA sequence
Length = 706
Score = 176 bits (379), Expect = 2e-043
Identities = 65/126 (51%), Positives = 90/126 (71%)
Frame = +2 / -3
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+V+ +R F+E+VF N E + + H+DGY+FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 701 SVLTLPYRAFVEIVFRNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 522
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 521 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 342
Query: 653 CGKVVG 670
CG+ G
Sbjct: 341 CGRASG 324
>gb|AJ777809.1|AJ777809 AJ777809 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035D05F1, mRNA sequence
Length = 736
Score = 155 bits (333), Expect(2) = 1e-042
Identities = 58/152 (38%), Positives = 96/152 (63%)
Frame = +2 / +1
Query: 269 TAPTKMAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNL 448
T P KMA +VI +R F+EV+ +N + + + H+ GYA F VGM G+WT SR TYN
Sbjct: 178 TGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNK 357
Query: 449 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEY 628
D ++R T+Q YP +WT ++++ DN G+W++R+ + YLG++ YV +++PE++ + E
Sbjct: 358 WDGIARSTVQAYPGAWTTILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEKTNKTEL 537
Query: 629 NMPETSLRCGKVVGLPMPPSYLSV*SMHASRS 724
+P+ +L CG++ L P S+ +RS
Sbjct: 538 PIPDNALFCGELSKLQKPEDISFAVSITGNRS 633
Score = 39.1 bits (79), Expect(2) = 1e-042
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2 / +1
Query: 128 KVDGKERFAFNGVSHVDPETPVKLAEYF 211
K++GK R +G+S V+P TP++LA+ F
Sbjct: 49 KINGKRRATLSGISFVNPTTPIRLADQF 132
>gb|CV274281.1|CV274281 WS0172.B21_M11 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0172_M11 3', mRNA sequence
Length = 903
Score = 155 bits (334), Expect(2) = 4e-042
Identities = 58/152 (38%), Positives = 96/152 (63%)
Frame = +2 / -1
Query: 269 TAPTKMAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNL 448
T P KMA +VI +R F+EV+ +N + + + H+ GYA F VGM G+WT SR TYN
Sbjct: 777 TGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNK 598
Query: 449 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEY 628
D ++R T+Q YP +WTA++++ DN G+W++R+ + YLG++ Y+ +++PE + + E
Sbjct: 597 WDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYIRIVNPEETNKTEL 418
Query: 629 NMPETSLRCGKVVGLPMPPSYLSV*SMHASRS 724
+P+ +L CG++ L P S+ +RS
Sbjct: 417 PIPDNALFCGELSKLQKPEDISFAASITGNRS 322
Score = 36.8 bits (74), Expect(2) = 4e-042
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / -1
Query: 131 VDGKERFAFNGVSHVDPETPVKLAEYF 211
++GK R +G+S V+P TP++LA+ F
Sbjct: 903 INGKRRATLSGISFVNPTTPIRLADQF 823
>gb|DN492283.1|DN492283 V062A01.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V062A01 3', mRNA sequence
Length = 750
Score = 171 bits (367), Expect = 1e-041
Identities = 61/125 (48%), Positives = 88/125 (70%)
Frame = +2 / -2
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ +R ++E+VF+N E + + H+DGY+FF VGM G+WT ASR YNL D V+R T
Sbjct: 740 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 561
Query: 476 QVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 655
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 560 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 381
Query: 656 GKVVG 670
G+ G
Sbjct: 380 GRASG 366
>gb|CV130787.1|CV130787 B9SP10h10 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 720
Score = 169 bits (363), Expect = 4e-041
Identities = 64/110 (58%), Positives = 80/110 (72%)
Frame = +2 / +1
Query: 344 PEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDN 523
PE ++ + HIDG+ FF VGM G+W+PASR +YNL DT+SR T+QVYP SWTAV M DN
Sbjct: 37 PEDNVQSWHIDGHNFFVVGMDGGQWSPASRLSYNLRDTISRCTVQVYPESWTAVYMPLDN 216
Query: 524 AGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGL 673
GMW++RS W RQYLG+Q Y+ V SP S RDEY +P +L CG+ GL
Sbjct: 217 VGMWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPTNALLCGQAAGL 366
