TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1724812.2.1
(804 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremonti... 146 1e-034
gb|CV283422.1|CV283422 WS0187.B21_E19 PTxD-IL-N-A-9 Populus... 145 3e-034
gb|CV243768.1|CV243768 WS0252.B21_M19 PT-MB-N-A-15 Populus ... 141 6e-033
gb|DT491072.1|DT491072 WS02546.C21.1_L18 PT-MB-N-A-15 Popul... 141 6e-033
gb|DT505915.1|DT505915 WS01812.C21_D06 PTxD-IL-N-A-9 Populu... 141 6e-033
gb|CF119369.1|CF119369 MTU10CS.P16.H11 Aspen stem cDNA Libr... 139 2e-032
gb|CF119771.1|CF119771 MTU10CS.P6.B05 Aspen stem cDNA Libra... 139 2e-032
gb|CA933833.1|CA933833 MTU3TS.P13.C08 Aspen stem cDNA Libra... 138 3e-032
gb|BU837200.1|BU837200 T095H09 Populus apical shoot cDNA li... 132 4e-030
gb|DT513869.1|DT513869 WS02423.B21_D17 PTxD-ICC-N-A-14 Popu... 109 4e-027
gb|CV254856.1|CV254856 WS02411.B21_G05 PTxD-ICC-N-A-14 Popu... 109 5e-027
gb|DN488765.1|DN488765 S031D05.3pR Populus imbibed seed cDN... 107 1e-026
gb|CV243415.1|CV243415 WS02518.B21_N01 PT-MB-N-A-15 Populus... 107 2e-026
gb|CK102642.1|CK102642 G085P75.5pR Populus tension wood cDN... 110 7e-025
gb|DT512707.1|DT512707 WS02420.B21_A09 PTxD-ICC-N-A-14 Popu... 109 9e-025
gb|DT476446.1|DT476446 WS01229.B21_J24 PT-GT-FL-A-3 Populus... 106 6e-024
gb|BP935319.1|BP935319 BP935319 full-length enriched poplar... 105 1e-023
gb|CK095578.1|CK095578 UA14CPH12.3pR Populus dormant cambiu... 104 1e-023
gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus... 110 1e-023
gb|AJ774738.1|AJ774738 AJ774738 Populus euphratica shoot 3-... 104 2e-023
gb|CV257070.1|CV257070 WS0245.B21_J10 PTxD-ICC-N-A-14 Popul... 109 2e-023
gb|DV466266.1|DV466266 MTUNUL1.P49.D07 NUL Populus fremonti... 105 2e-023
gb|DT517193.1|DT517193 WS02433.B21_J11 PTxD-ICC-N-A-14 Popu... 109 3e-023
gb|DN488227.1|DN488227 R042F04.3pR Populus root cDNA librar... 108 4e-023
gb|DT488152.1|DT488152 WS02535.B21_K09 PT-MB-N-A-15 Populus... 108 5e-023
gb|CV258997.1|CV258997 WS02010.B21_B10 PTxN-IB-N-A-11 Popul... 107 7e-023
gb|CV279650.1|CV279650 WS0132.B21_L13 PTxD-IL-FL-A-4 Populu... 104 8e-023
gb|CV279584.1|CV279584 WS0132.B21_G07 PTxD-IL-FL-A-4 Populu... 104 8e-023
gb|DT487894.1|DT487894 WS02534.B21_P09 PT-MB-N-A-15 Populus... 104 1e-022
gb|DT504462.1|DT504462 WS01313.B21_H10 PTxD-IL-FL-A-4 Popul... 104 1e-022
gb|CV249527.1|CV249527 WS01124.B21_H12 PT-P-FL-A-2 Populus ... 106 1e-022
gb|CX653574.1|CX653574 PO02004A03 Poplar SC cDNA library Po... 106 1e-022
gb|CK091254.1|CK091254 F066P42.3pR Populus flower cDNA libr... 100 2e-022
gb|DN491046.1|DN491046 UM56TC12.3pR Populus female catkins ... 106 2e-022
gb|CA930524.1|CA930524 MTU4CA.P23.F01 Aspen apex cDNA Libra... 105 3e-022
gb|CA930625.1|CA930625 MTU4CA.P24.G01 Aspen apex cDNA Libra... 105 3e-022
gb|CV280250.1|CV280250 WS0135.B21_I11 PTxD-IL-FL-A-4 Populu... 105 3e-022
gb|BP931106.1|BP931106 BP931106 full-length enriched poplar... 105 3e-022
gb|CV240272.1|CV240272 WS0234.B21_P01 PT-MB-A-13 Populus tr... 105 5e-022
gb|CV245243.1|CV245243 WS0256.B21_N22 PT-MB-N-A-15 Populus ... 105 5e-022
gb|BU891342.1|BU891342 P048H10 Populus petioles cDNA librar... 104 7e-022
gb|CV243458.1|CV243458 WS02518.B21_O24 PT-MB-N-A-15 Populus... 104 7e-022
gb|BP932015.1|BP932015 BP932015 full-length enriched poplar... 104 7e-022
gb|AJ771629.1|AJ771629 AJ771629 Populus euphratica root 3-6... 103 2e-021
gb|CK100898.1|CK100898 F007P86.5pR Populus flower cDNA libr... 101 4e-021
gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Popu... 94 6e-021
gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus t... 101 6e-021
gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populu... 101 6e-021
gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populu... 101 6e-021
gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Popul... 101 6e-021
gb|CV240642.1|CV240642 WS0251.B21_P03 PT-MB-N-A-15 Populus ... 94 8e-021
gb|CV244301.1|CV244301 WS0254.B21_E14 PT-MB-N-A-15 Populus ... 100 8e-021
gb|CV245380.1|CV245380 WS0257.B21_E04 PT-MB-N-A-15 Populus ... 100 8e-021
gb|DT489381.1|DT489381 WS02542.B21_B04 PT-MB-N-A-15 Populus... 100 8e-021
