TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2169937.2.1
(891 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN521164.1|CN521164 GQ0107.B3_F01 GQ010 Populus trichoca... 115 6e-035
gb|BU874016.1|BU874016 Q063D06 Populus flower cDNA library ... 110 7e-034
gb|CV233583.1|CV233583 WS01211.B21_J06 PT-GT-FL-A-3 Populus... 113 9e-034
gb|CK094599.1|CK094599 I044P02.3pR Populus senescing leaves... 101 8e-033
gb|DT470949.1|DT470949 WS01211.BR_J06 PT-GT-FL-A-3 Populus ... 113 4e-032
gb|AJ769616.1|AJ769616 AJ769616 Populus euphratica leaf 3-6... 104 9e-032
gb|DN485021.1|DN485021 M100H07.3pR Populus female catkins c... 108 1e-030
gb|DT516920.1|DT516920 WS02432.B21_M16 PTxD-ICC-N-A-14 Popu... 108 2e-030
gb|CA924650.1|CA924650 MTU7CL.P8.C08 Aspen leaf cDNA Librar... 99 2e-030
gb|CA924206.1|CA924206 MTU7CL.P3.A08 Aspen leaf cDNA Librar... 99 2e-030
gb|CX658325.1|CX658325 PO01012G06 Poplar SC cDNA library Po... 68 2e-029
gb|CK319970.1|CK319970 L1P09f05 Populus stem seasonal libra... 113 2e-029
gb|CV131148.1|CV131148 L1P08a03 Populus stem seasonal libra... 113 2e-029
gb|AJ771254.1|AJ771254 AJ771254 Populus euphratica leaf 3-6... 98 2e-029
gb|DT515134.1|DT515134 WS02426.B21_L20 PTxD-ICC-N-A-14 Popu... 68 3e-029
gb|CV280531.1|CV280531 WS0136.B21_K21 PTxD-IL-FL-A-4 Populu... 68 3e-029
gb|DT520508.1|DT520508 WS02447.B21_L23 PTxD-ICC-N-A-14 Popu... 68 3e-029
gb|DT517066.1|DT517066 WS02433.B21_D06 PTxD-ICC-N-A-14 Popu... 68 3e-029
gb|CX657822.1|CX657822 PO01005F12 Poplar SC cDNA library Po... 68 3e-029
gb|CV279655.1|CV279655 WS0132.B21_L23 PTxD-IL-FL-A-4 Populu... 68 3e-029
gb|CX653965.1|CX653965 PO02010H04 Poplar SC cDNA library Po... 68 3e-029
gb|CX654730.1|CX654730 PO02058G09 Poplar SC cDNA library Po... 68 3e-029
gb|AJ776674.1|AJ776674 AJ776674 Populus euphratica root 3-6... 68 3e-029
gb|CK319861.1|CK319861 L1P05g02 Populus stem seasonal libra... 112 3e-029
gb|CK320193.1|CK320193 L2P08e09 Populus stem seasonal libra... 112 3e-029
gb|CK320489.1|CK320489 L3P10d05 Populus stem seasonal libra... 112 3e-029
gb|CK319833.1|CK319833 L1P05a03 Populus stem seasonal libra... 112 3e-029
gb|CV131576.1|CV131576 L3P01b09 Populus stem seasonal libra... 112 3e-029
gb|CV131348.1|CV131348 L2P02f05 Populus stem seasonal libra... 112 3e-029
gb|CV131414.1|CV131414 L2P05f03 Populus stem seasonal libra... 112 3e-029
gb|CK320189.1|CK320189 L2P08d10 Populus stem seasonal libra... 112 3e-029
gb|CK320367.1|CK320367 L3P04c09 Populus stem seasonal libra... 112 3e-029
gb|CK320116.1|CK320116 L2P05b11 Populus stem seasonal libra... 112 3e-029
gb|CV274869.1|CV274869 WS0174.B21.1_K09 PTxD-NR-A-8 Populus... 68 4e-029
gb|CX655435.1|CX655435 PO02034G10 Poplar SC cDNA library Po... 68 5e-029
gb|AF230109.1|AF230109 Populus x canescens beta-1,3 glucana... 111 1e-028
gb|DN487228.1|DN487228 Q020G05.3pR Populus dormant bud cDNA... 111 1e-028
gb|DN487122.1|DN487122 Q010D20.3pR Populus dormant bud cDNA... 111 1e-028
gb|CV253415.1|CV253415 WS0221.B21_N21 PTxD-ICC-A-12 Populus... 68 2e-028
gb|DT524749.1|DT524749 WS02043.C21_H24 PTxN-IB-N-A-11 Popul... 109 2e-028
gb|CV131599.1|CV131599 L3P01d10 Populus stem seasonal libra... 113 2e-028
gb|CX654644.1|CX654644 PO02057D10 Poplar SC cDNA library Po... 68 8e-028
gb|CX658308.1|CX658308 PO01012E09 Poplar SC cDNA library Po... 68 8e-028
gb|DT520963.1|DT520963 WS02033.B21_A12 PTxN-IB-N-A-11 Popul... 68 3e-027
gb|DT525672.1|DT525672 WS02045.C21_P16 PTxN-IB-N-A-11 Popul... 68 3e-027
gb|CV235525.1|CV235525 WS0122.B21_H18 PT-GT-FL-A-3 Populus ... 102 3e-027
gb|CK319775.1|CK319775 L1P02h06 Populus stem seasonal libra... 113 4e-027
gb|CV131160.1|CV131160 L1P08c02 Populus stem seasonal libra... 105 4e-027
gb|BI123412.1|BI123412 I023P11P Populus leaf cDNA library P... 101 4e-027
gb|CK320450.1|CK320450 L3P08g05 Populus stem seasonal libra... 112 5e-027
gb|CK320133.1|CK320133 L2P05h03 Populus stem seasonal libra... 112 7e-027
gb|CV131356.1|CV131356 L2P02g01 Populus stem seasonal libra... 112 7e-027
gb|BU871891.1|BU871891 Q035G04 Populus flower cDNA library ... 100 1e-026
gb|CX181956.1|CX181956 D07_45-112_07.ab1 leaf inoculated wi... 68 3e-026
gb|CK320581.1|CK320581 L4P04f05 Populus stem seasonal libra... 112 4e-026
gb|CK319839.1|CK319839 L1P05b08 Populus stem seasonal libra... 112 6e-026
gb|CK320642.1|CK320642 L4P07b07 Populus stem seasonal libra... 112 6e-026
gb|CK319769.1|CK319769 L1P02g02 Populus stem seasonal libra... 61 2e-025
gb|AJ780533.1|AJ780533 AJ780533 Populus euphratica leaf 3-6... 104 2e-025
gb|DT488865.1|DT488865 WS02537.B21_K13 PT-MB-N-A-15 Populus... 99 3e-025
gb|AF186083.1|AF186083 AF186083 Populus alba x Populus trem... 107 4e-025
gb|DT519881.1|DT519881 WS02443.B21_P03 PTxD-ICC-N-A-14 Popu... 65 6e-025
gb|CX655412.1|CX655412 PO02034E04 Poplar SC cDNA library Po... 80 6e-025
gb|CX171083.1|CX171083 D03_69-66_07.ab1 leaf inoculated wit... 90 1e-024
gb|CX185631.1|CX185631 D12_45-79_08.ab1 leaf inoculated wit... 68 1e-024
gb|AJ774551.1|AJ774551 AJ774551 Populus euphratica shoot 3-... 68 2e-024
gb|CV131723.1|CV131723 L3P05b09 Populus stem seasonal libra... 106 4e-024
gb|DV465248.1|DV465248 MTUNUL1.P37.B04 NUL Populus fremonti... 67 5e-024
gb|AJ771137.1|AJ771137 AJ771137 Populus euphratica leaf 3-6... 104 5e-024
gb|DT508329.1|DT508329 WS02420.BR_K21 PTxD-ICC-N-A-14 Popul... 57 2e-023
gb|CX653447.1|CX653447 PO02002A09 Poplar SC cDNA library Po... 58 4e-023
gb|CN522213.1|CN522213 GQ0123.B3_D14 GQ012 Populus trichoca... 97 4e-023
gb|CB176580.1|CB176580 PopSC00001 Poplar SC cDNA library Po... 68 6e-023
gb|CX171639.1|CX171639 F03_69-57_11.ab1 leaf inoculated wit... 58 6e-023
gb|CX657482.1|CX657482 PO02048A06 Poplar SC cDNA library Po... 59 8e-023
gb|CN550172.1|CN550172 GQ0241.B3_C01 GQ024 Populus trichoca... 67 8e-023
gb|BI129131.1|BI129131 G086P37Y Populus cambium cDNA librar... 57 8e-023
gb|CN521471.1|CN521471 GQ0111.B3_P02 GQ011 Populus trichoca... 107 8e-023
