TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306429.2.4
(806 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library... 246 1e-064
gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid lib... 233 1e-060
gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus... 232 2e-060
gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Popul... 232 2e-060
gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Popu... 232 2e-060
gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA librar... 216 1e-055
gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Popul... 158 9e-050
gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Popul... 193 2e-048
gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus t... 193 2e-048
gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated wi... 186 2e-046
gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA librar... 138 6e-046
gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated wit... 179 2e-044
gb|CK102593.1|CK102593 G084P08.5pR Populus tension wood cDN... 146 2e-041
gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus t... 88 2e-039
gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Popu... 88 2e-039
gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus t... 88 2e-039
gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA libr... 88 2e-039
gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus t... 88 2e-038
gb|CV130609.1|CV130609 B9SP06h03 Populus stem seasonal libr... 88 3e-038
gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Po... 140 9e-033
gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populu... 90 5e-032
gb|BP932598.1|BP932598 BP932598 full-length enriched poplar... 82 1e-029
gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Po... 90 5e-029
gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus tricho... 110 1e-028
gb|CX174556.1|CX174556 D10_69-87_08.ab1 leaf inoculated wit... 126 2e-028
gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leave... 82 3e-027
gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichoca... 80 4e-027
gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA librar... 89 6e-027
gb|BU883902.1|BU883902 R003A05 Populus root cDNA library Po... 120 1e-026
gb|CK092448.1|CK092448 G084P08.3pR Populus tension wood cDN... 114 9e-025
gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDN... 62 9e-025
gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated wit... 80 2e-024
gb|BU835778.1|BU835778 T078E10 Populus apical shoot cDNA li... 85 2e-024
gb|CV235854.1|CV235854 WS01221.B21_N19 PT-GT-FL-A-3 Populus... 111 6e-024
gb|CX657346.1|CX657346 PO02042F10 Poplar SC cDNA library Po... 111 6e-024
gb|CV273187.1|CV273187 WS0171.B21_P05 PTxD-NR-A-8 Populus t... 90 5e-023
gb|CA927840.1|CA927840 MTU6TR.P13.E11 Aspen root cDNA Libra... 105 4e-022
gb|BU810699.1|BU810699 UL74PC01 Populus leaf cDNA library P... 103 1e-021
gb|DN485248.1|DN485248 M122A11.3pR Populus female catkins c... 64 2e-021
gb|CX657290.1|CX657290 PO02039B10 Poplar SC cDNA library Po... 101 5e-021
gb|BP933409.1|BP933409 BP933409 full-length enriched poplar... 82 5e-021
>gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 617
Score = 246 bits (532), Expect = 1e-064
Identities = 89/145 (61%), Positives = 116/145 (80%)
Frame = +3 / +3
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y DW V + + +NG PIGP+ANS WLY P GMY V Y+KE+YGNPTI ++ENGMD P
Sbjct: 150 YQQDWNVGFAYKKNGVPIGPRANSNWLYNVPWGMYKAVMYIKERYGNPTIILSENGMDDP 329
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
GN TR + L D TRV ++++Y+ QLKKA D+GAN+AGYFAWSLLDNFEW +GY+S+FGIV
Sbjct: 330 GNFTRSKALHDTTRVGYFKAYLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYTSRFGIV 509
Query: 414 YVDFNTLERHPKASAYWFRDMLQKH 488
YVD+ L+R+PK SAYWF+ +L+++
Sbjct: 510 YVDYTNLKRYPKMSAYWFKKLLERN 584
Score = 128 bits (274), Expect = 5e-029
Identities = 72/128 (56%), Positives = 78/128 (60%)
Frame = -2 / -2
Query: 478 SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWP 299
S LNQ*AD G+ ++ ST TMPNL+ P HSKLS D AK*PA AP S AFFS
Sbjct: 574 SSFLNQ*ADILGYLFRLV*STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAPSSAAFFS*V 395
Query: 298 M*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEF 119
* L TLV S + RVK PG SIPFS IVGFP S T YIP G +*S LEF
Sbjct: 394 K*ALK*PTLVVSCNAFERVKLPGSSIPFSDSIIVGFP*RSFMYITALYIPHGTL*SQLEF 215
Query: 118 ACGPIGLP 95
A GPIG P
Sbjct: 214 ALGPIGTP 191
>gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A001P37 3', mRNA sequence
Length = 816
Score = 233 bits (503), Expect = 1e-060