gb|DT492065.1|DT492065 WS02549.C21_J03 PT-MB-N-A-15 Populus... 100 8e-021
>gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 903
Score = 146 bits (314), Expect = 1e-034
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = +3 / +2
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LPDGFL+ RG VV WSPQ++VLAHPS ACF+THCGWNS++E + +G+PVVAFPQWG
Sbjct: 485 VLPDGFLEKAGDRGKVVQWSPQEKVLAHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWG 664
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AK+LVD L +GVR+
Sbjct: 665 DQVTNAKYLVDILKVGVRM 721
>gb|CV283422.1|CV283422 WS0187.B21_E19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0187_E19 3', mRNA sequence
Length = 783
Score = 145 bits (312), Expect = 3e-034
Identities = 54/89 (60%), Positives = 69/89 (77%)
Frame = +3 / -3
Query: 12 PVGGPPDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAG 191
P+ D +LPDGFL+ RG VV WSPQ++VL HPS ACF+THCGWNS++E + +G
Sbjct: 766 PLKDAGDDLLVLPDGFLEKAGDRGRVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSG 587
Query: 192 VPVVAFPQWGDQCTDAKFLVDELGMGVRL 278
+PVVAFPQWGDQ T+AK+LVD L +GVR+
Sbjct: 586 MPVVAFPQWGDQVTNAKYLVDILKVGVRM 500
>gb|CV243768.1|CV243768 WS0252.B21_M19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0252_M19 3', mRNA sequence
Length = 908
Score = 141 bits (302), Expect = 6e-033
Identities = 51/79 (64%), Positives = 65/79 (82%)
Frame = +3 / -1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LPD FL+ RG VV WSPQ++VL HPS ACF+THCGWNS++E + +G+PVVAFPQWG
Sbjct: 776 VLPDWFLEKAGDRGKVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWG 597
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AK+LVD L +GVR+
Sbjct: 596 DQVTNAKYLVDILKVGVRM 540
>gb|DT491072.1|DT491072 WS02546.C21.1_L18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02546_L18 3', mRNA sequence
Length = 882
Score = 141 bits (302), Expect = 6e-033
Identities = 51/79 (64%), Positives = 65/79 (82%)
Frame = +3 / -1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LPD FL+ RG VV WSPQ++VL HPS ACF+THCGWNS++E + +G+PVVAFPQWG
Sbjct: 783 VLPDWFLEKAGDRGKVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWG 604
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AK+LVD L +GVR+
Sbjct: 603 DQVTNAKYLVDILKVGVRM 547
>gb|DT505915.1|DT505915 WS01812.C21_D06 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01812_D06 3', mRNA sequence
Length = 867
Score = 141 bits (302), Expect = 6e-033
Identities = 51/79 (64%), Positives = 65/79 (82%)
Frame = +3 / -3
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LPD FL+ RG VV WSPQ++VL HPS ACF+THCGWNS++E + +G+PVVAFPQWG
Sbjct: 730 VLPDWFLEKAGDRGKVVQWSPQEKVLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWG 551
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+AK+LVD L +GVR+
Sbjct: 550 DQVTNAKYLVDILKVGVRM 494
>gb|CF119369.1|CF119369 MTU10CS.P16.H11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 698
Score = 139 bits (298), Expect = 2e-032
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +3 / +3
Query: 39 PLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQW 218
P+LPDGF RG VV WSPQ++VLAHPS ACF+THCGWNST+E + +G+PVVAFPQ
Sbjct: 108 PVLPDGFSKKAGDRGNVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVAFPQL 287
Query: 219 GDQCTDAKFLVDELGMGVRL 278
GDQ T+AK+LVD +GVR+
Sbjct: 288 GDQVTNAKYLVDIFKVGVRM 347
>gb|CF119771.1|CF119771 MTU10CS.P6.B05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 612
Score = 139 bits (298), Expect = 2e-032
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +3 / -1
Query: 39 PLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQW 218
P+LPDGF RG VV WSPQ++VLAHPS ACF+THCGWNST+E + +G+PVVAFPQ
Sbjct: 591 PVLPDGFSKKAGDRGNVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVAFPQL 412
Query: 219 GDQCTDAKFLVDELGMGVRL 278
GDQ T+AK+LVD +GVR+
Sbjct: 411 GDQVTNAKYLVDIFKVGVRM 352
>gb|CA933833.1|CA933833 MTU3TS.P13.C08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 691
Score = 138 bits (297), Expect = 3e-032
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +3 / -2
Query: 39 PLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQW 218
P+LPDGF RG VV WSPQ++VLAHPS ACF+THCGWNST+E + +G+PVVAFPQ
