TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404725.2.2
(910 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN490449.1|DN490449 UK131TE03.3pR Populus apical shoot c... 173 1e-042
gb|CV275896.1|CV275896 WS0177.B21_P21 PTxD-NR-A-8 Populus t... 173 2e-042
gb|CF232662.1|CF232662 PtaJXO0014B9B0903 Poplar cDNA librar... 171 8e-042
gb|DT516575.1|DT516575 WS02431.B21_M23 PTxD-ICC-N-A-14 Popu... 168 5e-041
gb|CV238057.1|CV238057 WS0125.B21_C06 PT-GT-FL-A-3 Populus ... 166 3e-040
gb|DN489317.1|DN489317 T023D01.3pR Populus shoot meristem c... 166 3e-040
gb|CF232732.1|CF232732 PtaJXO0015B7B0703 Poplar cDNA librar... 165 4e-040
gb|CX655574.1|CX655574 PO02036F11 Poplar SC cDNA library Po... 165 5e-040
gb|CV256643.1|CV256643 WS0244.B21_G18 PTxD-ICC-N-A-14 Popul... 164 7e-040
gb|DT510085.1|DT510085 WS02425.BR_I20 PTxD-ICC-N-A-14 Popul... 164 7e-040
gb|DT514705.1|DT514705 WS02425.B21_I20 PTxD-ICC-N-A-14 Popu... 164 7e-040
gb|DT517583.1|DT517583 WS02434.B21_L14 PTxD-ICC-N-A-14 Popu... 164 7e-040
gb|BU832092.1|BU832092 T029C12 Populus apical shoot cDNA li... 158 6e-038
gb|CK092927.1|CK092927 G100P57.3pR Populus tension wood cDN... 158 6e-038
gb|DT512199.1|DT512199 WS02418.B21_K02 PTxD-ICC-N-A-14 Popu... 158 6e-038
gb|DT520978.1|DT520978 WS02033.B21_B04 PTxN-IB-N-A-11 Popul... 158 6e-038
gb|DT525144.1|DT525144 WS02044.C21_J01 PTxN-IB-N-A-11 Popul... 158 6e-038
gb|BP934231.1|BP934231 BP934231 full-length enriched poplar... 157 1e-037
gb|CV130787.1|CV130787 B9SP10h10 Populus stem seasonal libr... 153 2e-036
gb|CN523502.1|CN523502 GQ015M07.T3_B08 GQ015 Populus tricho... 151 5e-036
gb|DN492283.1|DN492283 V062A01.3pR Populus male catkins cDN... 151 5e-036
gb|DT476539.1|DT476539 WS01229.B21_P03 PT-GT-FL-A-3 Populus... 151 5e-036
gb|DT485142.1|DT485142 WS02527.B21_G13 PT-MB-N-A-15 Populus... 151 5e-036
gb|DT511310.1|DT511310 WS02416.B21_B23 PTxD-ICC-N-A-14 Popu... 151 5e-036
gb|DT518220.1|DT518220 WS02436.B21_I16 PTxD-ICC-N-A-14 Popu... 151 5e-036
gb|CF233492.1|CF233492 PtaJXO0024C2C0206 Poplar cDNA librar... 148 4e-035
gb|CB240309.1|CB240309 PopSC00287 Poplar SC cDNA library Po... 148 6e-035
gb|BU831146.1|BU831146 T017G12 Populus apical shoot cDNA li... 142 4e-033
gb|CA824413.1|CA824413 R41F09 two-month-old roots from clon... 140 1e-032
gb|CV274281.1|CV274281 WS0172.B21_M11 PTxD-NR-A-8 Populus t... 140 1e-032
gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, comple... 100 1e-032
gb|AJ777809.1|AJ777809 AJ777809 Populus euphratica root 3-6... 140 1e-032
gb|BI131350.1|BI131350 G119P62Y Populus cambium cDNA librar... 138 7e-032
gb|DT508892.1|DT508892 WS02422.BR_D15 PTxD-ICC-N-A-14 Popul... 138 7e-032
gb|DT513501.1|DT513501 WS02422.B21_D15 PTxD-ICC-N-A-14 Popu... 137 1e-031
gb|BU832276.1|BU832276 T031F10 Populus apical shoot cDNA li... 135 3e-031
gb|BU812401.1|BU812401 UL95TH09 Populus leaf cDNA library P... 133 1e-030
gb|DT518576.1|DT518576 WS02438.B21_J08 PTxD-ICC-N-A-14 Popu... 133 1e-030
gb|DN483723.1|DN483723 PSO202D09 Populus tomentiglandulosa ... 118 2e-029
gb|AI164321.1|AI164321 A059P32U Hybrid aspen plasmid librar... 116 9e-029
gb|DT482101.1|DT482101 WS02533.BR_O14 PT-MB-N-A-15 Populus ... 123 1e-027
gb|DT487515.1|DT487515 WS02533.B21_O14 PT-MB-N-A-15 Populus... 123 1e-027
gb|DN484355.1|DN484355 G130P50.3pR Populus tension wood cDN... 121 6e-027
gb|CV230926.1|CV230926 WS0193.B21_A09 PT-DX-N-A-10 Populus ... 119 3e-026
gb|CA931453.1|CA931453 MTU2TA.P7.E06 Aspen apex cDNA Librar... 117 8e-026
gb|BI131980.1|BI131980 G128P78Y Populus cambium cDNA librar... 115 4e-025
gb|CA930944.1|CA930944 MTU2TA.P12.F04 Aspen apex cDNA Libra... 113 1e-024
gb|AI164970.1|AI164970 A071P61U Hybrid aspen plasmid librar... 112 4e-024
gb|CV272489.1|CV272489 WS0157.B21_M22 PTxN-IB-A-6 Populus t... 111 5e-024
gb|CX655663.1|CX655663 PO02038B07 Poplar SC cDNA library Po... 110 1e-023
gb|CV268506.1|CV268506 WS0205.B21_K21 PTxN-IB-N-A-11 Populu... 110 2e-023
gb|CA933814.1|CA933814 MTU3TS.P13.A11 Aspen stem cDNA Libra... 109 2e-023
gb|CX282655.1|CX282655 18-2.5.2 Populus tremula X Populus a... 109 2e-023
gb|CK103714.1|CK103714 G128P78.5pR Populus tension wood cDN... 109 3e-023
gb|CA927109.1|CA927109 MTU6CR.P5.A10 Aspen root cDNA Librar... 106 2e-022
gb|CV232951.1|CV232951 WS0199.B21_C22 PT-DX-N-A-10 Populus ... 86 5e-022
gb|BI132032.1|BI132032 G130P01Y Populus cambium cDNA librar... 103 1e-021
gb|DN502243.1|DN502243 V062A01.5pR Populus male catkins cDN... 74 5e-021
>gb|DN490449.1|DN490449 UK131TE03.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone UK131TE03 3', mRNA
sequence
Length = 667
Score = 173 bits (373), Expect = 1e-042
Identities = 62/130 (47%), Positives = 94/130 (72%)
Frame = -1 / -3
Query: 787 MAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVS 608
++ +V+SA F+ + F+N EK++ + F+ +G G G+WT+A RSTYNL+D ++
Sbjct: 551 LSTSVMSANLHDFLEIVFQNDEKTMQSWHLDGYDFWVIGYGNGQWTSAKRSTYNLVDALT 372