gb|DT518432.1|DT518432 WS02438.B21_C06 PTxD-ICC-N-A-14 Popu... 57 4e-022
gb|CX653587.1|CX653587 PO02004B10 Poplar SC cDNA library Po... 59 4e-022
gb|CK094373.1|CK094373 I026P16.3pR Populus senescing leaves... 58 6e-022
gb|DV465882.1|DV465882 MTUNUL1.P44.D04 NUL Populus fremonti... 59 1e-021
gb|CX658810.1|CX658810 PO01022F03 Poplar SC cDNA library Po... 68 1e-021
gb|CN523830.1|CN523830 GQ015M09.T3_H03 GQ015 Populus tricho... 95 1e-021
gb|CK102659.1|CK102659 G086P37.5pR Populus tension wood cDN... 57 2e-021
gb|BI122406.1|BI122406 I006P30P Populus leaf cDNA library P... 81 6e-021
>gb|CN521164.1|CN521164 GQ0107.B3_F01 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0107_F01 5', mRNA sequence
Length = 611
Score = 115 bits (245), Expect(4) = 6e-035
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 118 LNYQNLFDALLDTVYAALEKSGGGSLEIVVSESGWPTAGGTGTSVDNARTYNNNLVQHVK 297
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 298 RGTPKRPG 321
Score = 31.3 bits (62), Expect(4) = 6e-035
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I N*
Sbjct: 382 EKHWGLFSPNKQPKYDINLN* 444
Score = 29.5 bits (58), Expect(4) = 6e-035
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 581 PLETFVFAMFNENQK 625
P+ET++FAMF+E+ K
Sbjct: 325 PIETYIFAMFDESNK 369
Score = 27.6 bits (54), Expect(4) = 6e-035
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 277 NVYPYFAYRDNPRDI 321
N YPYF+Y N RDI
Sbjct: 19 NSYPYFSYSLNTRDI 63
>gb|BU874016.1|BU874016 Q063D06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 691
Score = 110 bits (235), Expect(4) = 7e-034
Identities = 43/68 (63%), Positives = 53/68 (77%)
Frame = +2 / +1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
L+Y NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 268 LSYQNLFDAILDTVYAALEKSGGGSLEIVVSESGWPTAGGTGTSVDNARTYNNNLVQHVK 447
Query: 557 RGTPKRTG 580
RG+PKR G
Sbjct: 448 RGSPKRPG 471
Score = 30.9 bits (61), Expect(4) = 7e-034
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I N*
Sbjct: 532 EKHWGLFSPNKQPKYNINLN* 594
Score = 29.5 bits (58), Expect(4) = 7e-034
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 581 PLETFVFAMFNENQK 625
P+ET++FAMF+E+ K
Sbjct: 475 PIETYIFAMFDESNK 519
Score = 29.0 bits (57), Expect(4) = 7e-034
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 277 NVYPYFAYRDNPRDI 321
N+YPYF+Y N +DI
Sbjct: 169 NLYPYFSYSGNTKDI 213
>gb|CV233583.1|CV233583 WS01211.B21_J06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01211_J06 3', mRNA sequence
Length = 631
Score = 113 bits (242), Expect(4) = 9e-034
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +2 / -3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 506 LNYQNLFDALLDTVYAALEKSGGGSLEIVVSESGWPTAGGTGTSVDNARTYNNNLVQHVK 327
Query: 557 RGTPKRTG 580
+GTPKR G
Sbjct: 326 KGTPKRPG 303
Score = 31.3 bits (62), Expect(4) = 9e-034
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I N*
Sbjct: 242 EKHWGLFSPNKQPKYDINLN* 180
Score = 29.5 bits (58), Expect(4) = 9e-034
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / -3
Query: 581 PLETFVFAMFNENQK 625
P+ET++FAMF+E+ K
Sbjct: 299 PIETYIFAMFDESNK 255
Score = 24.9 bits (48), Expect(4) = 9e-034
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 277 NVYPYFAYRDNPRDI 321
N YPY +Y N RDI
Sbjct: 605 NSYPYISYSLNTRDI 561
>gb|CK094599.1|CK094599 I044P02.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I044P02 3', mRNA sequence
Length = 552
Score = 101 bits (216), Expect(4) = 8e-033
Identities = 39/66 (59%), Positives = 53/66 (80%)
Frame = +2 / -3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++DA+ AALEKAGAP++ +VVSE GWPS GG +V+NA + + LI+HV +G
Sbjct: 388 YQNLFDALLDALYAALEKAGAPDLNIVVSESGWPSEGGTATTVENAGTFYRNLINHVKQG 209
Query: 563 TPKRTG 580
TP+R+G
Sbjct: 208 TPRRSG 191
Score = 36.8 bits (74), Expect(4) = 8e-033
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1 / -3
Query: 250 RAXGXRXSPNVYPYFAYRDNPRDI 321
R G NVYPYF+YRD+P++I
Sbjct: 520 RTNGSPLLANVYPYFSYRDDPQNI 449
Score = 30.9 bits (61), Expect(4) = 8e-033
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
E++FGLF NKQP Y + F *
Sbjct: 130 EQHFGLFLPNKQPKYQLTFG* 68
Score = 26.7 bits (52), Expect(4) = 8e-033
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+EN K
Sbjct: 184 IETYLFAMFDENLK 143
>gb|DT470949.1|DT470949 WS01211.BR_J06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01211_J06 5', mRNA sequence
Length = 514
Score = 113 bits (242), Expect(4) = 4e-032
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +2 / +3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 162 LNYQNLFDALLDTVYAALEKSGGGSLEIVVSESGWPTAGGTGTSVDNARTYNNNLVQHVK 341
Query: 557 RGTPKRTG 580
+GTPKR G
Sbjct: 342 KGTPKRPG 365
Score = 29.5 bits (58), Expect(4) = 4e-032
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 581 PLETFVFAMFNENQK 625
P+ET++FAMF+E+ K
Sbjct: 369 PIETYIFAMFDESNK 413
Score = 25.8 bits (50), Expect(4) = 4e-032
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2 / +1
Query: 653 GLFYGNKQPVYPIRFN* 703
GLF NKQP Y I N*
Sbjct: 439 GLFSPNKQPKYDINLN* 489
Score = 24.9 bits (48), Expect(4) = 4e-032
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDI 321
N YPY +Y N RDI
Sbjct: 63 NSYPYISYSLNTRDI 107
>gb|AJ769616.1|AJ769616 AJ769616 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001000010H03F1, mRNA sequence
Length = 466
Score = 104 bits (222), Expect(4) = 9e-032
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +2 / -1
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AALEKAGAPN+ +VVSE GWPS GG A+VDNA + + LI+H +G
Sbjct: 301 YQNLFDALLDSLYAALEKAGAPNLNIVVSESGWPSEGGTAATVDNAGTFYRNLINHAKQG 122
Query: 563 TPKRTG 580
TP+R+G
Sbjct: 121 TPRRSG 104
Score = 35.9 bits (72), Expect(4) = 9e-032
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1 / -1
Query: 250 RAXGXRXSPNVYPYFAYRDNPRDI 321
R G NVYPYF+Y DNP+ I
Sbjct: 433 RTNGSPLLANVYPYFSYTDNPQSI 362
Score = 26.7 bits (52), Expect(4) = 9e-032