Sbjct: 594 PVLPDGFSKKAGDRGNVVRWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVVAFPQL 415
Query: 219 GDQCTDAKFLVDELGMGVRL 278
GDQ T+AK+LVD +GVR+
Sbjct: 414 GDQVTNAKYLVDIFKVGVRM 355
>gb|BU837200.1|BU837200 T095H09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 718
Score = 132 bits (282), Expect = 4e-030
Identities = 48/73 (65%), Positives = 59/73 (80%)
Frame = +3 / +3
Query: 60 LDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDA 239
L RG VV WSPQ++VLAHPS ACF+THCGWNST+E + +G+PV AFPQWGDQ T+A
Sbjct: 33 LGEAGNRGRVVQWSPQEKVLAHPSVACFVTHCGWNSTMEALTSGMPVAAFPQWGDQVTNA 212
Query: 240 KFLVDELGMGVRL 278
K+LVD L +GVR+
Sbjct: 213 KYLVDILKVGVRM 251
>gb|DT513869.1|DT513869 WS02423.B21_D17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_D17 3', mRNA sequence
Length = 861
Score = 109 bits (233), Expect(3) = 4e-027
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +3 / -1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G +VPW Q VL+HPS CF+THCGWNST E++A+GVP+VAFPQW DQ T+AK + D
Sbjct: 624 QGKIVPWCSQVEVLSHPSIGCFVTHCGWNSTFESLASGVPMVAFPQWTDQLTNAKMVEDV 445
Query: 258 LGMGVRL 278
GVR+
Sbjct: 444 WKTGVRV 424
Score = 27.2 bits (53), Expect(3) = 4e-027
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -1
Query: 1 GRPFLWVVRPTPG 39
GRPFLWV+R G
Sbjct: 711 GRPFLWVIRADRG 673
Score = 26.3 bits (51), Expect(3) = 4e-027
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3 / -1
Query: 405 GGSSDAHVQAFVDEVSRRACGVQV 476
GGSS +++AFVDE++ A +++
Sbjct: 279 GGSSYNNLKAFVDEIAGVATSLEI 208
>gb|CV254856.1|CV254856 WS02411.B21_G05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_G05 3', mRNA sequence
Length = 902
Score = 109 bits (233), Expect(3) = 5e-027
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +3 / -3
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G +VPW Q VL+HPS CF+THCGWNST E++A+GVP+VAFPQW DQ T+AK + D
Sbjct: 627 QGKIVPWCSQVEVLSHPSIGCFVTHCGWNSTFESLASGVPMVAFPQWTDQLTNAKMVEDV 448
Query: 258 LGMGVRL 278
GVR+
Sbjct: 447 WKTGVRV 427
Score = 27.2 bits (53), Expect(3) = 5e-027
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 1 GRPFLWVVRPTPG 39
GRPFLWV+R G
Sbjct: 714 GRPFLWVIRADRG 676
Score = 26.3 bits (51), Expect(3) = 5e-027
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3 / -3
Query: 405 GGSSDAHVQAFVDEVSRRACGVQV 476
GGSS +++AFVDE++ A +++
Sbjct: 282 GGSSYNNLKAFVDEIAGVATSLEI 211
>gb|DN488765.1|DN488765 S031D05.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S031D05 3', mRNA sequence
Length = 705
Score = 107 bits (229), Expect(3) = 1e-026
Identities = 41/67 (61%), Positives = 50/67 (74%)
Frame = +3 / -1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G VVPW Q VL+HPS CF+THCGWNSTLE++ +GVPVVAFP W DQ T+AK + D
Sbjct: 543 QGMVVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVSGVPVVAFPHWTDQGTNAKLIEDV 364
Query: 258 LGMGVRL 278
GVR+
Sbjct: 363 WKTGVRV 343
Score = 29.9 bits (59), Expect(3) = 1e-026
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3 / -1
Query: 405 GGSSDAHVQAFVDEVSR 455
GGSSD +++AFVDEV +
Sbjct: 201 GGSSDKNLKAFVDEVGK 151
Score = 23.1 bits (44), Expect(3) = 1e-026
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -1
Query: 1 GRPFLWVVR 27
G PFLWV+R
Sbjct: 645 GLPFLWVIR 619
>gb|CV243415.1|CV243415 WS02518.B21_N01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02518_N01 3', mRNA sequence
Length = 912
Score = 107 bits (229), Expect(3) = 2e-026
Identities = 41/67 (61%), Positives = 50/67 (74%)
Frame = +3 / -1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G VVPW Q VL+HPS CF+THCGWNSTLE++ +GVPVVAFP W DQ T+AK + D
Sbjct: 534 QGMVVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVSGVPVVAFPHWTDQGTNAKLIEDV 355
Query: 258 LGMGVRL 278
GVR+
Sbjct: 354 WKTGVRV 334
Score = 29.9 bits (59), Expect(3) = 2e-026
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3 / -1
Query: 405 GGSSDAHVQAFVDEVSR 455
GGSSD +++AFVDEV +
Sbjct: 192 GGSSDKNLKAFVDEVGK 142
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / -1
Query: 1 GRPFLWVVR 27
G PFLWVVR
Sbjct: 636 GLPFLWVVR 610
>gb|CK102642.1|CK102642 G085P75.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G085P75 5', mRNA sequence
