TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716365.2.1
(936 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT485334.1|DT485334 WS02527.B21_O22 PT-MB-N-A-15 Populus... 348 e-111
gb|DT515685.1|DT515685 WS02429.B21.1_D22 PTxD-ICC-N-A-14 Po... 348 e-111
gb|DT523539.1|DT523539 WS02039.B21_P11 PTxN-IB-N-A-11 Popul... 348 e-110
gb|CV232433.1|CV232433 WS0197.B21_J03 PT-DX-N-A-10 Populus ... 348 2e-095
gb|CV261322.1|CV261322 WS02016.B21_H12 PTxN-IB-N-A-11 Popul... 314 4e-095
gb|DT482867.1|DT482867 WS02521.B21_A02 PT-MB-N-A-15 Populus... 344 6e-094
gb|DN494990.1|DN494990 N009H07.5pR Populus bark cDNA librar... 304 2e-084
gb|CK098382.1|CK098382 A012P77.5pR Hybrid aspen plasmid lib... 262 1e-082
gb|DT507221.1|DT507221 WS02417.BR_K22 PTxD-ICC-N-A-14 Popul... 278 3e-074
gb|DT511863.1|DT511863 WS02417.B21_K22 PTxD-ICC-N-A-14 Popu... 278 3e-074
gb|DT476893.1|DT476893 WS01231.B21_D17 PT-GT-FL-A-3 Populus... 273 1e-073
gb|BU836496.1|BU836496 T087C12 Populus apical shoot cDNA li... 263 4e-073
gb|CN523462.1|CN523462 GQ015M10.T3_B08 GQ015 Populus tricho... 267 9e-071
gb|CA931263.1|CA931263 MTU2TA.P4.H08 Aspen apex cDNA Librar... 261 4e-069
gb|AI162152.1|AI162152 A012P77U Hybrid aspen plasmid librar... 259 2e-068
gb|DN499789.1|DN499789 T087C12.5pR Populus shoot meristem c... 194 2e-066
gb|CV261185.1|CV261185 WS02016.B21_B13 PTxN-IB-N-A-11 Popul... 219 2e-056
gb|CV241963.1|CV241963 WS02513.B21_M01 PT-MB-N-A-15 Populus... 219 3e-056
gb|CF228348.1|CF228348 PtaXM0011H7H0715 Poplar cDNA library... 218 4e-056
gb|DN489293.1|DN489293 T021A10.3pR Populus shoot meristem c... 146 7e-049
gb|BI137613.1|BI137613 F089P39Y Populus flower cDNA library... 146 7e-049
gb|BI135709.1|BI135709 F057P33Y Populus flower cDNA library... 146 1e-045
gb|DT520021.1|DT520021 WS02446.B21.1_F15 PTxD-ICC-N-A-14 Po... 182 3e-045
gb|BI137634.1|BI137634 F089P73Y Populus flower cDNA library... 146 2e-043
gb|CV259744.1|CV259744 WS02012.B21_C15 PTxN-IB-N-A-11 Popul... 174 6e-043
gb|DN486644.1|DN486644 P047G09.3pR Populus petioles cDNA li... 169 2e-041
gb|CX168744.1|CX168744 E01_69-81_09.ab1 leaf inoculated wit... 168 4e-041
gb|BI129456.1|BI129456 G090P88Y Populus cambium cDNA librar... 152 1e-037
gb|BI119621.1|BI119621 F002P40Y Populus flower cDNA library... 103 2e-037
gb|CV264069.1|CV264069 WS02023.B21_I14 PTxN-IB-N-A-11 Popul... 149 3e-035
gb|DT481483.1|DT481483 WS02532.BR_A02 PT-MB-N-A-15 Populus ... 146 2e-034
gb|DT486813.1|DT486813 WS02532.B21_A02 PT-MB-N-A-15 Populus... 146 2e-034
gb|BP933399.1|BP933399 BP933399 full-length enriched poplar... 133 1e-030
gb|DV463015.1|DV463015 MTUNUL1.P10.F03 NUL Populus fremonti... 80 4e-030
gb|CV254493.1|CV254493 WS0241.B21_G02 PTxD-ICC-N-A-14 Popul... 93 5e-030
gb|DT518009.1|DT518009 WS02435.B21_P01 PTxD-ICC-N-A-14 Popu... 93 5e-030
gb|BU813391.1|BU813391 N009H07 Populus bark cDNA library Po... 120 2e-029
gb|DT517326.1|DT517326 WS02433.B21_P21 PTxD-ICC-N-A-14 Popu... 90 7e-029
gb|CF232477.1|CF232477 PtaJXO0011A11A1101 Poplar cDNA libra... 88 2e-028
gb|CV233282.1|CV233282 WS0121.B21_J05 PT-GT-FL-A-3 Populus ... 116 2e-027
gb|DN489864.1|DN489864 T087C12.3pR Populus shoot meristem c... 118 6e-026
gb|BI131092.1|BI131092 G115P15Y Populus cambium cDNA librar... 108 6e-023
gb|CK092664.1|CK092664 G090P88.3pR Populus tension wood cDN... 106 2e-022
>gb|DT485334.1|DT485334 WS02527.B21_O22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_O22 3', mRNA sequence
Length = 904
Score = 348 bits (755), Expect(2) = e-111
Identities = 142/153 (92%), Positives = 146/153 (95%)
Frame = -3 / -1
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
L NQV PLPEL+AEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 661 LGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 482
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLL+KEPQHRLA KRGATEIKQH
Sbjct: 481 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQH 302