Query: 607 RHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPET 428
RHT+QVYP SWTA+ ++ DN GMW++RS IWERQYLG+Q Y+ V + SL +EY++P
Sbjct: 371 RHTVQVYPNSWTAIYVSLDNQGMWNLRSAIWERQYLGQQFYLRVWTQVHSLENEYDIPSN 192
Query: 427 SLRCGKVVGL 398
+LRCGK +G+
Sbjct: 191 ALRCGKAIGI 162
>gb|CV275896.1|CV275896 WS0177.B21_P21 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_P21 3', mRNA sequence
Length = 878
Score = 173 bits (372), Expect = 2e-042
Identities = 68/127 (53%), Positives = 87/127 (68%)
Frame = -1 / -1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V++A+FR + + FENPE ++ I FF VGM G+W+ ASR +YNL DT+SR T
Sbjct: 707 SVMAADFRGYAEIVFENPEDNVQSWHIDGHNFFVVGMDGGQWSPASRLSYNLRDTISRCT 528
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP SWTAV M DN GMW+VRS W RQYLG+Q Y+ V SP S RDEY +P +L
Sbjct: 527 VQVYPESWTAVYMPLDNVGMWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPTNALL 348
Query: 418 CGKVVGL 398
CG+ GL
Sbjct: 347 CGRAAGL 327
>gb|CF232662.1|CF232662 PtaJXO0014B9B0903 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 675
Score = 171 bits (367), Expect = 8e-042
Identities = 62/130 (47%), Positives = 93/130 (71%)
Frame = -1 / +3
Query: 787 MAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVS 608
++ +V+SA F+ V F+N EK++ + F+ +G G G W +A RSTYNL+D ++
Sbjct: 99 LSTSVMSANLHDFLEVVFQNDEKTMQSWHLDGYDFWVIGYGNGLWNSAKRSTYNLVDALT 278
Query: 607 RHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPET 428
RHT+QVYP+SWTA+ ++ DN GMW++RS IWERQYLG+Q Y+ V + SL +EY++P
Sbjct: 279 RHTVQVYPKSWTAIYVSLDNQGMWNMRSAIWERQYLGQQFYLRVWTQVHSLANEYDIPSN 458
Query: 427 SLRCGKVVGL 398
+LRCGK +G+
Sbjct: 459 ALRCGKAIGI 488
>gb|DT516575.1|DT516575 WS02431.B21_M23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02431_M23 3', mRNA sequence
Length = 712
Score = 168 bits (361), Expect = 5e-041
Identities = 67/125 (53%), Positives = 86/125 (68%)
Frame = -1 / -3
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V+SA FR FI + F+N E ++ I +FF VGM G+WT ASR+ YNL DTV+R T
Sbjct: 629 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTTASRARYNLRDTVARCTT 450
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 449 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLC 270
Query: 415 GKVVG 401
G+V G
Sbjct: 269 GRVRG 255
>gb|CV238057.1|CV238057 WS0125.B21_C06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0125_C06 3', mRNA sequence
Length = 697
Score = 166 bits (356), Expect = 3e-040
Identities = 66/125 (52%), Positives = 85/125 (68%)
Frame = -1 / -1
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V+SA FR FI + F+N E ++ I +FF VGM G+WT ASR+ YNL DTV+R T
Sbjct: 628 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVARCTT 449
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 448 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLC 269
Query: 415 GKVVG 401
G+ G
Sbjct: 268 GRARG 254
>gb|DN489317.1|DN489317 T023D01.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T023D01 3', mRNA sequence
Length = 745
Score = 166 bits (356), Expect = 3e-040
Identities = 66/125 (52%), Positives = 85/125 (68%)
Frame = -1 / -3
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V+SA FR FI + F+N E ++ I +FF VGM G+WT ASR+ YNL DTV+R T
Sbjct: 509 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVARCTT 330
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 329 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLC 150
Query: 415 GKVVG 401
G+ G
Sbjct: 149 GRARG 135
>gb|CF232732.1|CF232732 PtaJXO0015B7B0703 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 566
Score = 165 bits (355), Expect = 4e-040
Identities = 60/123 (48%), Positives = 87/123 (70%)
Frame = -1 / +3
Query: 766 AEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVY 587
A F+ V F+N EK++ + F+ +G G G W +A RSTYNL+D ++RHT+QVY
Sbjct: 3 ANLHDFLEVVFQNDEKTMQSWHLDGYDFWVIGYGNGLWNSAKRSTYNLVDALTRHTVQVY 182
Query: 586 PRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKV 407
P+SWTA+ ++ DN GMW++RS IWERQYLG+Q Y+ V + SL +EY++P +LRCGK
Sbjct: 183 PKSWTAIYVSLDNQGMWNMRSAIWERQYLGQQFYLRVWTQVHSLANEYDIPSNALRCGKA 362
Query: 406 VGL 398
+G+
Sbjct: 363 IGI 371
>gb|CX655574.1|CX655574 PO02036F11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02036F11 5', mRNA sequence
Length = 520
Score = 165 bits (354), Expect = 5e-040
Identities = 62/126 (49%), Positives = 85/126 (67%)
Frame = -1 / +2
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ A+FR F+ + F+N E + I +F+ VGM G WT ASR+ YNL D VSR T
Sbjct: 74 SVLGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 253
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 254 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 433
Query: 418 CGKVVG 401
CG+ +G
Sbjct: 434 CGRAIG 451
Score = 105 bits (224), Expect = 4e-022
Identities = 55/125 (44%), Positives = 66/125 (52%)
Frame = +3 / -2
Query: 402 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITAVHD 581
P LPQRR G+ YSS D +GE T +C PRYCL+Q H+P LS+ + AVHD