Length = 476
Score = 110 bits (234), Expect(2) = 7e-025
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = +3 / +3
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP+ FL+ + GRG + W PQD+VLAHPS FLTHCGWNS +ETI++GVPV+ +P +
Sbjct: 189 ILPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNSMMETISSGVPVICWPFFA 368
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ + ++ + G+GV +
Sbjct: 369 DQQPNCRYACTKWGIGVEV 425
Score = 24.0 bits (46), Expect(2) = 7e-025
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 7 PFLWVVRP 30
PFLW++RP
Sbjct: 141 PFLWIIRP 164
>gb|DT512707.1|DT512707 WS02420.B21_A09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_A09 3', mRNA sequence
Length = 848
Score = 109 bits (233), Expect(2) = 9e-025
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +3 / -1
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP+ FL+ + GRG + W PQD+VLAHPS FLTHCGWNS +ETI+ GVPV+ +P +
Sbjct: 638 ILPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNSMMETISCGVPVICWPFFA 459
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ + ++ + G+GV +
Sbjct: 458 DQQPNCRYACTKWGIGVEV 402
Score = 24.0 bits (46), Expect(2) = 9e-025
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / -1
Query: 7 PFLWVVRP 30
PFLW++RP
Sbjct: 686 PFLWIIRP 663
>gb|DT476446.1|DT476446 WS01229.B21_J24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_J24 3', mRNA sequence
Length = 748
Score = 106 bits (227), Expect(2) = 6e-024
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +3 / -2
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP+ FL+ + GRG + W PQD+VLAHPS FLTHCGWN +ETI+ GVPV+ +P +
Sbjct: 666 ILPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNFMMETISCGVPVICWPFFA 487
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ + ++ + G+GV +
Sbjct: 486 DQQPNCRYACTKWGIGVEV 430
Score = 24.0 bits (46), Expect(2) = 6e-024
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / -2
Query: 7 PFLWVVRP 30
PFLW++RP
Sbjct: 714 PFLWIIRP 691
>gb|BP935319.1|BP935319 BP935319 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-076_B15.r 3', mRNA sequence
Length = 640
Score = 105 bits (225), Expect(2) = 1e-023
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +3 / -3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGFL+ V RG +V W+PQ +VLAHP+T F TH GWNSTLE+I GVP++ P +GD
Sbjct: 572 LPDGFLEMVGKRGYIVKWAPQQQVLAHPATGGFWTHNGWNSTLESICEGVPMICQPFFGD 393
Query: 225 QCTDAKFLVDELGMGVRL 278
Q +A+++ D +G+ L
Sbjct: 392 QRVNARYVSDVWKIGIHL 339
Score = 24.0 bits (46), Expect(2) = 1e-023
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 4 RPFLWVVRP 30
+PFLW+VRP
Sbjct: 632 QPFLWLVRP 606
>gb|CK095578.1|CK095578 UA14CPH12.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA14CPH12 3', mRNA sequence
Length = 574
Score = 104 bits (222), Expect(2) = 1e-023
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +3 / -3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGFL+ V RG +V W+PQ VLAHP+T F TH GWNSTLE+I GVP++ P GD
Sbjct: 404 LPDGFLEMVGRRGYIVKWAPQQEVLAHPATGGFWTHSGWNSTLESICEGVPMICQPFSGD 225
Query: 225 QCTDAKFLVDELGMGVRL 278
Q +A+++ D +G+ L
Sbjct: 224 QRVNARYVSDVWKIGIHL 171
Score = 25.4 bits (49), Expect(2) = 1e-023
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 4 RPFLWVVRP 30
+PFLWVVRP
Sbjct: 464 QPFLWVVRP 438
>gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_H12 3', mRNA sequence
Length = 887
Score = 110 bits (234), Expect = 1e-023
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +3 / -1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
+P+GF++ V +G VV WSPQ +VLA+ + CF THCGWNST+E ++ GVP+V P W D
Sbjct: 578 IPEGFVEEVENKGLVVNWSPQVKVLANEAVGCFFTHCGWNSTIEALSLGVPMVTMPGWSD 399
Query: 225 QCTDAKFLVDELGMGVRLR 281
Q T++K + D +GVR +
Sbjct: 398 QQTNSKLVEDAWKVGVRAK 342
>gb|AJ774738.1|AJ774738 AJ774738 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300023G03F1, mRNA sequence
Length = 670
Score = 104 bits (221), Expect(2) = 2e-023
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +3 / +2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGFL+ V RG +V W+PQ VLAHP+T F TH GWNSTLE+I GVP++ P +GD
Sbjct: 206 LPDGFLEMVGKRGYIVKWAPQQEVLAHPATGGFWTHNGWNSTLESICEGVPMICQPFFGD 385