Identities = 84/145 (57%), Positives = 112/145 (77%)
Frame = +3 / -2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y DW + + + G IGP+ANS WLY P GMY V Y+KE+YGNPT+ ++ENGMD P
Sbjct: 536 YQQDWNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDP 357
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
GNLTR + L+D TR+ +Y++Y+ QLKKA D GAN+ GYFAWSLLDNFEW GY+S+FGIV
Sbjct: 356 GNLTRSKALQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIV 177
Query: 414 YVDFNTLERHPKASAYWFRDMLQKH 488
YVD++ L+R+PK SA WF+ +L+++
Sbjct: 176 YVDYSNLKRYPKMSANWFKHLLERN 102
Score = 115 bits (246), Expect = 3e-025
Identities = 67/125 (53%), Positives = 73/125 (58%)
Frame = -2 / +1
Query: 469 LNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*L 290
LNQ AD FG+ + ST T+PNL+ P HSKLS DQAK P AP S AFFS *
Sbjct: 121 LNQLADIFGYLLRLE*STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*A 300
Query: 289 L*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACG 110
L* LV S RV+ PG SIPFS IVGFP SL T YIP G +*S EFA G
Sbjct: 301 L**PILVVSCNALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALG 480
Query: 109 PIGLP 95
PI P
Sbjct: 481 PISTP 495
>gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0223_P11 3', mRNA sequence
Length = 667
Score = 232 bits (501), Expect = 2e-060
Identities = 83/145 (57%), Positives = 112/145 (77%)
Frame = +3 / -2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y DW + + + G IGP+ANS WLY P GMY V Y+KE+YGNPT+ ++ENGMD P
Sbjct: 534 YQQDWNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDP 355
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
GNLTR + ++D TR+ +Y++Y+ QLKKA D GAN+ GYFAWSLLDNFEW GY+S+FGIV
Sbjct: 354 GNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIV 175
Query: 414 YVDFNTLERHPKASAYWFRDMLQKH 488
YVD++ L+R+PK SA WF+ +L+++
Sbjct: 174 YVDYSNLKRYPKMSANWFKHLLERN 100
Score = 114 bits (243), Expect = 9e-025
Identities = 67/125 (53%), Positives = 73/125 (58%)
Frame = -2 / +2
Query: 469 LNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*L 290
LNQ AD FG+ + ST T+PNL+ P HSKLS DQAK P AP S AFFS *
Sbjct: 119 LNQLADIFGYLLRLE*STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*A 298
Query: 289 L*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACG 110
L* LV S RV+ PG SIPFS IVGFP SL T YIP G +*S EFA G
Sbjct: 299 L**PILVVSCIALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALG 478
Query: 109 PIGLP 95
PI P
Sbjct: 479 PISTP 493
>gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 5', mRNA sequence
Length = 673
Score = 232 bits (501), Expect = 2e-060
Identities = 83/145 (57%), Positives = 112/145 (77%)
Frame = +3 / +2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y DW + + + G IGP+ANS WLY P GMY V Y+KE+YGNPT+ ++ENGMD P
Sbjct: 137 YQQDWNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDP 316
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
GNLTR + ++D TR+ +Y++Y+ QLKKA D GAN+ GYFAWSLLDNFEW GY+S+FGIV
Sbjct: 317 GNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIV 496
Query: 414 YVDFNTLERHPKASAYWFRDMLQKH 488
YVD++ L+R+PK SA WF+ +L+++
Sbjct: 497 YVDYSNLKRYPKMSANWFKHLLERN 571
Score = 114 bits (243), Expect = 9e-025
Identities = 67/125 (53%), Positives = 73/125 (58%)
Frame = -2 / -2
Query: 469 LNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*L 290
LNQ AD FG+ + ST T+PNL+ P HSKLS DQAK P AP S AFFS *
Sbjct: 552 LNQLADIFGYLLRLE*STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*A 373
Query: 289 L*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACG 110
L* LV S RV+ PG SIPFS IVGFP SL T YIP G +*S EFA G
Sbjct: 372 L**PILVVSCIALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALG 193
Query: 109 PIGLP 95
PI P
Sbjct: 192 PISTP 178
>gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 3', mRNA sequence
Length = 673
Score = 232 bits (501), Expect = 2e-060
Identities = 83/145 (57%), Positives = 112/145 (77%)
Frame = +3 / -2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y DW + + + G IGP+ANS WLY P GMY V Y+KE+YGNPT+ ++ENGMD P
Sbjct: 537 YQQDWNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDP 358
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
GNLTR + ++D TR+ +Y++Y+ QLKKA D GAN+ GYFAWSLLDNFEW GY+S+FGIV
Sbjct: 357 GNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIV 178
Query: 414 YVDFNTLERHPKASAYWFRDMLQKH 488
YVD++ L+R+PK SA WF+ +L+++
Sbjct: 177 YVDYSNLKRYPKMSANWFKHLLERN 103
Score = 114 bits (243), Expect = 9e-025
Identities = 67/125 (53%), Positives = 73/125 (58%)
Frame = -2 / +2
Query: 469 LNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*L 290
