TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804944.2.3
(671 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 159 2e-038
gb|CN522300.1|CN522300 GQ0121.B3_M07 GQ012 Populus trichoca... 149 2e-035
gb|BI128229.1|BI128229 G072P90Y Populus cambium cDNA librar... 144 4e-034
gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid lib... 144 4e-034
gb|BU894361.1|BU894361 X008A10 Populus wood cDNA library Po... 143 1e-033
gb|BU894931.1|BU894931 X017A07 Populus wood cDNA library Po... 143 1e-033
gb|CK093129.1|CK093129 G109P08.3pR Populus tension wood cDN... 143 1e-033
gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus tricho... 143 1e-033
gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal libra... 143 1e-033
gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus tri... 143 1e-033
gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus tri... 143 1e-033
gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus tri... 143 1e-033
gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus tri... 143 1e-033
gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus tri... 143 1e-033
gb|CV272431.1|CV272431 WS0157.B21_K08 PTxN-IB-A-6 Populus t... 143 1e-033
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 143 1e-033
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 143 1e-033
gb|CF232524.1|CF232524 PtaJXO0011E3E0309 Poplar cDNA librar... 143 1e-033
gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA librar... 143 1e-033
gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA librar... 143 1e-033
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 141 4e-033
gb|CV240870.1|CV240870 WS02510.B21_J08 PT-MB-N-A-15 Populus... 140 7e-033
gb|BU894855.1|BU894855 X016A07 Populus wood cDNA library Po... 139 2e-032
gb|CV232087.1|CV232087 WS0196.B21_I06 PT-DX-N-A-10 Populus ... 139 2e-032
gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Librar... 138 3e-032
gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA librar... 138 3e-032
gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-... 138 3e-032
gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus t... 138 3e-032
gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus tr... 138 3e-032
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 138 3e-032
gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA librar... 138 5e-032
gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Po... 138 5e-032
gb|CF227669.1|CF227669 PtaXM0003A12A1202 Poplar cDNA librar... 138 5e-032
gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA libra... 138 5e-032
gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDN... 138 5e-032
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 138 5e-032
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 138 5e-032
gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus... 138 5e-032
gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus... 138 5e-032
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 138 5e-032
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 137 6e-032
gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library fro... 137 9e-032
gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichoca... 137 9e-032
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 137 9e-032
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 136 1e-031
gb|BU895092.1|BU895092 X019B09 Populus wood cDNA library Po... 135 3e-031
gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Po... 134 4e-031
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 133 8e-031
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 124 8e-029
gb|DT469902.1|DT469902 WS01919.C21_E06 PT-DX-N-A-10 Populus... 125 3e-028
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 123 1e-027
gb|DT526486.1|DT526486 WS02048.C21_C18 PTxN-IB-N-A-11 Popul... 119 2e-026
gb|BU894292.1|BU894292 X005H01 Populus wood cDNA library Po... 118 4e-026
gb|BU897587.1|BU897587 X060B01 Populus wood cDNA library Po... 118 4e-026
gb|BU897715.1|BU897715 X067B10 Populus wood cDNA library Po... 118 4e-026
gb|CF227527.1|CF227527 PtaXM0001A6A0602 Poplar cDNA library... 118 4e-026
gb|CF228386.1|CF228386 PtaXM0012D12D1208 Poplar cDNA librar... 118 4e-026
gb|CF228459.1|CF228459 PtaXM0013C2C0206 Poplar cDNA library... 118 4e-026
gb|CF228576.1|CF228576 PtaXM0014G2G0214 Poplar cDNA library... 118 4e-026
gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA librar... 118 4e-026
gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA librar... 118 4e-026
gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA librar... 118 4e-026
gb|CF236510.1|CF236510 PtaJXT3F6F0612 Poplar cDNA library f... 118 4e-026
gb|CF236645.1|CF236645 PtaJXT5D1D0107 Poplar cDNA library f... 118 4e-026
gb|CF236856.1|CF236856 PtaJXT8A6A0602 Poplar cDNA library f... 118 4e-026
gb|CK092841.1|CK092841 G097P01.3pR Populus tension wood cDN... 118 4e-026
gb|CK318662.1|CK318662 X9P01h06 Populus stem seasonal libra... 118 4e-026
gb|CV231507.1|CV231507 WS0194.B21_M01 PT-DX-N-A-10 Populus ... 118 4e-026