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSS 314
PFFEGVNWALIRCATPP+IPKPVEI R A +S
Sbjct: 301 PFFEGVNWALIRCATPPEIPKPVEIERIPAPAS 203
Score = 239 bits (516), Expect(2) = 8e-070
Identities = 100/128 (78%), Positives = 107/128 (83%)
Frame = +3 / +3
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R ISTGLGISGGVA INAQ TPSK GCCFISVAPRL AN C GS S PL+RSLAAKLT
Sbjct: 222 RSISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 401
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYS 692
TGDSGN +G PTTLNNVA FP+PL GV P +SSY+ +P VHQSTALP PSP +ISGAKYS
Sbjct: 402 TGDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYS 581
Query: 693 WVPTKDID 716
WVPTKDID
Sbjct: 582 WVPTKDID 605
Score = 165 bits (355), Expect = 4e-040
Identities = 73/143 (51%), Positives = 94/143 (65%)
Frame = +2 / +2
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LNWL D+ W T *CPI+ FKE VL YF G++ *SML F +Q+P +IP KT
Sbjct: 227 NLNWLRDLGWGSTAY*CPIHAFKEGVLLYFSGASFGC*SMLWFFYKQTPYEIPSCKTDDW 406
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMG 697
*FWE L+N +EQC + R+ E E + I + +K PPV STSM L + RCQ+L+G
Sbjct: 407 *FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTLDDLRCQILVG 586
Query: 698 ANKRHRPCICRLCNKLRKWSDLI 766
+NKRH PCIC LC +LR W+DLI
Sbjct: 587 SNKRH*PCICWLCYELR*WTDLI 655
Score = 150 bits (322), Expect(2) = 7e-039
Identities = 68/142 (47%), Positives = 93/142 (65%)
Frame = -2 / -3
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S Q+ +*A RA+RCKV VFCW+P V GT*+++G +WKCC LVD W+ +* +R++++
Sbjct: 653 SSQSIT*AHSRANRCKVNVFCWNPRVFGT*DHQG*RSWKCC*LVDFWNFSI*TLIRENSL 474
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL 405
Q W+ IVQ W +PRIT +FC GS+ G A + T+A IS+ H NK P+L
Sbjct: 473 QGIWKPSHIVQCCWPASSIPRITSRQFCS*GSHKGFACKRTTA*ISIQTRRH*NKATPLL 294
Query: 404 *RC*LGINQVCHST*YPQAS*D 339
*R LGIN +C+ T P AS*D
Sbjct: 293 *RRELGINTLCYPTRDP*AS*D 228
Score = 114 bits (244), Expect(2) = 4e-028
Identities = 67/153 (43%), Positives = 85/153 (55%)
Frame = -1 / -2
Query: 798 KKIKRQRQTWQIRSDHFLSLLQSRQMQGLCLLLAPMSTWHLKL*RARGMEVL*TGGHLAY 619
++I + +I+S H+LS QS+QMQG CLLL P S WHL+ R + MEVL TGG L +
Sbjct: 687 RRIGNPKMN*EIKSVHYLSS*QSQQMQGQCLLLEPTSIWHLRSSRVKVMEVLLTGGLLEF 508
Query: 618 SCMSFSSARHHSKVLGIGRHCST*LDNP*GSQNHXXXXXXXXXXLGDCSSRNLSID*RIS 439
M+ S + S+ L HCS L + SQNH G C +N SID* +
Sbjct: 507 FYMNSYSGKLPSRDLETEPHCSMLLASLFDSQNHQSSVLQLGIS*GVCL*KNHSID*HPN 328
Query: 438 VEPQK*NSTRSLKVLIGH*SGVPLHLISPSQLR 340
P K*++T SLK IGH* V H S SQLR
Sbjct: 327 EAPLK*SNTPSLKA*IGH*YAVLPHPRSLSQLR 229
Score = 73.0 bits (153), Expect(2) = e-111
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -3 / -1
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCVTTTTCFSPRFF 818
D + NP YCVQP CIEP+C+QPSCV TTCF PR F
Sbjct: 811 DPFRKNPVYCVQPACIEPSCIQPSCVAPTTCFGPRLF 701
Score = 45.5 bits (93), Expect(2) = 8e-070
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +3 / +3
Query: 807 DLEEKKRGEKHVVVVTQEGCIQAGSMHTGCTQ*AG 911
DL EK+RG KHVV TQ+G + GS+ G TQ* G
Sbjct: 690 DLLEKRRGPKHVVGATQDGWMHEGSIQAG*TQ*TG 794
Score = 30.9 bits (61), Expect(2) = 7e-039
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3 / -1
Query: 901 CVQPVCIEPACMQPSCVTTTTCFSPR 824
C++P CI+P+C+ P+ FS +
Sbjct: 769 CIEPSCIQPSCVAPTTCFGPRLFSSK 692
Score = 30.4 bits (60), Expect(2) = 4e-028
Identities = 7/12 (58%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 886 CIEPACMQPSCV 851
C++PAC++PSC+
Sbjct: 784 CVQPACIEPSCI 749
>gb|DT515685.1|DT515685 WS02429.B21.1_D22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_D22 3', mRNA sequence
Length = 894
Score = 348 bits (755), Expect(2) = e-111
Identities = 142/153 (92%), Positives = 146/153 (95%)
Frame = -3 / -3
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
L NQV PLPEL+AEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 655 LGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 476
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLL+KEPQHRLA KRGATEIKQH