Sbjct: 450 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 271
Query: 582 LGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXMNXRN 761
LGYT +V R T S RLY LR A VH P +PT +K +FS F
Sbjct: 270 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 91
Query: 762 SALMT 776
SA T
Sbjct: 90 SAPKT 76
>gb|CV256643.1|CV256643 WS0244.B21_G18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_G18 3', mRNA sequence
Length = 860
Score = 164 bits (353), Expect = 7e-040
Identities = 62/126 (49%), Positives = 85/126 (67%)
Frame = -1 / -1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ A+FR F+ + F+N E + I +F+ VGM G WT ASR+ YNL D VSR T
Sbjct: 584 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 405
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 404 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 225
Query: 418 CGKVVG 401
CG+ +G
Sbjct: 224 CGRAIG 207
Score = 108 bits (230), Expect = 6e-023
Identities = 56/125 (44%), Positives = 67/125 (53%)
Frame = +3 / +1
Query: 402 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITAVHD 581
P LPQRR G+ YSS D +GE T +C PRYCL+Q H+P LS+ + AVHD
Sbjct: 208 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 387
Query: 582 LGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXMNXRN 761
LGYT +V R T S RLY LR A VH P +PT +K +FS F
Sbjct: 388 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 567
Query: 762 SALMT 776
SA MT
Sbjct: 568 SAPMT 582
>gb|DT510085.1|DT510085 WS02425.BR_I20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I20 5', mRNA sequence
Length = 837
Score = 164 bits (353), Expect = 7e-040
Identities = 62/126 (49%), Positives = 85/126 (67%)
Frame = -1 / +3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ A+FR F+ + F+N E + I +F+ VGM G WT ASR+ YNL D VSR T
Sbjct: 282 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 461
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 462 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 641
Query: 418 CGKVVG 401
CG+ +G
Sbjct: 642 CGRAIG 659
Score = 108 bits (230), Expect = 6e-023
Identities = 56/125 (44%), Positives = 67/125 (53%)
Frame = +3 / -3
Query: 402 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITAVHD 581
P LPQRR G+ YSS D +GE T +C PRYCL+Q H+P LS+ + AVHD
Sbjct: 658 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 479
Query: 582 LGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXMNXRN 761
LGYT +V R T S RLY LR A VH P +PT +K +FS F
Sbjct: 478 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 299
Query: 762 SALMT 776
SA MT
Sbjct: 298 SAPMT 284
>gb|DT514705.1|DT514705 WS02425.B21_I20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I20 3', mRNA sequence
Length = 853
Score = 164 bits (353), Expect = 7e-040
Identities = 62/126 (49%), Positives = 85/126 (67%)
Frame = -1 / -3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ A+FR F+ + F+N E + I +F+ VGM G WT ASR+ YNL D VSR T
Sbjct: 572 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 393
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 392 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 213
Query: 418 CGKVVG 401
CG+ +G
Sbjct: 212 CGRAIG 195
Score = 108 bits (230), Expect = 6e-023
Identities = 56/125 (44%), Positives = 67/125 (53%)
Frame = +3 / +1
Query: 402 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITAVHD 581
P LPQRR G+ YSS D +GE T +C PRYCL+Q H+P LS+ + AVHD
Sbjct: 196 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 375
Query: 582 LGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXMNXRN 761
LGYT +V R T S RLY LR A VH P +PT +K +FS F
Sbjct: 376 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 555
Query: 762 SALMT 776
SA MT
Sbjct: 556 SAPMT 570
>gb|DT517583.1|DT517583 WS02434.B21_L14 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02434_L14 3', mRNA sequence
Length = 829
Score = 164 bits (353), Expect = 7e-040
Identities = 62/126 (49%), Positives = 85/126 (67%)
Frame = -1 / -2
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ A+FR F+ + F+N E + I +F+ VGM G WT ASR+ YNL D VSR T
Sbjct: 579 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 400
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+ V SP S RDEY +P+ +L
Sbjct: 399 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEYPIPKNALL 220
Query: 418 CGKVVG 401
CG+ +G
Sbjct: 219 CGRAIG 202
Score = 108 bits (230), Expect = 6e-023
Identities = 56/125 (44%), Positives = 67/125 (53%)
Frame = +3 / +2
Query: 402 PTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSNVIITAVHD 581
P LPQRR G+ YSS D +GE T +C PRYCL+Q H+P LS+ + AVHD
Sbjct: 203 PMALPQRRAFLGIGYSSRGDSTGE*TRI*NC*PRYCLAQNSVLMFHIPTLSSAM*IAVHD 382
Query: 582 LGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXMNXRN 761
LGYT +V R T S RLY LR A VH P +PT +K +FS F
Sbjct: 383 LGYT*VVQRETASLRLY*LRLAGVHTPPSIPTTQKEYPLMCQLWTMFSWF*NTISTKALK 562
Query: 762 SALMT 776
SA MT
Sbjct: 563 SAPMT 577
>gb|BU832092.1|BU832092 T029C12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 780