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 118 4e-026
gb|DT469819.1|DT469819 WS01918.C21_P21 PT-DX-N-A-10 Populus... 117 7e-026
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 105 8e-026
gb|CN520055.1|CN520055 GQ0105.B3_H23 GQ010 Populus trichoca... 106 8e-026
gb|CK088138.1|CK088138 A040P09.3pR Hybrid aspen plasmid lib... 116 1e-025
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 116 1e-025
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 105 1e-025
gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDN... 116 2e-025
gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium... 116 2e-025
gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDN... 116 2e-025
gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal libr... 116 2e-025
gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus... 116 2e-025
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 116 2e-025
gb|CV252662.1|CV252662 PX0015.B21_I21 PT-X-FL-A-1 Populus t... 116 2e-025
gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populu... 116 2e-025
gb|CV268371.1|CV268371 WS0205.B21_E18 PTxN-IB-N-A-11 Populu... 116 2e-025
gb|CV273968.1|CV273968 WS01712.B21_M13 PTxD-NR-A-8 Populus ... 116 2e-025
gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus... 116 2e-025
gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA librar... 116 2e-025
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 116 2e-025
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 116 2e-025
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 116 2e-025
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 116 2e-025
gb|CF235953.1|CF235953 PtaJXT0028H7H0715 Poplar cDNA librar... 102 3e-025
gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library... 115 4e-025
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 115 4e-025
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 115 4e-025
gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cD... 114 5e-025
gb|CF228296.1|CF228296 PtaXM0011D10D1008 Poplar cDNA librar... 102 5e-025
gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichoca... 114 7e-025
gb|DN485869.1|DN485869 N041C05.3pR Populus bark cDNA librar... 92 7e-025
gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus tri... 113 9e-025
gb|DT523570.1|DT523570 WS02040.B21_A19 PTxN-IB-N-A-11 Popul... 113 1e-024
gb|CV235270.1|CV235270 WS01218.B21_H07 PT-GT-FL-A-3 Populus... 106 1e-024
gb|CV238245.1|CV238245 WS0125.B21_N16 PT-GT-FL-A-3 Populus ... 106 1e-024
gb|CV234217.1|CV234217 WS01214.B21_B13 PT-GT-FL-A-3 Populus... 106 1e-024
gb|CV238311.1|CV238311 WS0126.B21_C03 PT-GT-FL-A-3 Populus ... 106 1e-024
gb|DT507297.1|DT507297 WS02417.BR_O04 PTxD-ICC-N-A-14 Popul... 106 1e-024
gb|BP931353.1|BP931353 BP931353 full-length enriched poplar... 101 2e-024
gb|BP935110.1|BP935110 BP935110 full-length enriched poplar... 101 2e-024
gb|CK092951.1|CK092951 G101P46.3pR Populus tension wood cDN... 110 9e-024
gb|CK102299.1|CK102299 G072P58.5pR Populus tension wood cDN... 110 9e-024
gb|BI138973.1|BI138973 F120P33Y Populus flower cDNA library... 109 2e-023
gb|CK091716.1|CK091716 F120P33.3pR Populus flower cDNA libr... 109 2e-023
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 107 6e-023
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 107 6e-023
gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus tricho... 107 8e-023
gb|CV231647.1|CV231647 WS0195.B21_C14 PT-DX-N-A-10 Populus ... 104 5e-022
gb|CK111062.1|CK111062 Q008E05 Populus dormant bud cDNA lib... 101 4e-021
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 159 bits (342), Expect = 2e-038
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTI+IVWSILLASIFSLLWVRIDPFLAK +GPLLEE
Sbjct: 3128 FFAFWVIVHLYPFLKGLLGRQNRTPTIIIVWSILLASIFSLLWVRIDPFLAKSNGPLLEE 3307
Query: 187 CGLDCN* 207
CGLDCN*
Sbjct: 3308 CGLDCN* 3328
>gb|CN522300.1|CN522300 GQ0121.B3_M07 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0121_M07 5', mRNA sequence
Length = 391
Score = 149 bits (320), Expect = 2e-035
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +1 / +2
Query: 19 WVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLD 198
WVIVHLYPFLKGL+GRQNRTPTI+IVWSILLASIFSLLWVRIDPFLAK +GPLLEECGLD
Sbjct: 2 WVIVHLYPFLKGLLGRQNRTPTIIIVWSILLASIFSLLWVRIDPFLAKSNGPLLEECGLD 181
Query: 199 CN* 207
CN*
Sbjct: 182 CN* 190
>gb|BI128229.1|BI128229 G072P90Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 440
Score = 144 bits (310), Expect = 4e-034
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSL+WVRIDPFL K GP+L++
Sbjct: 37 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLIWVRIDPFLPKQTGPILKQ 216
Query: 187 CGLDC 201
CG+DC
Sbjct: 217 CGVDC 231
>gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A064P24 3', mRNA sequence
Length = 673
Score = 144 bits (310), Expect = 4e-034
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSL+WVRIDPFL K GP+L++
Sbjct: 424 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLIWVRIDPFLPKQTGPILKQ 245
Query: 187 CGLDC 201
CG+DC
Sbjct: 244 CGVDC 230
>gb|BU894361.1|BU894361 X008A10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 525
