TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.22
(333 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU835778.1|BU835778 T078E10 Populus apical shoot cDNA li... 84 4e-016
gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA libr... 83 8e-016
gb|CV263577.1|CV263577 WS02022.B21_D16 PTxN-IB-N-A-11 Popul... 83 8e-016
gb|CV274297.1|CV274297 WS0172.B21_N05 PTxD-NR-A-8 Populus t... 83 8e-016
gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus t... 83 8e-016
gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus t... 83 8e-016
gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Popu... 83 8e-016
gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Po... 82 1e-015
gb|CV130609.1|CV130609 B9SP06h03 Populus stem seasonal libr... 82 1e-015
gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus t... 82 1e-015
gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leave... 82 2e-015
gb|BP932598.1|BP932598 BP932598 full-length enriched poplar... 82 2e-015
gb|BP933409.1|BP933409 BP933409 full-length enriched poplar... 82 2e-015
gb|CA927840.1|CA927840 MTU6TR.P13.E11 Aspen root cDNA Libra... 81 3e-015
gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populu... 81 3e-015
gb|CV273187.1|CV273187 WS0171.B21_P05 PTxD-NR-A-8 Populus t... 81 3e-015
gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Po... 81 3e-015
gb|DN485248.1|DN485248 M122A11.3pR Populus female catkins c... 81 3e-015
gb|BU884706.1|BU884706 R014D05 Populus root cDNA library Po... 80 4e-015
gb|DN487906.1|DN487906 R014D05.3pR Populus root cDNA librar... 80 4e-015
gb|DN497580.1|DN497580 R014D05.5pR Populus root cDNA librar... 80 4e-015
gb|DN484727.1|DN484727 K011P14.3pR Populus apical shoot cDN... 79 1e-014
gb|BU823778.1|BU823778 UB56BPD10 Populus tremula cambium cD... 78 2e-014
gb|CK097608.1|CK097608 UB56BPD10.3pR Populus active cambium... 78 2e-014
gb|CK107403.1|CK107403 UB56BPD10.5pR Populus active cambium... 78 2e-014
gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDN... 78 2e-014
gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA librar... 71 2e-012
gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Popul... 71 3e-012
gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Popul... 71 3e-012
gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library... 71 3e-012
gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus t... 71 3e-012
gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA librar... 70 6e-012
gb|BU810699.1|BU810699 UL74PC01 Populus leaf cDNA library P... 70 6e-012
gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid lib... 70 6e-012
gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus... 70 6e-012
gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated wi... 70 6e-012
gb|CX174556.1|CX174556 D10_69-87_08.ab1 leaf inoculated wit... 70 6e-012
gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Popul... 70 6e-012
gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Popu... 70 6e-012
gb|CN521503.1|CN521503 GQ0112.B3_H14 GQ011 Populus trichoca... 69 1e-011
gb|CV235854.1|CV235854 WS01221.B21_N19 PT-GT-FL-A-3 Populus... 66 2e-011
gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichoca... 68 2e-011
gb|CX172845.1|CX172845 B09_69-15_03.ab1 leaf inoculated wit... 68 2e-011
gb|BU830429.1|BU830429 T008B12 Populus apical shoot cDNA li... 68 3e-011
gb|CK092448.1|CK092448 G084P08.3pR Populus tension wood cDN... 68 3e-011
gb|DN492359.1|DN492359 X010D05.3pR Populus wood cDNA librar... 68 3e-011
gb|BU897636.1|BU897636 X060G07 Populus wood cDNA library Po... 67 5e-011
gb|BU895722.1|BU895722 X030A11 Populus wood cDNA library Po... 66 7e-011
gb|BU897666.1|BU897666 X062F01 Populus wood cDNA library Po... 66 7e-011
gb|CX173794.1|CX173794 G02_69-78_14.ab1 leaf inoculated wit... 66 1e-010
gb|CX174182.1|CX174182 C09_69-41_05.ab1 leaf inoculated wit... 66 1e-010
gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus tricho... 62 1e-009
gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA librar... 61 3e-009
gb|DN494199.1|DN494199 K011P14.5pR Populus apical shoot cDN... 60 6e-009
gb|BU866366.1|BU866366 S066A01 Populus imbibed seed cDNA li... 56 1e-007
gb|BU866847.1|BU866847 S071D12 Populus imbibed seed cDNA li... 56 1e-007
gb|BI123670.1|BI123670 I026P86P Populus leaf cDNA library P... 53 7e-007
gb|BI125497.1|BI125497 I062P10P Populus leaf cDNA library P... 53 7e-007
gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated wit... 53 7e-007
gb|DN487045.1|DN487045 Q001H08.3pR Populus dormant bud cDNA... 53 7e-007
gb|CK094390.1|CK094390 I026P86.3pR Populus senescing leaves... 52 1e-006
gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated wit... 45 2e-004
gb|DN498729.1|DN498729 S066G12.5pR Populus imbibed seed cDN... 42 0.002
gb|BI130255.1|BI130255 G102P91Y Populus cambium cDNA librar... 41 0.003
gb|CK102593.1|CK102593 G084P08.5pR Populus tension wood cDN... 41 0.003
gb|BU866443.1|BU866443 S066G12 Populus imbibed seed cDNA li... 40 0.005
gb|CV278014.1|CV278014 WS0145.B21_D07 PTxD-IL-A-5 Populus t... 40 0.007
gb|AJ772217.1|AJ772217 AJ772217 Populus euphratica shoot in... 36 0.095
gb|CX657346.1|CX657346 PO02042F10 Poplar SC cDNA library Po... 34 0.47
gb|CV244460.1|CV244460 WS0254.B21_L17 PT-MB-N-A-15 Populus ... 33 0.64
gb|CA822031.1|CA822031 R02H05 two-month-old roots from clon... 31 2.3
gb|CX176223.1|CX176223 G01_69-22_13.ab1 leaf inoculated wit... 31 2.3
gb|CV237297.1|CV237297 WS01227.B21.1_E17 PT-GT-FL-A-3 Popul... 31 3.1
gb|CV242330.1|CV242330 WS02514.B21.1_M09 PT-MB-N-A-15 Popul... 31 3.1
gb|CV244677.1|CV244677 WS0255.B21_E24 PT-MB-N-A-15 Populus ... 31 3.1
gb|CV256208.1|CV256208 WS0243.B21_D16 PTxD-ICC-N-A-14 Popul... 31 3.1
gb|DT472689.1|DT472689 WS01227.BR.1_E17 PT-GT-FL-A-3 Populu... 31 3.1
gb|DT523223.1|DT523223 WS02039.B21_C04 PTxN-IB-N-A-11 Popul... 31 3.1
gb|BI135884.1|BI135884 F059P74Y Populus flower cDNA library... 31 3.1
gb|CA927289.1|CA927289 MTU6CR.P7.B12 Aspen root cDNA Librar... 31 3.1