Score = 158 bits (339), Expect = 6e-038
Identities = 59/126 (46%), Positives = 85/126 (67%)
Frame = -1 / +1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V++ +R F+ + F+N E + + +FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 136 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 315
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 316 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 495
Query: 418 CGKVVG 401
CG+ G
Sbjct: 496 CGRASG 513
>gb|CK092927.1|CK092927 G100P57.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G100P57 3', mRNA sequence
Length = 826
Score = 158 bits (339), Expect = 6e-038
Identities = 59/126 (46%), Positives = 85/126 (67%)
Frame = -1 / -1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V++ +R F+ + F+N E + + +FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 763 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 584
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 583 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 404
Query: 418 CGKVVG 401
CG+ G
Sbjct: 403 CGRASG 386
>gb|DT512199.1|DT512199 WS02418.B21_K02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_K02 3', mRNA sequence
Length = 927
Score = 158 bits (339), Expect = 6e-038
Identities = 59/126 (46%), Positives = 85/126 (67%)
Frame = -1 / -3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V++ +R F+ + F+N E + + +FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 763 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 584
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 583 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 404
Query: 418 CGKVVG 401
CG+ G
Sbjct: 403 CGRASG 386
>gb|DT520978.1|DT520978 WS02033.B21_B04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02033_B04 3', mRNA sequence
Length = 868
Score = 158 bits (339), Expect = 6e-038
Identities = 59/126 (46%), Positives = 85/126 (67%)
Frame = -1 / -2
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V++ +R F+ + F+N E + + +FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 606 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 427
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 426 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 247
Query: 418 CGKVVG 401
CG+ G
Sbjct: 246 CGRASG 229
>gb|DT525144.1|DT525144 WS02044.C21_J01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02044_J01 3', mRNA sequence
Length = 868
Score = 158 bits (339), Expect = 6e-038
Identities = 59/126 (46%), Positives = 85/126 (67%)
Frame = -1 / -2
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V++ +R F+ + F+N E + + +FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 606 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 427
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 426 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 247
Query: 418 CGKVVG 401
CG+ G
Sbjct: 246 CGRASG 229
>gb|BP934231.1|BP934231 BP934231 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-062_A03.r 3', mRNA sequence
Length = 706
Score = 157 bits (337), Expect = 1e-037
Identities = 59/126 (46%), Positives = 84/126 (66%)
Frame = -1 / -3
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V++ +R F+ + F N E + + +FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 701 SVLTLPYRAFVEIVFRNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 522
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
IQVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L
Sbjct: 521 IQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALL 342
Query: 418 CGKVVG 401
CG+ G
Sbjct: 341 CGRASG 324
>gb|CV130787.1|CV130787 B9SP10h10 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 720
Score = 153 bits (328), Expect = 2e-036
Identities = 61/110 (55%), Positives = 74/110 (67%)
Frame = -1 / +1
Query: 727 PEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDN 548
PE ++ I FF VGM G+W+ ASR +YNL DT+SR T+QVYP SWTAV M DN
Sbjct: 37 PEDNVQSWHIDGHNFFVVGMDGGQWSPASRLSYNLRDTISRCTVQVYPESWTAVYMPLDN 216
Query: 547 AGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGL 398
GMW+VRS W RQYLG+Q Y+ V SP S RDEY +P +L CG+ GL
Sbjct: 217 VGMWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPTNALLCGQAAGL 366
>gb|CN523502.1|CN523502 GQ015M07.T3_B08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_B08 5', mRNA sequence
Length = 777
Score = 151 bits (325), Expect = 5e-036
Identities = 55/125 (44%), Positives = 82/125 (65%)
Frame = -1 / +3
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V++ +R ++ + F+N E + + +FF VGM G+WT ASR YNL D V+R T
Sbjct: 246 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 425
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 426 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 605
Query: 415 GKVVG 401
G+ G
Sbjct: 606 GRASG 620
>gb|DN492283.1|DN492283 V062A01.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V062A01 3', mRNA sequence
Length = 750
Score = 151 bits (325), Expect = 5e-036