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 116 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 295
Query: 187 CGLDC 201
CG++C
Sbjct: 296 CGVEC 310
>gb|BU894931.1|BU894931 X017A07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 550
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 153 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 332
Query: 187 CGLDC 201
CG++C
Sbjct: 333 CGVEC 347
>gb|CK093129.1|CK093129 G109P08.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G109P08 3', mRNA sequence
Length = 783
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / -3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 427 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 248
Query: 187 CGLDC 201
CG++C
Sbjct: 247 CGVEC 233
>gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_H06 5', mRNA sequence
Length = 758
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 454 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 633
Query: 187 CGLDC 201
CG++C
Sbjct: 634 CGVEC 648
>gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 673
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 267 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 446
Query: 187 CGLDC 201
CG++C
Sbjct: 447 CGVEC 461
>gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus trichocarpa cDNA clone WS0161_G07
3', mRNA sequence
Length = 764
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / -3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 423 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 244
Query: 187 CGLDC 201
CG++C
Sbjct: 243 CGVEC 229
>gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_K19
3', mRNA sequence
Length = 883
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 423 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 244
Query: 187 CGLDC 201
CG++C
Sbjct: 243 CGVEC 229
>gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_A20
3', mRNA sequence
Length = 807
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 425 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 246
Query: 187 CGLDC 201
CG++C
Sbjct: 245 CGVEC 231
>gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_J02
3', mRNA sequence
Length = 806
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / -3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 423 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 244
Query: 187 CGLDC 201
CG++C
Sbjct: 243 CGVEC 229
>gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_M03
3', mRNA sequence
Length = 823
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 411 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 232
Query: 187 CGLDC 201
CG++C
Sbjct: 231 CGVEC 217
>gb|CV272431.1|CV272431 WS0157.B21_K08 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0157_K08 3', mRNA sequence
Length = 689
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 424 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 245
Query: 187 CGLDC 201
CG++C
Sbjct: 244 CGVEC 230
>gb|AF527387.1| Populus tremuloides xylem-specific cellulose synthase (CesA3) mRNA,
complete cds
Length = 3401
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 2970 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 3149
Query: 187 CGLDC 201
CG++C
Sbjct: 3150 CGVEC 3164
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1)
mRNA, complete cds
Length = 3472
Score = 143 bits (307), Expect = 1e-033
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 3042 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 3221
Query: 187 CGLDC 201
CG++C
Sbjct: 3222 CGVEC 3236
>gb|CF232524.1|CF232524 PtaJXO0011E3E0309 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 620
Score = 143 bits (306), Expect = 1e-033
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSL+WVRIDPFL K GP+L++
Sbjct: 69 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLIWVRIDPFLPKQTGPILKQ 248
Query: 187 CGLDC 201
CG++C
Sbjct: 249 CGVEC 263
>gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 656
Score = 143 bits (306), Expect = 1e-033
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSL+WVRIDPFL K GP+L++
Sbjct: 412 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLIWVRIDPFLPKQTGPILKQ 591
Query: 187 CGLDC 201
CG++C
Sbjct: 592 CGVEC 606
>gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 744
Score = 143 bits (306), Expect = 1e-033
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSL+WVRIDPFL K GP+L++
Sbjct: 345 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLIWVRIDPFLPKQTGPILKQ 524
Query: 187 CGLDC 201
CG++C
Sbjct: 525 CGVEC 539
>gb|AF081534.1|AF081534 Populus x canescens cellulose synthase (cel1) mRNA, complete cds
Length = 3395
Score = 141 bits (303), Expect = 4e-033
Identities = 51/65 (78%), Positives = 62/65 (95%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+G+QNRTPTIV++WS+LLASIFSL+WVRIDPFL K GP+L++
Sbjct: 2958 FFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSVLLASIFSLIWVRIDPFLPKQTGPILKQ 3137
Query: 187 CGLDC 201
CG++C
Sbjct: 3138 CGVEC 3152
>gb|CV240870.1|CV240870 WS02510.B21_J08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02510_J08 3', mRNA sequence