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / -1
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+EN K
Sbjct: 97 IETYLFAMFDENLK 56
Score = 25.4 bits (49), Expect(4) = 9e-032
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 641 EKNFGLFYGNKQP 679
E++FGLF NKQP
Sbjct: 43 EQHFGLFLPNKQP 5
>gb|DN485021.1|DN485021 M100H07.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M100H07 3', mRNA sequence
Length = 672
Score = 108 bits (230), Expect(4) = 1e-030
Identities = 42/68 (61%), Positives = 52/68 (76%)
Frame = +2 / -1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D + AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 432 LNYQNLFDAILDTIYAALEKSGGGSLDIVVSESGWPTAGGKGTSVDNARTYNNNLVQHVK 253
Query: 557 RGTPKRTG 580
G+PKR G
Sbjct: 252 TGSPKRPG 229
Score = 35.0 bits (70), Expect(4) = 1e-030
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / -1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EKN+GLF+ NKQP Y I N*
Sbjct: 168 EKNWGLFFPNKQPKYQIDLN* 106
Score = 27.6 bits (54), Expect(4) = 1e-030
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 581 PLETFVFAMFNENQK 625
P+ET++FAMF+E K
Sbjct: 225 PIETYIFAMFDEVNK 181
Score = 21.7 bits (41), Expect(4) = 1e-030
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1 / -1
Query: 277 NVYPYFAY 300
N+YPYF Y
Sbjct: 534 NLYPYFTY 511
>gb|DT516920.1|DT516920 WS02432.B21_M16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02432_M16 3', mRNA sequence
Length = 843
Score = 108 bits (230), Expect(3) = 2e-030
Identities = 42/68 (61%), Positives = 52/68 (76%)
Frame = +2 / -1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D + AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 522 LNYQNLFDAILDTIYAALEKSGGGSLDIVVSESGWPTAGGKGTSVDNARTYNNNLVQHVK 343
Query: 557 RGTPKRTG 580
G+PKR G
Sbjct: 342 TGSPKRPG 319
Score = 35.0 bits (70), Expect(3) = 2e-030
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / -1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EKN+GLF+ NKQP Y I N*
Sbjct: 258 EKNWGLFFPNKQPKYQIDLN* 196
Score = 27.6 bits (54), Expect(3) = 2e-030
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 581 PLETFVFAMFNENQK 625
P+ET++FAMF+E K
Sbjct: 315 PIETYIFAMFDEVNK 271
>gb|CA924650.1|CA924650 MTU7CL.P8.C08 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 630
Score = 99.1 bits (210), Expect(4) = 2e-030
Identities = 37/66 (56%), Positives = 52/66 (78%)
Frame = +2 / -2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++DA+ AALEKAGAP++ +VVSE GWPS GG +V+NA + + L++H +G
Sbjct: 299 YQNLFDALLDALYAALEKAGAPDLNIVVSESGWPSEGGTATTVENAGTFYRNLLNHAKQG 120
Query: 563 TPKRTG 580
TP+R+G
Sbjct: 119 TPRRSG 102
Score = 36.8 bits (74), Expect(4) = 2e-030
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1 / -2
Query: 250 RAXGXRXSPNVYPYFAYRDNPRDI 321
R G NVYPYF+YRD+P++I
Sbjct: 431 RTNGSPLLANVYPYFSYRDDPQNI 360
Score = 26.7 bits (52), Expect(4) = 2e-030
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / -2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+EN K
Sbjct: 95 IETYLFAMFDENLK 54
Score = 25.4 bits (49), Expect(4) = 2e-030
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 641 EKNFGLFYGNKQP 679
E++FGLF NKQP
Sbjct: 41 EQHFGLFLPNKQP 3
>gb|CA924206.1|CA924206 MTU7CL.P3.A08 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 462
Score = 99.1 bits (210), Expect(4) = 2e-030
Identities = 37/66 (56%), Positives = 52/66 (78%)
Frame = +2 / -2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++DA+ AALEKAGAP++ +VVSE GWPS GG +V+NA + + L++H +G
Sbjct: 299 YQNLFDALLDALYAALEKAGAPDLNIVVSESGWPSEGGTATTVENAGTFYRNLLNHAKQG 120
Query: 563 TPKRTG 580
TP+R+G
Sbjct: 119 TPRRSG 102
Score = 36.8 bits (74), Expect(4) = 2e-030
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1 / -2
Query: 250 RAXGXRXSPNVYPYFAYRDNPRDI 321
R G NVYPYF+YRD+P++I
Sbjct: 431 RTNGSPLLANVYPYFSYRDDPQNI 360
Score = 26.7 bits (52), Expect(4) = 2e-030
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / -2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+EN K
Sbjct: 95 IETYLFAMFDENLK 54
Score = 25.4 bits (49), Expect(4) = 2e-030
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 641 EKNFGLFYGNKQP 679
E++FGLF NKQP
Sbjct: 41 EQHFGLFLPNKQP 3
>gb|CX658325.1|CX658325 PO01012G06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01012G06 5', mRNA sequence
Length = 562
Score = 68.4 bits (143), Expect(5) = 2e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / +2
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 200 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 340
Score = 39.1 bits (79), Expect(5) = 2e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / +2
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 128 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 223
Score = 33.1 bits (66), Expect(5) = 2e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 35 NIYTYFSYSGNPRDIS 82
Score = 30.9 bits (61), Expect(5) = 2e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / +2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 347 IETYIFAMFDENQK 388
Score = 29.9 bits (59), Expect(5) = 2e-029
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRFN*LRVAD 718
EK+FG F NKQP Y + F R D
Sbjct: 401 EKHFGAFSPNKQPKYNLNFGGHRDCD 478
>gb|CK319970.1|CK319970 L1P09f05 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 746
Score = 113 bits (241), Expect(3) = 2e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 256 LNYQNLFDALLDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 435
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 436 RGTPKRPG 459
Score = 28.6 bits (56), Expect(3) = 2e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 520 EKHWGLFLPNKQPKYNINLR* 582
Score = 25.4 bits (49), Expect(3) = 2e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 157 NLYPYLSYTGNSEDI 201
>gb|CV131148.1|CV131148 L1P08a03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 702