Sbjct: 475 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQH 296
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSS 314
PFFEGVNWALIRCATPP+IPKPVEI R A +S
Sbjct: 295 PFFEGVNWALIRCATPPEIPKPVEIERIPAPAS 197
Score = 239 bits (516), Expect(2) = 8e-070
Identities = 100/128 (78%), Positives = 107/128 (83%)
Frame = +3 / +3
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R ISTGLGISGGVA INAQ TPSK GCCFISVAPRL AN C GS S PL+RSLAAKLT
Sbjct: 216 RSISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 395
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYS 692
TGDSGN +G PTTLNNVA FP+PL GV P +SSY+ +P VHQSTALP PSP +ISGAKYS
Sbjct: 396 TGDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYS 575
Query: 693 WVPTKDID 716
WVPTKDID
Sbjct: 576 WVPTKDID 599
Score = 165 bits (355), Expect = 4e-040
Identities = 73/143 (51%), Positives = 94/143 (65%)
Frame = +2 / +2
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LNWL D+ W T *CPI+ FKE VL YF G++ *SML F +Q+P +IP KT
Sbjct: 221 NLNWLRDLGWGSTAY*CPIHAFKEGVLLYFSGASFGC*SMLWFFYKQTPYEIPSCKTDDW 400
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMG 697
*FWE L+N +EQC + R+ E E + I + +K PPV STSM L + RCQ+L+G
Sbjct: 401 *FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTLDDLRCQILVG 580
Query: 698 ANKRHRPCICRLCNKLRKWSDLI 766
+NKRH PCIC LC +LR W+DLI
Sbjct: 581 SNKRH*PCICWLCYELR*WTDLI 649
Score = 150 bits (322), Expect(2) = 7e-039
Identities = 68/142 (47%), Positives = 93/142 (65%)
Frame = -2 / -2
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S Q+ +*A RA+RCKV VFCW+P V GT*+++G +WKCC LVD W+ +* +R++++
Sbjct: 647 SSQSIT*AHSRANRCKVNVFCWNPRVFGT*DHQG*RSWKCC*LVDFWNFSI*TLIRENSL 468
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL 405
Q W+ IVQ W +PRIT +FC GS+ G A + T+A IS+ H NK P+L
Sbjct: 467 QGIWKPSHIVQCCWPASSIPRITSRQFCS*GSHKGFACKRTTA*ISIQTRRH*NKATPLL 288
Query: 404 *RC*LGINQVCHST*YPQAS*D 339
*R LGIN +C+ T P AS*D
Sbjct: 287 *RRELGINTLCYPTRDP*AS*D 222
Score = 114 bits (244), Expect(2) = 4e-028
Identities = 67/153 (43%), Positives = 85/153 (55%)
Frame = -1 / -1
Query: 798 KKIKRQRQTWQIRSDHFLSLLQSRQMQGLCLLLAPMSTWHLKL*RARGMEVL*TGGHLAY 619
++I + +I+S H+LS QS+QMQG CLLL P S WHL+ R + MEVL TGG L +
Sbjct: 681 RRIGNPKMN*EIKSVHYLSS*QSQQMQGQCLLLEPTSIWHLRSSRVKVMEVLLTGGLLEF 502
Query: 618 SCMSFSSARHHSKVLGIGRHCST*LDNP*GSQNHXXXXXXXXXXLGDCSSRNLSID*RIS 439
M+ S + S+ L HCS L + SQNH G C +N SID* +
Sbjct: 501 FYMNSYSGKLPSRDLETEPHCSMLLASLFDSQNHQSSVLQLGIS*GVCL*KNHSID*HPN 322
Query: 438 VEPQK*NSTRSLKVLIGH*SGVPLHLISPSQLR 340
P K*++T SLK IGH* V H S SQLR
Sbjct: 321 EAPLK*SNTPSLKA*IGH*YAVLPHPRSLSQLR 223
Score = 73.0 bits (153), Expect(2) = e-111
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -3 / -3
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCVTTTTCFSPRFF 818
D + NP YCVQP CIEP+C+QPSCV TTCF PR F
Sbjct: 805 DPFRKNPVYCVQPACIEPSCIQPSCVAPTTCFGPRLF 695
Score = 45.5 bits (93), Expect(2) = 8e-070
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +3 / +3
Query: 807 DLEEKKRGEKHVVVVTQEGCIQAGSMHTGCTQ*AG 911
DL EK+RG KHVV TQ+G + GS+ G TQ* G
Sbjct: 684 DLLEKRRGPKHVVGATQDGWMHEGSIQAG*TQ*TG 788
Score = 30.9 bits (61), Expect(2) = 7e-039
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3 / -3
Query: 901 CVQPVCIEPACMQPSCVTTTTCFSPR 824
C++P CI+P+C+ P+ FS +
Sbjct: 763 CIEPSCIQPSCVAPTTCFGPRLFSSK 686
Score = 30.4 bits (60), Expect(2) = 4e-028
Identities = 7/12 (58%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 886 CIEPACMQPSCV 851
C++PAC++PSC+
Sbjct: 778 CVQPACIEPSCI 743
>gb|DT523539.1|DT523539 WS02039.B21_P11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02039_P11 3', mRNA sequence
Length = 925
Score = 348 bits (755), Expect(2) = e-110
Identities = 142/153 (92%), Positives = 146/153 (95%)
Frame = -3 / -1
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
L NQV PLPEL+AEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 733 LGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 554