>gb|CB240309.1|CB240309 PopSC00287 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00287, mRNA sequence
Length = 473
Score = 167 bits (360), Expect = 1e-040
Identities = 62/115 (53%), Positives = 84/115 (73%)
Frame = +2 / +2
Query: 326 EVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTIQVYPRSWTAV 505
E+VF+N E + + H+DGY+FF VGM G+WT ASR+ YNL D VSR TIQVYP++WTA+
Sbjct: 2 EIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCTIQVYPKAWTAI 181
Query: 506 MMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVG 670
+ DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L CG+ G
Sbjct: 182 YIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRASG 346
>gb|CA824413.1|CA824413 R41F09 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 601
Score = 155 bits (334), Expect(2) = 4e-040
Identities = 58/152 (38%), Positives = 96/152 (63%)
Frame = +2 / +1
Query: 269 TAPTKMAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNL 448
T P KMA +VI +R F+EV+ +N + + + H+ GYA F VGM G+WT SR TYN
Sbjct: 121 TGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNK 300
Query: 449 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEY 628
D ++R T+Q YP +WTA++++ DN G+W++R+ + YLG++ Y+ +++PE + + E
Sbjct: 301 WDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYIRIVNPEETNKTEL 480
Query: 629 NMPETSLRCGKVVGLPMPPSYLSV*SMHASRS 724
+P+ +L CG++ L P S+ +RS
Sbjct: 481 PIPDNALFCGELSKLQKPEDISFAVSITGNRS 576
Score = 29.9 bits (59), Expect(2) = 4e-040
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2 / +1
Query: 146 RFAFNGVSHVDPETPVKLAEYF 211
R +G+S V+P TP++LA+ F
Sbjct: 10 RATLSGISFVNPTTPIRLADQF 75
>gb|CN519468.1|CN519468 GQ0101.B3_C19 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0101_C19 5', mRNA sequence
Length = 730
Score = 107 bits (229), Expect(2) = 3e-039
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = +2 / +1
Query: 5 NQCRSFRWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPE 184
NQ RS R NLTAS RPNPQGSYHYG IN TRTI +A G+V+G +R+ N VS + P+
Sbjct: 235 NQARSIRTNLTASGPRPNPQGSYHYGMINTTRTIIVANSAGQVNGNQRYGVNSVSFIAPD 414
Query: 185 TPVKLAEYF 211
TP+K+A+YF
Sbjct: 415 TPMKIADYF 441
Score = 75.3 bits (158), Expect(2) = 3e-039
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +2 / +1
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTI 475
V+ +R ++E+VF+N E + + H+DGY+FF GM G+WT AS D V+ T
Sbjct: 517 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFXXGMDGGQWTTASXXXXXXXDAVAXXTT 696
Query: 476 QVYPRSWTAV 505
Y +WTA+
Sbjct: 697 XXYXXAWTAI 726
>gb|DT487515.1|DT487515 WS02533.B21_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_O14 3', mRNA sequence
Length = 877
Score = 143 bits (306), Expect(2) = 1e-038
Identities = 51/111 (45%), Positives = 82/111 (73%)
Frame = +2 / -3
Query: 275 PTKMAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLD 454
P K+ ++I F+ F+E++F+N + ++ + H+DGYAFF VGM G WT SRSTYN D
Sbjct: 683 PPKVDTSLINGTFKGFMEIIFQNNDTAVQSYHMDGYAFFVVGMDFGVWTENSRSTYNKWD 504
Query: 455 TVSRHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPE 607
V+R T QV+P +WTA++++ DNAG+W++RS + YLG+++Y+S+++PE
Sbjct: 503 GVARSTTQVFPGAWTAILVSLDNAGIWNLRSENLDSWYLGQEVYLSIMNPE 351
Score = 37.7 bits (76), Expect(2) = 1e-038
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 131 VDGKERFAFNGVSHVDPETPVKLAEYFN 214
+DGK NG+S++ P TP+KLA+ +N
Sbjct: 815 IDGKWCTTLNGISYLPPSTPLKLAQQYN 732
>gb|DT482101.1|DT482101 WS02533.BR_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_O14 5', mRNA sequence
Length = 802
Score = 143 bits (306), Expect(2) = 1e-038
Identities = 51/111 (45%), Positives = 82/111 (73%)
Frame = +2 / +1
Query: 275 PTKMAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLD 454
P K+ ++I F+ F+E++F+N + ++ + H+DGYAFF VGM G WT SRSTYN D
Sbjct: 202 PPKVDTSLINGTFKGFMEIIFQNNDTAVQSYHMDGYAFFVVGMDFGVWTENSRSTYNKWD 381
Query: 455 TVSRHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPE 607