Score = 113 bits (241), Expect(3) = 2e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 189 LNYQNLFDALLDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 368
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 369 RGTPKRPG 392
Score = 28.6 bits (56), Expect(3) = 2e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 453 EKHWGLFLPNKQPKYNINLR* 515
Score = 25.4 bits (49), Expect(3) = 2e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 90 NLYPYLSYTGNSEDI 134
>gb|AJ771254.1|AJ771254 AJ771254 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500004A03F1, mRNA sequence
Length = 521
Score = 98.2 bits (208), Expect(4) = 2e-029
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +2 / -2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AALEKAGAPN+ +VVSE G PS GG A+VDNA + + LI+H +G
Sbjct: 301 YQNLFDALLDSLYAALEKAGAPNLNIVVSESGRPSEGGTAATVDNAGTFYRNLINHAKQG 122
Query: 563 TPKRTG 580
TP+R+G
Sbjct: 121 TPRRSG 104
Score = 34.1 bits (68), Expect(4) = 2e-029
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1 / -1
Query: 250 RAXGXRXSPNVYPYFAYRDNPR 315
R G NVYPYF+Y DNP+
Sbjct: 434 RTNGSPLLANVYPYFSYTDNPQ 369
Score = 26.7 bits (52), Expect(4) = 2e-029
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / -2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+EN K
Sbjct: 97 IETYLFAMFDENLK 56
Score = 25.4 bits (49), Expect(4) = 2e-029
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 641 EKNFGLFYGNKQP 679
E++FGLF NKQP
Sbjct: 43 EQHFGLFLPNKQP 5
>gb|DT515134.1|DT515134 WS02426.B21_L20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_L20 3', mRNA sequence
Length = 929
Score = 68.4 bits (143), Expect(5) = 3e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / -3
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 489 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 349
Score = 39.1 bits (79), Expect(5) = 3e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / -3
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 561 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 466
Score = 33.1 bits (66), Expect(5) = 3e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 654 NIYTYFSYSGNPRDIS 607
Score = 30.9 bits (61), Expect(5) = 3e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 342 IETYIFAMFDENQK 301
Score = 29.5 bits (58), Expect(5) = 3e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 288 EKHFGAFSPNKQPKYNLNF 232
>gb|CV280531.1|CV280531 WS0136.B21_K21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_K21 3', mRNA sequence
Length = 893
Score = 68.4 bits (143), Expect(5) = 3e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / -2
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 484 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 344
Score = 39.1 bits (79), Expect(5) = 3e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / -2
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 556 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 461
Score = 33.1 bits (66), Expect(5) = 3e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 649 NIYTYFSYSGNPRDIS 602
Score = 30.9 bits (61), Expect(5) = 3e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / -2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 337 IETYIFAMFDENQK 296
Score = 29.5 bits (58), Expect(5) = 3e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -2
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 283 EKHFGAFSPNKQPKYNLNF 227
>gb|DT520508.1|DT520508 WS02447.B21_L23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02447_L23 3', mRNA sequence
Length = 824
Score = 68.4 bits (143), Expect(5) = 3e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / -2
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 490 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 350
Score = 39.1 bits (79), Expect(5) = 3e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / -2
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 562 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 467
Score = 33.1 bits (66), Expect(5) = 3e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 655 NIYTYFSYSGNPRDIS 608
Score = 30.9 bits (61), Expect(5) = 3e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / -2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 343 IETYIFAMFDENQK 302
Score = 29.5 bits (58), Expect(5) = 3e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -2
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 289 EKHFGAFSPNKQPKYNLNF 233
>gb|DT517066.1|DT517066 WS02433.B21_D06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_D06 3', mRNA sequence
Length = 777
Score = 68.4 bits (143), Expect(5) = 3e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / -2
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 488 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 348
Score = 39.1 bits (79), Expect(5) = 3e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / -2
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 560 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 465
Score = 33.1 bits (66), Expect(5) = 3e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 653 NIYTYFSYSGNPRDIS 606
Score = 30.9 bits (61), Expect(5) = 3e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / -2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 341 IETYIFAMFDENQK 300
Score = 29.5 bits (58), Expect(5) = 3e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -2
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 287 EKHFGAFSPNKQPKYNLNF 231
>gb|CX657822.1|CX657822 PO01005F12 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01005F12 5', mRNA sequence
Length = 744
Score = 68.4 bits (143), Expect(5) = 3e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / +2
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 299 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 439
Score = 39.1 bits (79), Expect(5) = 3e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / +2