Length = 697
Score = 140 bits (301), Expect = 7e-033
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1 / -2
Query: 28 VHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDCN* 207
VHLYPFLKGL+GRQNRTPTI+IVWSILLASIFSLLWVRIDPFLAK +GPLLEECGLDCN*
Sbjct: 696 VHLYPFLKGLLGRQNRTPTIIIVWSILLASIFSLLWVRIDPFLAKSNGPLLEECGLDCN* 517
>gb|BU894855.1|BU894855 X016A07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 505
Score = 139 bits (298), Expect = 2e-032
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQN TPTIV +WS+LLASIFSL+WVRIDPFL K GP+L++
Sbjct: 280 FFAFWVIVHLYPFLKGLMGRQNMTPTIVDLWSVLLASIFSLIWVRIDPFLPKQTGPILKQ 459
Query: 187 CGLDC 201
CG+DC
Sbjct: 460 CGVDC 474
>gb|CV232087.1|CV232087 WS0196.B21_I06 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0196_I06 3', mRNA sequence
Length = 646
Score = 139 bits (298), Expect = 2e-032
Identities = 52/65 (80%), Positives = 61/65 (93%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLK L+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 442 FFAFWVIVHLYPFLKCLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 263
Query: 187 CGLDC 201
CG++C
Sbjct: 262 CGVEC 248
>gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 482
Score = 138 bits (296), Expect = 3e-032
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+
Sbjct: 274 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQ 95
Query: 187 CGLDC 201
CG++C
Sbjct: 94 CGINC 80
>gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 486
Score = 138 bits (296), Expect = 3e-032
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 76 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTRGPDTKQ 255
Query: 187 CGLDC 201
CGL+C
Sbjct: 256 CGLNC 270
>gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300030F05F1, mRNA sequence
Length = 385
Score = 138 bits (296), Expect = 3e-032
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 164 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTRGPDTKQ 343
Query: 187 CGLDC 201
CGL+C
Sbjct: 344 CGLNC 358
>gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_G15 3', mRNA sequence
Length = 445
Score = 138 bits (296), Expect = 3e-032
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 358 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTRGPDTKQ 179
Query: 187 CGLDC 201
CGL+C
Sbjct: 178 CGLNC 164
>gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_M17
5', mRNA sequence
Length = 514
Score = 138 bits (296), Expect = 3e-032
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+
Sbjct: 50 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQ 229
Query: 187 CGLDC 201
CG++C
Sbjct: 230 CGINC 244
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 138 bits (296), Expect = 3e-032
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 2922 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTRGPDTKQ 3101
Query: 187 CGLDC 201
CGL+C
Sbjct: 3102 CGLNC 3116
>gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 490
Score = 138 bits (295), Expect = 5e-032
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 152 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQ 331
Query: 187 CGLDC 201
CG++C
Sbjct: 332 CGINC 346
>gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 367
Score = 138 bits (295), Expect = 5e-032
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 42 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQ 221
Query: 187 CGLDC 201
CG++C
Sbjct: 222 CGINC 236
>gb|CF227669.1|CF227669 PtaXM0003A12A1202 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 340
Score = 138 bits (295), Expect = 5e-032
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 1 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQ 180
Query: 187 CGLDC 201
CG++C
Sbjct: 181 CGINC 195
>gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 441
Score = 138 bits (295), Expect = 5e-032
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 81 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQ 260
Query: 187 CGLDC 201
CG++C
Sbjct: 261 CGINC 275
>gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G072P74 5', mRNA sequence
Length = 389
Score = 138 bits (295), Expect = 5e-032
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 152 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQ 331
Query: 187 CGLDC 201
CG++C
Sbjct: 332 CGINC 346
>gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_I15 5', mRNA sequence
Length = 777
Score = 138 bits (295), Expect = 5e-032
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 445 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQ 624
Query: 187 CGLDC 201
CG++C
Sbjct: 625 CGINC 639
>gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000500004B05F1, mRNA sequence
Length = 634
Score = 138 bits (295), Expect = 5e-032
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 284 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQ 463
Query: 187 CGLDC 201
CG++C
Sbjct: 464 CGINC 478
>gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_F15 3', mRNA sequence
Length = 450
Score = 138 bits (295), Expect = 5e-032