Query: 225 QCTDAKFLVDELGMGVRL 278
Q +A+++ D +G L
Sbjct: 386 QRVNARYVSDVWKIGTHL 439
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 4 RPFLWVVRP 30
+PFLWVVRP
Sbjct: 146 QPFLWVVRP 172
>gb|CV257070.1|CV257070 WS0245.B21_J10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_J10 3', mRNA sequence
Length = 809
Score = 109 bits (233), Expect = 2e-023
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +3 / -1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
+P+GF++ V +G VV WSPQ +VLA+ + CF THCGWNST+E ++ GVP+V P W D
Sbjct: 536 IPEGFVEEVENKGLVVNWSPQVKVLANEAVRCFFTHCGWNSTIEALSLGVPMVTMPGWSD 357
Query: 225 QCTDAKFLVDELGMGVRLR 281
Q T++K + D +GVR +
Sbjct: 356 QQTNSKLVEDAWKVGVRAK 300
>gb|DV466266.1|DV466266 MTUNUL1.P49.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 840
Score = 105 bits (224), Expect(2) = 2e-023
Identities = 39/67 (58%), Positives = 49/67 (73%)
Frame = +3 / +1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G VVPW Q VL+HPS CF+THCGWNSTLE++ +G+PVVAFP W DQ T+ K + D
Sbjct: 484 QGMVVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVSGIPVVAFPHWTDQGTNTKLIEDV 663
Query: 258 LGMGVRL 278
GVR+
Sbjct: 664 WKTGVRV 684
Score = 23.5 bits (45), Expect(2) = 2e-023
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 1 GRPFLWVVR 27
G PFLWVVR
Sbjct: 382 GLPFLWVVR 408
>gb|DT517193.1|DT517193 WS02433.B21_J11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_J11 3', mRNA sequence
Length = 853
Score = 109 bits (232), Expect = 3e-023
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +3 / -3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP FL+ + +G VV WSPQ R+LA+ + CFLTHCGWNST+E ++ G+P+VA PQW D
Sbjct: 719 LPKTFLEDLGEKGCVVGWSPQVRMLANEAVGCFLTHCGWNSTIEALSLGMPMVAMPQWTD 540
Query: 225 QCTDAKFLVDELGMGVRLR 281
Q +AK + D +G+R++
Sbjct: 539 QPPNAKLVEDVWKVGIRVK 483
>gb|DN488227.1|DN488227 R042F04.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R042F04 3', mRNA sequence
Length = 765
Score = 108 bits (231), Expect = 4e-023
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +3 / -3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
+P+GF++ V +G VV WSPQ +VLA+ CF THCGWNST+E ++ GVP+V P W D
Sbjct: 643 IPEGFVEEVENKGLVVNWSPQVKVLANKVVGCFFTHCGWNSTIEALSLGVPMVTMPGWSD 464
Query: 225 QCTDAKFLVDELGMGVRLR 281
Q T++K + D +GVR +
Sbjct: 463 QQTNSKLVEDAWKVGVRAK 407
>gb|DT488152.1|DT488152 WS02535.B21_K09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_K09 3', mRNA sequence
Length = 891
Score = 108 bits (230), Expect = 5e-023
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = +3 / -3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP FL+ + +G VV WSPQ R+LA+ + CFLTHCGWNST+E ++ G+P+VA PQW D
Sbjct: 742 LPKTFLEDLGEKGCVVGWSPQVRMLANEAVGCFLTHCGWNSTIEALSLGMPMVAMPQWTD 563
Query: 225 QCTDAKFLVDELGMGVRL 278
Q +AK + D +G+R+
Sbjct: 562 QPPNAKLVEDVWKVGIRV 509
>gb|CV258997.1|CV258997 WS02010.B21_B10 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02010_B10 3', mRNA sequence
Length = 754
Score = 107 bits (229), Expect = 7e-023
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +3 / -3
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
R +LP+GFLD A G ++ W+PQ +LAHPS F++HCGWNS +E+I GVP+ A+P
Sbjct: 590 RDVLPEGFLDRTANTGKIIGWAPQTDILAHPSVGGFVSHCGWNSIMESIWFGVPIAAWPL 411
Query: 216 WGDQCTDAKFLVDELGMGVRLR 281
+ +Q +A L+ ELG+GV ++
Sbjct: 410 YAEQQLNAFMLIVELGLGVEIK 345
>gb|CV279650.1|CV279650 WS0132.B21_L13 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0132_L13 3', mRNA sequence
Length = 627
Score = 104 bits (221), Expect(2) = 8e-023
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +3 / -1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G +VPW Q VL+HPS CF+THCGWNSTLE++ VPVVAFP W DQ T+AK + D
Sbjct: 606 QGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIADV 427
Query: 258 LGMGVRL 278
GVR+
Sbjct: 426 WKTGVRV 406
Score = 24.9 bits (48), Expect(2) = 8e-023
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -1
Query: 405 GGSSDAHVQAFVDEV 449
GGSSD +++AFV +V
Sbjct: 264 GGSSDKNLKAFVQDV 220
>gb|CV279584.1|CV279584 WS0132.B21_G07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0132_G07 3', mRNA sequence