gb|CX174383.1|CX174383 B12_69-46_04.ab1 leaf inoculated wit... 31 3.1
gb|CX176986.1|CX176986 F10_69-101_12.ab1 leaf inoculated wi... 31 3.1
gb|CA822369.1|CA822369 R07C10 two-month-old roots from clon... 30 4.3
gb|CV231806.1|CV231806 WS0195.B21_J23 PT-DX-N-A-10 Populus ... 30 4.3
gb|CV244389.1|CV244389 WS0254.B21_I09 PT-MB-N-A-15 Populus ... 30 4.3
gb|BU879983.1|BU879983 UM39TH12 Populus flower cDNA library... 30 5.9
gb|BU883643.1|BU883643 UM95TD06 Populus flower cDNA library... 30 5.9
gb|BU893582.1|BU893582 P079F09 Populus petioles cDNA librar... 30 5.9
gb|CK105271.1|CK105271 I079P81.5pR Populus senescing leaves... 30 5.9
gb|DT495664.1|DT495664 WS01121.BR_C05 PT-P-FL-A-2 Populus t... 30 5.9
gb|DT499994.1|DT499994 WS9991.BR_O19 PT-P-FL-A-2 Populus tr... 30 5.9
gb|BU829307.1|BU829307 K038P16P Populus apical shoot cDNA l... 29 8.1
gb|BU875277.1|BU875277 V004CE09 Populus flower cDNA library... 29 8.1
gb|BU891716.1|BU891716 P054C08 Populus petioles cDNA librar... 29 8.1
gb|CA934538.1|CA934538 MTU3TS.P9.B03 Aspen stem cDNA Librar... 29 8.1
gb|CK113935.1|CK113935 V004E09 Populus male catkins cDNA li... 29 8.1
>gb|BU835778.1|BU835778 T078E10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 522
Score = 83.5 bits (176), Expect = 4e-016
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G+NV+GY+ W+L D+FEW AG+T R+G++Y+D NN RYMK SA W K F
Sbjct: 165 GANVKGYYQWALWDDFEWDAGYTVRFGMIYIDFKNNLKRYMKYSAYWFKMF 317
Score = 29.5 bits (58), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1 / +2
Query: 13 CARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ*LHALHEGVCQVVERV 156
C +L + G+ *M C ++R WH L Q+ +HE + +V+ V
Sbjct: 173 CEGILSMGIMGRF*MGCWIYRPFWHDLY*FQEQFKEIHEILGVLVQDV 316
>gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F008P84 3', mRNA sequence
Length = 793
Score = 82.6 bits (174), Expect = 8e-016
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+GYFAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 429 GVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFMRF 277
Score = 40.5 bits (82), Expect = 0.004
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / +2
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 278 NRMNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKYPFTCTP 430
>gb|CV263577.1|CV263577 WS02022.B21_D16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02022_D16 3', mRNA sequence
Length = 448
Score = 82.6 bits (174), Expect = 8e-016
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+GYFAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 448 GVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFMRF 296
Score = 38.6 bits (78), Expect = 0.014
Identities = 24/48 (50%), Positives = 25/48 (52%)
Frame = -1 / +3
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCT 13
N N A+ F R L ST T P R V P HSKLSS D AK P T
Sbjct: 297 NRMNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKYPFT 440
>gb|CV274297.1|CV274297 WS0172.B21_N05 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0172_N05 3', mRNA sequence
Length = 878
Score = 82.6 bits (174), Expect = 8e-016
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G +V+G+FAWSL+DNFEW +G+ R+G+ YVD N+ RY K+S KW K+F
Sbjct: 562 GVDVKGFFAWSLMDNFEWGSGYAVRFGLYYVDYKNDLKRYPKQSVKWFKQF 410
Score = 42.8 bits (87), Expect = 8e-004
Identities = 24/51 (47%), Positives = 27/51 (52%)
Frame = -1 / +3
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N NHL D R + L ST* P + P HSKLS +DQAK P T P
Sbjct: 411 NCLNHLTDCLGYRFKSFL*ST**RPNLTA*PLPHSKLSIKDQAKNPLTSTP 563
>gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_A18 3', mRNA sequence
Length = 916
Score = 82.6 bits (174), Expect = 8e-016
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+GYFAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 504 GVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFMRF 352
Score = 40.5 bits (82), Expect = 0.004
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / +2
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 353 NRMNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKYPFTCTP 505
>gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_D09 3', mRNA sequence
Length = 885
Score = 82.6 bits (174), Expect = 8e-016
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+GYFAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 481 GVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFMRF 329
Score = 40.5 bits (82), Expect = 0.004
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / +3
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 330 NRMNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKYPFTCTP 482
>gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_K04 3', mRNA sequence
Length = 910
Score = 82.6 bits (174), Expect = 8e-016
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+GYFAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 335 GVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFMRF 183
Score = 40.5 bits (82), Expect = 0.004
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / +1
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 184 NRMNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKYPFTCTP 336
>gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 668
Score = 82.2 bits (173), Expect = 1e-015
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+GYFAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 213 GVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFLRF 365
Score = 39.1 bits (79), Expect = 0.010
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / -2
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 364 NRKNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKYPFTCTP 212
>gb|CV130609.1|CV130609 B9SP06h03 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 742
Score = 82.2 bits (173), Expect = 1e-015
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+GYFAWSLLDNFEW G+T+R+G+VYVD N R+ K SA W F
Sbjct: 347 GVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLARHPKSSAYWFMRF 499
Score = 41.4 bits (84), Expect = 0.002
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / -2
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 498 NRMNQ*AEDFGCRASPFL*STYTKPKRLV*P*AHSKLSSNDHAKYPFTCTP 346
>gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_O23 3', mRNA sequence
Length = 914
Score = 82.2 bits (173), Expect = 1e-015
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+GYFAWSLLDNFEW G+T+R+G+VYVD N R+ K SA W F
Sbjct: 449 GVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLARHPKSSAYWFMRF 297
Score = 41.4 bits (84), Expect = 0.002
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / +1
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 298 NRMNQ*AEDFGCRASPFL*STYTKPKRLV*P*AHSKLSSNDHAKYPFTCTP 450
>gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C092P56 3', mRNA sequence
Length = 543
Score = 81.7 bits (172), Expect = 2e-015
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G+NV+GY+ W+ D+FEW AG+T R+G++Y+D NN RYMK SA W K F
Sbjct: 324 GANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDFKNNLKRYMKYSAYWFKMF 172
>gb|BP932598.1|BP932598 BP932598 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-038_A02.r 3', mRNA sequence
Length = 644
Score = 81.7 bits (172), Expect = 2e-015
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G+NV+GY+ W+ D+FEW AG+T R+G++Y+D NN RYMK SA W K F
Sbjct: 409 GANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDFKNNLKRYMKYSAYWFKMF 257
>gb|BP933409.1|BP933409 BP933409 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-051_A15.r 3', mRNA sequence
Length = 564
Score = 81.7 bits (172), Expect = 2e-015
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G+NV+GY+ W+ D+FEW AG+T R+G++Y+D NN RYMK SA W K F
Sbjct: 407 GANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDFKNNLKRYMKYSAYWFKMF 255
>gb|CA927840.1|CA927840 MTU6TR.P13.E11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 407
Score = 80.8 bits (170), Expect = 3e-015
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLK 151
G+NV+ Y+ WS LD+FEW AG+T R+G+ YVD NN RY+K SA+W +
Sbjct: 254 GANVKAYYIWSFLDDFEWDAGYTVRFGVTYVDFKNNLKRYLKSSARWFQ 108
Score = 51.5 bits (106), Expect = 2e-006
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = -1 / +1
Query: 177 LGFFAVLNSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRD 34
L F+ + S+NHLA+ F R +L L+ST* P R+V PA+HSK S D
Sbjct: 82 LKFYFLSKSWNHLAELFRYRFKLFLKST*VTPKRTV*PASHSKSSKND 225
>gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_F08 3', mRNA sequence
Length = 879
Score = 80.8 bits (170), Expect = 3e-015
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKK 172
G V+GYFAWS LD+FEW +G+T R+GI+Y+D N R K SA+W K F KK
Sbjct: 411 GVKVKGYFAWSFLDDFEWNSGYTVRFGIIYIDYKNGLKRIPKLSARWFKNFLEKKK 244
Score = 36.8 bits (74), Expect = 0.050
Identities = 23/56 (41%), Positives = 26/56 (46%)
Frame = -1 / +2
Query: 171 FFAVLNSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
FF NH A+SF L S * +P +V P HSK S D AK P T P
Sbjct: 245 FFFSRKFLNHRAESFGILFNPFL*SM*MIPNLTV*PEFHSKSSKNDHAKYPFTLTP 412
>gb|CV273187.1|CV273187 WS0171.B21_P05 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_P05 3', mRNA sequence
Length = 600
Score = 80.8 bits (170), Expect = 3e-015
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKK 172
G V+GYFAWS LD+FEW +G+T R+GI+Y+D N R K SA+W K F KK
Sbjct: 389 GVKVKGYFAWSFLDDFEWNSGYTVRFGIIYIDYKNGLKRIPKLSARWFKNFLEKKK 222
Score = 36.8 bits (74), Expect = 0.050
Identities = 23/56 (41%), Positives = 26/56 (46%)
Frame = -1 / +1
Query: 171 FFAVLNSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
FF NH A+SF L S * +P +V P HSK S D AK P T P
Sbjct: 223 FFFSRKFLNHRAESFGILFNPFL*SM*MIPNLTV*PEFHSKSSKNDHAKYPFTLTP 390
>gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02015A05 5', mRNA sequence
Length = 614
Score = 80.8 bits (170), Expect = 3e-015
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLK 151
G+NV+ Y+ WS LD+FEW AG+T R+G+ YVD NN RY+K SA+W +
Sbjct: 301 GANVKAYYIWSFLDDFEWDAGYTVRFGVTYVDFKNNLKRYLKSSARWFQ 155
Score = 51.5 bits (106), Expect = 2e-006
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = -1 / +3
Query: 177 LGFFAVLNSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRD 34
L F+ + S+NHLA+ F R +L L+ST* P R+V PA+HSK S D
Sbjct: 129 LKFYFLSKSWNHLAELFRYRFKLFLKST*VTPKRTV*PASHSKSSKND 272
>gb|DN485248.1|DN485248 M122A11.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M122A11 3', mRNA sequence
Length = 821
Score = 80.8 bits (170), Expect = 3e-015
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G +V+G+FAWS LD+FEW +G+ R+G+ Y+D NN RY K S KW K+F
Sbjct: 587 GVDVKGFFAWSFLDDFEWGSGYGSRFGLFYIDYENNLKRYAKNSVKWFKQF 435
Score = 33.6 bits (67), Expect = 0.47
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -1 / +1
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N NH + R +L S * P P HSK S DQAK P T P
Sbjct: 436 NCLNHFTEFLAYRFKLFS*SM*KRPNLEP*PDPHSKSSKNDQAKNPLTSTP 588
>gb|BU884706.1|BU884706 R014D05 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 655
Score = 80.3 bits (169), Expect = 4e-015
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G +V+G+FAWS LD+FEW +G++ R+G+ Y+D NN RY K S KW ++F
Sbjct: 265 GVDVKGFFAWSFLDDFEWGSGYSSRFGLFYIDYENNLKRYAKNSVKWFEQF 417
Score = 34.1 bits (68), Expect = 0.34
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = -1 / -3
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N NH + R +L S * P + P HSK S DQAK P T P
Sbjct: 416 NCSNHFTEFLAYRFKLFS*SM*KRPNLEL*PDPHSKSSKNDQAKNPLTSTP 264
>gb|DN487906.1|DN487906 R014D05.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R014D05 3', mRNA sequence
Length = 812
Score = 80.3 bits (169), Expect = 4e-015
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G +V+G+FAWS LD+FEW +G++ R+G+ Y+D NN RY K S KW ++F
Sbjct: 741 GVDVKGFFAWSFLDDFEWGSGYSSRFGLFYIDYENNLKRYAKNSVKWFEQF 589
Score = 34.1 bits (68), Expect = 0.34
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = -1 / +2
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N NH + R +L S * P + P HSK S DQAK P T P