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 227 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 322
Score = 33.1 bits (66), Expect(5) = 3e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 134 NIYTYFSYSGNPRDIS 181
Score = 30.9 bits (61), Expect(5) = 3e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / +2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 446 IETYIFAMFDENQK 487
Score = 29.5 bits (58), Expect(5) = 3e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 500 EKHFGAFSPNKQPKYNLNF 556
>gb|CV279655.1|CV279655 WS0132.B21_L23 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0132_L23 3', mRNA sequence
Length = 684
Score = 68.4 bits (143), Expect(5) = 3e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / -3
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 493 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 353
Score = 39.1 bits (79), Expect(5) = 3e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / -3
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 565 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 470
Score = 33.1 bits (66), Expect(5) = 3e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 658 NIYTYFSYSGNPRDIS 611
Score = 30.9 bits (61), Expect(5) = 3e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 346 IETYIFAMFDENQK 305
Score = 29.5 bits (58), Expect(5) = 3e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 292 EKHFGAFSPNKQPKYNLNF 236
>gb|CX653965.1|CX653965 PO02010H04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02010H04 5', mRNA sequence
Length = 630
Score = 68.4 bits (143), Expect(5) = 3e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / +2
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 269 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 409
Score = 39.1 bits (79), Expect(5) = 3e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / +2
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 197 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 292
Score = 33.1 bits (66), Expect(5) = 3e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 104 NIYTYFSYSGNPRDIS 151
Score = 30.9 bits (61), Expect(5) = 3e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / +2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 416 IETYIFAMFDENQK 457
Score = 29.5 bits (58), Expect(5) = 3e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 470 EKHFGAFSPNKQPKYNLNF 526
>gb|CX654730.1|CX654730 PO02058G09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02058G09 5', mRNA sequence
Length = 599
Score = 68.4 bits (143), Expect(5) = 3e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / +3
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 306 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 446
Score = 39.1 bits (79), Expect(5) = 3e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / +3
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 234 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 329
Score = 33.1 bits (66), Expect(5) = 3e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 141 NIYTYFSYSGNPRDIS 188
Score = 30.9 bits (61), Expect(5) = 3e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / +3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 453 IETYIFAMFDENQK 494
Score = 29.5 bits (58), Expect(5) = 3e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 507 EKHFGAFSPNKQPKYNLNF 563
>gb|AJ776674.1|AJ776674 AJ776674 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400016H11F1, mRNA sequence
Length = 595
Score = 68.4 bits (143), Expect(5) = 3e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / +3
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 207 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 347
Score = 39.1 bits (79), Expect(5) = 3e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / +3
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 135 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 230
Score = 33.1 bits (66), Expect(5) = 3e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 42 NIYTYFSYSGNPRDIS 89
Score = 30.9 bits (61), Expect(5) = 3e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / +3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 354 IETYIFAMFDENQK 395
Score = 29.5 bits (58), Expect(5) = 3e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 408 EKHFGAFSPNKQPKYNLNF 464
>gb|CK319861.1|CK319861 L1P05g02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 843
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 384 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 563
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 564 RGTPKRPG 587
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 648 EKHWGLFLPNKQPKYNINLR* 710
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 285 NLYPYLSYTGNSEDI 329
>gb|CK320193.1|CK320193 L2P08e09 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 838
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +2
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 350 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 529
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 530 RGTPKRPG 553
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 614 EKHWGLFLPNKQPKYNINLR* 676
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 251 NLYPYLSYTGNSEDI 295
>gb|CK320489.1|CK320489 L3P10d05 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 758
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 427 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 606
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 607 RGTPKRPG 630
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 691 EKHWGLFLPNKQPKYNINLR* 753
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 328 NLYPYLSYTGNSEDI 372
>gb|CK319833.1|CK319833 L1P05a03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 756