Identities = 55/125 (44%), Positives = 82/125 (65%)
Frame = -1 / -2
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V++ +R ++ + F+N E + + +FF VGM G+WT ASR YNL D V+R T
Sbjct: 740 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 561
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 560 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 381
Query: 415 GKVVG 401
G+ G
Sbjct: 380 GRASG 366
>gb|DT476539.1|DT476539 WS01229.B21_P03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_P03 3', mRNA sequence
Length = 869
Score = 151 bits (325), Expect = 5e-036
Identities = 55/125 (44%), Positives = 82/125 (65%)
Frame = -1 / -1
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V++ +R ++ + F+N E + + +FF VGM G+WT ASR YNL D V+R T
Sbjct: 749 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 570
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 569 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 390
Query: 415 GKVVG 401
G+ G
Sbjct: 389 GRASG 375
>gb|DT485142.1|DT485142 WS02527.B21_G13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_G13 3', mRNA sequence
Length = 904
Score = 151 bits (325), Expect = 5e-036
Identities = 55/125 (44%), Positives = 82/125 (65%)
Frame = -1 / -2
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V++ +R ++ + F+N E + + +FF VGM G+WT ASR YNL D V+R T
Sbjct: 744 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 565
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 564 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 385
Query: 415 GKVVG 401
G+ G
Sbjct: 384 GRASG 370
>gb|DT511310.1|DT511310 WS02416.B21_B23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_B23 3', mRNA sequence
Length = 914
Score = 151 bits (325), Expect = 5e-036
Identities = 55/125 (44%), Positives = 82/125 (65%)
Frame = -1 / -2
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V++ +R ++ + F+N E + + +FF VGM G+WT ASR YNL D V+R T
Sbjct: 724 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 545
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 544 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 365
Query: 415 GKVVG 401
G+ G
Sbjct: 364 GRASG 350
>gb|DT518220.1|DT518220 WS02436.B21_I16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02436_I16 3', mRNA sequence
Length = 915
Score = 151 bits (325), Expect = 5e-036
Identities = 55/125 (44%), Positives = 82/125 (65%)
Frame = -1 / -3
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V++ +R ++ + F+N E + + +FF VGM G+WT ASR YNL D V+R T
Sbjct: 724 VLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARCTT 545
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP++WTA+ + DN GMW++R+ W RQYLG+Q Y+ V + SLRDE+ +P+ +L C
Sbjct: 544 QVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEFPIPKNALLC 365
Query: 415 GKVVG 401
G+ G
Sbjct: 364 GRASG 350
>gb|CF233492.1|CF233492 PtaJXO0024C2C0206 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 757
Score = 148 bits (318), Expect = 4e-035
Identities = 57/112 (50%), Positives = 75/112 (66%)
Frame = -1 / +2
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ A+FR F+ + F+N E + I +F+ VGM G WT ASR+ YNL D VSR T
Sbjct: 209 SVLGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 388
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEY 443
QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+ V SP S RDEY
Sbjct: 389 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPRDEY 544
>gb|CB240309.1|CB240309 PopSC00287 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00287, mRNA sequence
Length = 473
Score = 148 bits (317), Expect = 6e-035
Identities = 56/114 (49%), Positives = 77/114 (67%)
Frame = -1 / +2
Query: 742 VXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVM 563
+ F+N E + + +FF VGM G+WT ASR+ YNL D VSR TIQVYP++WTA+
Sbjct: 5 IVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCTIQVYPKAWTAIY 184
Query: 562 MTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVG 401
+ DN GMW++R+ W RQYLG+Q Y+ V + SLRDEY +P+ +L CG+ G
Sbjct: 185 IPLDNVGMWNLRTEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRASG 346
>gb|BU831146.1|BU831146 T017G12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 695
Score = 142 bits (304), Expect = 4e-033
Identities = 53/96 (55%), Positives = 70/96 (72%)
Frame = -1 / +3
Query: 688 AFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWER 509
+FF VGM G+WT ASR+ YNL D VSR TIQVYP++WTA+ + DN GMW++R+ W R
Sbjct: 51 SFFVVGMDGGQWTTASRNQYNLRDGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWAR 230
Query: 508 QYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVG 401
QYLG+Q Y+ V + SLRDEY +P+ +L CG+ G
Sbjct: 231 QYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRASG 338
>gb|CA824413.1|CA824413 R41F09 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 601
Score = 140 bits (301), Expect = 1e-032
Identities = 54/154 (35%), Positives = 92/154 (59%)
Frame = -1 / +1