Sbjct: 590 NCSNHFTEFLAYRFKLFS*SM*KRPNLEL*PDPHSKSSKNDQAKNPLTSTP 742
>gb|DN497580.1|DN497580 R014D05.5pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R014D05 5', mRNA sequence
Length = 643
Score = 80.3 bits (169), Expect = 4e-015
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G +V+G+FAWS LD+FEW +G++ R+G+ Y+D NN RY K S KW ++F
Sbjct: 286 GVDVKGFFAWSFLDDFEWGSGYSSRFGLFYIDYENNLKRYAKNSVKWFEQF 438
Score = 34.1 bits (68), Expect = 0.34
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = -1 / -3
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N NH + R +L S * P + P HSK S DQAK P T P
Sbjct: 437 NCSNHFTEFLAYRFKLFS*SM*KRPNLEL*PDPHSKSSKNDQAKNPLTSTP 285
>gb|DN484727.1|DN484727 K011P14.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K011P14 3', mRNA sequence
Length = 332
Score = 78.5 bits (165), Expect = 1e-014
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2 / -3
Query: 17 QGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
+GYFAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 330 KGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFLRF 190
Score = 35.9 bits (72), Expect = 0.095
Identities = 23/46 (50%), Positives = 24/46 (52%)
Frame = -1 / +2
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*P 19
N N A+ F R L ST T P R V P HSKLSS D AK P
Sbjct: 191 NRKNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKYP 328
>gb|BU823778.1|BU823778 UB56BPD10 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 421
Score = 78.0 bits (164), Expect = 2e-014
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+G FAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 111 GVQVKGCFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFLRF 263
Score = 39.1 bits (79), Expect = 0.010
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / -1
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 262 NRKNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKHPFTCTP 110
>gb|CK097608.1|CK097608 UB56BPD10.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB56BPD10 3', mRNA sequence
Length = 459
Score = 78.0 bits (164), Expect = 2e-014
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+G FAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 347 GVQVKGCFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFLRF 195
Score = 39.1 bits (79), Expect = 0.010
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / +1
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 196 NRKNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKHPFTCTP 348
>gb|CK107403.1|CK107403 UB56BPD10.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB56BPD10 5', mRNA sequence
Length = 473
Score = 78.0 bits (164), Expect = 2e-014
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+G FAWSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 124 GVQVKGCFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFLRF 276
Score = 39.1 bits (79), Expect = 0.010
Identities = 25/51 (49%), Positives = 26/51 (50%)
Frame = -1 / -1
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
N N A+ F R L ST T P R V P HSKLSS D AK P T P
Sbjct: 275 NRKNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSNDHAKHPFTCTP 123
>gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S066G12 3', mRNA sequence
Length = 824
Score = 78.0 bits (164), Expect = 2e-014
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +2 / -3
Query: 11 NVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLK 151
+V+GYFAWSLLDN+EW +G+T R+G+ +VD NN TR K SA+W K
Sbjct: 285 DVRGYFAWSLLDNWEWNSGYTVRFGLYFVDYRNNLTRVPKASAEWFK 145
Score = 43.7 bits (89), Expect = 4e-004
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -1 / +2
Query: 147 NHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCT 13
NH A++F V+L L ST P R+V P HS+LSS+D AK*P T
Sbjct: 149 NHSAEAFGTLVRLFL*STK*SPNRTV*PEFHSQLSSKDHAK*PRT 283
Score = 37.7 bits (76), Expect = 0.027
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1 / -2
Query: 13 CARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ*LHALHEGVCQVVER 153
C+RL +V AGQL M RLHR +W L Q+ + + C++V++
Sbjct: 283 CSRLFCVVFAGQLGMELRLHRAVWTLLCGLQKQPYKGTKSFCRMVQK 143
Score = 29.5 bits (58), Expect = 8.1
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -1
Query: 33 GLCWTTLNGLPASP 74
GLCWTT NG A+P
Sbjct: 263 GLCWTTGNGTQATP 222
>gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 476
Score = 71.2 bits (149), Expect = 2e-012
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW +G+T R+GIVYVD +N
Sbjct: 226 GANLVGYFAWSLLDNFEWTSGYTSRFGIVYVDYSN 330
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -1
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 320 STYTIPNLEV*PDVHSKLSSNDQAKYPTKLAP 225
>gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_E17 3', mRNA sequence
Length = 832
Score = 70.7 bits (148), Expect = 3e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW +G+T R+GIVYVD N
Sbjct: 659 GANLAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTN 555
Score = 37.3 bits (75), Expect = 0.037
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ ST TMP V P HSKLSS D AK*P P
Sbjct: 556 LV*STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAP 660
>gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02035_N05 3', mRNA sequence
Length = 894
Score = 70.7 bits (148), Expect = 3e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW +G+T R+GIVYVD N
Sbjct: 262 GANLAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTN 158
Score = 37.3 bits (75), Expect = 0.037
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ ST TMP V P HSKLSS D AK*P P
Sbjct: 159 LV*STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAP 263
>gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 617
Score = 70.7 bits (148), Expect = 3e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW +G+T R+GIVYVD N
Sbjct: 423 GANLAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTN 527
Score = 37.3 bits (75), Expect = 0.037
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ ST TMP V P HSKLSS D AK*P P