LNQ AD FG+ + ST T+PNL+ P HSKLS DQAK P AP S AFFS *
Sbjct: 122 LNQLADIFGYLLRLE*STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*A 301
Query: 289 L*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACG 110
L* LV S RV+ PG SIPFS IVGFP SL T YIP G +*S EFA G
Sbjct: 302 L**PILVVSCIALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALG 481
Query: 109 PIGLP 95
PI P
Sbjct: 482 PISTP 496
>gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 476
Score = 216 bits (466), Expect = 1e-055
Identities = 79/128 (61%), Positives = 105/128 (82%)
Frame = +3 / +1
Query: 105 IGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRF 284
IGP+ANS WLY P GMY V Y+KE+YGNPT+ ++ENGMD PGNLTR + L+D TR+ +
Sbjct: 4 IGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLTRSKALQDTTRIGY 183
Query: 285 YRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYW 464
Y++Y+ QLKKA GAN+ GYFAWSLLDNFEW +GY+S+FGIVYVD++ L+R+PK SA W
Sbjct: 184 YKAYLSQLKKAAVDGANLVGYFAWSLLDNFEWTSGYTSRFGIVYVDYSNLKRYPKMSANW 363
Query: 465 FRDMLQKH 488
F+ +L+++
Sbjct: 364 FKHLLERN 387
Score = 110 bits (234), Expect = 1e-023
Identities = 64/122 (52%), Positives = 72/122 (59%)
Frame = -2 / -1
Query: 469 LNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*L 290
LNQ AD FG+ + ST T+PNL+ P HSKLS DQAK P AP + AFFS *
Sbjct: 368 LNQLADIFGYLLRLE*STYTIPNLEV*PDVHSKLSSNDQAKYPTKLAPSTAAFFS*DK*A 189
Query: 289 L*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACG 110
L* LV S RV+ PG SIPFS IVGFP SL T Y+P G +*S EFA G
Sbjct: 188 L**PILVVSCNALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYMPHGTL*SQ*EFALG 9
Query: 109 PI 104
PI
Sbjct: 8 PI 3
>gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02035_N05 3', mRNA sequence
Length = 894
Score = 158 bits (340), Expect(2) = 9e-050
Identities = 56/91 (61%), Positives = 77/91 (84%)
Frame = +3 / -3
Query: 216 NGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYS 395
+GMD PGN TR + L D TR+ ++++Y+ QLKKA D+GAN+AGYFAWSLLDNFEW +GY+
Sbjct: 373 SGMDDPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYT 194
Query: 396 SKFGIVYVDFNTLERHPKASAYWFRDMLQKH 488
S+FGIVYVD+ L+R+PK SAYWF+ +L+++
Sbjct: 193 SRFGIVYVDYTNLKRYPKMSAYWFKKLLERN 101
Score = 58.8 bits (122), Expect(2) = 9e-050
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +3 / -1
Query: 129 WLYIAPTGMYGCVNYLKEKYGNPTIYITENGM 224
WLY P GMY V Y+KE+YGNPTI ++ENGM
Sbjct: 585 WLYNVPWGMYKAVMYIKERYGNPTIILSENGM 490
>gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_E17 3', mRNA sequence
Length = 832
Score = 193 bits (415), Expect = 2e-048
Identities = 69/111 (62%), Positives = 93/111 (83%)
Frame = +3 / -3
Query: 156 YGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGAN 335
Y V Y+KE+YGNPTI ++ENGMD PGN TR + L D TR+ ++++Y+ QLKKA D+GAN
Sbjct: 830 YKAVMYIKERYGNPTIILSENGMDDPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGAN 651
Query: 336 VAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH 488
+AGYFAWSLLDNFEW +GY+S+FGIVYVD+ L+R+PK SAYWF+ +L+++
Sbjct: 650 LAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTNLKRYPKMSAYWFKKLLERN 498
>gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_P15 3', mRNA sequence
Length = 479
Score = 193 bits (415), Expect = 2e-048
Identities = 69/111 (62%), Positives = 93/111 (83%)
Frame = +3 / -2
Query: 156 YGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGAN 335
Y V Y+KE+YGNPTI ++ENGMD PGN TR + L D TR+ ++++Y+ QLKKA D+GAN
Sbjct: 478 YKAVMYIKERYGNPTIILSENGMDDPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGAN 299
Query: 336 VAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH 488
+AGYFAWSLLDNFEW +GY+S+FGIVYVD+ L+R+PK SAYWF+ +L+++
Sbjct: 298 LAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTNLKRYPKMSAYWFKKLLERN 146
>gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 443
Score = 186 bits (400), Expect = 2e-046
Identities = 66/108 (61%), Positives = 91/108 (84%)
Frame = +3 / +3
Query: 165 VNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAG 344
V Y+KE+YGNPT+ ++ENGMD PGNLTR + ++D TR+ +Y++Y+ QLKKA D GAN+ G
Sbjct: 12 VMYIKERYGNPTMILSENGMDDPGNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANMVG 191
Query: 345 YFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH 488
YFAWSLLDNFEW GY+S+FGIVYVD++ L+R+PK SA WF+ +L+++
Sbjct: 192 YFAWSLLDNFEWRLGYTSRFGIVYVDYSNLKRYPKMSANWFKHLLERN 335
>gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 399
Score = 138 bits (297), Expect(2) = 6e-046
Identities = 51/76 (67%), Positives = 64/76 (84%)
Frame = +3 / +3
Query: 213 ENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGY 392