Query: 802 TAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNL 623
T P KMA +VI+ +R F+ V +N + + + A F VGM G+WT SR TYN
Sbjct: 121 TGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNK 300
Query: 622 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEY 443
D ++R T+Q YP +WTA++++ DN G+W++R+ + YLG++ Y+ +++PE + + E
Sbjct: 301 WDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYIRIVNPEETNKTEL 480
Query: 442 NMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVL 341
+P+ +L CG++ L P S+ +R+ L
Sbjct: 481 PIPDNALFCGELSKLQKPEDISFAVSITGNRSKL 582
>gb|CV274281.1|CV274281 WS0172.B21_M11 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0172_M11 3', mRNA sequence
Length = 903
Score = 140 bits (301), Expect = 1e-032
Identities = 54/154 (35%), Positives = 92/154 (59%)
Frame = -1 / -1
Query: 802 TAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNL 623
T P KMA +VI+ +R F+ V +N + + + A F VGM G+WT SR TYN
Sbjct: 777 TGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNK 598
Query: 622 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEY 443
D ++R T+Q YP +WTA++++ DN G+W++R+ + YLG++ Y+ +++PE + + E
Sbjct: 597 WDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYIRIVNPEETNKTEL 418
Query: 442 NMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVL 341
+P+ +L CG++ L P S+ +R+ L
Sbjct: 417 PIPDNALFCGELSKLQKPEDISFAASITGNRSKL 316
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence
Length = 111678
Score = 100 bits (212), Expect(3) = 1e-032
Identities = 36/66 (54%), Positives = 47/66 (71%)
Frame = -1 / -1
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L
Sbjct: 49368 MQVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALL 49189
Query: 418 CGKVVG 401
CG+ G
Sbjct: 49188 CGRARG 49171
Score = 42.8 bits (87), Expect(3) = 1e-032
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1 / -3
Query: 682 FAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPR 581
+ M G+WT ASR+ YNL DTV+R T QV+ +
Sbjct: 49567 YVSSMDGGQWTPASRARYNLRDTVARCTTQVWTK 49466
Score = 35.4 bits (71), Expect(3) = 1e-032
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1 / -2
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVG 671
V+SA FR FI + F+N E ++ I +FF VG
Sbjct: 49763 VMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVG 49659
>gb|AJ777809.1|AJ777809 AJ777809 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035D05F1, mRNA sequence
Length = 736
Score = 140 bits (300), Expect = 1e-032
Identities = 54/154 (35%), Positives = 92/154 (59%)
Frame = -1 / +1
Query: 802 TAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNL 623
T P KMA +VI+ +R F+ V +N + + + A F VGM G+WT SR TYN
Sbjct: 178 TGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNK 357
Query: 622 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEY 443
D ++R T+Q YP +WT ++++ DN G+W++R+ + YLG++ YV +++PE++ + E
Sbjct: 358 WDGIARSTVQAYPGAWTTILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEKTNKTEL 537
Query: 442 NMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVL 341
+P+ +L CG++ L P S+ +R+ L
Sbjct: 538 PIPDNALFCGELSKLQKPEDISFAVSITGNRSKL 639
>gb|BI131350.1|BI131350 G119P62Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 389
Score = 138 bits (295), Expect = 7e-032
Identities = 51/96 (53%), Positives = 67/96 (69%)
Frame = -1 / +1
Query: 688 AFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWER 509
+FF VGM G+WT ASR YNL D V+R T QVYP +WTA+ + DN GMW++R+ W R
Sbjct: 34 SFFVVGMDGGQWTTASRDQYNLRDAVARCTTQVYPNAWTAIYIPLDNVGMWNLRTEFWAR 213
Query: 508 QYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVG 401
QYLG+Q Y+ V + SLRDEY +P+ +L CG+ G
Sbjct: 214 QYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRASG 321
>gb|DT508892.1|DT508892 WS02422.BR_D15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_D15 5', mRNA sequence
Length = 506
Score = 138 bits (295), Expect = 7e-032
Identities = 52/104 (50%), Positives = 70/104 (67%)
Frame = -1 / +1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ A+FR F+ + F+N E + I +F+ VGM G WT ASR+ YNL D VSR T
Sbjct: 187 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 366
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISP 467
QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+ V SP
Sbjct: 367 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 498
>gb|DT513501.1|DT513501 WS02422.B21_D15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_D15 3', mRNA sequence
Length = 507
Score = 137 bits (293), Expect = 1e-031
Identities = 52/103 (50%), Positives = 70/103 (67%)
Frame = -1 / -1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V+ A+FR F+ + F+N E + I +F+ VGM G WT ASR+ YNL D VSR T
Sbjct: 321 SVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCT 142
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVIS 470
QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+SV S
Sbjct: 141 TQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMSVYS 13
>gb|BU832276.1|BU832276 T031F10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 719