Sbjct: 526 LV*STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAP 422
>gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_P15 3', mRNA sequence
Length = 479
Score = 70.7 bits (148), Expect = 3e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW +G+T R+GIVYVD N
Sbjct: 307 GANLAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTN 203
Score = 37.3 bits (75), Expect = 0.037
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ ST TMP V P HSKLSS D AK*P P
Sbjct: 204 LV*STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAP 308
>gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 399
Score = 69.8 bits (146), Expect = 6e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 285 GANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSN 389
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -3
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 379 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAP 284
>gb|BU810699.1|BU810699 UL74PC01 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 299
Score = 69.8 bits (146), Expect = 6e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 54 GANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSN 158
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 148 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAP 53
>gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A001P37 3', mRNA sequence
Length = 816
Score = 69.8 bits (146), Expect = 6e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 263 GANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSN 159
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / +1
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 169 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAP 264
>gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0223_P11 3', mRNA sequence
Length = 667
Score = 69.8 bits (146), Expect = 6e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 261 GANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSN 157
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / +2
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 167 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAP 262
>gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 443
Score = 69.8 bits (146), Expect = 6e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 174 GANMVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSN 278
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 268 STYTIPNLEV*PNLHSKLSSNDQAKYPTILAP 173
>gb|CX174556.1|CX174556 D10_69-87_08.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 337
Score = 69.8 bits (146), Expect = 6e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 66 GANMVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSN 170
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -1
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 160 STYTIPNLEV*PNLHSKLSSNDQAKYPTILAP 65
>gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 5', mRNA sequence
Length = 673
Score = 69.8 bits (146), Expect = 6e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 410 GANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSN 514
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 504 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAP 409
>gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 3', mRNA sequence
Length = 673
Score = 69.8 bits (146), Expect = 6e-012
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+N+ GYFAWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 264 GANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSN 160
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / +2
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 170 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAP 265
>gb|CN521503.1|CN521503 GQ0112.B3_H14 GQ011 Populus trichocarpa x Populus deltoides cDNA
clone GQ0112_H14 5', mRNA sequence
Length = 427
Score = 68.9 bits (144), Expect = 1e-011
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G V+GYFAWS DNFE+ G+T +G++YV+R +N TR K S+ W EF
Sbjct: 144 GVQVKGYFAWSFADNFEFTDGYTIGFGLLYVNRTSNFTRIKKLSSHWFTEF 296
Score = 41.4 bits (84), Expect = 0.002
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = -1 / -1
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
NS N +SF V+L +R T P V P+ +SKLS++D AK*P T P
Sbjct: 295 NSVNQCDESFFILVKLDVRFTYNKPNPMVYPSVNSKLSAKDHAK*PLT*TP 143
>gb|CV235854.1|CV235854 WS01221.B21_N19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01221_N19 3', mRNA sequence
Length = 536
Score = 65.7 bits (137), Expect(2) = 2e-011
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDR 103
G++V+GYF WSL+DNFEW G+++RYG+ YVDR
Sbjct: 416 GADVRGYFVWSLVDNFEWIDGYSQRYGLYYVDR 318
Score = 20.3 bits (38), Expect(2) = 2e-011
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2 / -1
Query: 119 RYMKESAKWLKEF 157
R K SAKW K F
Sbjct: 305 RVPKLSAKWYKNF 267
>gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_O18 5', mRNA sequence
Length = 789
Score = 68.0 bits (142), Expect = 2e-011
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKKPSKK 184
G+ V+GYFAW+ D+FEW G+T R+G+ Y D +N RY K S W F K +K+
Sbjct: 450 GTIVKGYFAWTFADDFEWPDGYTIRFGLYYTDYLHNLHRYPKRSVHWFTNFLKGSKWNKE 271
>gb|CX172845.1|CX172845 B09_69-15_03.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 629
Score = 68.0 bits (142), Expect = 2e-011
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKKPSKK 184
G+ V+GYFAW+ D+FEW G+T R+G+ Y D +N RY K S W F K +K+
Sbjct: 154 GTIVKGYFAWTFADDFEWPDGYTIRFGLYYTDYLHNLHRYPKRSVHWFTNFLKGSKWNKE 333
>gb|BU830429.1|BU830429 T008B12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 385
Score = 67.5 bits (141), Expect = 3e-011
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +2 / +3
Query: 32 WSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
WSLLDNFEW G+T+R+G+VYVD N +R+ K SA W F
Sbjct: 3 WSLLDNFEWAQGYTKRFGLVYVDYKNGLSRHPKSSAYWFLRF 128
Score = 30.4 bits (60), Expect = 4.3
Identities = 20/41 (48%), Positives = 21/41 (51%)
Frame = -1 / -1