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLL+KEPQHRLA KRGATEIKQH
Sbjct: 553 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQH 374
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSS 314
PFFEGVNWALIRCATPP+IPKPVEI R A +S
Sbjct: 373 PFFEGVNWALIRCATPPEIPKPVEIERIPAPAS 275
Score = 239 bits (516), Expect(2) = 6e-070
Identities = 100/128 (78%), Positives = 107/128 (83%)
Frame = +3 / +3
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R ISTGLGISGGVA INAQ TPSK GCCFISVAPRL AN C GS S PL+RSLAAKLT
Sbjct: 294 RSISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 473
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYS 692
TGDSGN +G PTTLNNVA FP+PL GV P +SSY+ +P VHQSTALP PSP +ISGAKYS
Sbjct: 474 TGDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYS 653
Query: 693 WVPTKDID 716
WVPTKDID
Sbjct: 654 WVPTKDID 677
Score = 161 bits (347), Expect = 5e-039
Identities = 72/143 (50%), Positives = 93/143 (65%)
Frame = +2 / +2
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LNWL D+RW T *CPI+ FKE VL YF ++ *SML F +Q+P +IP KT
Sbjct: 299 NLNWLRDLRWGSTAY*CPIHAFKEGVLLYFSCASFGC*SMLWFFYKQTPYEIPSCKTDNW 478
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMG 697
*FWE L+N +EQC + R+ E E + I + +K PPV STSM L + RCQ+L+G
Sbjct: 479 *FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTLDDLRCQILVG 658
Query: 698 ANKRHRPCICRLCNKLRKWSDLI 766
+NKRH PCIC LC +L W+DLI
Sbjct: 659 SNKRH*PCICWLCYELG*WTDLI 727
Score = 147 bits (315), Expect(2) = 6e-038
Identities = 67/142 (47%), Positives = 93/142 (65%)
Frame = -2 / -3
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S Q+ + A RA+RCKV VFCW+P V GT*+++G +WKCC LVD W+ +* +R++++
Sbjct: 725 SSQSITRAHSRANRCKVNVFCWNPRVFGT*DHQG*RSWKCC*LVDFWNFSI*TLIRENSL 546
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL 405
Q W+ IVQ W +PRIT +FC GS+ G A + T+A IS+ + NK P+L
Sbjct: 545 QGIWKPSHIVQCCWPASSIPRITSCQFCS*GSHKGFACKRTTA*ISIQTRRN*NKATPLL 366
Query: 404 *RC*LGINQVCHST*YPQAS*D 339
*R LGIN +C+ T* P AS*D
Sbjct: 365 *RRELGINTLCYPT*DP*AS*D 300
Score = 110 bits (235), Expect(2) = 7e-027
Identities = 66/153 (43%), Positives = 84/153 (54%)
Frame = -1 / -2
Query: 798 KKIKRQRQTWQIRSDHFLSLLQSRQMQGLCLLLAPMSTWHLKL*RARGMEVL*TGGHLAY 619
++I + +I+S H+ S QS+QMQG CLLL P S WHL+ R + MEVL TGG L +
Sbjct: 759 RRIGNPKMN*EIKSVHYPSS*QSQQMQGQCLLLEPTSIWHLRSSRVKVMEVLLTGGLLEF 580
Query: 618 SCMSFSSARHHSKVLGIGRHCST*LDNP*GSQNHXXXXXXXXXXLGDCSSRNLSID*RIS 439
M+ S + S+ L HCS L + SQNH G C +N SID* +
Sbjct: 579 FYMNSYSGKLPSRDLETEPHCSMLLASLFDSQNHQLSVLQLGIS*GVCL*KNHSID*HPN 400
Query: 438 VEPQK*NSTRSLKVLIGH*SGVPLHLISPSQLR 340
K*++T SLK IGH* V HL S SQLR
Sbjct: 399 EAQLK*SNTPSLKA*IGH*YAVLPHLRSLSQLR 301
Score = 70.3 bits (147), Expect(2) = e-110
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -3 / -1
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCVTTTTCFSPRFF 818
D + P YCVQP CIEP+C+QPSCV TTCF PR F
Sbjct: 883 DPFRKTPVYCVQPACIEPSCIQPSCVAPTTCFGPRLF 773
Score = 46.0 bits (94), Expect(2) = 6e-070
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3 / +3
Query: 807 DLEEKKRGEKHVVVVTQEGCIQAGSMHTGCTQ*AGL 914
DL EK+RG KHVV TQ+G + GS+ G TQ* G+
Sbjct: 762 DLLEKRRGPKHVVGATQDGWMHEGSIQAG*TQ*TGV 869
Score = 30.9 bits (61), Expect(2) = 6e-038
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3 / -1
Query: 901 CVQPVCIEPACMQPSCVTTTTCFSPR 824
C++P CI+P+C+ P+ FS +
Sbjct: 841 CIEPSCIQPSCVAPTTCFGPRLFSSK 764
Score = 30.4 bits (60), Expect(2) = 7e-027
Identities = 7/12 (58%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 886 CIEPACMQPSCV 851
C++PAC++PSC+
Sbjct: 856 CVQPACIEPSCI 821
>gb|CV232433.1|CV232433 WS0197.B21_J03 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0197_J03 3', mRNA sequence
Length = 745
Score = 348 bits (755), Expect = 2e-095
Identities = 142/153 (92%), Positives = 146/153 (95%)
Frame = -3 / -1
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
