TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276642.2.1
(1062 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU832276.1|BU832276 T031F10 Populus apical shoot cDNA li... 251 7e-070
gb|CV274281.1|CV274281 WS0172.B21_M11 PTxD-NR-A-8 Populus t... 253 1e-069
gb|CA824413.1|CA824413 R41F09 two-month-old roots from clon... 253 1e-069
gb|DT482101.1|DT482101 WS02533.BR_O14 PT-MB-N-A-15 Populus ... 249 6e-069
gb|AJ777809.1|AJ777809 AJ777809 Populus euphratica root 3-6... 250 6e-069
gb|DT487515.1|DT487515 WS02533.B21_O14 PT-MB-N-A-15 Populus... 249 2e-068
gb|DT518576.1|DT518576 WS02438.B21_J08 PTxD-ICC-N-A-14 Popu... 238 3e-065
gb|CA930944.1|CA930944 MTU2TA.P12.F04 Aspen apex cDNA Libra... 216 1e-055
gb|CV268506.1|CV268506 WS0205.B21_K21 PTxN-IB-N-A-11 Populu... 186 3e-053
gb|DN484355.1|DN484355 G130P50.3pR Populus tension wood cDN... 192 2e-051
gb|CA931453.1|CA931453 MTU2TA.P7.E06 Aspen apex cDNA Librar... 188 1e-050
gb|AI164970.1|AI164970 A071P61U Hybrid aspen plasmid librar... 173 6e-045
gb|CK093711.1|CK093711 G130P42.3pR Populus tension wood cDN... 78 3e-042
gb|CK103730.1|CK103730 G130P01.5pR Populus tension wood cDN... 160 2e-041
gb|BI132032.1|BI132032 G130P01Y Populus cambium cDNA librar... 153 2e-041
gb|CV272489.1|CV272489 WS0157.B21_M22 PTxN-IB-A-6 Populus t... 157 5e-041
gb|CN522788.1|CN522788 GQ0122.B3_B18 GQ012 Populus trichoca... 166 3e-040
gb|DT512199.1|DT512199 WS02418.B21_K02 PTxD-ICC-N-A-14 Popu... 156 6e-039
gb|DT520978.1|DT520978 WS02033.B21_B04 PTxN-IB-N-A-11 Popul... 156 6e-039
gb|DT525144.1|DT525144 WS02044.C21_J01 PTxN-IB-N-A-11 Popul... 156 6e-039
gb|BU832092.1|BU832092 T029C12 Populus apical shoot cDNA li... 156 2e-038
gb|CF233492.1|CF233492 PtaJXO0024C2C0206 Poplar cDNA librar... 158 7e-038
gb|CV256643.1|CV256643 WS0244.B21_G18 PTxD-ICC-N-A-14 Popul... 157 9e-038
gb|CX655574.1|CX655574 PO02036F11 Poplar SC cDNA library Po... 157 9e-038
gb|DT508892.1|DT508892 WS02422.BR_D15 PTxD-ICC-N-A-14 Popul... 157 9e-038
gb|DT510085.1|DT510085 WS02425.BR_I20 PTxD-ICC-N-A-14 Popul... 157 9e-038
gb|DT514705.1|DT514705 WS02425.B21_I20 PTxD-ICC-N-A-14 Popu... 157 9e-038
gb|DT517583.1|DT517583 WS02434.B21_L14 PTxD-ICC-N-A-14 Popu... 157 9e-038
gb|CV238057.1|CV238057 WS0125.B21_C06 PT-GT-FL-A-3 Populus ... 155 3e-037
gb|DN489317.1|DN489317 T023D01.3pR Populus shoot meristem c... 155 3e-037
gb|DT516575.1|DT516575 WS02431.B21_M23 PTxD-ICC-N-A-14 Popu... 155 3e-037
gb|CV275896.1|CV275896 WS0177.B21_P21 PTxD-NR-A-8 Populus t... 149 4e-037
gb|CK092927.1|CK092927 G100P57.3pR Populus tension wood cDN... 154 9e-037
gb|BP934231.1|BP934231 BP934231 full-length enriched poplar... 152 3e-036
gb|DT513501.1|DT513501 WS02422.B21_D15 PTxD-ICC-N-A-14 Popu... 152 4e-036
gb|CN523502.1|CN523502 GQ015M07.T3_B08 GQ015 Populus tricho... 148 5e-035
gb|DT476539.1|DT476539 WS01229.B21_P03 PT-GT-FL-A-3 Populus... 148 5e-035
gb|DT485142.1|DT485142 WS02527.B21_G13 PT-MB-N-A-15 Populus... 148 5e-035
gb|DT511310.1|DT511310 WS02416.B21_B23 PTxD-ICC-N-A-14 Popu... 148 5e-035
gb|DT518220.1|DT518220 WS02436.B21_I16 PTxD-ICC-N-A-14 Popu... 148 5e-035
gb|DN490449.1|DN490449 UK131TE03.3pR Populus apical shoot c... 144 7e-035
gb|CX655663.1|CX655663 PO02038B07 Poplar SC cDNA library Po... 143 7e-035
gb|DN492283.1|DN492283 V062A01.3pR Populus male catkins cDN... 146 3e-034
gb|DN483723.1|DN483723 PSO202D09 Populus tomentiglandulosa ... 141 3e-034
gb|CF232662.1|CF232662 PtaJXO0014B9B0903 Poplar cDNA librar... 138 2e-033
gb|CB240309.1|CB240309 PopSC00287 Poplar SC cDNA library Po... 142 3e-033
gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, comple... 64 9e-030
gb|BU831146.1|BU831146 T017G12 Populus apical shoot cDNA li... 127 9e-029
gb|CF232732.1|CF232732 PtaJXO0015B7B0703 Poplar cDNA librar... 127 9e-029
gb|CN520782.1|CN520782 GQ0105.B3_I03 GQ010 Populus trichoca... 127 1e-028
gb|DN493752.1|DN493752 G130P50.5pR Populus tension wood cDN... 126 2e-028
gb|BI131350.1|BI131350 G119P62Y Populus cambium cDNA librar... 123 2e-027
gb|CV130787.1|CV130787 B9SP10h10 Populus stem seasonal libr... 122 3e-027
gb|BU879578.1|BU879578 V062A01 Populus flower cDNA library ... 116 2e-025
gb|BH860723.1|BH860723 ORNL222 Poplar BAC Library Populus t... 59 9e-025
gb|CV232907.1|CV232907 WS0199.B21_A19 PT-DX-N-A-10 Populus ... 94 5e-022
gb|BU812401.1|BU812401 UL95TH09 Populus leaf cDNA library P... 103 2e-021
gb|AI164321.1|AI164321 A059P32U Hybrid aspen plasmid librar... 101 6e-021
>gb|BU832276.1|BU832276 T031F10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 719
Score = 251 bits (543), Expect(2) = 7e-070
Identities = 90/138 (65%), Positives = 115/138 (83%)
Frame = -2 / +2
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD + K VY LDFP P+ G + TSVIN TY+ F+E++ QNND+ +Q+YH
Sbjct: 173 PATPIRLADQFKVKGVYKLDFPNRPLTGSSKMETSVINGTYRGFMEVILQNNDTKMQSYH 352
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+ GYA +VVGMDYGEWTENSRGTYNKWDG++R T QV+PGAWTA+++SLD+ G WN+RTE
Sbjct: 353 LSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQVYPGAWTAILVSLDNVGVWNLRTE 532
Query: 695 NLDTWYLGQETYIRVVDP 642
NLD+WYLGQETY+R+V+P
Sbjct: 533 NLDSWYLGQETYVRIVNP 586
Score = 146 bits (313), Expect = 3e-034
Identities = 78/138 (56%), Positives = 90/138 (65%)
Frame = +1 / -3
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G T L VS PRY SRFSV FQ P LSS++ AVHAPG T V+R PSHLL VP LF
Sbjct: 585 GLTILTYVSWPRYQESRFSVLRFQTPTLSSETKIAVHAPG*TWTVERAMPSHLLYVPLLF 406
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVHSP*SIPTT+ AYP *+ + SLF S LYV L+TDV I P G++GKSS
Sbjct: 405 SVHSP*SIPTTKTAYPLR**LCILVSLFCRMTSINPLYVPLITDVSILDDPVKGLLGKSS 226
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+ T F SA+L GV+G
Sbjct: 225 LYTPFTLNWSASLIGVAG 172
Score = 33.6 bits (67), Expect(2) = 7e-070
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQ 558
N TE+ PDN L+CG L QK Q
Sbjct: 596 NKTELPVPDNALFCGALSKFQKPQ 667
>gb|CV274281.1|CV274281 WS0172.B21_M11 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0172_M11 3', mRNA sequence
Length = 903
Score = 253 bits (546), Expect(2) = 1e-069
Identities = 90/138 (65%), Positives = 114/138 (82%)