Score = 135 bits (290), Expect = 3e-031
Identities = 53/155 (34%), Positives = 91/155 (58%)
Frame = -1 / +2
Query: 802 TAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNL 623
T +KM +VI+ +R F+ V +N + + + A F VGM G+WT SR TYN
Sbjct: 251 TGSSKMETSVINGTYRGFMEVILQNNDTKMQSYHLSGYAVFVVGMDYGEWTENSRGTYNK 430
Query: 622 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEY 443
D ++R T+QVYP +WTA++++ DN G+W++R+ + YLG++ YV +++PE + + E
Sbjct: 431 WDGIARSTVQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEDTNKTEL 610
Query: 442 NMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVLY 338
+P+ +L CG + P S+ +R+ L+
Sbjct: 611 PVPDNALFCGALSKFQKPQDISFAVSITGNRSKLF 715
>gb|BU812401.1|BU812401 UL95TH09 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 506
Score = 133 bits (286), Expect = 1e-030
Identities = 49/95 (51%), Positives = 65/95 (68%)
Frame = -1 / +3
Query: 685 FFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQ 506
FF VGM G+WT A R YNL D V+R T QVYP +WTA+ + DN GMW++R+ W RQ
Sbjct: 3 FFVVGMDGGQWTTAGRDQYNLRDAVARCTTQVYPNAWTAIYIPLDNVGMWNLRTEFWARQ 182
Query: 505 YLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVG 401
YLG+Q Y+ V + SLRDE+ +P+ +L CG+ G
Sbjct: 183 YLGQQFYLRVYTDSTSLRDEFPIPKNALLCGRASG 287
>gb|DT518576.1|DT518576 WS02438.B21_J08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_J08 3', mRNA sequence
Length = 860
Score = 133 bits (286), Expect = 1e-030
Identities = 53/157 (33%), Positives = 91/157 (57%)
Frame = -1 / -1
Query: 802 TAPTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNL 623
T +KM +VI+ +R F+ V +N + + + A F VGM G+WT SR TYN
Sbjct: 803 TGSSKMETSVINGTYRGFMEVILQNNDTKMQSYHLSGYAVFVVGMDYGEWTENSRGTYNK 624
Query: 622 LDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEY 443
D ++R T+QVYP +WTA++++ DN G+W++R+ + YLG++ YV +++PE + + E
Sbjct: 623 WDGIARSTVQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEETNKTEL 444
Query: 442 NMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVLYTT 332
+P+ +L CG + P S+ + + L+ T
Sbjct: 443 PIPDNALFCGALGKFQKPEDISFAVSITCNGSKLFFT 333
>gb|DN483723.1|DN483723 PSO202D09 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 1202
Score = 118 bits (253), Expect(2) = 2e-029
Identities = 44/94 (46%), Positives = 61/94 (64%)
Frame = -1 / +2
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V++ +R F+ + F+N E + + FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 551 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYCFFVVGMDGGQWTTASRNQYNLRDGVSRCT 730
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLG 497
IQVYP+ WTA+ + DN GMW++ + W RQYLG
Sbjct: 731 IQVYPKXWTAIYIPLDNVGMWNLXTEFWARQYLG 832
Score = 30.9 bits (61), Expect(2) = 2e-029
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 487 YVSVISPERSLRDEYNMPETSLRCGKVVG 401
Y+ V + SLRDEY +P+ +L G+ G
Sbjct: 841 YLRVYTDSTSLRDEYPIPKXALLXGRAXG 927
>gb|AI164321.1|AI164321 A059P32U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 452
Score = 116 bits (248), Expect(2) = 9e-029
Identities = 40/63 (63%), Positives = 53/63 (84%)
Frame = -1 / +1
Query: 685 FFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQ 506
F+ +G G G+WT+A RSTYNL+D ++RHT+QVYP SWTA+ ++ DN GMW++RS IWERQ
Sbjct: 40 FWVIGYGNGQWTSAKRSTYNLVDALTRHTVQVYPNSWTAIYVSLDNQGMWNLRSAIWERQ 219
Query: 505 YLG 497
YLG
Sbjct: 220 YLG 228
Score = 30.9 bits (61), Expect(2) = 9e-029
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1 / +2
Query: 475 ISPERSLRDEYNMPETSLRCGK 410
+ SL +EY++P +LRCGK
Sbjct: 248 LDSSHSLENEYDIPSNALRCGK 313
>gb|DT482101.1|DT482101 WS02533.BR_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_O14 5', mRNA sequence
Length = 802
Score = 123 bits (264), Expect = 1e-027
Identities = 46/111 (41%), Positives = 76/111 (68%)
Frame = -1 / +1
Query: 796 PTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLD 617
P K+ ++I+ F+ F+ + F+N + ++ + AFF VGM G WT SRSTYN D
Sbjct: 202 PPKVDTSLINGTFKGFMEIIFQNNDTAVQSYHMDGYAFFVVGMDFGVWTENSRSTYNKWD 381
Query: 616 TVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPE 464
V+R T QV+P +WTA++++ DNAG+W++RS + YLG+++Y+S+++PE
Sbjct: 382 GVARSTTQVFPGAWTAILVSLDNAGIWNLRSENLDSWYLGQEVYLSIMNPE 534
>gb|DT487515.1|DT487515 WS02533.B21_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_O14 3', mRNA sequence
Length = 877
Score = 123 bits (264), Expect = 1e-027
Identities = 46/111 (41%), Positives = 76/111 (68%)
Frame = -1 / -3
Query: 796 PTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLD 617
P K+ ++I+ F+ F+ + F+N + ++ + AFF VGM G WT SRSTYN D
Sbjct: 683 PPKVDTSLINGTFKGFMEIIFQNNDTAVQSYHMDGYAFFVVGMDFGVWTENSRSTYNKWD 504
Query: 616 TVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPE 464
V+R T QV+P +WTA++++ DNAG+W++RS + YLG+++Y+S+++PE
Sbjct: 503 GVARSTTQVFPGAWTAILVSLDNAGIWNLRSENLDSWYLGQEVYLSIMNPE 351
>gb|DN484355.1|DN484355 G130P50.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G130P50 3', mRNA sequence
Length = 685