L NQV PLPEL+AEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 709 LGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 530
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLL+KEPQHRLA KRGATEIKQH
Sbjct: 529 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQH 350
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSS 314
PFFEGVNWALIRCATPP+IPKPVEI R A +S
Sbjct: 349 PFFEGVNWALIRCATPPEIPKPVEIERIPAPAS 251
Score = 239 bits (516), Expect = 2e-062
Identities = 100/128 (78%), Positives = 107/128 (83%)
Frame = +3 / +3
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R ISTGLGISGGVA INAQ TPSK GCCFISVAPRL AN C GS S PL+RSLAAKLT
Sbjct: 270 RSISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 449
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYS 692
TGDSGN +G PTTLNNVA FP+PL GV P +SSY+ +P VHQSTALP PSP +ISGAKYS
Sbjct: 450 TGDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYS 629
Query: 693 WVPTKDID 716
WVPTKDID
Sbjct: 630 WVPTKDID 653
Score = 166 bits (357), Expect = 2e-040
Identities = 73/143 (51%), Positives = 94/143 (65%)
Frame = +2 / +2
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LNWL D+ W T *CPI+ FKE VL YF G++ *SML F +Q+P +IP KT R
Sbjct: 275 NLNWLRDLGWGSTAY*CPIHAFKEGVLLYFSGASFGC*SMLWFFYKQTPYEIPSCKTDNR 454
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMG 697
*FWE L+N +EQC + R+ E E + I + +K PPV STSM L + RCQ+L+G
Sbjct: 455 *FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTLDDLRCQILVG 634
Query: 698 ANKRHRPCICRLCNKLRKWSDLI 766
+NKRH PCIC LC +L W+DLI
Sbjct: 635 SNKRH*PCICWLCYELG*WTDLI 703
Score = 147 bits (315), Expect = 1e-034
Identities = 67/142 (47%), Positives = 92/142 (64%)
Frame = -2 / -3
Query: 764 SGQTTS*ACCRADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTI 585
S Q+ + A RA+RCKV VFCW+P V GT*+++G +WKCC LVD W+ +* +R++++
Sbjct: 701 SSQSITRAHSRANRCKVNVFCWNPRVFGT*DHQG*RSWKCC*LVDFWNFSI*TLIRENSL 522
Query: 584 QRFWE*GDIVQRSWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL 405
Q W+ IVQ W +PRIT +FC GS+ G A + T+A IS+ H NK P+L
Sbjct: 521 QGIWKPSHIVQCCWPASSIPRITGCQFCS*GSHKGFACKRTTA*ISIQTRRH*NKATPLL 342
Query: 404 *RC*LGINQVCHST*YPQAS*D 339
*R LGIN +C+ T P AS*D
Sbjct: 341 *RRELGINTLCYPTRDP*AS*D 276
Score = 111 bits (236), Expect = 9e-024
Identities = 66/153 (43%), Positives = 84/153 (54%)
Frame = -1 / -2
Query: 798 KKIKRQRQTWQIRSDHFLSLLQSRQMQGLCLLLAPMSTWHLKL*RARGMEVL*TGGHLAY 619
++I + +I+S H+ S QS+QMQG CLLL P S WHL+ R + MEVL TGG L +
Sbjct: 735 RRIGNPKMN*EIKSVHYPSS*QSQQMQGQCLLLEPTSIWHLRSSRVKVMEVLLTGGLLEF 556
Query: 618 SCMSFSSARHHSKVLGIGRHCST*LDNP*GSQNHXXXXXXXXXXLGDCSSRNLSID*RIS 439
M+ S + S+ L HCS L + SQNH G C +N SID* +
Sbjct: 555 FYMNSYSGKLPSRDLETEPHCSMLLASLFDSQNHRLSVLQLGIS*GVCL*KNHSID*HPN 376
Query: 438 VEPQK*NSTRSLKVLIGH*SGVPLHLISPSQLR 340
P K*++T SLK IGH* V H S SQLR
Sbjct: 375 EAPLK*SNTPSLKA*IGH*YAVLPHPRSLSQLR 277
>gb|CV261322.1|CV261322 WS02016.B21_H12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02016_H12 3', mRNA sequence
Length = 844
Score = 314 bits (681), Expect(3) = 4e-095
Identities = 128/138 (92%), Positives = 131/138 (94%)
Frame = -3 / -3
Query: 727 TDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV 548
TDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA LFNV
Sbjct: 695 TDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAPLFNV 516
Query: 547 VGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCAT 368
VGQP RFPESPVVSFAARDLIRGLL+KEPQHRLA KRGATEIKQHPFFEGVNWALIRCAT
Sbjct: 515 VGQPFRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCAT 336
Query: 367 PPDIPKPVEIPRSVASSS 314
PP+IPKPVEI R A +S
Sbjct: 335 PPEIPKPVEIERIPAPAS 282
Score = 237 bits (512), Expect(2) = 5e-065
Identities = 100/128 (78%), Positives = 106/128 (82%)
Frame = +3 / +1
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R ISTGLGISGGVA INAQ TPSK GCCFISVAPRL AN C GS S PL+RSLAAKLT
Sbjct: 301 RSISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 480
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYS 692