Frame = -2 / -1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD + K Y LDFP P+ GPP + TSVIN TY+ F+E++ QNND+ + +YH
Sbjct: 855 PTTPIRLADQFKVKGAYKLDFPETPLTGPPKMATSVINGTYRGFMEVILQNNDTKMHSYH 676
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+ GYA +VVGMDYGEWTENSRGTYNKWDG++R T Q +PGAWTA+++SLD+ G WN+RTE
Sbjct: 675 LSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTE 496
Query: 695 NLDTWYLGQETYIRVVDP 642
NLD+WYLGQETYIR+V+P
Sbjct: 495 NLDSWYLGQETYIRIVNP 442
Score = 143 bits (307), Expect = 2e-033
Identities = 77/138 (55%), Positives = 88/138 (63%)
Frame = +1 / +2
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G T L+ VS PRY SRFSV FQ P LSS++ AV APG V+R PSHLL VP LF
Sbjct: 443 GLTILIYVSWPRYQESRFSVLRFQTPTLSSETKIAVQAPG*AWTVERAMPSHLLYVPLLF 622
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVHSP*SIPTT+ AYP *+ + SLF S LYV L+TDV I GGP G+ GKSS
Sbjct: 623 SVHSP*SIPTTKTAYPLR**LCILVSLFCRMTSINPLYVPLITDVAILGGPVRGVSGKSS 802
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+ F SA+L GV G
Sbjct: 803 LYAPFTLNWSASLIGVVG 856
Score = 105 bits (223), Expect = 7e-022
Identities = 49/137 (35%), Positives = 73/137 (53%)
Frame = +3 / +1
Query: 630 IASIWIHHPDVSLLTQIPRVQVFCPYIPKSWAVK*QHHSSPCSRKHLSRATRNTIPLVVS 809
++ +WI + D+ L +IP V+VFC +P S VK* + P SR L N IPL++
Sbjct: 430 VSLLWIDNSDIRFLAKIPGVKVFCSEVPDSNIVK*NQNCRPSSRISLDCGACNAIPLIIC 609
Query: 810 PTAILSPLTIVHSYNPECISINVVGLDS*VIVLKYNFQKVLVCGVNDRCSDHWRSINWHC 989
A+L P TI+H +N IS V+ + VIVL+ +F K VC ++ C S
Sbjct: 610 APAVLCPFTIIHPHNKNRIST*VIAMHLGVIVLQNDFHKSPVCSIDH*CCHFRWSCKGRL 789
Query: 990 REVKCVDILLVVQICQP 1040
RE+K + L +C+P
Sbjct: 790 REIKLIRTLHFELVCKP 840
Score = 31.3 bits (62), Expect(2) = 1e-069
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / -1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQ 558
N TE+ PDN L+CG L QK +
Sbjct: 432 NKTELPIPDNALFCGELSKLQKPE 361
>gb|CA824413.1|CA824413 R41F09 two-month-old roots from clone 'Beaupre' Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 601
Score = 253 bits (546), Expect(2) = 1e-069
Identities = 90/138 (65%), Positives = 114/138 (82%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD + K Y LDFP P+ GPP + TSVIN TY+ F+E++ QNND+ + +YH
Sbjct: 43 PTTPIRLADQFKVKGAYKLDFPETPLTGPPKMATSVINGTYRGFMEVILQNNDTKMHSYH 222
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+ GYA +VVGMDYGEWTENSRGTYNKWDG++R T Q +PGAWTA+++SLD+ G WN+RTE
Sbjct: 223 LSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTE 402
Query: 695 NLDTWYLGQETYIRVVDP 642
NLD+WYLGQETYIR+V+P
Sbjct: 403 NLDSWYLGQETYIRIVNP 456
Score = 143 bits (307), Expect = 2e-033
Identities = 77/138 (55%), Positives = 88/138 (63%)
Frame = +1 / -3
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G T L+ VS PRY SRFSV FQ P LSS++ AV APG V+R PSHLL VP LF
Sbjct: 455 GLTILIYVSWPRYQESRFSVLRFQTPTLSSETKIAVQAPG*AWTVERAMPSHLLYVPLLF 276
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVHSP*SIPTT+ AYP *+ + SLF S LYV L+TDV I GGP G+ GKSS
Sbjct: 275 SVHSP*SIPTTKTAYPLR**LCILVSLFCRMTSINPLYVPLITDVAILGGPVRGVSGKSS 96
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+ F SA+L GV G
Sbjct: 95 LYAPFTLNWSASLIGVVG 42
Score = 105 bits (223), Expect = 7e-022
Identities = 49/137 (35%), Positives = 73/137 (53%)
Frame = +3 / -2
Query: 630 IASIWIHHPDVSLLTQIPRVQVFCPYIPKSWAVK*QHHSSPCSRKHLSRATRNTIPLVVS 809
++ +WI + D+ L +IP V+VFC +P S VK* + P SR L N IPL++
Sbjct: 468 VSLLWIDNSDIRFLAKIPGVKVFCSEVPDSNIVK*NQNCRPSSRISLDCGACNAIPLIIC 289
Query: 810 PTAILSPLTIVHSYNPECISINVVGLDS*VIVLKYNFQKVLVCGVNDRCSDHWRSINWHC 989
A+L P TI+H +N IS V+ + VIVL+ +F K VC ++ C S
Sbjct: 288 APAVLCPFTIIHPHNKNRIST*VIAMHLGVIVLQNDFHKSPVCSIDH*CCHFRWSCKGRL 109
Query: 990 REVKCVDILLVVQICQP 1040
RE+K + L +C+P
Sbjct: 108 REIKLIRTLHFELVCKP 58
Score = 31.3 bits (62), Expect(2) = 1e-069
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQ 558
N TE+ PDN L+CG L QK +
Sbjct: 466 NKTELPIPDNALFCGELSKLQKPE 537
>gb|DT482101.1|DT482101 WS02533.BR_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_O14 5', mRNA sequence
Length = 802
Score = 249 bits (539), Expect(2) = 6e-069
Identities = 90/139 (64%), Positives = 116/139 (83%)
Frame = -2 / +1
Query: 1058 PPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTY 879
PP TPL+LA Y+ VY LDFP ++ PP + TS+IN T+K F+EI+FQNND+ VQ+Y
Sbjct: 115 PPSTPLKLAQQYNIPGVYKLDFPNAQMNRPPKVDTSLINGTFKGFMEIIFQNNDTAVQSY 294
Query: 878 HIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRT 699
H+DGYAF+VVGMD+G WTENSR TYNKWDGV+R TTQVFPGAWTA+++SLD+ G WN+R+
Sbjct: 295 HMDGYAFFVVGMDFGVWTENSRSTYNKWDGVARSTTQVFPGAWTAILVSLDNAGIWNLRS 474
Query: 698 ENLDTWYLGQETYIRVVDP 642
ENLD+WYLGQE Y+ +++P
Sbjct: 475 ENLDSWYLGQEVYLSIMNP 531
Score = 154 bits (330), Expect = 1e-036
Identities = 78/140 (55%), Positives = 91/140 (65%)
Frame = +1 / -3
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G L S PRYH SRFS R FQ P LS ++ AV APG T VV R TPSHLL V LF
Sbjct: 530 GFIMLKYTSWPRYHESRFSERRFQMPALSRETKIAVQAPGKTCVVLRATPSHLLYVLLLF 351
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVH+P SIPTT+NAYPS+W*+WT SLF* IS L V L+ +V GG I +GKSS
Sbjct: 350 SVHTPKSIPTTKNAYPSIW*LWTAVSLF*KIISMNPLKVPLIREVSTLGGLFICALGKSS 171
Query: 1003 V*TSFLSYRSANLRGVSGGE 1062
+*T + Y A+ GV GG+
Sbjct: 170 L*TPGMLYCWASFSGVEGGK 111
Score = 102 bits (217), Expect = 5e-021
Identities = 54/140 (38%), Positives = 79/140 (56%)
Frame = +3 / -2
Query: 639 IWIHHPDVSLLTQIPRVQVFCPYIPKSWAVK*QHHSSPCSRKHLSRATRNTIPLVVSPTA 818
+WIH+ + L QIP V++ IP + VK +S P SRK L A N +P VV +A
Sbjct: 534 LWIHNAQIYFLAQIP*VKIL*TEIPNASIVKRN*NSCPSSRKDLCSAASNAVPFVVRASA 355
Query: 819 ILSPLTIVHSYNPECISINVVGLDS*VIVLKYNFQKVLVCGVNDRCSDHWRSINWHCREV 998
IL P + +H++N +CISI++V LDS +IVLK N + ++ + RSI+ EV
Sbjct: 354 ILCPHSKIHTHNKKCISIHMVALDSGIIVLKDNLHEPFESAID*GSINFGRSIHLCVGEV 175
Query: 999 KCVDILLVVQICQP*RSVGW 1058
K VD V+ + + *R W
Sbjct: 174 KLVDPWDVILLGKL*RC*RW 115
Score = 32.2 bits (64), Expect(2) = 6e-069
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2 / +1
Query: 623 TEMVAPDNMLYCGLLKDKQKAQKPHGSRSSA 531
+E PDN +YCG+L QK Q S S A
Sbjct: 544 SEAPLPDNTIYCGILSSLQKDQARRFSFSGA 636
>gb|AJ777809.1|AJ777809 AJ777809 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035D05F1, mRNA sequence