V+R T QV+P +WTA++++ DNAG+W++RS + YLG+++Y+S+++PE
Sbjct: 382 GVARSTTQVFPGAWTAILVSLDNAGIWNLRSENLDSWYLGQEVYLSIMNPE 534
Score = 37.7 bits (76), Expect(2) = 1e-038
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2 / +1
Query: 131 VDGKERFAFNGVSHVDPETPVKLAEYFN 214
+DGK NG+S++ P TP+KLA+ +N
Sbjct: 70 IDGKWCTTLNGISYLPPSTPLKLAQQYN 153
>gb|BU831146.1|BU831146 T017G12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 695
Score = 157 bits (337), Expect = 1e-037
Identities = 58/112 (51%), Positives = 79/112 (70%)
Frame = +2 / +3
Query: 335 FENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTIQVYPRSWTAVMMT 514
+ E + + H+DGY+FF VGM G+WT ASR+ YNL D VSR TIQVYP++WTA+ +
Sbjct: 3 YSKHEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCTIQVYPKAWTAIYIP 182
Query: 515 FDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVG 670
DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L CG+ G
Sbjct: 183 LDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRASG 338
>gb|DV466382.1|DV466382 MTUNUL1.P5.H09 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 748
Score = 107 bits (229), Expect(2) = 5e-036
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = +2 / +3
Query: 5 NQCRSFRWNLTASAARPNPQGSYHYGQINITRTIKLAMGRGKVDGKERFAFNGVSHVDPE 184
NQ RS R NLTAS RPNPQGSYHYG IN TRTI +A G+V+G +R+ N VS + P+
Sbjct: 327 NQARSIRTNLTASGPRPNPQGSYHYGMINTTRTIIVANSAGQVNGNQRYGVNSVSFIAPD 506
Query: 185 TPVKLAEYF 211
TP+K+A+YF
Sbjct: 507 TPMKIADYF 533
Score = 64.3 bits (134), Expect(2) = 5e-036
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2 / +3
Query: 296 VIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASR 433
V+ +R ++E+VF+N E + + H+DGY+FF VGM G+WT ASR
Sbjct: 609 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASR 746
>gb|BI131350.1|BI131350 G119P62Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 389
Score = 151 bits (324), Expect = 9e-036
Identities = 55/101 (54%), Positives = 72/101 (71%)
Frame = +2 / +1
Query: 368 HIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSIRS 547
H+DGY+FF VGM G+WT ASR YNL D V+R T QVYP +WTA+ + DN GMW++R+
Sbjct: 19 HLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTTQVYPNAWTAIYIPLDNVGMWNLRT 198
Query: 548 NIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVG 670
W RQYLG+Q Y+ V + SLRDEY +P+ +L CG+ G
Sbjct: 199 EFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRASG 321
>gb|DT518576.1|DT518576 WS02438.B21_J08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_J08 3', mRNA sequence
Length = 860
Score = 149 bits (319), Expect = 4e-035
Identities = 53/130 (40%), Positives = 87/130 (66%)
Frame = +2 / -1
Query: 269 TAPTKMAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNL 448
T +KM +VI +R F+EV+ +N + + + H+ GYA F VGM G+WT SR TYN
Sbjct: 803 TGSSKMETSVINGTYRGFMEVILQNNDTKMQSYHLSGYAVFVVGMDYGEWTENSRGTYNK 624
Query: 449 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEY 628
D ++R T+QVYP +WTA++++ DN G+W++R+ + YLG++ YV +++PE + + E
Sbjct: 623 WDGIARSTVQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEETNKTEL 444
Query: 629 NMPETSLRCG 658
+P+ +L CG
Sbjct: 443 PIPDNALFCG 414
>gb|CN522788.1|CN522788 GQ0122.B3_B18 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0122_B18 5', mRNA sequence
Length = 612
Score = 80.3 bits (169), Expect(3) = 7e-033
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +2 / +1
Query: 269 TAPTKMAPNVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNL 448
T +KM +VI +R F+EV+ +N + + + H+ GYA F VGM G+WT SR TYN
Sbjct: 307 TGSSKMETSVINGTYRGFMEVILQNNDTKMQSYHLSGYAVFVVGMDYGEWTENSRGTYNK 486
Query: 449 LDTVSRHTIQV 481
D ++R T+QV
Sbjct: 487 WDGIARSTVQV 519
Score = 62.5 bits (130), Expect(3) = 7e-033
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2 / +1
Query: 5 NQCRSFRWNLTASAARPNPQGSYHYGQINIT 97
NQ RS RWN++AS ARPNPQGS+ YG IN+T