TGDSGN KG PTTLNN A FP+PL GV P +SSY+ +P VHQSTALP PSP +ISGAKYS
Sbjct: 481 TGDSGNRKGWPTTLNNGARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYS 660
Query: 693 WVPTKDID 716
WVPTKDID
Sbjct: 661 WVPTKDID 684
Score = 141 bits (303), Expect = 5e-033
Identities = 64/130 (49%), Positives = 83/130 (63%)
Frame = +2 / +3
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LNWL D+RW T *CPI+ FKE VL YF ++ *SML F +Q+P +IP KT
Sbjct: 306 NLNWLRDLRWGSTAY*CPIHAFKEGVLLYFSCASFGC*SMLWFFYKQTPYEIPSCKTDNW 485
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMG 697
*FWE L+N +EQ + R+ E E + I + +K PPV STSM L + RCQ+L+G
Sbjct: 486 *FWESKRLANNIEQWGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTLDDLRCQILVG 665
Query: 698 ANKRHRPCIC 727
+NKRH PCIC
Sbjct: 666 SNKRH*PCIC 695
Score = 140 bits (301), Expect(2) = 3e-033
Identities = 62/129 (48%), Positives = 85/129 (65%)
Frame = -2 / -2
Query: 725 RCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQRFWE*GDIVQRS 546
RCKV VFCW+P V GT*+++G +WKCC LVD W+ +* +R++++Q W+ IVQ
Sbjct: 693 RCKVNVFCWNPRVFGT*DHQG*RSWKCC*LVDFWNFSI*TLIRENSLQGIWKPSPIVQCC 514
Query: 545 WTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LGINQVCHS 366
W +PRIT +FC GS+ G A + T+A IS+ + NK P+L*R LGIN +C+
Sbjct: 513 WPAFSIPRITSCQFCS*GSHKGFACKRTTA*ISIQTRRN*NKATPLL*RRELGINTLCYP 334
Query: 365 T*YPQAS*D 339
T* P AS*D
Sbjct: 333 T*DP*AS*D 307
Score = 41.4 bits (84), Expect(3) = 4e-095
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 880 EPACMQPSCVTTTTCFSPRFF 818
EP+C+QPSCV TT F PR F
Sbjct: 843 EPSCIQPSCVAPTTSFGPRLF 781
Score = 32.2 bits (64), Expect(3) = 4e-095
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 772 LANQVRPLPELVAEP 728
L NQV PLPEL+AEP
Sbjct: 741 LGNQVSPLPELIAEP 697
Score = 31.3 bits (62), Expect(2) = 5e-065
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3 / +2
Query: 807 DLEEKKRGEKHVVVVTQEGCIQAGS 881
D+ EK+RG K VV TQ+G + GS
Sbjct: 770 DMLEKRRGPKDVVGATQDGWMHEGS 844
Score = 24.4 bits (47), Expect(2) = 3e-033
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -3 / -2
Query: 895 QPVCIEPACMQPS 857
+P CI+P+C+ P+
Sbjct: 843 EPSCIQPSCVAPT 805
>gb|DT482867.1|DT482867 WS02521.B21_A02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_A02 3', mRNA sequence
Length = 749
Score = 344 bits (745), Expect = 6e-094
Identities = 141/159 (88%), Positives = 146/159 (91%)
Frame = -3 / -1
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
L NQV PL EL+AEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK
Sbjct: 692 LGNQVSPLLELMAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 513
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGNRATLFNVVGQPLRFPESPVVSFA RDLIRGLL+KEPQHRLAYKRGATEIKQH
Sbjct: 512 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAPRDLIRGLLVKEPQHRLAYKRGATEIKQH 333
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSA 296
PFFEGVNWALIRCATPP+IPKPVEI R +S +A
Sbjct: 332 PFFEGVNWALIRCATPPEIPKPVEIERIPGPASTSEKAA 216
Score = 236 bits (509), Expect = 2e-061
Identities = 98/126 (77%), Positives = 104/126 (82%)
Frame = +3 / +1
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
ISTG GISGGVA INAQ TPSK GCC ISVAPRLYAN C GS S PLIRSL AKLTTG
Sbjct: 259 ISTGFGISGGVAQRINAQFTPSKKGCCLISVAPRLYANLCCGSFTSKPLIRSLGAKLTTG 438
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
DSGN +G PTTLNNVA FPEPL GVLP +SSY+ +P VHQSTALP PSP +ISGA+YSWV
Sbjct: 439 DSGNRRGWPTTLNNVARFPEPLKGVLPNKSSYRKIPKVHQSTALP*PSPLMISGARYSWV 618
Query: 699 PTKDID 716
PT DID
Sbjct: 619 PTNDID 636
Score = 151 bits (324), Expect = 7e-036
Identities = 68/143 (47%), Positives = 92/143 (64%)
Frame = +2 / +3
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LNWL D+ W T *CPI+TFKE +L F + + SMLRF +Q+P KIP KT+
Sbjct: 258 NLNWLWDLGWGSTAY*CPIHTFKEGMLLNFSCPSFVCQSMLRFFYKQTPYKIPWCKTNNW 437
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMG 697
*FWE L+N +EQC I RT + + +LI + K PP+ STSM L + R Q+L+G