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+
Sbjct: 258 FFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQ 79
Query: 187 CGLDC 201
CG++C
Sbjct: 78 CGINC 64
>gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_H07 3', mRNA sequence
Length = 439
Score = 138 bits (295), Expect = 5e-032
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+
Sbjct: 258 FFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQ 79
Query: 187 CGLDC 201
CG++C
Sbjct: 78 CGINC 64
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 138 bits (295), Expect = 5e-032
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP +E+
Sbjct: 3275 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTIRVTGPDVEQ 3454
Query: 187 CGLDC 201
CG++C
Sbjct: 3455 CGINC 3469
>gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 769
Score = 137 bits (294), Expect = 6e-032
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTIV+VWS+LLASIFSLLWVR+DPF K GP L +
Sbjct: 567 FFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRVDPFTTKVTGPDLTQ 746
Query: 187 CGLDC 201
CG++C
Sbjct: 747 CGINC 761
>gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library from wood tissues Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 137 bits (293), Expect = 9e-032
Identities = 49/65 (75%), Positives = 60/65 (92%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTI++VWS+LLASIFSLLWVR+DPF + GP +E+
Sbjct: 163 FFAFWVIIHLYPFLKGLMGRQNRTPTIIVVWSVLLASIFSLLWVRVDPFTTRVTGPDVEQ 342
Query: 187 CGLDC 201
CG++C
Sbjct: 343 CGINC 357
>gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_I06 5', mRNA sequence
Length = 780
Score = 137 bits (293), Expect = 9e-032
Identities = 49/65 (75%), Positives = 60/65 (92%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTI++VWS+LLASIFSLLWVR+DPF + GP +E+
Sbjct: 299 FFAFWVIIHLYPFLKGLMGRQNRTPTIIVVWSVLLASIFSLLWVRVDPFTTRVTGPDVEQ 478
Query: 187 CGLDC 201
CG++C
Sbjct: 479 CGINC 493
>gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 3', mRNA sequence
Length = 853
Score = 137 bits (293), Expect = 9e-032
Identities = 49/65 (75%), Positives = 60/65 (92%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTI++VWS+LLASIFSLLWVR+DPF + GP +E+
Sbjct: 520 FFAFWVIIHLYPFLKGLMGRQNRTPTIIVVWSVLLASIFSLLWVRVDPFTTRVTGPDVEQ 341
Query: 187 CGLDC 201
CG++C
Sbjct: 340 CGINC 326
>gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300033F04F1, mRNA sequence
Length = 589
Score = 136 bits (292), Expect = 1e-031
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++W +LLASIFSLLWVRIDPF+ K GP ++
Sbjct: 288 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWXVLLASIFSLLWVRIDPFVMKTRGPDTKQ 467
Query: 187 CGLDC 201
CGL+C
Sbjct: 468 CGLNC 482
>gb|BU895092.1|BU895092 X019B09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 626
Score = 135 bits (289), Expect = 3e-031
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAF IVHLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 226 FFAFCFIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 405
Query: 187 CGLDC 201
CG++C
Sbjct: 406 CGVEC 420
>gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 675
Score = 134 bits (288), Expect = 4e-031
Identities = 49/65 (75%), Positives = 59/65 (90%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTIV+VWS+LLASIFSLLWVR+DPF + GP + +
Sbjct: 169 FFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRVDPFTTRVTGPDVTQ 348
Query: 187 CGLDC 201
CG++C
Sbjct: 349 CGINC 363
>gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 133 bits (286), Expect = 8e-031
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWV +DPF K GP +
Sbjct: 398 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVXVDPFTTKXTGPDVXX 577
Query: 187 CGLDC 201
CG++C
Sbjct: 578 CGINC 592
>gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300021B12F1, mRNA sequence
Length = 655
Score = 124 bits (266), Expect(2) = 8e-029
Identities = 47/55 (85%), Positives = 53/55 (96%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDG 171
FFAFWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K+ G
Sbjct: 433 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKNQG 597
Score = 22.1 bits (42), Expect(2) = 8e-029
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1 / +2
Query: 160 KDDGPLLEECGLDC 201
K GP ++CGL+C
Sbjct: 587 KTRGPDTKQCGLNC 628
>gb|DT469902.1|DT469902 WS01919.C21_E06 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01919_E06 3', mRNA sequence
Length = 361
Score = 125 bits (267), Expect = 3e-028
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1 / +3
Query: 13 AFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECG 192
AFWVIVHL FLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP ++CG
Sbjct: 3 AFWVIVHLSSFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTRGPDTKQCG 182
Query: 193 LDC 201
L+C
Sbjct: 183 LNC 191
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 391,034,259
Number of Sequences: 369679
Number of extensions: 6306712
Number of successful extensions: 63984
Number of sequences better than 1.0e-020: 151
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 8419272548
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)