Length = 736
Score = 250 bits (541), Expect(2) = 6e-069
Identities = 88/138 (63%), Positives = 113/138 (81%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD + K Y LDFP P+ GPP + TSVIN TY+ F+E++ QNND+ + +YH
Sbjct: 100 PTTPIRLADQFKVKGAYKLDFPETPLTGPPKMATSVINGTYRGFMEVILQNNDTKMHSYH 279
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
+ GYA +VVGMDYGEWTENSRGTYNKWDG++R T Q +PGAWT +++SLD+ G WN+RTE
Sbjct: 280 LSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWTTILVSLDNVGVWNLRTE 459
Query: 695 NLDTWYLGQETYIRVVDP 642
NLD+WYLGQETY+R+V+P
Sbjct: 460 NLDSWYLGQETYVRIVNP 513
Score = 140 bits (301), Expect = 1e-032
Identities = 76/138 (55%), Positives = 86/138 (62%)
Frame = +1 / -3
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G T L VS PRY SRFSV FQ P LSS++ V APG V+R PSHLL VP LF
Sbjct: 512 GLTILTYVSWPRYQESRFSVLRFQTPTLSSETKIVVQAPG*AWTVERAIPSHLLYVPLLF 333
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVHSP*SIPTT+ AYP *+ + SLF S LYV L+TDV I GGP G+ GKSS
Sbjct: 332 SVHSP*SIPTTKTAYPLR**LCILVSLFCRMTSINPLYVPLITDVAILGGPVRGVSGKSS 153
Query: 1003 V*TSFLSYRSANLRGVSG 1056
+ F SA+L GV G
Sbjct: 152 LYAPFTLNWSASLIGVVG 99
Score = 31.3 bits (62), Expect(2) = 6e-069
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQ 558
N TE+ PDN L+CG L QK +
Sbjct: 523 NKTELPIPDNALFCGELSKLQKPE 594
>gb|DT487515.1|DT487515 WS02533.B21_O14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_O14 3', mRNA sequence
Length = 877
Score = 249 bits (539), Expect(2) = 2e-068
Identities = 90/139 (64%), Positives = 116/139 (83%)
Frame = -2 / -3
Query: 1058 PPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTY 879
PP TPL+LA Y+ VY LDFP ++ PP + TS+IN T+K F+EI+FQNND+ VQ+Y
Sbjct: 770 PPSTPLKLAQQYNIPGVYKLDFPNAQMNRPPKVDTSLINGTFKGFMEIIFQNNDTAVQSY 591
Query: 878 HIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRT 699
H+DGYAF+VVGMD+G WTENSR TYNKWDGV+R TTQVFPGAWTA+++SLD+ G WN+R+
Sbjct: 590 HMDGYAFFVVGMDFGVWTENSRSTYNKWDGVARSTTQVFPGAWTAILVSLDNAGIWNLRS 411
Query: 698 ENLDTWYLGQETYIRVVDP 642
ENLD+WYLGQE Y+ +++P
Sbjct: 410 ENLDSWYLGQEVYLSIMNP 354
Score = 152 bits (327), Expect = 3e-036
Identities = 77/140 (55%), Positives = 91/140 (65%)
Frame = +1 / +1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G L S P+YH SRFS R FQ P LS ++ AV APG T VV R TPSHLL V LF
Sbjct: 355 GFIMLKYTSWPKYHESRFSERRFQMPALSRETKIAVQAPGKTCVVLRATPSHLLYVLLLF 534
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVH+P SIPTT+NAYPS+W*+WT SLF* IS L V L+ +V GG I +GKSS
Sbjct: 535 SVHTPKSIPTTKNAYPSIW*LWTAVSLF*KIISMNPLKVPLIREVSTLGGLFICALGKSS 714
Query: 1003 V*TSFLSYRSANLRGVSGGE 1062
+*T + Y A+ GV GG+
Sbjct: 715 L*TPGMLYCWASFSGVEGGK 774
Score = 102 bits (217), Expect = 5e-021
Identities = 54/140 (38%), Positives = 79/140 (56%)
Frame = +3 / +3
Query: 639 IWIHHPDVSLLTQIPRVQVFCPYIPKSWAVK*QHHSSPCSRKHLSRATRNTIPLVVSPTA 818
+WIH+ + L QIP V++ IP + VK +S P SRK L A N +P VV +A
Sbjct: 351 LWIHNAQIYFLAQIP*VKIL*TEIPNASIVKRN*NSCPSSRKDLCSAASNAVPFVVRASA 530
Query: 819 ILSPLTIVHSYNPECISINVVGLDS*VIVLKYNFQKVLVCGVNDRCSDHWRSINWHCREV 998
IL P + +H++N +CISI++V LDS +IVLK N + ++ + RSI+ EV
Sbjct: 531 ILCPHSKIHTHNKKCISIHMVALDSGIIVLKDNLHEPFESAID*GSINFGRSIHLCVGEV 710
Query: 999 KCVDILLVVQICQP*RSVGW 1058
K VD V+ + + *R W
Sbjct: 711 KLVDPWDVILLGKL*RC*RW 770
Score = 30.9 bits (61), Expect(2) = 2e-068
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 623 TEMVAPDNMLYCGLLKDKQKAQ 558
+E PDN +YCG+L QK Q
Sbjct: 341 SEAPLPDNTIYCGILSSLQKDQ 276
>gb|DT518576.1|DT518576 WS02438.B21_J08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_J08 3', mRNA sequence
Length = 860
Score = 238 bits (515), Expect(2) = 3e-065
Identities = 85/131 (64%), Positives = 109/131 (83%)
Frame = -2 / -1
Query: 1034 ADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFW 855
AD + K VY LDFP P+ G + TSVIN TY+ F+E++ QNND+ +Q+YH+ GYA +
Sbjct: 860 ADQFKVKGVYKLDFPNKPLTGSSKMETSVINGTYRGFMEVILQNNDTKMQSYHLSGYAVF 681
Query: 854 VVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYL 675
VVGMDYGEWTENSRGTYNKWDG++R T QV+PGAWTA+++SLD+ G WN+RTENLD+WYL
Sbjct: 680 VVGMDYGEWTENSRGTYNKWDGIARSTVQVYPGAWTAILVSLDNVGVWNLRTENLDSWYL 501
Query: 674 GQETYIRVVDP 642
GQETY+R+V+P
Sbjct: 500 GQETYVRIVNP 468
Score = 139 bits (298), Expect = 3e-032
Identities = 73/125 (58%), Positives = 82/125 (65%)
Frame = +1 / +1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G T L VS PRY SRFSV FQ P LSSD+ AVHAPG T V+R PSHLL VP LF
Sbjct: 469 GLTILTYVSWPRYQESRFSVLRFQTPTLSSDTKIAVHAPG*TWTVERAMPSHLLYVPLLF 648
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
SVHSP*SIPTT+ AYP *+ + SLF S LYV L+TDV I P G++GKSS
Sbjct: 649 SVHSP*SIPTTKTAYPLR**LCILVSLFCRMTSINPLYVPLITDVSILDDPVKGLLGKSS 828
Query: 1003 V*TSF 1017
+ T F
Sbjct: 829 LYTPF 843
Score = 30.9 bits (61), Expect(2) = 3e-065
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / -1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQ 558
N TE+ PDN L+CG L QK +
Sbjct: 458 NKTELPIPDNALFCGALGKFQKPE 387
>gb|CA930944.1|CA930944 MTU2TA.P12.F04 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 438
Score = 216 bits (467), Expect = 1e-055
Identities = 79/135 (58%), Positives = 108/135 (80%)
Frame = -2 / +2
Query: 1046 PLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDG 867
P+RLADL K Y LDFP P++ TSVIN+T+K F+EI+ QNND+ +Q++H++G
Sbjct: 2 PIRLADLNKVKGSYKLDFPGAPLNRTFHRDTSVINATFKGFIEIILQNNDTRMQSFHMNG 181
Query: 866 YAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLD 687
Y+F+VVGMD+G W+ENSRG+YNKWD +SR T +V+PG WTAV+ SLD+ G WN+R ENLD
Sbjct: 182 YSFFVVGMDWGIWSENSRGSYNKWDAISRSTVEVYPGGWTAVLASLDNAGVWNLRVENLD 361
Query: 686 TWYLGQETYIRVVDP 642
WYLGQ+TY+R+++P
Sbjct: 362 RWYLGQDTYMRIINP 406
Score = 108 bits (231), Expect = 5e-023
Identities = 65/135 (48%), Positives = 77/135 (57%)
Frame = +1 / -1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G L+ VS PRYH+SRFS F P LS ++ TAVH PG T V RE SHLL P LF
Sbjct: 405 GLMILIYVSWPRYHLSRFSTLRFHTPALSREARTAVHPPG*TSTVLREIASHLLYEPLLF 226
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGKSS 1002
S P SIPTT+ P M + + SLF N IS L V L+T+V + G GKSS
Sbjct: 225 SDQMPQSIPTTKKE*PFM*KLCILVSLFCNMISINPLNVALITEVSLWKVLLSGAPGKSS 46
Query: 1003 V*TSFLSYRSANLRG 1047
+* F RSA+L G