Sbjct: 438 *FWESKRLANNIEQCGSISRTLKGSFTK*ELI*KDPKSPPINSTSMTFTLDDLRSQILVG 617
Query: 698 ANKRHRPCICRLCNKLRKWSDLI 766
NKRH PCI LC++L+ W++LI
Sbjct: 618 PNKRH*PCISWLCHELK*WTNLI 686
Score = 125 bits (268), Expect = 4e-028
Identities = 59/132 (44%), Positives = 81/132 (61%)
Frame = -2 / -3
Query: 734 RADRCKVYVFCWHP*VLGT*NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQRFWE*GDIV 555
RA+ CKV V CW P V G+*+++G +WKCC LVD W + +*A + +++ FW+ IV
Sbjct: 654 RAN*CKVNVVCWDPRVSGS*DHQG*RSWKCC*LVDFWDLSI*ALIW*NSL*GFWKSSHIV 475
Query: 554 QRSWTTLKVPRITCSEFCCKGSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LGINQV 375
Q W +PRIT FC KGSY G A + T+ I + + N +L*RC LGIN +
Sbjct: 474 QCCWPASSIPRITSC*FCTKGSYKGFACKRTAT*IGIQTRGN*N*ATSLL*RCELGINTL 295
Query: 374 CHST*YPQAS*D 339
C+ T P+AS*D
Sbjct: 294 CYPTRDPKAS*D 259
>gb|DN494990.1|DN494990 N009H07.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N009H07 5', mRNA sequence
Length = 760
Score = 304 bits (658), Expect(2) = 2e-084
Identities = 119/137 (86%), Positives = 130/137 (94%)
Frame = -3 / +1
Query: 751 LPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSG 572
LPELVAEPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+ELL+GKTPFKGSG
Sbjct: 241 LPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 420
Query: 571 NRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVN 392
NRATLFNVVGQ LRFP+SP ++A++DLIRGLL+KEPQHRL KRGATEIKQHPFFE VN
Sbjct: 421 NRATLFNVVGQQLRFPDSPATAYASQDLIRGLLVKEPQHRLGVKRGATEIKQHPFFESVN 600
Query: 391 WALIRCATPPDIPKPVE 341
WALIRC+TPP++PKPVE
Sbjct: 601 WALIRCSTPPEVPKPVE 651
Score = 207 bits (446), Expect = 1e-052
Identities = 89/129 (68%), Positives = 95/129 (73%)
Frame = +3 / -3
Query: 330 ERGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKL 509
E +STG G SGGV HLI AQ T SK GCC ISVAP + C*GSL S P I+S A
Sbjct: 662 EGSVSTGFGTSGGVLHLIRAQFTLSKKGCCLISVAPLFTPSLC*GSLTSKPRIKSWLA*A 483
Query: 510 TTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKY 689
G+SGNL CPTTLN VA FPEPLNGVLP SS K +PNVHQSTALP PSP IISGA+Y
Sbjct: 482 VAGESGNLSCCPTTLNKVARFPEPLNGVLPYNSSCKKIPNVHQSTALPWPSPLIISGARY 303
Query: 690 SWVPTKDID 716
SWVPTKDID
Sbjct: 302 SWVPTKDID 276
Score = 129 bits (277), Expect = 2e-029
Identities = 61/143 (42%), Positives = 86/143 (60%)
Frame = +2 / -2
Query: 323 SYRTRDLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCS 502
++R L+WL RW TP+* PI+TFKER+L F + L * +LRFLD+Q+ ++I S
Sbjct: 669 AWRGLGLHWLWHFRWCATPN*SPIHTFKERMLLDFSRTPLHP*PVLRFLDQQASDQILAS 490
Query: 503 KTHYR*FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRC 682
+ * WE L +++EQ + FEW L+QE KCPP+ T+M +L NFR
Sbjct: 489 ISSSW*IWESKLLPHHIEQGSSVS*AFEWSFTI**LVQENTKCPPINCTAMAFSLDNFRG 310
Query: 683 QVLMGANKRHRPCICRLCNKLRK 751
QV MG++K H P C C++L K
Sbjct: 309 QVFMGSHKGH*PSSCWFCHELWK 241
Score = 29.5 bits (58), Expect(2) = 2e-084
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 907 AYCVQPVCIEPA 872
A+CVQP CIEP+
Sbjct: 100 AFCVQPACIEPS 135
>gb|CK098382.1|CK098382 A012P77.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A012P77 5', mRNA sequence
Length = 614
Score = 262 bits (566), Expect(3) = 1e-082
Identities = 101/111 (90%), Positives = 108/111 (97%)
Frame = -3 / +2
Query: 706 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 527
F G+HEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG+GNRATLFNVVGQPLRF
Sbjct: 164 FCGSHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 343
Query: 526 PESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRC 374
PESP VSFAA+DLIRGLL+KEPQHRLAY+RGATEIKQHPFF+ +NWALIRC
Sbjct: 344 PESPTVSFAAKDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSINWALIRC 496
Score = 182 bits (391), Expect = 4e-045
Identities = 79/112 (70%), Positives = 88/112 (78%)
Frame = +3 / -3
Query: 381 INAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLKGCPTTLNN 560
++AQL KNGCCFISVAPRL A RC GS S PLI+S AAKLT GDSGNL G PTTLN+
Sbjct: 489 MSAQLML*KNGCCFISVAPRL*ARRCCGSFTSKPLIKSFAAKLTVGDSGNLNGWPTTLNS 310