ENGMD PGNLTR + L+D TR+ +Y++Y+ QLKKA D GAN+ GYFAWSLLDNFEW GY
Sbjct: 171 ENGMDDPGNLTRSKALQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGY 350
Query: 393 SSKFGIVYVDFNTLER 440
+S+FGIVYVD++ L+R
Sbjct: 351 TSRFGIVYVDYSNLKR 398
Score = 65.7 bits (137), Expect(2) = 6e-046
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3 / +1
Query: 90 RNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITE 215
+ G IGP+ANS WLY P GMY V Y+KE+YGNPT+ ++E
Sbjct: 46 KKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSE 171
>gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 643
Score = 179 bits (385), Expect = 2e-044
Identities = 64/109 (58%), Positives = 82/109 (75%)
Frame = +3 / +2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y DW + + + G IGP+ANS WLY P GMY V Y+KE+YGNPT+ ++ENGMD P
Sbjct: 317 YQQDWNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDP 496
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEW 380
GNLTR + ++D TR+ +Y++Y+ QLKKA D GAN+ GYFAWSLLDNFEW
Sbjct: 497 GNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANMVGYFAWSLLDNFEW 643
>gb|CK102593.1|CK102593 G084P08.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G084P08 5', mRNA sequence
Length = 416
Score = 146 bits (313), Expect(2) = 2e-041
Identities = 53/97 (54%), Positives = 70/97 (72%)
Frame = +3 / +2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y DW + + + G IGP+ANS WLY P GMY V Y+KE+YGNPT+ ++ENGMD P
Sbjct: 11 YQQDWNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDP 190
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAG 344
GNLTR + L+D TR+ +Y++Y+ QLKKA D GAN+ G
Sbjct: 191 GNLTRSKALQDTTRIGYYKAYLSQLKKAADDGANLVG 301
Score = 43.2 bits (88), Expect(2) = 2e-041
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3 / +1
Query: 342 GYFAWSLLDNFEWLAGYSSKF 404
G F WSLLDNFEW GY+S+F
Sbjct: 301 GTFDWSLLDNFEWRLGYTSRF 363
>gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_A18 3', mRNA sequence
Length = 916
Score = 88.1 bits (186), Expect(3) = 2e-039
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3 / -2
Query: 252 QYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ L D RVR+++ Y+ + +AI G V GYFAWSLLDNFEW GY+ +FG+VYVD+
Sbjct: 579 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 406
Score = 78.5 bits (165), Expect(3) = 2e-039
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3 / -2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
Y A + V G+PIG +A S+WLY+ P G+ +NYL +KY NPTIY+TENGMD
Sbjct: 780 YKAQLMERRVEFEGGEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 607
Score = 34.1 bits (68), Expect(3) = 2e-039
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / -2
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPK+SAYWF L+
Sbjct: 402 NGLSRHPKSSAYWFMRFLK 346
>gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_K04 3', mRNA sequence
Length = 910
Score = 88.1 bits (186), Expect(3) = 2e-039
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3 / -3
Query: 252 QYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ L D RVR+++ Y+ + +AI G V GYFAWSLLDNFEW GY+ +FG+VYVD+
Sbjct: 410 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 237
Score = 78.5 bits (165), Expect(3) = 2e-039
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3 / -3
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
Y A + V G+PIG +A S+WLY+ P G+ +NYL +KY NPTIY+TENGMD
Sbjct: 611 YKAQLMERRVEFEGGEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 438
Score = 34.1 bits (68), Expect(3) = 2e-039
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / -3
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPK+SAYWF L+
Sbjct: 233 NGLSRHPKSSAYWFMRFLK 177
>gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_D09 3', mRNA sequence
Length = 885
Score = 88.1 bits (186), Expect(3) = 2e-039
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3 / -3
Query: 252 QYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ L D RVR+++ Y+ + +AI G V GYFAWSLLDNFEW GY+ +FG+VYVD+
Sbjct: 556 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 383
Score = 78.5 bits (165), Expect(3) = 2e-039
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3 / -3
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
Y A + V G+PIG +A S+WLY+ P G+ +NYL +KY NPTIY+TENGMD
Sbjct: 757 YKAQLMERRVEFEGGEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 584
Score = 34.1 bits (68), Expect(3) = 2e-039
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / -3
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPK+SAYWF L+
Sbjct: 379 NGLSRHPKSSAYWFMRFLK 323
>gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F008P84 3', mRNA sequence
Length = 793
Score = 88.1 bits (186), Expect(3) = 2e-039
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3 / -2
Query: 252 QYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ L D RVR+++ Y+ + +AI G V GYFAWSLLDNFEW GY+ +FG+VYVD+
Sbjct: 504 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 331
Score = 78.5 bits (165), Expect(3) = 2e-039
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3 / -2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
Y A + V G+PIG +A S+WLY+ P G+ +NYL +KY NPTIY+TENGMD
Sbjct: 705 YKAQLMERRVEFEGGEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 532
Score = 34.1 bits (68), Expect(3) = 2e-039
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / -2
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPK+SAYWF L+
Sbjct: 327 NGLSRHPKSSAYWFMRFLK 271
>gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_O23 3', mRNA sequence
Length = 914
Score = 88.1 bits (186), Expect(3) = 2e-038
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3 / -1
Query: 252 QYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ L D RVR+++ Y+ + +AI G V GYFAWSLLDNFEW GY+ +FG+VYVD+
Sbjct: 524 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 351
Score = 76.2 bits (160), Expect(3) = 2e-038
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +3 / -1
Query: 96 GKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
G+PIG +A S+WLY+ P G+ +NYL +KY NPTIY+TENGMD
Sbjct: 683 GEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 552
Score = 33.6 bits (67), Expect(3) = 2e-038
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / -1
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPK+SAYWF L+
Sbjct: 347 NGLARHPKSSAYWFMRFLK 291
>gb|CV130609.1|CV130609 B9SP06h03 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 742
Score = 88.1 bits (186), Expect(3) = 3e-038
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3 / +2
Query: 252 QYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ L D RVR+++ Y+ + +AI G V GYFAWSLLDNFEW GY+ +FG+VYVD+
Sbjct: 272 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 445
Score = 75.3 bits (158), Expect(3) = 3e-038
Identities = 27/44 (61%), Positives = 34/44 (77%)
Frame = +3 / +2
Query: 96 GKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
G+PIG +A S+WLY+ P G+ +NYL KY NPTIY+TENGMD
Sbjct: 113 GEPIGEKAASEWLYVCPWGLRKVLNYLARKYNNPTIYVTENGMD 244
Score = 33.6 bits (67), Expect(3) = 3e-038
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPK+SAYWF L+
Sbjct: 449 NGLARHPKSSAYWFMRFLK 505
>gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02015A05 5', mRNA sequence
Length = 614
Score = 140 bits (301), Expect = 9e-033
Identities = 54/129 (41%), Positives = 83/129 (64%)
Frame = +3 / -2
Query: 39 LAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITEN 218
+A SY+ D +V +NG PIG + WLY+ P G+ + Y+K+ Y NP ++ITEN
Sbjct: 589 VANLSYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNYKNPPVFITEN 410
Query: 219 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSS 398
G+ + + L+D+ R+R++ +++ L KAI +GANV Y+ WS LD+FEW AGY+
Sbjct: 409 GIAENASRPLAFALKDSWRIRYHSAHLSYLLKAIQKGANVKAYYIWSFLDDFEWDAGYTV 230
Query: 399 KFGIVYVDF 425
+FG+ YVDF
Sbjct: 229 RFGVTYVDF 203
>gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_F08 3', mRNA sequence
Length = 879
Score = 90.4 bits (191), Expect(2) = 5e-032
Identities = 32/68 (47%), Positives = 48/68 (70%)
Frame = +3 / -1
Query: 222 MDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSK 401
++ G LT Q L D R+ +YRS++ L+ A+ +G V GYFAWS LD+FEW +GY+ +
Sbjct: 516 VNNEGKLTLKQQLNDTMRIDYYRSHLSFLRLAMAEGVKVKGYFAWSFLDDFEWNSGYTVR 337
Query: 402 FGIVYVDF 425
FGI+Y+D+
Sbjct: 336 FGIIYIDY 313
Score = 67.5 bits (141), Expect(2) = 5e-032
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +3 / -1
Query: 90 RNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGN 239
RNG IGPQA S WL++ P G+ + Y K+KY +P IYITENG+ + N
Sbjct: 657 RNGVLIGPQAGSTWLHVYPKGIRKLLLYTKKKYNDPVIYITENGVSEVNN 508
>gb|BP932598.1|BP932598 BP932598 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-038_A02.r 3', mRNA sequence
Length = 644
Score = 82.2 bits (173), Expect(3) = 1e-029
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +3 / -2
Query: 258 LRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
L+D R+R+ S++ L KAI +GANV GY+ W+ D+FEW AGY+ +FG++Y+DF
Sbjct: 478 LKDGLRIRYLASHLQYLSKAIKEGANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDF 311
Score = 58.3 bits (121), Expect(3) = 1e-029