Sbjct: 45 L*DPFTLLRSASLIG 1
>gb|CV268506.1|CV268506 WS0205.B21_K21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_K21 3', mRNA sequence
Length = 739
Score = 186 bits (401), Expect(3) = 3e-053
Identities = 65/90 (72%), Positives = 82/90 (91%)
Frame = -2 / -1
Query: 911 FQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLS 732
FQNND+ VQ+YH+DGYAF+VVGMD+G WTENSR TYNKWDGV+R TTQVFPGAWTA+++S
Sbjct: 664 FQNNDTAVQSYHMDGYAFFVVGMDFGVWTENSRSTYNKWDGVARSTTQVFPGAWTAILVS 485
Query: 731 LDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
LD+ G WN+R+ENLD+WYLGQE Y+ +++P
Sbjct: 484 LDNAGIWNLRSENLDSWYLGQEVYLSIMNP 395
Score = 124 bits (265), Expect = 1e-027
Identities = 58/89 (65%), Positives = 64/89 (71%)
Frame = +1 / +3
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G L S PRYH SRFS R FQ P LS ++ AV APGNT VV R TPSHLL V LF
Sbjct: 396 GFIMLKYTSWPRYHESRFSERRFQMPALSRETKIAVQAPGNTCVVLRATPSHLLYVLLLF 575
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF* 909
SVH+P SIPTT+NAYPS+W*+WT SLF*
Sbjct: 576 SVHTPKSIPTTKNAYPSIW*LWTAVSLF* 662
Score = 30.9 bits (61), Expect(3) = 3e-053
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2 / -1
Query: 623 TEMVAPDNMLYCGLLKDKQKAQKPHGSRSSA 531
+E PDN +YCG+L QK Q S S A
Sbjct: 382 SEAPLPDNTIYCGILSYLQKDQARRFSFSGA 290
Score = 30.9 bits (61), Expect(3) = 3e-053
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2 / -2
Query: 968 PVIRTSVINSTYKNFLEIVFQ 906
P + TS+IN T+K F+EI F+
Sbjct: 720 PKVDTSLINGTFKGFMEISFR 658
>gb|DN484355.1|DN484355 G130P50.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G130P50 3', mRNA sequence
Length = 685
Score = 192 bits (414), Expect(2) = 2e-051
Identities = 65/95 (68%), Positives = 85/95 (89%)
Frame = -2 / -3
Query: 926 FLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWT 747
F+E++ QNND+ + +YH+ GYA +VVGMDYGEWTENSRGTYNKWDG++R T Q +PGAWT
Sbjct: 680 FMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWT 501
Query: 746 AVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
A+++SLD+ G WN+RTENLD+WYLGQETY+R+V+P
Sbjct: 500 AILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNP 396
Score = 103 bits (220), Expect = 2e-021
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = +1 / +1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G T L VS PRY SRFSV FQ P LSS++ AV APG V+R PSHLL VP LF
Sbjct: 397 GLTILTYVSWPRYQESRFSVLRFQTPTLSSETKIAVQAPG*AWTVERAMPSHLLYVPLLF 576
Query: 823 SVHSP*SIPTTQNAYPSMW*VWTVESLF 906
SVHSP*SIPTT+ AYP *+ + SLF
Sbjct: 577 SVHSP*SIPTTKTAYPLR**LCILVSLF 660
Score = 31.3 bits (62), Expect(2) = 2e-051
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQ 558
N TE+ PDN L+CG L QK +
Sbjct: 386 NKTELPIPDNALFCGELSKLQKPE 315
>gb|CA931453.1|CA931453 MTU2TA.P7.E06 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 580
Score = 188 bits (404), Expect(2) = 1e-050
Identities = 65/104 (62%), Positives = 89/104 (85%)
Frame = -2 / -1
Query: 953 SVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCT 774
SVIN+T K F+EI+ Q ND+ +Q++H++GY+F+VVGMD+G W+ENSRG+YNKWD +SR T
Sbjct: 580 SVINATSKGFIEIILQTNDTRMQSFHMNGYSFFVVGMDWGIWSENSRGSYNKWDAISRST 401
Query: 773 TQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
+V+PG WTAV+ SLD+ G WN+R ENLD WYLGQETY+R+++P
Sbjct: 400 VEVYPGGWTAVLASLDNAGVWNLRVENLDRWYLGQETYMRIINP 269
Score = 33.1 bits (66), Expect(2) = 1e-050
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2 / -1
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TEM P+N+LYCG L KQ+
Sbjct: 253 TEMPPPNNVLYCGALASKQQ 194
>gb|AI164970.1|AI164970 A071P61U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 384
Score = 173 bits (372), Expect(2) = 6e-045
Identities = 59/83 (71%), Positives = 75/83 (90%)
Frame = -2 / +2
Query: 890 VQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFW 711
+ +YH+ GYA +VVGMDYGEWTENSRGTYNKWDG++R T Q +PGAWTA+++SLD+ G W
Sbjct: 5 MHSYHLSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWTAILVSLDNVGVW 184
Query: 710 NVRTENLDTWYLGQETYIRVVDP 642
N+RTENLD+WYLGQETY+R+V+P
Sbjct: 185 NLRTENLDSWYLGQETYVRIVNP 253
Score = 101 bits (215), Expect = 9e-021
Identities = 49/76 (64%), Positives = 53/76 (69%)
Frame = +1 / -1
Query: 643 GSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPRLF 822
G T L VS PRY SRFSV FQ P LSS++ AV APG V+R PSHLL VP LF
Sbjct: 252 GLTILTYVSWPRYQESRFSVLRFQTPTLSSETKIAVQAPG*AWTVERAMPSHLLYVPLLF 73
Query: 823 SVHSP*SIPTTQNAYP 870
SVHSP*SIPTT+ AYP
Sbjct: 72 SVHSP*SIPTTKTAYP 25
Score = 28.6 bits (56), Expect(2) = 6e-045
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2 / +2
Query: 629 NVTEMVAPDNMLYCGLLKDKQ 567
N TE+ PDN L+CG L Q
Sbjct: 263 NKTELPIPDNALFCGELSKLQ 325
>gb|CK093711.1|CK093711 G130P42.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G130P42 3', mRNA sequence
Length = 805
Score = 78.0 bits (164), Expect(4) = 3e-042
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = -2 / -3
Query: 761 PGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
PG WTAV+ SLD+ G WN+R ENLD WYLGQETY+++ +P
Sbjct: 611 PGGWTAVLASLDNVGIWNLRVENLDRWYLGQETYMKITNP 492
Score = 72.5 bits (152), Expect(4) = 3e-042
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = -2 / -2
Query: 860 FWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFP 759
F+VVGMD+G W+ENSRG+YNKWD +SRCT +V+P
Sbjct: 711 FFVVGMDWGIWSENSRGSYNKWDSISRCTIEVYP 610
Score = 41.8 bits (85), Expect(4) = 3e-042
Identities = 12/24 (50%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 944 NSTYKNFLEIVFQNNDSTVQTYHI 873
N+TYK F+E++ QNND+ +Q++H+
Sbjct: 797 NATYKGFIEVILQNNDTKMQSFHM 726
Score = 36.3 bits (73), Expect(4) = 3e-042
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2 / -3
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TEM PDN+L+CG L KQK
Sbjct: 476 TEMAPPDNVLFCGALASKQK 417
>gb|CK103730.1|CK103730 G130P01.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G130P01 5', mRNA sequence
Length = 524
Score = 160 bits (343), Expect(2) = 2e-041
Identities = 53/83 (63%), Positives = 73/83 (87%)
Frame = -2 / +3
Query: 890 VQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFW 711
+Q++H++GY+F+VVGMD+G W+ENSRG+YNKWD +SRCT +V+PG WTAV+ SLD+ G W
Sbjct: 6 MQSFHMNGYSFFVVGMDWGIWSENSRGSYNKWDSISRCTIEVYPGGWTAVLASLDNVGIW 185