Query: 156 NSFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRD 34
N N A+ F R L ST T P R V P HSKLSS D
Sbjct: 127 NRKNQ*AEDFGCRESPFL*STYTKPKRLV*P*AHSKLSSND 5
>gb|CK092448.1|CK092448 G084P08.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G084P08 3', mRNA sequence
Length = 207
Score = 67.5 bits (141), Expect = 3e-011
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+N+ GYFAWSLLDNFEW G+T R+GIVYVD
Sbjct: 124 GANLVGYFAWSLLDNFEWRLGYTSRFGIVYVD 29
Score = 34.5 bits (69), Expect = 0.25
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / +3
Query: 99 ST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
ST T+P V P HSKLSS DQAK P P
Sbjct: 30 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAP 125
>gb|DN492359.1|DN492359 X010D05.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X010D05 3', mRNA sequence
Length = 450
Score = 67.5 bits (141), Expect = 3e-011
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2 / -3
Query: 14 VQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKE 154
V+GYFAW+ D+FE+ G+T +G+V++DR +N TR MK SA W E
Sbjct: 319 VKGYFAWTFTDDFEFTDGYTVGFGLVHMDRTDNLTRQMKRSATWFSE 179
Score = 41.4 bits (84), Expect = 0.002
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = -1 / +3
Query: 153 SFNHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCT 13
S NH+A+ F+ RV+L +RS T P +V P+ +SK S + AK*P T
Sbjct: 180 SENHVAERFICRVKLSVRSMCTKPNPTVYPSVNSKSSVKVHAK*PLT 320
>gb|BU897636.1|BU897636 X060G07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 496
Score = 66.6 bits (139), Expect = 5e-011
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2 / +2
Query: 14 VQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKE 154
V+GYFAWS D+FE+ G+T +G+V+++R +N TR MK SA W E
Sbjct: 233 VKGYFAWSFTDDFEFTDGYTVGFGLVHINRKSNLTRQMKLSASWFSE 373
>gb|BU895722.1|BU895722 X030A11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 300
Score = 66.1 bits (138), Expect = 7e-011
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +2 / +2
Query: 14 VQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKE 154
V+GYFAW+ D+FE+ G+T +G+V+++R +N TR MK SA W E
Sbjct: 50 VKGYFAWTFTDDFEFTDGYTVGFGLVHINRTDNLTRQMKRSATWFSE 190
>gb|BU897666.1|BU897666 X062F01 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 515
Score = 66.1 bits (138), Expect = 7e-011
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +2 / +1
Query: 14 VQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKE 154
V+GYFAW+ D+FE+ G+T +G+V+++R +N TR MK SA W E
Sbjct: 100 VKGYFAWTFTDDFEFTDGYTVGFGLVHINRTDNLTRQMKRSATWFSE 240
>gb|CX173794.1|CX173794 G02_69-78_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 661
Score = 65.7 bits (137), Expect = 1e-010
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G+ V+GYFAW+ D+FEW G+T R+G+ Y D N RY K S W F
Sbjct: 453 GTIVKGYFAWTFADDFEWPNGYTIRFGLYYTDYLRNLHRYPKRSVHWFTNF 301
>gb|CX174182.1|CX174182 C09_69-41_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 681
Score = 65.7 bits (137), Expect = 1e-010
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEF 157
G+ V+GYFAW+ D+FEW G+T R+G+ Y D N RY K S W F
Sbjct: 472 GTIVKGYFAWTFADDFEWPNGYTIRFGLYYTDYLRNLHRYPKRSVHWFTNF 320
>gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_E15 5', mRNA sequence
Length = 727
Score = 62.5 bits (130), Expect = 1e-009
Identities = 21/32 (65%), Positives = 29/32 (90%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G++V+GYFAWSLLDNFEW +G+T R+G+ +VD
Sbjct: 471 GADVRGYFAWSLLDNFEWTSGYTIRFGLYHVD 376
Score = 29.5 bits (58), Expect = 8.1
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = -1 / +2
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST P V P HSKLSS D AK P T P
Sbjct: 374 KSTW*SPNLMVYPDVHSKLSSNDHAKYPRTSAP 472
>gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041F03 3', mRNA sequence
Length = 842
Score = 60.6 bits (126), Expect = 3e-009
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G++V+GYFAWS LDNFEW G+T R+G+ +VD
Sbjct: 269 GADVRGYFAWSFLDNFEWTFGYTRRFGLYHVD 174
Score = 31.8 bits (63), Expect = 1.7
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P HSKLS +DQAK*P T P
Sbjct: 208 PNVHSKLSRKDQAK*PLTSAP 270
>gb|DN494199.1|DN494199 K011P14.5pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K011P14 5', mRNA
sequence
Length = 82
Score = 59.7 bits (124), Expect = 6e-009
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +2 / +2
Query: 17 QGYFAWSLLDNFEWFAGFTERYGIVYV 97
+GYFAWSLLDNFEW G+T+R+G+VYV
Sbjct: 2 KGYFAWSLLDNFEWAQGYTKRFGLVYV 82
Score = 29.9 bits (59), Expect = 5.9
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -1 / -2
Query: 96 T*TMP*RSVKPANHSKLSSRDQAK*P 19
T T P R V P HSKLSS D AK P
Sbjct: 81 TYTKPKRLV*P*AHSKLSSNDHAKYP 4
>gb|BU866366.1|BU866366 S066A01 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 226
Score = 55.6 bits (115), Expect = 1e-007
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2 / +2
Query: 29 AWSLLDNFEWFAGFTERYGIVYVDRNN 109
AWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 2 AWSLLDNFEWRLGYTSRFGIVYVDYSN 82
Score = 29.5 bits (58), Expect = 8.1
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -1 / -2
Query: 99 ST*TMP*RSVKPANHSKLSSRDQA 28
ST T+P V P HSKLSS DQA
Sbjct: 72 STYTIPNLEV*PNLHSKLSSNDQA 1
>gb|BU866847.1|BU866847 S071D12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 225
Score = 55.6 bits (115), Expect = 1e-007
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2 / +2
Query: 29 AWSLLDNFEWFAGFTERYGIVYVDRNN 109
AWSLLDNFEW G+T R+GIVYVD +N
Sbjct: 2 AWSLLDNFEWRLGYTSRFGIVYVDYSN 82
Score = 29.5 bits (58), Expect = 8.1
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -1 / -1
Query: 99 ST*TMP*RSVKPANHSKLSSRDQA 28
ST T+P V P HSKLSS DQA
Sbjct: 72 STYTIPNLEV*PNLHSKLSSNDQA 1
>gb|BI123670.1|BI123670 I026P86P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 575
Score = 52.8 bits (109), Expect = 7e-007
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2 / +1
Query: 2 LGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKES 136
+G V GY W++ DN+EW G+ ++G+V VDR NN +R + S