Length = 632
Score = 104 bits (221), Expect(2) = 8e-023
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +3 / -3
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G +VPW Q VL+HPS CF+THCGWNSTLE++ VPVVAFP W DQ T+AK + D
Sbjct: 609 QGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIADV 430
Query: 258 LGMGVRL 278
GVR+
Sbjct: 429 WKTGVRV 409
Score = 24.9 bits (48), Expect(2) = 8e-023
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 405 GGSSDAHVQAFVDEV 449
GGSSD +++AFV +V
Sbjct: 267 GGSSDKNLKAFVQDV 223
>gb|DT487894.1|DT487894 WS02534.B21_P09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02534_P09 3', mRNA sequence
Length = 712
Score = 104 bits (221), Expect(2) = 1e-022
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +3 / -3
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G +VPW Q VL+HPS CF+THCGWNSTLE++ VPVVAFP W DQ T+AK + D
Sbjct: 668 QGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIADV 489
Query: 258 LGMGVRL 278
GVR+
Sbjct: 488 WKTGVRV 468
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 405 GGSSDAHVQAFVDEV 449
GGSSD +++AFV +V
Sbjct: 326 GGSSDKNLKAFVQDV 282
>gb|DT504462.1|DT504462 WS01313.B21_H10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_H10 3', mRNA sequence
Length = 903
Score = 104 bits (221), Expect(2) = 1e-022
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +3 / -3
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
+G +VPW Q VL+HPS CF+THCGWNSTLE++ VPVVAFP W DQ T+AK + D
Sbjct: 613 QGMIVPWCCQVEVLSHPSIGCFVTHCGWNSTLESLVCEVPVVAFPHWTDQGTNAKLIADV 434
Query: 258 LGMGVRL 278
GVR+
Sbjct: 433 WKTGVRV 413
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 405 GGSSDAHVQAFVDEV 449
GGSSD +++AFV +V
Sbjct: 271 GGSSDKNLKAFVQDV 227
>gb|CV249527.1|CV249527 WS01124.B21_H12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_H12 3', mRNA sequence
Length = 696
Score = 106 bits (227), Expect = 1e-022
Identities = 38/55 (69%), Positives = 48/55 (87%)
Frame = +3 / -1
Query: 114 VLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDELGMGVRL 278
VL HPS ACF+THCGWNS++E + +G+PVVAFPQWGDQ T+AK+LVD L +GVR+
Sbjct: 696 VLTHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGDQVTNAKYLVDILKVGVRM 532
>gb|CX653574.1|CX653574 PO02004A03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02004A03 5', mRNA sequence
Length = 544
Score = 106 bits (227), Expect = 1e-022
Identities = 40/84 (47%), Positives = 59/84 (70%)
Frame = +3 / +1
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D R +LP+GFLD A G ++ W+PQ +LAHPS F++HCGWNS LE+I GVP+ A+
Sbjct: 28 DPRDVLPEGFLDRTAITGKIIGWAPQTDILAHPSVGGFVSHCGWNSILESIWFGVPIAAW 207
Query: 210 PQWGDQCTDAKFLVDELGMGVRLR 281
P + +Q +A ++ ELG+GV ++
Sbjct: 208 PLYAEQQLNAFQMIVELGLGVEIK 279
>gb|CK091254.1|CK091254 F066P42.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F066P42 3', mRNA sequence
Length = 782
Score = 100 bits (213), Expect(2) = 2e-022
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +3 / -1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP+GFL+ + GR +V W+PQ VLAHP+ F TH GWNSTLE+I GVP++ P + D
Sbjct: 500 LPNGFLEDLNGRAHIVKWAPQSEVLAHPAVGAFWTHNGWNSTLESICEGVPMICMPCFTD 321
Query: 225 QCTDAKFLVDELGMGVRLRGPL 290
Q +A+++ D +G++L L
Sbjct: 320 QMANARYVSDVWRVGMQLENGL 255
Score = 25.4 bits (49), Expect(2) = 2e-022
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 4 RPFLWVVRP 30
+PFLWVVRP
Sbjct: 560 QPFLWVVRP 534
>gb|DN491046.1|DN491046 UM56TC12.3pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM56TC12 3', mRNA sequence
Length = 726
Score = 106 bits (226), Expect = 2e-022
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +3 / -1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
+P FL + +G VV WSPQ R+LA+ + CFLTHCGWNST+E ++ G+P+VA PQW D
Sbjct: 660 VPKTFLKDLGEKGCVVGWSPQVRMLANEAVGCFLTHCGWNSTIEALSLGMPMVAMPQWTD 481
Query: 225 QCTDAKFLVDELGMGVRLR 281
Q +AK + D +G+R++
Sbjct: 480 QPPNAKLVEDVWKVGIRVK 424
>gb|CA930524.1|CA930524 MTU4CA.P23.F01 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 428
Score = 105 bits (225), Expect = 3e-022
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +3 / -3