Query: 710 NVRTENLDTWYLGQETYIRVVDP 642
N+R ENLD WYLGQETY+++ +P
Sbjct: 186 NLRVENLDRWYLGQETYMKITNP 254
Score = 30.4 bits (60), Expect(2) = 2e-041
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2 / +2
Query: 641 NGGYNVTEMVAPDNMLYCGLLKDKQK 564
+GG PDN+L+CG L KQK
Sbjct: 251 SGGKRRNRDGPPDNVLFCGALASKQK 328
>gb|BI132032.1|BI132032 G130P01Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 416
Score = 153 bits (329), Expect(2) = 2e-041
Identities = 51/82 (62%), Positives = 70/82 (85%)
Frame = -2 / +1
Query: 887 QTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWN 708
+ + ++GY+F+VVGMD+G W+ENSRG+YNKWD +SRCT +V+PG WTAV+ SLD+ G WN
Sbjct: 10 RAFTVNGYSFFVVGMDWGIWSENSRGSYNKWDSISRCTIEVYPGGWTAVLASLDNVGIWN 189
Query: 707 VRTENLDTWYLGQETYIRVVDP 642
+R ENLD WYLGQETY+++ +P
Sbjct: 190 LRVENLDRWYLGQETYMKITNP 255
Score = 36.3 bits (73), Expect(2) = 2e-041
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2 / +1
Query: 623 TEMVAPDNMLYCGLLKDKQK 564
TEM PDN+L+CG L KQK
Sbjct: 271 TEMAPPDNVLFCGALASKQK 330
>gb|CV272489.1|CV272489 WS0157.B21_M22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0157_M22 3', mRNA sequence
Length = 652
Score = 157 bits (337), Expect(2) = 5e-041
Identities = 55/71 (77%), Positives = 66/71 (92%)
Frame = -2 / -1
Query: 854 VVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYL 675
VVGMDYGEWTENSRGTYNKWDG++R T Q +PGAWTA+++SLD+ G WN+RTENLD+WYL
Sbjct: 652 VVGMDYGEWTENSRGTYNKWDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDSWYL 473
Query: 674 GQETYIRVVDP 642
GQETYIR+V+P
Sbjct: 472 GQETYIRIVNP 440
Score = 31.3 bits (62), Expect(2) = 5e-041
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / -1
Query: 629 NVTEMVAPDNMLYCGLLKDKQKAQ 558
N TE+ PDN L+CG L QK +
Sbjct: 430 NKTELPIPDNALFCGELSKLQKPE 359
>gb|CN522788.1|CN522788 GQ0122.B3_B18 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0122_B18 5', mRNA sequence
Length = 612
Score = 166 bits (356), Expect = 3e-040
Identities = 61/97 (62%), Positives = 76/97 (78%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYH 876
P TP+RLAD + K VY LDFP P+ G + TSVIN TY+ F+E++ QNND+ +Q+YH
Sbjct: 229 PATPIRLADQFKVKGVYKLDFPNKPLTGSSKMETSVINGTYRGFMEVILQNNDTKMQSYH 408
Query: 875 IDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQV 765
+ GYA +VVGMDYGEWTENSRGTYNKWDG++R T QV
Sbjct: 409 LSGYAVFVVGMDYGEWTENSRGTYNKWDGIARSTVQV 519
>gb|DT512199.1|DT512199 WS02418.B21_K02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_K02 3', mRNA sequence
Length = 927
Score = 156 bits (336), Expect(2) = 6e-039
Identities = 62/111 (55%), Positives = 80/111 (72%)
Frame = -2 / -3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVFQNN+ VQ++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 793 PYGGGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQY 614
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N DGVSRCT QV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 613 NLRDGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 461
Score = 24.9 bits (48), Expect(2) = 6e-039
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTP++LAD + + V+
Sbjct: 868 PDTPMKLADYFKIQGVF 818
>gb|DT520978.1|DT520978 WS02033.B21_B04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02033_B04 3', mRNA sequence
Length = 868
Score = 156 bits (336), Expect(2) = 6e-039
Identities = 62/111 (55%), Positives = 80/111 (72%)
Frame = -2 / -2
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVFQNN+ VQ++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 636 PYGGGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQY 457
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N DGVSRCT QV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 456 NLRDGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 304
Score = 24.9 bits (48), Expect(2) = 6e-039
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTP++LAD + + V+
Sbjct: 711 PDTPMKLADYFKIQGVF 661
>gb|DT525144.1|DT525144 WS02044.C21_J01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02044_J01 3', mRNA sequence
Length = 868
Score = 156 bits (336), Expect(2) = 6e-039
Identities = 62/111 (55%), Positives = 80/111 (72%)
Frame = -2 / -2
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVFQNN+ VQ++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 636 PYGGGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQY 457
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N DGVSRCT QV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 456 NLRDGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 304
Score = 24.9 bits (48), Expect(2) = 6e-039
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTP++LAD + + V+
Sbjct: 711 PDTPMKLADYFKIQGVF 661
>gb|BU832092.1|BU832092 T029C12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 780
Score = 156 bits (336), Expect(2) = 2e-038
Identities = 62/111 (55%), Positives = 80/111 (72%)
Frame = -2 / +1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVFQNN+ VQ++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 106 PYGGGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQY 285
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N DGVSRCT QV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 286 NLRDGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 438
Score = 23.5 bits (45), Expect(2) = 2e-038
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 1055 PDTPLRLADLY 1023
PDTP++LAD +
Sbjct: 31 PDTPMKLADYF 63
>gb|CF233492.1|CF233492 PtaJXO0024C2C0206 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 757
Score = 158 bits (339), Expect = 7e-038
Identities = 61/117 (52%), Positives = 83/117 (70%)
Frame = -2 / +2
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P + TSV+ + ++ F+EIVFQN+++ VQ++HI+GY+FWVVGMD G WT SR
Sbjct: 170 PDYPTGKKMYLDTSVLGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASR 349
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
YN D VSRCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV P
Sbjct: 350 NQYNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 520
>gb|CV256643.1|CV256643 WS0244.B21_G18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_G18 3', mRNA sequence
Length = 860