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 292 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 471
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 472 RGTPKRPG 495
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 556 EKHWGLFLPNKQPKYNINLR* 618
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 193 NLYPYLSYTGNSEDI 237
>gb|CV131576.1|CV131576 L3P01b09 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 745
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 292 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 471
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 472 RGTPKRPG 495
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 556 EKHWGLFLPNKQPKYNINLR* 618
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 193 NLYPYLSYTGNSEDI 237
>gb|CV131348.1|CV131348 L2P02f05 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 741
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 252 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 431
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 432 RGTPKRPG 455
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 516 EKHWGLFLPNKQPKYNINLR* 578
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 153 NLYPYLSYTGNSEDI 197
>gb|CV131414.1|CV131414 L2P05f03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 739
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 249 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 428
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 429 RGTPKRPG 452
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 513 EKHWGLFLPNKQPKYNINLR* 575
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 150 NLYPYLSYTGNSEDI 194
>gb|CK320189.1|CK320189 L2P08d10 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 737
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 247 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 426
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 427 RGTPKRPG 450
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 511 EKHWGLFLPNKQPKYNINLR* 573
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 148 NLYPYLSYTGNSEDI 192
>gb|CK320367.1|CK320367 L3P04c09 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 706
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 217 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 396
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 397 RGTPKRPG 420
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 481 EKHWGLFLPNKQPKYNINLR* 543
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 118 NLYPYLSYTGNSEDI 162
>gb|CK320116.1|CK320116 L2P05b11 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 674
Score = 112 bits (240), Expect(3) = 3e-029
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +2
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 344 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 523
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 524 RGTPKRPG 547
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 608 EKHWGLFLPNKQPKYNINLR* 670
Score = 25.4 bits (49), Expect(3) = 3e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 245 NLYPYLSYTGNSEDI 289
>gb|CV274869.1|CV274869 WS0174.B21.1_K09 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_K09 3', mRNA sequence
Length = 842
Score = 68.4 bits (143), Expect(5) = 4e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / -3
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 486 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 346
Score = 38.6 bits (78), Expect(5) = 4e-029
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2 / -3
Query: 374 GLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 555 GRGYQNLFDAMLDSLYSALERLGGGNTLDVV 463
Score = 33.1 bits (66), Expect(5) = 4e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / -3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 651 NIYTYFSYSGNPRDIS 604
Score = 30.9 bits (61), Expect(5) = 4e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 339 IETYIFAMFDENQK 298
Score = 29.5 bits (58), Expect(5) = 4e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 285 EKHFGAFSPNKQPKYNLNF 229
>gb|CX655435.1|CX655435 PO02034G10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02034G10 5', mRNA sequence
Length = 621
Score = 68.4 bits (143), Expect(5) = 5e-029
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / +3
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 357 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 497
Score = 39.1 bits (79), Expect(5) = 5e-029
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / +3
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 285 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 380
Score = 33.1 bits (66), Expect(5) = 5e-029
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 192 NIYTYFSYSGNPRDIS 239
Score = 30.9 bits (61), Expect(5) = 5e-029
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / +3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 504 IETYIFAMFDENQK 545
Score = 28.6 bits (56), Expect(5) = 5e-029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 558 EKHFGAFSPNKQP*YNLNF 614
>gb|AF230109.1|AF230109 Populus x canescens beta-1,3 glucanase (BGLUC) mRNA, complete cds
Length = 1252
Score = 111 bits (237), Expect(3) = 1e-028
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +2 / +2
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 749 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 928
Query: 557 RGTPKRTG 580
RGTPK+ G
Sbjct: 929 RGTPKKPG 952
Score = 27.6 bits (54), Expect(3) = 1e-028
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++G+F NKQP Y I *
Sbjct: 1013 EKHWGIFLPNKQPKYNINLR* 1075
Score = 25.4 bits (49), Expect(3) = 1e-028
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 650 NLYPYLSYTGNSEDI 694
>gb|DN487228.1|DN487228 Q020G05.3pR Populus dormant bud cDNA library Populus tremula cDNA