Sbjct: 421 MGVPVLGYLFWTISDNWEWADGYGPKFGLVTVDRENNLSRIPRPS 555
>gb|BI125497.1|BI125497 I062P10P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 556
Score = 52.8 bits (109), Expect = 7e-007
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2 / +3
Query: 2 LGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKES 136
+G V GY W++ DN+EW G+ ++G+V VDR NN +R + S
Sbjct: 39 MGVPVLGYLFWTISDNWEWADGYGPKFGLVTVDRENNLSRIPRPS 173
>gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 634
Score = 52.8 bits (109), Expect = 7e-007
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTR 121
G+ V+GYFAW+ D+FEW G+T R+G+ Y D +N R
Sbjct: 518 GTIVKGYFAWTFADDFEWPDGYTIRFGLYYTDYLHNLHR 634
>gb|DN487045.1|DN487045 Q001H08.3pR Populus dormant bud cDNA library Populus tremula cDNA
clone Q001H08 3', mRNA sequence
Length = 723
Score = 52.8 bits (109), Expect = 7e-007
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2 / -2
Query: 2 LGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKES 136
+G V GY W++ DN+EW G+ ++G+V VDR NN +R + S
Sbjct: 647 MGVPVLGYLFWTISDNWEWADGYGPKFGLVTVDRENNLSRIPRPS 513
>gb|CK094390.1|CK094390 I026P86.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I026P86 3', mRNA sequence
Length = 590
Score = 51.9 bits (107), Expect = 1e-006
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKES 136
G V GY W++ DN+EW G+ ++G+V VDR NN +R + S
Sbjct: 582 GVPVLGYLFWTISDNWEWADGYGPKFGLVTVDRENNLSRIPRPS 451
>gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 643
Score = 45.1 bits (92), Expect = 2e-004
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEW 58
G+N+ GYFAWSLLDNFEW
Sbjct: 590 GANMVGYFAWSLLDNFEW 643
>gb|DN498729.1|DN498729 S066G12.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S066G12 5', mRNA sequence
Length = 774
Score = 41.8 bits (85), Expect = 0.002
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +2 / +3
Query: 11 NVQGYFAWSLLDNFEWFAG 67
+V+GYFAWSLLDN+EW +G
Sbjct: 717 DVRGYFAWSLLDNWEWNSG 773
>gb|BI130255.1|BI130255 G102P91Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 485
Score = 40.9 bits (83), Expect = 0.003
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEW 58
G++V+GYFAWS LDN EW
Sbjct: 424 GADVRGYFAWSFLDNLEW 477
Score = 30.4 bits (60), Expect = 4.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1 / -1
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P HS+LS +DQAK*P T P
Sbjct: 485 PNVHSRLSRKDQAK*PLTSAP 423
>gb|CK102593.1|CK102593 G084P08.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G084P08 5', mRNA sequence
Length = 416
Score = 40.9 bits (83), Expect = 0.003
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 20 GYFAWSLLDNFEWFAGFTERY 82
G F WSLLDNFEW G+T R+
Sbjct: 301 GTFDWSLLDNFEWRLGYTSRF 363
>gb|BU866443.1|BU866443 S066G12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 745
Score = 40.0 bits (81), Expect = 0.005
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2 / +3
Query: 11 NVQGYFAWSLLDNFEW 58
+V+GYFAWSLLDN+EW
Sbjct: 696 DVRGYFAWSLLDNWEW 743
>gb|CV278014.1|CV278014 WS0145.B21_D07 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0145_D07 3', mRNA sequence
Length = 497
Score = 39.6 bits (80), Expect = 0.007
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2 / -1
Query: 77 RYGIVYVDRNNNCTRYMKESAKWLKEF 157
R+G+ +VD N+ RY K+S KW K+F
Sbjct: 491 RFGLYHVDYKNDLKRYPKQSVKWFKQF 411
>gb|AJ772217.1|AJ772217 AJ772217 Populus euphratica shoot in vitro plantlet Israel
Populus euphratica cDNA clone P0001700003A09F1, mRNA
sequence
Length = 98
Score = 35.9 bits (72), Expect = 0.095
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 14 VQGYFAWSLLDNFEWFAGFTERYGI 88
V+GY WS DNFE+ G+T +G+
Sbjct: 75 VKGYLVWSFADNFEFTDGYTIGFGL 1
>gb|CX657346.1|CX657346 PO02042F10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02042F10 5', mRNA sequence
Length = 646
Score = 33.6 bits (67), Expect = 0.47
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFA 64
G NV+ Y+ WS LD+ EW A
Sbjct: 586 GGNVKAYYIWSFLDDSEWDA 645
>gb|CV244460.1|CV244460 WS0254.B21_L17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0254_L17 3', mRNA sequence
Length = 766
Score = 33.1 bits (66), Expect = 0.64
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2 / +3
Query: 164 RC*TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSC 45
RC + + + SCS+C CC R C + S + +SC
Sbjct: 192 RCCSSGSCGSSGSCSSCRSCCSSCRSCCSTSGSCSSCRSC 311
>gb|CA822031.1|CA822031 R02H05 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 598
Score = 31.3 bits (62), Expect = 2.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2 / +1
Query: 239 FMGCTXIMRPPIFKLA*ESSCWAFS 165
+M C I P F L *++SCW +S
Sbjct: 268 YMSCMMIFISPFFMLR*QASCWLWS 342
>gb|CX176223.1|CX176223 G01_69-22_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 735
Score = 31.3 bits (62), Expect = 2.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2 / +1
Query: 239 FMGCTXIMRPPIFKLA*ESSCWAFS 165
+M C I P F L *++SCW +S
Sbjct: 475 YMSCMMIFISPFFMLR*QASCWLWS 549
>gb|CV237297.1|CV237297 WS01227.B21.1_E17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01227_E17 3', mRNA sequence
Length = 872
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / -1
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 785 CQECNFCCHRRRNC 744
>gb|CV242330.1|CV242330 WS02514.B21.1_M09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_M09 3', mRNA sequence
Length = 934
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / -1
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 733 CQECNFCCHRRRNC 692
>gb|CV244677.1|CV244677 WS0255.B21_E24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0255_E24 3', mRNA sequence
Length = 765
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / -3
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 682 CQECNFCCHRRRNC 641
>gb|CV256208.1|CV256208 WS0243.B21_D16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_D16 3', mRNA sequence
Length = 910
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / -1