Score = 157 bits (338), Expect = 9e-038
Identities = 61/117 (52%), Positives = 83/117 (70%)
Frame = -2 / -1
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P + TSV+ + ++ F+EIVFQN+++ VQ++HI+GY+FWVVGMD G WT SR
Sbjct: 623 PDYPTGKKMYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASR 444
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
YN D VSRCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV P
Sbjct: 443 NQYNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 273
>gb|CX655574.1|CX655574 PO02036F11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02036F11 5', mRNA sequence
Length = 520
Score = 157 bits (338), Expect = 9e-038
Identities = 61/117 (52%), Positives = 83/117 (70%)
Frame = -2 / +2
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P + TSV+ + ++ F+EIVFQN+++ VQ++HI+GY+FWVVGMD G WT SR
Sbjct: 35 PDHPTGKKMYLDTSVLGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASR 214
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
YN D VSRCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV P
Sbjct: 215 NQYNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 385
>gb|DT508892.1|DT508892 WS02422.BR_D15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_D15 5', mRNA sequence
Length = 506
Score = 157 bits (338), Expect = 9e-038
Identities = 61/117 (52%), Positives = 83/117 (70%)
Frame = -2 / +1
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P + TSV+ + ++ F+EIVFQN+++ VQ++HI+GY+FWVVGMD G WT SR
Sbjct: 148 PDYPTGKKMYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASR 327
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
YN D VSRCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV P
Sbjct: 328 NQYNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 498
>gb|DT510085.1|DT510085 WS02425.BR_I20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I20 5', mRNA sequence
Length = 837
Score = 157 bits (338), Expect = 9e-038
Identities = 61/117 (52%), Positives = 83/117 (70%)
Frame = -2 / +3
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P + TSV+ + ++ F+EIVFQN+++ VQ++HI+GY+FWVVGMD G WT SR
Sbjct: 243 PDYPTGKKMYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASR 422
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
YN D VSRCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV P
Sbjct: 423 NQYNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 593
>gb|DT514705.1|DT514705 WS02425.B21_I20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_I20 3', mRNA sequence
Length = 853
Score = 157 bits (338), Expect = 9e-038
Identities = 61/117 (52%), Positives = 83/117 (70%)
Frame = -2 / -3
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P + TSV+ + ++ F+EIVFQN+++ VQ++HI+GY+FWVVGMD G WT SR
Sbjct: 611 PDYPTGKKMYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASR 432
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
YN D VSRCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV P
Sbjct: 431 NQYNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 261
>gb|DT517583.1|DT517583 WS02434.B21_L14 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02434_L14 3', mRNA sequence
Length = 829
Score = 157 bits (338), Expect = 9e-038
Identities = 61/117 (52%), Positives = 83/117 (70%)
Frame = -2 / -2
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P + TSV+ + ++ F+EIVFQN+++ VQ++HI+GY+FWVVGMD G WT SR
Sbjct: 618 PDYPTGKKMYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASR 439
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
YN D VSRCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+RV P
Sbjct: 438 NQYNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMRVYSP 268
>gb|CV238057.1|CV238057 WS0125.B21_C06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0125_C06 3', mRNA sequence
Length = 697
Score = 155 bits (334), Expect = 3e-037
Identities = 57/107 (53%), Positives = 84/107 (78%)
Frame = -2 / -1
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
++T+V+++ ++ F+EIVFQN + TVQ++HIDG++F+VVGMD G+WT SR YN D V+
Sbjct: 640 LQTAVMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVA 461
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
RCTTQV+P +WTA+ ++LD+ G WN+R+EN YLGQ+ Y+RV P
Sbjct: 460 RCTTQVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSP 320
>gb|DN489317.1|DN489317 T023D01.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T023D01 3', mRNA sequence
Length = 745
Score = 155 bits (334), Expect = 3e-037
Identities = 57/107 (53%), Positives = 84/107 (78%)
Frame = -2 / -3
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
++T+V+++ ++ F+EIVFQN + TVQ++HIDG++F+VVGMD G+WT SR YN D V+
Sbjct: 521 LQTAVMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVA 342
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
RCTTQV+P +WTA+ ++LD+ G WN+R+EN YLGQ+ Y+RV P
Sbjct: 341 RCTTQVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSP 201
>gb|DT516575.1|DT516575 WS02431.B21_M23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02431_M23 3', mRNA sequence
Length = 712
Score = 155 bits (334), Expect = 3e-037
Identities = 57/107 (53%), Positives = 84/107 (78%)
Frame = -2 / -3
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVS 783
++T+V+++ ++ F+EIVFQN + TVQ++HIDG++F+VVGMD G+WT SR YN D V+
Sbjct: 641 LQTAVMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTTASRARYNLRDTVA 462
Query: 782 RCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
RCTTQV+P +WTA+ ++LD+ G WN+R+EN YLGQ+ Y+RV P
Sbjct: 461 RCTTQVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSP 321
>gb|CV275896.1|CV275896 WS0177.B21_P21 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_P21 3', mRNA sequence
Length = 878
Score = 149 bits (321), Expect(2) = 4e-037
Identities = 58/117 (49%), Positives = 82/117 (70%)
Frame = -2 / -1
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P G ++TSV+ + ++ + EIVF+N + VQ++HIDG+ F+VVGMD G+W+ SR
Sbjct: 746 PDSPTGGGAYLQTSVMAADFRGYAEIVFENPEDNVQSWHIDGHNFFVVGMDGGQWSPASR 567
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
+YN D +SRCT QV+P +WTAV + LD+ G WNVR+EN YLGQ+ Y+RV P
Sbjct: 566 LSYNLRDTISRCTVQVYPESWTAVYMPLDNVGMWNVRSENWARQYLGQQFYLRVYSP 396
Score = 25.8 bits (50), Expect(2) = 4e-037