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
R +LP+GFLD A G ++ W+PQ +LAHPS F++HCGWNS LE+I GVP+ A+P
Sbjct: 276 RDVLPEGFLDRTANTGKIIGWAPQTDILAHPSVGGFVSHCGWNSILESIWFGVPIAAWPL 97
Query: 216 WGDQCTDAKFLVDELGMGVRLR 281
+ +Q +A ++ ELG+GV ++
Sbjct: 96 YAEQQFNAFQIIVELGLGVEIK 31
>gb|CA930625.1|CA930625 MTU4CA.P24.G01 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 428
Score = 105 bits (225), Expect = 3e-022
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +3 / -3
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
R +LP+GFLD A G ++ W+PQ +LAHPS F++HCGWNS LE+I GVP+ A+P
Sbjct: 276 RDVLPEGFLDRTANTGKIIGWAPQTDILAHPSVGGFVSHCGWNSILESIWFGVPIAAWPL 97
Query: 216 WGDQCTDAKFLVDELGMGVRLR 281
+ +Q +A ++ ELG+GV ++
Sbjct: 96 YAEQQFNAFQIIVELGLGVEIK 31
>gb|CV280250.1|CV280250 WS0135.B21_I11 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0135_I11 3', mRNA sequence
Length = 916
Score = 105 bits (225), Expect = 3e-022
Identities = 40/82 (48%), Positives = 58/82 (70%)
Frame = +3 / -2
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
R +LP+GFLD A G ++ W+PQ +LAHPS F++HCGWNS LE+I GVP+ A+P
Sbjct: 582 RDVLPEGFLDRTANIGKIIGWAPQTDILAHPSVRGFVSHCGWNSILESIWFGVPIAAWPL 403
Query: 216 WGDQCTDAKFLVDELGMGVRLR 281
+ +Q +A L+ ELG+GV ++
Sbjct: 402 YAEQQLNAFELIVELGLGVEIK 337
>gb|BP931106.1|BP931106 BP931106 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-018_K10.r 3', mRNA sequence
Length = 608
Score = 105 bits (225), Expect = 3e-022
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +3 / -3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGFL+ V RG +V W+PQ +VLAHP+T F TH GWNSTLE+I GVP++ P +GD
Sbjct: 567 LPDGFLEMVGKRGYIVKWAPQQQVLAHPATGGFWTHNGWNSTLESICEGVPMICQPFFGD 388
Query: 225 QCTDAKFLVDELGMGVRL 278
Q +A+++ D +G+ L
Sbjct: 387 QRVNARYVSDVWKIGIHL 334
>gb|CV240272.1|CV240272 WS0234.B21_P01 PT-MB-A-13 Populus trichocarpa cDNA clone WS0234_P01
3', mRNA sequence
Length = 748
Score = 105 bits (223), Expect = 5e-022
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +3 / -2
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D R +LP+GFLD G ++ W+PQ +LAHPS F++HCGWNS LE+I GVP+ +
Sbjct: 543 DPRDVLPEGFLDRTTNIGKIIGWAPQTDILAHPSVGGFVSHCGWNSVLESIWFGVPIATW 364
Query: 210 PQWGDQCTDAKFLVDELGMGVRLR 281
P +Q +A L+ ELG+GV ++
Sbjct: 363 PLHAEQQLNAFMLIVELGLGVEIK 292
>gb|CV245243.1|CV245243 WS0256.B21_N22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0256_N22 3', mRNA sequence
Length = 932
Score = 105 bits (223), Expect = 5e-022
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +3 / -1
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
R +LP+GFLD A G ++ W+PQ +LAHPS F++HCGWNS LE+I GVP+ A+P
Sbjct: 611 REVLPEGFLDRTANIGKIIGWAPQTDILAHPSVRGFVSHCGWNSILESIWFGVPIAAWPL 432
Query: 216 WGDQCTDAKFLVDELGMGVRLR 281
+ +Q +A ++ ELG+GV ++
Sbjct: 431 YAEQQLNAFQIIVELGLGVEIK 366
>gb|BU891342.1|BU891342 P048H10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 532
Score = 104 bits (222), Expect = 7e-022
Identities = 38/78 (48%), Positives = 54/78 (69%)
Frame = +3 / +2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGFLD +G +VPW+PQ VLAH + F+THCGWNS LE+IA GVP++ P +GD
Sbjct: 59 LPDGFLDRTTSQGLLVPWTPQSEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPFFGD 238
Query: 225 QCTDAKFLVDELGMGVRL 278
Q + + + D +G+++
Sbjct: 239 QRLNGRMVEDAWKIGLQV 292
>gb|CV243458.1|CV243458 WS02518.B21_O24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02518_O24 3', mRNA sequence
Length = 910
Score = 104 bits (222), Expect = 7e-022
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = +3 / -2
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
R +LP+GF D A G ++ W+PQ +LAHPS F++HCGWNS LE+I GVP+ A+P
Sbjct: 669 RDVLPEGFFDRTANIGKIIGWAPQTDILAHPSVGGFVSHCGWNSILESIWFGVPIAAWPL 490
Query: 216 WGDQCTDAKFLVDELGMGVRLR 281
+ +Q +A L+ ELG GV ++
Sbjct: 489 YAEQQFNAFMLIVELGFGVEIK 424
>gb|BP932015.1|BP932015 BP932015 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-030_L18.r 3', mRNA sequence
Length = 574
Score = 104 bits (222), Expect = 7e-022
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = +3 / -2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGFL+ + RG +V W+PQ +VLAHP+T F TH GWNSTLE+I GVP++ P +GD