Score = 121 bits (259), Expect = 6e-027
Identities = 47/137 (34%), Positives = 80/137 (58%)
Frame = -1 / -3
Query: 751 FIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
F+ V +N + + + A F VGM G+WT SR TYN D ++R T+Q YP +WT
Sbjct: 680 FMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWT 501
Query: 571 AVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPM 392
A++++ DN G+W++R+ + YLG++ YV +++PE + + E +P+ +L CG++ L
Sbjct: 500 AILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEETNKTELPIPDNALFCGELSKLQK 321
Query: 391 PPSYRAV*SVDRSRTVL 341
P S +R+ L
Sbjct: 320 PEDISFAVSTTGNRSKL 270
>gb|CV230926.1|CV230926 WS0193.B21_A09 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_A09 3', mRNA sequence
Length = 438
Score = 119 bits (254), Expect = 3e-026
Identities = 43/77 (55%), Positives = 56/77 (72%)
Frame = -1 / -3
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNL D VSR T QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+ V SP S R
Sbjct: 433 YNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPR 254
Query: 451 DEYNMPETSLRCGKVVG 401
DEY +P+ +L CG+ +G
Sbjct: 253 DEYPIPKNALLCGRAIG 203
>gb|CA931453.1|CA931453 MTU2TA.P7.E06 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 580
Score = 117 bits (251), Expect = 8e-026
Identities = 50/149 (33%), Positives = 82/149 (55%)
Frame = -1 / -1
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+VI+A + FI + + + + + +FF VGM G W+ SR +YN D +SR T
Sbjct: 580 SVINATSKGFIEIILQTNDTRMQSFHMNGYSFFVVGMDWGIWSENSRGSYNKWDAISRST 401
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
++VYP WTAV+ + DNAG+W++R +R YLG++ Y+ +I+PE + E P L
Sbjct: 400 VEVYPGGWTAVLASLDNAGVWNLRVENLDRWYLGQETYMRIINPEENGETEMPPPNNVLY 221
Query: 418 CGKVVGLPMPPSYRAV*SVDRSRTVLYTT 332
CG + S+++ S+ L+ T
Sbjct: 220 CGALASKQQDLSHKSGASILHGNPNLFFT 134
>gb|BI131980.1|BI131980 G128P78Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 314
Score = 115 bits (246), Expect = 4e-025
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = -1 / +1
Query: 631 YNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLR 452
YNL D VSR T QVYP+SWTA+ + DN GMW++R+ W RQYLG+Q Y+ V SP S R
Sbjct: 1 YNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSPVESPR 180
Query: 451 DEYNMPETSLRCGKVV 404
DEY +P+ +L CG+ +
Sbjct: 181 DEYPIPKNALLCGRAL 228
>gb|CA930944.1|CA930944 MTU2TA.P12.F04 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 438
Score = 113 bits (242), Expect = 1e-024
Identities = 43/107 (40%), Positives = 68/107 (63%)
Frame = -1 / +2
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+VI+A F+ FI + +N + + + +FF VGM G W+ SR +YN D +SR T
Sbjct: 95 SVINATFKGFIEIILQNNDTRMQSFHMNGYSFFVVGMDWGIWSENSRGSYNKWDAISRST 274
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERS 458
++VYP WTAV+ + DNAG+W++R +R YLG+ Y+ +I+PE +
Sbjct: 275 VEVYPGGWTAVLASLDNAGVWNLRVENLDRWYLGQDTYMRIINPEEN 415
>gb|AI164970.1|AI164970 A071P61U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 384
Score = 112 bits (239), Expect = 4e-024
Identities = 39/94 (41%), Positives = 65/94 (69%)
Frame = -1 / +2
Query: 688 AFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWER 509
A F VGM G+WT SR TYN D ++R T+Q YP +WTA++++ DN G+W++R+ +
Sbjct: 32 AVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDS 211
Query: 508 QYLGEQLYVSVISPERSLRDEYNMPETSLRCGKV 407
YLG++ YV +++PE + + E +P+ +L CG++
Sbjct: 212 WYLGQETYVRIVNPEETNKTELPIPDNALFCGEL 313
>gb|CV272489.1|CV272489 WS0157.B21_M22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0157_M22 3', mRNA sequence
Length = 652
Score = 111 bits (238), Expect = 5e-024
Identities = 41/112 (36%), Positives = 71/112 (63%)
Frame = -1 / -1
Query: 676 VGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLG 497
VGM G+WT SR TYN D ++R T+Q YP +WTA++++ DN G+W++R+ + YLG
Sbjct: 649 VGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDSWYLG 470
Query: 496 EQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVL 341
++ Y+ +++PE + + E +P+ +L CG++ L P S+ +R+ L
Sbjct: 469 QETYIRIVNPEETNKTELPIPDNALFCGELSKLQKPEDISFAASITGNRSKL 314
>gb|CX655663.1|CX655663 PO02038B07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02038B07 5', mRNA sequence
Length = 576
Score = 110 bits (235), Expect = 1e-023
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = -1 / +2
Query: 778 NVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHT 599
+V++ +R F+ + F+N E + + +FF VGM G+WT ASR+ YNL D VSR T
Sbjct: 311 SVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCT 490
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIW 515
IQVYP++WTA+ + DN GMW++R+ W
Sbjct: 491 IQVYPKAWTAIYIPLDNVGMWNLRTEFW 574
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 337,734,637
Number of Sequences: 369679
Number of extensions: 4153788
Number of successful extensions: 51089
Number of sequences better than 1.0e-020: 64
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 12144895000
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)