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 1052 DTPLRLADLYDKKDVYTL 999
DTPL+LAD Y+ V++L
Sbjct: 809 DTPLKLADHYNIPGVFSL 756
>gb|CK092927.1|CK092927 G100P57.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G100P57 3', mRNA sequence
Length = 826
Score = 154 bits (331), Expect = 9e-037
Identities = 60/102 (58%), Positives = 77/102 (75%)
Frame = -2 / -1
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRC 777
TSV+ Y+ F+EIVFQNN+ VQ++H+DGY+F+VVGMD G+WT SR YN DGVSRC
Sbjct: 766 TSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRC 587
Query: 776 TTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
T QV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 586 TIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 461
>gb|BP934231.1|BP934231 BP934231 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-062_A03.r 3', mRNA sequence
Length = 706
Score = 152 bits (327), Expect = 3e-036
Identities = 59/102 (57%), Positives = 77/102 (75%)
Frame = -2 / -3
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRC 777
TSV+ Y+ F+EIVF+NN+ VQ++H+DGY+F+VVGMD G+WT SR YN DGVSRC
Sbjct: 704 TSVLTLPYRAFVEIVFRNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRC 525
Query: 776 TTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
T QV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 524 TIQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 399
>gb|DT513501.1|DT513501 WS02422.B21_D15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_D15 3', mRNA sequence
Length = 507
Score = 152 bits (326), Expect = 4e-036
Identities = 59/114 (51%), Positives = 81/114 (71%)
Frame = -2 / -1
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
P P + TSV+ + ++ F+EIVFQN+++ VQ++HI+GY+FWVVGMD G WT SR
Sbjct: 360 PDYPTGKKMYLDTSVMGADFRAFVEIVFQNHENIVQSWHINGYSFWVVGMDGGVWTPASR 181
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
YN D VSRCTTQV+P +WTA+ ++LD+ G WN+RTE YLGQ+ Y+ V
Sbjct: 180 NQYNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTEFWARQYLGQQFYMSV 19
>gb|CN523502.1|CN523502 GQ015M07.T3_B08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_B08 5', mRNA sequence
Length = 777
Score = 148 bits (318), Expect = 5e-035
Identities = 57/111 (51%), Positives = 80/111 (72%)
Frame = -2 / +3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + T+V+ Y+ ++EIVFQN++ +Q++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 213 PYGGGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQY 392
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D V+RCTTQV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 393 NLRDAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 545
>gb|DT476539.1|DT476539 WS01229.B21_P03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_P03 3', mRNA sequence
Length = 869
Score = 148 bits (318), Expect = 5e-035
Identities = 57/111 (51%), Positives = 80/111 (72%)
Frame = -2 / -1
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + T+V+ Y+ ++EIVFQN++ +Q++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 782 PYGGGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQY 603
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D V+RCTTQV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 602 NLRDAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 450
>gb|DT485142.1|DT485142 WS02527.B21_G13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_G13 3', mRNA sequence
Length = 904
Score = 148 bits (318), Expect = 5e-035
Identities = 57/111 (51%), Positives = 80/111 (72%)
Frame = -2 / -2
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + T+V+ Y+ ++EIVFQN++ +Q++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 777 PYGGGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQY 598
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D V+RCTTQV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 597 NLRDAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 445
>gb|DT511310.1|DT511310 WS02416.B21_B23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_B23 3', mRNA sequence
Length = 914
Score = 148 bits (318), Expect = 5e-035
Identities = 57/111 (51%), Positives = 80/111 (72%)
Frame = -2 / -2
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + T+V+ Y+ ++EIVFQN++ +Q++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 757 PYGGGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQY 578
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D V+RCTTQV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 577 NLRDAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 425
>gb|DT518220.1|DT518220 WS02436.B21_I16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02436_I16 3', mRNA sequence
Length = 915
Score = 148 bits (318), Expect = 5e-035
Identities = 57/111 (51%), Positives = 80/111 (72%)
Frame = -2 / -3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + T+V+ Y+ ++EIVFQN++ +Q++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 757 PYGGGLYLDTAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQY 578
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D V+RCTTQV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 577 NLRDAVARCTTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 425
>gb|DN490449.1|DN490449 UK131TE03.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone UK131TE03 3', mRNA
sequence
Length = 667
Score = 144 bits (308), Expect(2) = 7e-035
Identities = 53/111 (47%), Positives = 78/111 (70%)
Frame = -2 / -3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+++ +FLEIVFQN++ T+Q++H+DGY FWV+G G+WT R TY
Sbjct: 572 PSGGAAFLSTSVMSANLHDFLEIVFQNDEKTMQSWHLDGYDFWVIGYGNGQWTSAKRSTY 393
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D ++R T QV+P +WTA+ +SLD+ G WN+R+ + YLGQ+ Y+RV
Sbjct: 392 NLVDALTRHTVQVYPNSWTAIYVSLDNQGMWNLRSAIWERQYLGQQFYLRV 240
Score = 24.0 bits (46), Expect(2) = 7e-035
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 1052 DTPLRLADLYDKKDVYTLD 996
DTP++LAD + V+++D
Sbjct: 644 DTPVKLADYFGIPGVFSVD 588
>gb|CX655663.1|CX655663 PO02038B07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02038B07 5', mRNA sequence
Length = 576
Score = 143 bits (306), Expect(2) = 7e-035
Identities = 55/96 (57%), Positives = 71/96 (73%)