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 736 CQECNFCCHRRRNC 695
>gb|DT472689.1|DT472689 WS01227.BR.1_E17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01227_E17 5', mRNA sequence
Length = 821
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / +1
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 238 CQECNFCCHRRRNC 279
>gb|DT523223.1|DT523223 WS02039.B21_C04 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02039_C04 3', mRNA sequence
Length = 890
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / -1
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 656 CQECNFCCHRRRNC 615
>gb|BI135884.1|BI135884 F059P74Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 544
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / +3
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 453 CQECNFCCHRRRNC 494
>gb|CA927289.1|CA927289 MTU6CR.P7.B12 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 600
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / -2
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 533 CQECNFCCHRRRNC 492
>gb|CX174383.1|CX174383 B12_69-46_04.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 676
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / +2
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 335 CQECNFCCHRRRNC 376
>gb|CX176986.1|CX176986 F10_69-101_12.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 615
Score = 30.9 bits (61), Expect = 3.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / +2
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 317 CQECNFCCHRRRNC 358
>gb|CA822369.1|CA822369 R07C10 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 332
Score = 30.4 bits (60), Expect = 4.3
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 46 QL*MVCRLHRTLWHCLR 96
+L*+V L+RTLWHC R
Sbjct: 246 RL*LVYMLNRTLWHCCR 296
>gb|CV231806.1|CV231806 WS0195.B21_J23 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0195_J23 3', mRNA sequence
Length = 706
Score = 30.4 bits (60), Expect = 4.3
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 46 QL*MVCRLHRTLWHCLR 96
+L*+V L+RTLWHC R
Sbjct: 529 RL*LVYMLNRTLWHCCR 579
>gb|CV244389.1|CV244389 WS0254.B21_I09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0254_I09 3', mRNA sequence
Length = 860
Score = 30.4 bits (60), Expect = 4.3
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -3
Query: 46 QL*MVCRLHRTLWHCLR 96
+L*+V L+RTLWHC R
Sbjct: 207 RL*LVYMLNRTLWHCCR 157
>gb|BU879983.1|BU879983 UM39TH12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 618
Score = 29.9 bits (59), Expect = 5.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2 / -3
Query: 116 TRYMKESAKWLKEFNTAKKPSKKIL 190
T +KE WLK+ N +KP +KIL
Sbjct: 91 TGSIKEMRHWLKKINLIEKPYEKIL 17
>gb|BU883643.1|BU883643 UM95TD06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 583
Score = 29.9 bits (59), Expect = 5.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEFNTAKKPSKKIL 190
T +KE WLK+ N +KP +KIL
Sbjct: 435 TGSIKEMRHWLKKINLIEKPYEKIL 361
>gb|BU893582.1|BU893582 P079F09 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 657
Score = 29.9 bits (59), Expect = 5.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / -2
Query: 149 STTWQTPSCSACSYCCGRRR 90
ST Q P+C+ C YC RR+
Sbjct: 527 STKKQLPTCNRCLYCSSRRQ 468
>gb|CK105271.1|CK105271 I079P81.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I079P81 5', mRNA sequence
Length = 612
Score = 29.9 bits (59), Expect = 5.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / -2
Query: 149 STTWQTPSCSACSYCCGRRR 90
ST Q P+C+ C YC RR+
Sbjct: 515 STKKQLPTCNRCLYCSSRRQ 456
>gb|DT495664.1|DT495664 WS01121.BR_C05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01121_C05 5', mRNA sequence
Length = 846
Score = 29.9 bits (59), Expect = 5.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 110 YCCGRRRQCHNVR 72
YCC +RRQCH R
Sbjct: 280 YCCHQRRQCHPAR 318
>gb|DT499994.1|DT499994 WS9991.BR_O19 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0119_K05
5', mRNA sequence
Length = 367
Score = 29.9 bits (59), Expect = 5.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 110 YCCGRRRQCHNVR 72
YCC +RRQCH R
Sbjct: 285 YCCHQRRQCHPAR 323
>gb|BU829307.1|BU829307 K038P16P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 497
Score = 29.5 bits (58), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1 / +1
Query: 231 LHXXHEAPDF*AGVRIFLLGFFAVLNS 151
LH H +P F R+FLL F L S
Sbjct: 328 LHSFHSSPSFFFSSRVFLLSLFFFLRS 408
>gb|BU875277.1|BU875277 V004CE09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 682
Score = 29.5 bits (58), Expect = 8.1
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 110 YCCGRRRQCHNV 75
YCC +RRQCH V
Sbjct: 317 YCCHQRRQCHPV 352
>gb|BU891716.1|BU891716 P054C08 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 641
Score = 29.5 bits (58), Expect = 8.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / +2
Query: 125 CSACSYCCGRRRQC 84
C C++CC RRR C
Sbjct: 41 CQ*CNFCCHRRRNC 82
>gb|CA934538.1|CA934538 MTU3TS.P9.B03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 380
Score = 29.5 bits (58), Expect = 8.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1 / +2
Query: 216 EAPDF*AGVRIFLLGFFAVLNSFNHLADSF 127
++ DF R F LGF + + HL+D+F
Sbjct: 8 QSQDFIMYYRFFFLGFIRIFHQKKHLSDTF 97
>gb|CK113935.1|CK113935 V004E09 Populus male catkins cDNA library Populus trichocarpa cDNA
clone V004E09 5', mRNA sequence
Length = 864
Score = 29.5 bits (58), Expect = 8.1
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 110 YCCGRRRQCHNV 75
YCC +RRQCH V
Sbjct: 337 YCCHQRRQCHPV 372
Database: Populus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:31 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 139,978,834
Number of Sequences: 369679
Number of extensions: 1576970
Number of successful extensions: 112208
Number of sequences better than 10.0: 102
length of database: 67,802,888
effective HSP length: 49
effective length of database: 49,688,617
effective search space used: 3031005637
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)