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3 / -2
Query: 102 PIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGN 239
PIG WL+I P G+Y + Y+++KY NP +YITENG+ N
Sbjct: 640 PIGTPTALNWLFIYPKGIYDLMLYVRDKYKNPPLYITENGLADANN 503
Score = 27.6 bits (54), Expect(3) = 1e-029
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3 / -2
Query: 426 NTLERHPKASAYWFRDML 479
N L+R+ K SAYWF+ L
Sbjct: 307 NNLKRYMKYSAYWFKMFL 254
>gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 668
Score = 89.5 bits (189), Expect(4) = 5e-029
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +3 / +3
Query: 252 QYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+ L D RVR+++ Y+ L +AI G V GYFAWSLLDNFEW GY+ +FG+VYVD+
Sbjct: 138 EVLDDNLRVRYFKGYLASLAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 311
Score = 33.6 bits (67), Expect(4) = 5e-029
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPK+SAYWF L+
Sbjct: 315 NGLSRHPKSSAYWFLRFLK 371
Score = 32.7 bits (65), Expect(4) = 5e-029
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 192 NPTIYITENGMD 227
NPTIY+TENGMD
Sbjct: 75 NPTIYVTENGMD 110
Score = 27.2 bits (53), Expect(4) = 5e-029
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 132 LYIAPTGMYGCVNYLKEKY 188
LY+ P G+ +NYL +KY
Sbjct: 14 LYVCPWGLRKVLNYLAQKY 70
>gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_E15 5', mRNA sequence
Length = 727
Score = 110 bits (235), Expect(2) = 1e-028
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +3 / -2
Query: 237 NLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVY 416
N+T L+D RV + SY+ L+ A+ +GA+V GYFAWSLLDNFEW +GY+ +FG+ +
Sbjct: 561 NVTTKAVLKDVQRVEYMSSYLDALETAVRKGADVRGYFAWSLLDNFEWTSGYTIRFGLYH 382
Query: 417 VDFNTLERHPKASAYWFRDMLQKH 488
VDF+TL+R K SA W++D + +
Sbjct: 381 VDFSTLKRTRKLSATWYKDYIANY 310
Score = 35.9 bits (72), Expect(2) = 1e-028
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3 / -2
Query: 105 IGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNL 242
IG L GM V Y K++Y N +YITENG + N+
Sbjct: 699 IGQXTAXDXLXXXXQGMEKLVTYXKDRYNNIPMYITENGYCEEENV 562
>gb|CX174556.1|CX174556 D10_69-87_08.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 337
Score = 126 bits (269), Expect = 2e-028
Identities = 44/72 (61%), Positives = 61/72 (84%)
Frame = +3 / +3
Query: 273 RVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKA 452
R+ +Y++Y+ QLKKA D GAN+ GYFAWSLLDNFEW GY+S+FGIVYVD++ L+R+PK
Sbjct: 12 RIGYYKAYLSQLKKAADDGANMVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLKRYPKM 191
Query: 453 SAYWFRDMLQKH 488
SA WF+ +L+++
Sbjct: 192 SANWFKHLLERN 227
>gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C092P56 3', mRNA sequence
Length = 543
Score = 82.2 bits (173), Expect(3) = 3e-027
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +3 / -1
Query: 258 LRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
L+D R+R+ S++ L KAI +GANV GY+ W+ D+FEW AGY+ +FG++Y+DF
Sbjct: 393 LKDGLRIRYLASHLQYLSKAIKEGANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDF 226
Score = 50.1 bits (103), Expect(3) = 3e-027
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / -1
Query: 129 WLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGN 239
WL+I G+Y + Y+++KY NP IYITENG+ N
Sbjct: 528 WLFIYRKGIYDLMLYVRDKYKNPPIYITENGLADANN 418
Score = 27.6 bits (54), Expect(3) = 3e-027
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3 / -1
Query: 426 NTLERHPKASAYWFRDML 479
N L+R+ K SAYWF+ L
Sbjct: 222 NNLKRYMKYSAYWFKMFL 169
>gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_O18 5', mRNA sequence
Length = 789
Score = 80.3 bits (169), Expect(3) = 4e-027
Identities = 32/62 (51%), Positives = 40/62 (64%)
Frame = +3 / -1
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y+ D V +NGK IGPQA S WLY+ P G+ +NY K++Y NPTIYITENG+
Sbjct: 735 YATDXHVNXTGEKNGKLIGPQAASPWLYVYPKGIRYLLNYTKDRYRNPTIYITENGVSDF 556
Query: 234 GN 239
N
Sbjct: 555 NN 550
Score = 52.8 bits (109), Expect(3) = 4e-027
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3 / -1
Query: 306 LKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
L+ + G V GYFAW+ D+FEW GY+ +FG+ Y D+
Sbjct: 471 LRSIENYGTIVKGYFAWTFADDFEWPDGYTIRFGLYYTDY 352
Score = 26.3 bits (51), Expect(3) = 4e-027
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3 / -1
Query: 426 NTLERHPKASAYWFRDMLQ 482
+ L R+PK S +WF + L+
Sbjct: 348 HNLHRYPKRSVHWFTNFLK 292
>gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041F03 3', mRNA sequence
Length = 842
Score = 89.0 bits (188), Expect(2) = 6e-027
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +3 / -1