Frame = -2 / +2
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVFQNN+ VQ++H+DGY+F+VVGMD G+WT SR Y
Sbjct: 281 PYGGGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQY 460
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE 696
N DGVSRCT QV+P AWTA+ + LD+ G WN+RTE
Sbjct: 461 NLRDGVSRCTIQVYPKAWTAIYIPLDNVGMWNLRTE 568
Score = 24.9 bits (48), Expect(2) = 7e-035
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2 / +2
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTP++LAD + + V+
Sbjct: 206 PDTPMKLADYFKIQGVF 256
>gb|DN492283.1|DN492283 V062A01.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V062A01 3', mRNA sequence
Length = 750
Score = 146 bits (313), Expect = 3e-034
Identities = 55/102 (53%), Positives = 77/102 (75%)
Frame = -2 / -2
Query: 956 TSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRC 777
T+V+ Y+ ++EIVFQN++ +Q++H+DGY+F+VVGMD G+WT SR YN D V+RC
Sbjct: 746 TAVLTVPYRAYVEIVFQNDEDILQSWHLDGYSFFVVGMDGGQWTTASRDQYNLRDAVARC 567
Query: 776 TTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
TTQV+P AWTA+ + LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 566 TTQVYPKAWTAIYIPLDNVGMWNLRTEFWARQYLGQQFYLRV 441
>gb|DN483723.1|DN483723 PSO202D09 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 1202
Score = 141 bits (302), Expect(2) = 3e-034
Identities = 56/104 (53%), Positives = 71/104 (68%)
Frame = -2 / +2
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+ Y+ F+EIVFQNN+ VQ++H+DGY F+VVGMD G+WT SR Y
Sbjct: 521 PYGGGLYLDTSVLTLPYRAFVEIVFQNNEDIVQSWHLDGYCFFVVGMDGGQWTTASRNQY 700
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLG 672
N DGVSRCT QV+P WTA+ + LD+ G WN+ TE YLG
Sbjct: 701 NLRDGVSRCTIQVYPKXWTAIYIPLDNVGMWNLXTEFWARQYLG 832
Score = 24.9 bits (48), Expect(2) = 3e-034
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2 / +2
Query: 1055 PDTPLRLADLYDKKDVY 1005
PDTP++LAD + + V+
Sbjct: 446 PDTPMKLADYFKIQGVF 496
>gb|CF232662.1|CF232662 PtaJXO0014B9B0903 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 675
Score = 138 bits (295), Expect(2) = 2e-033
Identities = 51/111 (45%), Positives = 76/111 (68%)
Frame = -2 / +3
Query: 983 PIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTY 804
P G + TSV+++ +FLE+VFQN++ T+Q++H+DGY FWV+G G W R TY
Sbjct: 78 PSGGAAFLSTSVMSANLHDFLEVVFQNDEKTMQSWHLDGYDFWVIGYGNGLWNSAKRSTY 257
Query: 803 NKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
N D ++R T QV+P +WTA+ +SLD+ G WN+R+ + YLGQ+ Y+RV
Sbjct: 258 NLVDALTRHTVQVYPKSWTAIYVSLDNQGMWNMRSAIWERQYLGQQFYLRV 410
Score = 25.4 bits (49), Expect(2) = 2e-033
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2 / +3
Query: 1052 DTPLRLADLYDKKDVYTLD 996
DTPL+LAD + V+++D
Sbjct: 6 DTPLKLADYFGIPGVFSVD 62
>gb|CB240309.1|CB240309 PopSC00287 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00287, mRNA sequence
Length = 473
Score = 142 bits (305), Expect = 3e-033
Identities = 55/90 (61%), Positives = 69/90 (76%)
Frame = -2 / +2
Query: 920 EIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAV 741
EIVFQNN+ VQ++H+DGY+F+VVGMD G+WT SR YN DGVSRCT QV+P AWTA+
Sbjct: 2 EIVFQNNEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCTIQVYPKAWTAI 181
Query: 740 MLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
+ LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 182 YIPLDNVGMWNLRTEFWARQYLGQQFYLRV 271
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence
Length = 111678
Score = 64.3 bits (134), Expect(3) = 9e-030
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = -2 / -1
Query: 770 QVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDP 642
QV+P +WTA+ ++LD+ G WN+R+EN YLGQ+ Y+RV P
Sbjct: 49365 QVYPKSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSP 49237
Score = 59.3 bits (123), Expect(3) = 9e-030
Identities = 21/42 (50%), Positives = 36/42 (85%)
Frame = -2 / -2
Query: 962 IRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDY 837
++T+V+++ ++ F+EIVFQN + TVQ++HIDG++F+VVG Y
Sbjct: 49775 LQTAVMSANFREFIEIVFQNWEDTVQSWHIDGHSFFVVG*AY 49650
Score = 45.1 bits (92), Expect(3) = 9e-030
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2 / -3
Query: 857 WVVGMDYGEWTENSRGTYNKWDGVSRCTTQVF 762
+V MD G+WT SR YN D V+RCTTQV+
Sbjct: 49567 YVSSMDGGQWTPASRARYNLRDTVARCTTQVW 49472
>gb|BU831146.1|BU831146 T017G12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 695
Score = 127 bits (273), Expect = 9e-029
Identities = 48/87 (55%), Positives = 64/87 (73%)
Frame = -2 / +3
Query: 911 FQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLS 732
+ ++ VQ++H+DGY+F+VVGMD G+WT SR YN DGVSRCT QV+P AWTA+ +
Sbjct: 3 YSKHEDIVQSWHLDGYSFFVVGMDGGQWTTASRNQYNLRDGVSRCTIQVYPKAWTAIYIP 182
Query: 731 LDSPGFWNVRTENLDTWYLGQETYIRV 651
LD+ G WN+RTE YLGQ+ Y+RV
Sbjct: 183 LDNVGMWNLRTEFWARQYLGQQFYLRV 263
>gb|CF232732.1|CF232732 PtaJXO0015B7B0703 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 566
Score = 127 bits (273), Expect = 9e-029
Identities = 46/93 (49%), Positives = 67/93 (72%)
Frame = -2 / +3
Query: 929 NFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAW 750
+FLE+VFQN++ T+Q++H+DGY FWV+G G W R TYN D ++R T QV+P +W
Sbjct: 15 DFLEVVFQNDEKTMQSWHLDGYDFWVIGYGNGLWNSAKRSTYNLVDALTRHTVQVYPKSW 194
Query: 749 TAVMLSLDSPGFWNVRTENLDTWYLGQETYIRV 651
TA+ +SLD+ G WN+R+ + YLGQ+ Y+RV
Sbjct: 195 TAIYVSLDNQGMWNMRSAIWERQYLGQQFYLRV 293
>gb|CN520782.1|CN520782 GQ0105.B3_I03 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_I03 5', mRNA sequence
Length = 426
Score = 127 bits (272), Expect = 1e-028
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = -2 / +3
Query: 1058 PPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTY 879
PP TPL+LA Y+ VY LDFP ++ PP + TS+IN T+K F+EI+FQNND+ VQ+Y
Sbjct: 186 PPSTPLKLAQQYNIPGVYKLDFPNTQMNRPPKVDTSLINGTFKGFMEIIFQNNDTAVQSY 365
Query: 878 HIDGYAFWVVGMDYGEWTEN 819
H+DGYAF+VVGMD+G W N
Sbjct: 366 HMDGYAFFVVGMDFGVWXXN 425
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 595,428,944
Number of Sequences: 369679
Number of extensions: 9591965
Number of successful extensions: 56528
Number of sequences better than 1.0e-020: 66
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 14462970300
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)