clone Q020G05 3', mRNA sequence
Length = 814
Score = 111 bits (237), Expect(3) = 1e-028
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +2 / -3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 485 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 306
Query: 557 RGTPKRTG 580
RGTPK+ G
Sbjct: 305 RGTPKKPG 282
Score = 27.6 bits (54), Expect(3) = 1e-028
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++G+F NKQP Y I *
Sbjct: 221 EKHWGIFLPNKQPKYNINLR* 159
Score = 25.4 bits (49), Expect(3) = 1e-028
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -3
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 584 NLYPYLSYTGNSEDI 540
>gb|DN487122.1|DN487122 Q010D20.3pR Populus dormant bud cDNA library Populus tremula cDNA
clone Q010D20 3', mRNA sequence
Length = 784
Score = 111 bits (237), Expect(3) = 1e-028
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +2 / -1
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 493 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 314
Query: 557 RGTPKRTG 580
RGTPK+ G
Sbjct: 313 RGTPKKPG 290
Score = 27.6 bits (54), Expect(3) = 1e-028
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2 / -1
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++G+F NKQP Y I *
Sbjct: 229 EKHWGIFLPNKQPKYNINLR* 167
Score = 25.4 bits (49), Expect(3) = 1e-028
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -1
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 592 NLYPYLSYTGNSEDI 548
>gb|CV253415.1|CV253415 WS0221.B21_N21 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_N21 3', mRNA sequence
Length = 722
Score = 68.4 bits (143), Expect(5) = 2e-028
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / -1
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 515 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 375
Score = 39.1 bits (79), Expect(5) = 2e-028
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / -1
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 587 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 492
Score = 30.9 bits (61), Expect(5) = 2e-028
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / -1
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 368 IETYIFAMFDENQK 327
Score = 29.9 bits (59), Expect(5) = 2e-028
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y Y +Y NPRDIS
Sbjct: 680 NIYTYXSYSGNPRDIS 633
Score = 29.5 bits (58), Expect(5) = 2e-028
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -1
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 314 EKHFGAFSPNKQPKYNLNF 258
>gb|DT524749.1|DT524749 WS02043.C21_H24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02043_H24 3', mRNA sequence
Length = 758
Score = 109 bits (233), Expect(3) = 2e-028
Identities = 43/68 (63%), Positives = 53/68 (77%)
Frame = +2 / -2
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 655 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 476
Query: 557 RGTPKRTG 580
RG+PK+ G
Sbjct: 475 RGSPKKPG 452
Score = 28.6 bits (56), Expect(3) = 2e-028
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / -2
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 391 EKHWGLFLPNKQPKYNINLR* 329
Score = 25.4 bits (49), Expect(3) = 2e-028
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / -2
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 754 NLYPYLSYTGNSEDI 710
>gb|CV131599.1|CV131599 L3P01d10 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 483
Score = 113 bits (241), Expect(3) = 2e-028
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 180 LNYQNLFDALLDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 359
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 360 RGTPKRPG 383
Score = 25.4 bits (49), Expect(3) = 2e-028
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 81 NLYPYLSYTGNSEDI 125
Score = 24.9 bits (48), Expect(3) = 2e-028
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQP 679
EK++GLF NKQP
Sbjct: 444 EKHWGLFLPNKQP 482
>gb|CX654644.1|CX654644 PO02057D10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02057D10 5', mRNA sequence
Length = 698
Score = 68.4 bits (143), Expect(5) = 8e-028
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / +3
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 324 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 464
Score = 39.1 bits (79), Expect(5) = 8e-028
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / +3
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 252 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 347
Score = 30.9 bits (61), Expect(5) = 8e-028
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / +3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 471 IETYIFAMFDENQK 512
Score = 29.5 bits (58), Expect(5) = 8e-028
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 525 EKHFGAFSPNKQPKYNLNF 581
Score = 28.1 bits (55), Expect(5) = 8e-028
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NP +IS
Sbjct: 159 NIYTYFSYSGNPGEIS 206
>gb|CX658308.1|CX658308 PO01012E09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01012E09 5', mRNA sequence
Length = 568
Score = 68.4 bits (143), Expect(5) = 8e-028
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / +2
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 329 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 469
Score = 39.1 bits (79), Expect(5) = 8e-028
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / +2
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 257 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 352
Score = 33.1 bits (66), Expect(5) = 8e-028
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDIS 324
N+Y YF+Y NPRDIS
Sbjct: 164 NIYTYFSYSGNPRDIS 211
Score = 30.9 bits (61), Expect(5) = 8e-028
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / +2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 476 IETYIFAMFDENQK 517
Score = 24.4 bits (47), Expect(5) = 8e-028