Query: 249 DQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFN 428
+++L D RV + Y+ L A+ +GA+V GYFAWS LDNFEW GY+ +FG+ +VD+
Sbjct: 347 EEFLHDTGRVEYMSGYLDALLTAMKKGADVRGYFAWSFLDNFEWTFGYTRRFGLYHVDYT 168
Query: 429 TLERHPK 449
T++R P+
Sbjct: 167 TMKRTPR 147
Score = 51.9 bits (107), Expect(2) = 6e-027
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3 / -1
Query: 90 RNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGN 239
++G PIG + W+++ GM V Y+KE+Y N + ITENG Q N
Sbjct: 512 KDGVPIGKPSEVDWIHVYSRGMEKMVTYVKERYNNIPMIITENGYSQVSN 363
>gb|BU883902.1|BU883902 R003A05 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 484
Score = 120 bits (256), Expect = 1e-026
Identities = 44/74 (59%), Positives = 53/74 (71%)
Frame = +3 / +2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y DW V + + +NG PIGP+ NS WLY P GMY V Y+KE+YGNPTI ++ENGMD P
Sbjct: 263 YQQDWNVGFAYKKNGVPIGPRENSNWLYNVPWGMYKAVMYIKERYGNPTIILSENGMDDP 442
Query: 234 GNLTRDQYLRDATR 275
GNLTR + L D TR
Sbjct: 443 GNLTRSKALHDTTR 484
>gb|CK092448.1|CK092448 G084P08.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G084P08 3', mRNA sequence
Length = 207
Score = 114 bits (243), Expect = 9e-025
Identities = 42/68 (61%), Positives = 57/68 (83%)
Frame = +3 / -3
Query: 246 RDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
R + L+ TR+ ++++Y+ QLKKA D GAN+ GYFAWSLLDNFEW GY+S+FGIVYVD+
Sbjct: 205 RSKALQAPTRIGYHKAYLFQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDY 26
Query: 426 NTLERHPK 449
+TL+R+PK
Sbjct: 25 STLKRYPK 2
>gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S066G12 3', mRNA sequence
Length = 824
Score = 62.5 bits (130), Expect(3) = 9e-025
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3 / -3
Query: 114 QANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
QA S+WL+I P G++ + Y+K+KYGNP + ITENGMD
Sbjct: 513 QAASRWLHIVPWGIHKLLKYVKDKYGNPPVVITENGMD 400
Score = 57.9 bits (120), Expect(3) = 9e-025
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +3 / -3
Query: 333 NVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
+V GYFAWSLLDN+EW +GY+ +FG+ +VD+
Sbjct: 285 DVRGYFAWSLLDNWEWNSGYTVRFGLYFVDY 193
Score = 30.9 bits (61), Expect(3) = 9e-025
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / -3
Query: 426 NTLERHPKASAYWFRDMLQKH*DLQSR 506
N L R PKASA WF+ L+ +L+S+
Sbjct: 189 NNLTRVPKASAEWFKSTLRLEDNLKSQ 109
>gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 634
Score = 79.9 bits (168), Expect(2) = 2e-024
Identities = 32/62 (51%), Positives = 40/62 (64%)
Frame = +3 / +2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
Y+ D V +NGK IGPQA S WLY+ P G+ +NY K++Y NPTIYITENG+
Sbjct: 233 YATDSHVNLTGEKNGKLIGPQAASPWLYVYPKGIRYLLNYTKDRYRNPTIYITENGVSDF 412
Query: 234 GN 239
N
Sbjct: 413 NN 418
Score = 52.8 bits (109), Expect(2) = 2e-024
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3 / +2
Query: 306 LKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
L+ + G V GYFAW+ D+FEW GY+ +FG+ Y D+
Sbjct: 497 LRSIENYGTIVKGYFAWTFADDFEWPDGYTIRFGLYYTDY 616
>gb|BU835778.1|BU835778 T078E10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 522
Score = 84.9 bits (179), Expect(3) = 2e-024
Identities = 29/56 (51%), Positives = 44/56 (78%)
Frame = +3 / +3
Query: 258 LRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
L+D R+R+ S++ L KAI++GANV GY+ W+L D+FEW AGY+ +FG++Y+DF
Sbjct: 96 LKDGLRIRYLASHLQYLSKAINEGANVKGYYQWALWDDFEWDAGYTVRFGMIYIDF 263
Score = 37.7 bits (76), Expect(3) = 2e-024
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3 / +3
Query: 171 YLKEKYGNPTIYITENGMDQPGN 239
Y+++KY NP IYITENG+ N
Sbjct: 3 YVRDKYKNPPIYITENGLADANN 71
Score = 27.6 bits (54), Expect(3) = 2e-024
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3 / +3
Query: 426 NTLERHPKASAYWFRDML 479
N L+R+ K SAYWF+ L
Sbjct: 267 NNLKRYMKYSAYWFKMFL 320
>gb|CV235854.1|CV235854 WS01221.B21_N19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01221_N19 3', mRNA sequence
Length = 536
Score = 111 bits (237), Expect = 6e-024
Identities = 41/74 (55%), Positives = 55/74 (74%)
Frame = +3 / -1
Query: 258 LRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLE 437
L+D RV F++SY+ L +AI GA+V GYF WSL+DNFEW+ GYS ++G+ YVD TLE
Sbjct: 485 LQDTNRVNFHKSYLAALARAIRNGADVRGYFVWSLVDNFEWIDGYSQRYGLYYVDRQTLE 306
Query: 438 RHPKASAYWFRDML 479
R PK SA W+++ L
Sbjct: 305 RVPKLSAKWYKNFL 264
>gb|CX657346.1|CX657346 PO02042F10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02042F10 5', mRNA sequence
Length = 646
Score = 111 bits (237), Expect = 6e-024
Identities = 43/114 (37%), Positives = 69/114 (60%)
Frame = +3 / +1