Sbjct: 564 LPDGFLEMLVKRGYIVKWAPQQQVLAHPATGGFWTHNGWNSTLESICEGVPMICQPFFGD 385
Query: 225 QCTDAKFLVDELGMGVRL 278
Q +A+++ D +G+ L
Sbjct: 384 QRVNARYVSDVWKIGIHL 331
>gb|AJ771629.1|AJ771629 AJ771629 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600003E05F1, mRNA sequence
Length = 534
Score = 103 bits (219), Expect = 2e-021
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +3 / +3
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
R LP+GFLD A G V+ W+PQ +LAHPS F++HCGWNS LE+I GVP+ +P
Sbjct: 108 RDALPEGFLDRTAKIGKVIGWAPQTDILAHPSVGGFVSHCGWNSILESIWFGVPIATWPL 287
Query: 216 WGDQCTDAKFLVDELGMGVRLR 281
+ +Q +A L+ ELG GV ++
Sbjct: 288 YAEQQFNAFMLIVELGFGVEIK 353
>gb|CK100898.1|CK100898 F007P86.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F007P86 5', mRNA sequence
Length = 624
Score = 101 bits (216), Expect = 4e-021
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = +3 / -3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GFLD +G VVPWSPQ VLAH + F+THCGWNS LE+IA GVP++ P +GD
Sbjct: 511 LPHGFLDRTTSQGLVVPWSPQLEVLAHRAVGVFVTHCGWNSLLESIAGGVPMICRPFFGD 332
Query: 225 QCTDAKFLVDELGMGVRL 278
Q + + + D +G+++
Sbjct: 331 QRLNGRMIEDVWEIGLKV 278
>gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_J17 3', mRNA sequence
Length = 777
Score = 94.1 bits (199), Expect(2) = 6e-021
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = +3 / -3
Query: 42 LLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWG 221
+LP F + RG + W PQ+ VL HPS FLTHCGW S +E+I++GVP++ +P G
Sbjct: 547 ILPPEFTEETKDRGFICSWCPQEEVLNHPSVGGFLTHCGWTSIIESISSGVPMLCWPFAG 368
Query: 222 DQCTDAKFLVDELGMGVRL 278
DQ T+ ++ E G+G+ +
Sbjct: 367 DQQTNCRYTCTEWGIGMEI 311
Score = 26.7 bits (52), Expect(2) = 6e-021
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 1 GRPFLWVVRP 30
G PFLW++RP
Sbjct: 601 GHPFLWIIRP 572
>gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_G13 3', mRNA sequence
Length = 883
Score = 101 bits (215), Expect = 6e-021
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +3 / -3
Query: 39 PLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQW 218
P+ P F+ RG + W PQ+ VL+HPS F+THCGW ST+E+I++GVP++ +P +
Sbjct: 629 PIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSF 450
Query: 219 GDQCTDAKFLVDELGMGVRL 278
GDQ T+ ++ E G+G+ +
Sbjct: 449 GDQQTNCRYTCTEWGIGMEI 390
>gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_A16 3', mRNA sequence
Length = 879
Score = 101 bits (215), Expect = 6e-021
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +3 / -2
Query: 39 PLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQW 218
P+ P F+ RG + W PQ+ VL+HPS F+THCGW ST+E+I++GVP++ +P +
Sbjct: 647 PIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSF 468
Query: 219 GDQCTDAKFLVDELGMGVRL 278
GDQ T+ ++ E G+G+ +
Sbjct: 467 GDQQTNCRYTCTEWGIGMEI 408
>gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_M10 3', mRNA sequence
Length = 887
Score = 101 bits (215), Expect = 6e-021
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +3 / -1
Query: 39 PLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQW 218
P+ P F+ RG + W PQ+ VL+HPS F+THCGW ST+E+I++GVP++ +P +
Sbjct: 647 PIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSF 468
Query: 219 GDQCTDAKFLVDELGMGVRL 278
GDQ T+ ++ E G+G+ +
Sbjct: 467 GDQQTNCRYTCTEWGIGMEI 408
>gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_F21 3', mRNA sequence
Length = 844
Score = 101 bits (215), Expect = 6e-021
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +3 / -3
Query: 39 PLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQW 218
P+ P F+ RG + W PQ+ VL+HPS F+THCGW ST+E+I++GVP++ +P +
Sbjct: 647 PIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWPSF 468
Query: 219 GDQCTDAKFLVDELGMGVRL 278
GDQ T+ ++ E G+G+ +
Sbjct: 467 GDQQTNCRYTCTEWGIGMEI 408
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 347,987,372
Number of Sequences: 369679
Number of extensions: 4969078
Number of successful extensions: 51564
Number of sequences better than 1.0e-020: 56
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 10444609700
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)