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQP 679
EK+FG F NKQP
Sbjct: 530 EKHFGAFSPNKQP 568
>gb|DT520963.1|DT520963 WS02033.B21_A12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02033_A12 3', mRNA sequence
Length = 648
Score = 68.4 bits (143), Expect(5) = 3e-027
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / -3
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 493 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 353
Score = 39.1 bits (79), Expect(5) = 3e-027
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / -3
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 565 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 470
Score = 30.9 bits (61), Expect(5) = 3e-027
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 346 IETYIFAMFDENQK 305
Score = 29.5 bits (58), Expect(5) = 3e-027
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 292 EKHFGAFSPNKQPKYNLNF 236
Score = 26.3 bits (51), Expect(5) = 3e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 289 YFAYRDNPRDIS 324
YF+Y NPRDIS
Sbjct: 646 YFSYSGNPRDIS 611
>gb|DT525672.1|DT525672 WS02045.C21_P16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02045_P16 3', mRNA sequence
Length = 648
Score = 68.4 bits (143), Expect(5) = 3e-027
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = +2 / -3
Query: 440 GAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTG 580
G + VVVSE GWPSAGGFG + DNA Y LI HV GTPKR G
Sbjct: 493 GGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPG 353
Score = 39.1 bits (79), Expect(5) = 3e-027
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / -3
Query: 371 NGLNYNNLFDAMVDAVVAALEKAGAPNVRVVV 466
+G Y NLFDAM+D++ +ALE+ G N VV
Sbjct: 565 SGRGYQNLFDAMLDSLYSALERLGGGNTLDVV 470
Score = 30.9 bits (61), Expect(5) = 3e-027
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+ENQK
Sbjct: 346 IETYIFAMFDENQK 305
Score = 29.5 bits (58), Expect(5) = 3e-027
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
EK+FG F NKQP Y + F
Sbjct: 292 EKHFGAFSPNKQPKYNLNF 236
Score = 26.3 bits (51), Expect(5) = 3e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 289 YFAYRDNPRDIS 324
YF+Y NPRDIS
Sbjct: 646 YFSYSGNPRDIS 611
>gb|CV235525.1|CV235525 WS0122.B21_H18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0122_H18 3', mRNA sequence
Length = 544
Score = 102 bits (217), Expect(3) = 3e-027
Identities = 39/66 (59%), Positives = 53/66 (80%)
Frame = +2 / -3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++D++ AALEKAGAP++ +VVSE GWPS GG A+ DNA + + LI+HV +G
Sbjct: 455 YQNLFDALLDSLYAALEKAGAPDLNIVVSESGWPSEGGTAATADNAGTFYRNLINHVKQG 276
Query: 563 TPKRTG 580
TP+R+G
Sbjct: 275 TPRRSG 258
Score = 30.9 bits (61), Expect(3) = 3e-027
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
E++FGLF NKQP Y + F *
Sbjct: 197 EQHFGLFLPNKQPKYQLTFG* 135
Score = 26.7 bits (52), Expect(3) = 3e-027
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / -3
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+EN K
Sbjct: 251 IETYLFAMFDENLK 210
>gb|CK319775.1|CK319775 L1P02h06 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 622
Score = 113 bits (241), Expect(2) = 4e-027
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 132 LNYQNLFDALLDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 311
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 312 RGTPKRPG 335
Score = 28.6 bits (56), Expect(2) = 4e-027
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 396 EKHWGLFLPNKQPKYNINLR* 458
>gb|CV131160.1|CV131160 L1P08c02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 729
Score = 105 bits (224), Expect(3) = 4e-027
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +2 / +2
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AG SVDNAR YN L+ HV
Sbjct: 227 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGETETSVDNARIYNNNLVQHVK 406
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 407 RGTPKRPG 430
Score = 28.6 bits (56), Expect(3) = 4e-027
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 491 EKHWGLFLPNKQPKYNINLR* 553
Score = 25.4 bits (49), Expect(3) = 4e-027
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDNPRDI 321
N+YPY +Y N DI
Sbjct: 128 NLYPYLSYTGNSEDI 172
>gb|BI123412.1|BI123412 I023P11P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 471
Score = 101 bits (216), Expect(3) = 4e-027
Identities = 39/66 (59%), Positives = 53/66 (80%)
Frame = +2 / +2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA++DA+ AALEKAGAP++ +VVSE GWPS GG +V+NA + + LI+HV +G
Sbjct: 41 YQNLFDALLDALYAALEKAGAPDLNIVVSESGWPSEGGTATTVENAGTFYRNLINHVKQG 220
Query: 563 TPKRTG 580
TP+R+G
Sbjct: 221 TPRRSG 238
Score = 30.9 bits (61), Expect(3) = 4e-027
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
E++FGLF NKQP Y + F *
Sbjct: 299 EQHFGLFLPNKQPKYQLTFG* 361
Score = 26.7 bits (52), Expect(3) = 4e-027
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2 / +2
Query: 584 LETFVFAMFNENQK 625
+ET++FAMF+EN K
Sbjct: 245 IETYLFAMFDENLK 286
>gb|CK320450.1|CK320450 L3P08g05 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 721
Score = 112 bits (240), Expect(2) = 5e-027
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +2 / +3
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
LNY NLFDA++D V AALEK+G ++ +VVSE GWP+AGG G SVDNAR YN L+ HV
Sbjct: 111 LNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVK 290
Query: 557 RGTPKRTG 580
RGTPKR G
Sbjct: 291 RGTPKRPG 314
Score = 28.6 bits (56), Expect(2) = 5e-027
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRFN* 703
EK++GLF NKQP Y I *
Sbjct: 375 EKHWGLFLPNKQPKYNINLR* 437
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 293,407,214
Number of Sequences: 369679
Number of extensions: 3163850
Number of successful extensions: 20607
Number of sequences better than 1.0e-020: 99
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 11853417520
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)