Query: 39 LAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITEN 218
+A SY+ D +V +NG PIG + W+Y+ P G+ + Y+K+ Y NP ++ITEN
Sbjct: 298 VANLSYTDDRRVSQTTEKNGVPIGTPTDLNWVYVYPRGIQDVLLYIKDNYKNPPVFITEN 477
Query: 219 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEW 380
G+ + + T L+D+ R+R+ +++ L KAI +G NV Y+ WS LD+ EW
Sbjct: 478 GIAENASRTLAFALKDSWRIRYXSAHLSYLLKAIQKGGNVKAYYIWSFLDDSEW 639
>gb|CV273187.1|CV273187 WS0171.B21_P05 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_P05 3', mRNA sequence
Length = 600
Score = 90.4 bits (191), Expect(2) = 5e-023
Identities = 32/68 (47%), Positives = 48/68 (70%)
Frame = +3 / -2
Query: 222 MDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSK 401
++ G LT Q L D R+ +YRS++ L+ A+ +G V GYFAWS LD+FEW +GY+ +
Sbjct: 494 VNNEGKLTLKQQLNDTMRIDYYRSHLSFLRLAMAEGVKVKGYFAWSFLDDFEWNSGYTVR 315
Query: 402 FGIVYVDF 425
FGI+Y+D+
Sbjct: 314 FGIIYIDY 291
Score = 37.3 bits (75), Expect(2) = 5e-023
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 171 YLKEKYGNPTIYITENGMDQPGN 239
Y K KY +P IYITENG+ + N
Sbjct: 554 YTKRKYNDPVIYITENGVSEVNN 486
>gb|CA927840.1|CA927840 MTU6TR.P13.E11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 407
Score = 105 bits (224), Expect = 4e-022
Identities = 38/84 (45%), Positives = 59/84 (70%)
Frame = +3 / -1
Query: 174 LKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFA 353
+K+ Y NP ++ITENG+ + + L+D+ R+R++ +++ L KAI +GANV Y+
Sbjct: 407 IKDNYKNPPVFITENGIAENASRPLAYALKDSWRIRYHSAHLSYLLKAIQKGANVKAYYI 228
Query: 354 WSLLDNFEWLAGYSSKFGIVYVDF 425
WS LD+FEW AGY+ +FG+ YVDF
Sbjct: 227 WSFLDDFEWDAGYTVRFGVTYVDF 156
>gb|BU810699.1|BU810699 UL74PC01 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 299
Score = 103 bits (220), Expect = 1e-021
Identities = 36/60 (60%), Positives = 50/60 (83%)
Frame = +3 / +3
Query: 309 KKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH 488
++ D GAN+ GYFAWSLLDNFEW GY+S+FGIVYVD++ L+R+PK SA WF+ +L+++
Sbjct: 36 EETADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLKRYPKMSANWFKHLLERN 215
>gb|DN485248.1|DN485248 M122A11.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M122A11 3', mRNA sequence
Length = 821
Score = 63.8 bits (133), Expect(2) = 2e-021
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +3 / -1
Query: 306 LKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
L+ D G +V G+FAWS LD+FEW +GY S+FG+ Y+D+
Sbjct: 608 LRSINDHGVDVKGFFAWSFLDDFEWGSGYGSRFGLFYIDY 489
Score = 58.8 bits (122), Expect(2) = 2e-021
Identities = 22/60 (36%), Positives = 38/60 (63%)
Frame = +3 / -1
Query: 144 PTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAID 323
P G+ +NY+K+ Y NP IYITENG+D + + ++ L DA R ++Y+ + ++I+
Sbjct: 773 PEGIRHLLNYIKDAYENPPIYITENGVDDVNSSSLEEALNDAIREQYYKDIFHNVLRSIN 594
>gb|CX657290.1|CX657290 PO02039B10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02039B10 5', mRNA sequence
Length = 628
Score = 101 bits (216), Expect = 5e-021
Identities = 40/107 (37%), Positives = 65/107 (60%)
Frame = +3 / +1
Query: 39 LAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITEN 218
+A SY+ D +V +NG PIG + WLY+ P G+ + Y+K+ Y NP ++ITEN
Sbjct: 298 VANLSYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNYKNPPVFITEN 477
Query: 219 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWS 359
G+ + + L+D+ R+R++ +++ L KAI +GANV Y+ WS
Sbjct: 478 GIAENASRPLAFALKDSWRIRYHSAHLSYLLKAIQKGANVKAYYIWS 618
>gb|BP933409.1|BP933409 BP933409 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-051_A15.r 3', mRNA sequence
Length = 564
Score = 82.2 bits (173), Expect(3) = 5e-021
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +3 / -2
Query: 258 LRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDF 425
L+D R+R+ S++ L KAI +GANV GY+ W+ D+FEW AGY+ +FG++Y+DF
Sbjct: 476 LKDGLRIRYLASHLQYLSKAIKEGANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDF 309
Score = 28.6 bits (56), Expect(3) = 5e-021
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3 / -2
Query: 177 KEKYGNPTIYITENGMDQPGN 239
++KY NP + ITENG+ N
Sbjct: 563 RDKYKNPPLDITENGLADANN 501
Score = 27.6 bits (54), Expect(3) = 5e-021
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3 / -2
Query: 426 NTLERHPKASAYWFRDML 479
N L+R+ K SAYWF+ L
Sbjct: 305 NNLKRYMKYSAYWFKMFL 252
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 441,414,405
Number of Sequences: 369679
Number of extensions: 6717797
Number of successful extensions: 46827
Number of sequences better than 1.0e-020: 45
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 10493189280
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)