Sbjct: 52 NQARSIRWNVSASGARPNPQGSFRYGSINVT 144
Score = 36.8 bits (74), Expect(3) = 7e-033
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 131 VDGKERFAFNGVSHVDPETPVKLAEYF 211
++GK R +G+S V+P TP++LA+ F
Sbjct: 181 INGKRRATLSGISFVNPATPIRLADQF 261
>gb|AI164321.1|AI164321 A059P32U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 452
Score = 130 bits (278), Expect(2) = 1e-032
Identities = 45/76 (59%), Positives = 62/76 (81%)
Frame = +2 / +1
Query: 347 EKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNA 526
+K++ + H+DGY F+ +G G G+WT A RSTYNL+D ++RHT+QVYP SWTA+ ++ DN
Sbjct: 1 KKTMRSWHLDGYDFWVIGYGNGQWTSAKRSTYNLVDALTRHTVQVYPNSWTAIYVSLDNQ 180
Query: 527 GMWSIRSNIWERQYLG 574
GMW++RS IWERQYLG
Sbjct: 181 GMWNLRSAIWERQYLG 228
Score = 30.9 bits (61), Expect(2) = 1e-032
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 596 ISPERSLRDEYNMPETSLRCGK 661
+ SL +EY++P +LRCGK
Sbjct: 248 LDSSHSLENEYDIPSNALRCGK 313
>gb|DN484355.1|DN484355 G130P50.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G130P50 3', mRNA sequence
Length = 685
Score = 138 bits (295), Expect = 9e-032
Identities = 51/135 (37%), Positives = 85/135 (62%)
Frame = +2 / -3
Query: 320 FIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHTIQVYPRSWT 499
F+EV+ +N + + + H+ GYA F VGM G+WT SR TYN D ++R T+Q YP +WT
Sbjct: 680 FMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWT 501
Query: 500 AVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPM 679
A++++ DN G+W++R+ + YLG++ YV +++PE + + E +P+ +L CG++ L
Sbjct: 500 AILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEETNKTELPIPDNALFCGELSKLQK 321
Query: 680 PPSYLSV*SMHASRS 724
P S +RS
Sbjct: 320 PEDISFAVSTTGNRS 276
>gb|BU812401.1|BU812401 UL95TH09 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 506
Score = 133 bits (286), Expect = 2e-030
Identities = 49/95 (51%), Positives = 65/95 (68%)
Frame = +2 / +3
Query: 386 FFAVGMGPGKWTPASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSIRSNIWERQ 565
FF VGM G+WT A R YNL D V+R T QVYP +WTA+ + DN GMW++R+ W RQ
Sbjct: 3 FFVVGMDGGQWTTAGRDQYNLRDAVARCTTQVYPNAWTAIYIPLDNVGMWNLRTEFWARQ 182
Query: 566 YLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVG 670
YLG+Q Y+ V + SLRDE+ +P+ +L CG+ G
Sbjct: 183 YLGQQFYLRVYTDSTSLRDEFPIPKNALLCGRASG 287
>gb|CA931453.1|CA931453 MTU2TA.P7.E06 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 580
Score = 133 bits (285), Expect = 2e-030
Identities = 52/135 (38%), Positives = 82/135 (60%)
Frame = +2 / -1
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+VI A + FIE++ + + + + H++GY+FF VGM G W+ SR +YN D +SR T
Sbjct: 580 SVINATSKGFIEIILQTNDTRMQSFHMNGYSFFVVGMDWGIWSENSRGSYNKWDAISRST 401
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 652
++VYP WTAV+ + DNAG+W++R +R YLG++ Y+ +I+PE + E P L
Sbjct: 400 VEVYPGGWTAVLASLDNAGVWNLRVENLDRWYLGQETYMRIINPEENGETEMPPPNNVLY 221
Query: 653 CGKVVGLPMPPSYLS 697
CG + S+ S
Sbjct: 220 CGALASKQQDLSHKS 176
>gb|CA930944.1|CA930944 MTU2TA.P12.F04 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 438
Score = 130 bits (279), Expect = 1e-029
Identities = 47/107 (43%), Positives = 74/107 (69%)
Frame = +2 / +2
Query: 293 NVIRAEFRTFIEVVFENPEKSIDTIHIDGYAFFAVGMGPGKWTPASRSTYNLLDTVSRHT 472
+VI A F+ FIE++ +N + + + H++GY+FF VGM G W+ SR +YN D +SR T
Sbjct: 95 SVINATFKGFIEIILQNNDTRMQSFHMNGYSFFVVGMDWGIWSENSRGSYNKWDAISRST 274
Query: 473 IQVYPRSWTAVMMTFDNAGMWSIRSNIWERQYLGEQLYVSVISPERS 613
++VYP WTAV+ + DNAG+W++R +R YLG+ Y+ +I+PE +
Sbjct: 275 VEVYPGGWTAVLASLDNAGVWNLRVENLDRWYLGQDTYMRIINPEEN 415
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 448,884,536
Number of Sequences: 369679
Number of extensions: 5778034
Number of successful extensions: 40237
Number of sequences better than 1.0e-020: 81
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 16584205944
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)