Query: 561 VALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKDID 716
VA FP PL GVLP +SS +N+PNVHQSTALP PSP IISGAKYS P K ++
Sbjct: 309 VARFPAPLKGVLPNKSS*RNIPNVHQSTALPWPSPLIISGAKYSCDPQKTLN 154
Score = 118 bits (253), Expect = 4e-026
Identities = 52/111 (46%), Positives = 72/111 (64%)
Frame = +2 / -2
Query: 374 TPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYV 553
T + CPI+ KE +LFYF GS + +MLR L E + +++ C K H R*FW+ * L+N++
Sbjct: 496 TANECPIDALKEWMLFYFSGSPSVSKTMLRLLHE*TSDQVLCCKAHSR*FWKS*WLANHI 317
Query: 554 EQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQVLMGANK 706
+ C I + E ++KLI++Y KCPP+YSTSM LA FR QVLM K
Sbjct: 316 K*CSSISCSLERSFTKQKLIEKYPKCPPIYSTSMALAFNYFRGQVLMRPTK 164
Score = 61.6 bits (128), Expect(3) = 1e-082
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = -3 / +3
Query: 838 CFSPRFFXXXXXXXXXXXXXXDLANQVRPLPELVAEPTDARSMSFVG 698
CF PRFF ++ +QV PLPEL+AEPT+ARSMSFVG
Sbjct: 33 CFGPRFFSTKVKKGKKSKSKNEMNHQVNPLPELIAEPTNARSMSFVG 173
Score = 22.6 bits (43), Expect(3) = 1e-082
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3 / +3
Query: 367 PPDIPKPVEIPRSVASSSQKATSAAEKG 284
PP++PK + + + S KA + E G
Sbjct: 504 PPEVPKQAILEFLMRADSPKAPTRCECG 587
>gb|DT507221.1|DT507221 WS02417.BR_K22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K22 5', mRNA sequence
Length = 644
Score = 278 bits (602), Expect = 3e-074
Identities = 113/121 (93%), Positives = 116/121 (95%)
Frame = -3 / +1
Query: 676 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA 497
EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA
Sbjct: 19 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA 198
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEIPRSVASS 317
RDLIRGLL+KEPQHRLA KRGATEIKQHPFFEGVNWALIRCATPP+IPKPVEI R A +
Sbjct: 199 RDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIERIPAPA 378
Query: 316 S 314
S
Sbjct: 379 S 381
Score = 206 bits (444), Expect = 2e-052
Identities = 87/118 (73%), Positives = 95/118 (80%)
Frame = +3 / -1
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R ISTGLGISGGVA INAQ TPSK GCCFISVAPRL AN C GS S PL+RSLAAKLT
Sbjct: 362 RSISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 183
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAK 686
TGDSGN +G PTTLNNVA FP+PL GV P +SSY+ +P VHQSTALP PSP +IS +
Sbjct: 182 TGDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISSCR 9
Score = 110 bits (234), Expect = 2e-023
Identities = 52/110 (47%), Positives = 67/110 (60%)
Frame = +2 / -3
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LNWL D+ W T *CPI+ FKE VL YF G++ *SML F +Q+P +IP KT
Sbjct: 357 NLNWLRDLGWGSTAY*CPIHAFKEGVLLYFSGASFGC*SMLWFFYKQTPYEIPSCKTDDW 178
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLAL 667
*FWE L+N +EQC + R+ E E + I + +K PPV STSM L
Sbjct: 177 *FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTL 28
Score = 108 bits (230), Expect = 6e-023
Identities = 49/112 (43%), Positives = 70/112 (62%)
Frame = -2 / +3
Query: 674 NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQRFWE*GDIVQRSWTTLKVPRITCSEFCCK 495
+++G +WKCC LVD W+ +* +R++++Q W+ IVQ W +PRIT +FC
Sbjct: 21 DHQG*RSWKCC*LVDFWNFSI*TLIRENSLQGIWKPSHIVQCCWPASSIPRITSRQFCS* 200
Query: 494 GSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LGINQVCHST*YPQAS*D 339
GS+ G A + T+A IS+ H NK P+L*R LGIN +C+ T P AS*D
Sbjct: 201 GSHKGFACKRTTA*ISIQTRRH*NKATPLL*RRELGINTLCYPTRDP*AS*D 356
>gb|DT511863.1|DT511863 WS02417.B21_K22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K22 3', mRNA sequence
Length = 644
Score = 278 bits (602), Expect = 3e-074
Identities = 113/121 (93%), Positives = 116/121 (95%)
Frame = -3 / -1
Query: 676 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA 497
EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA
Sbjct: 626 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA 447
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVEIPRSVASS 317
RDLIRGLL+KEPQHRLA KRGATEIKQHPFFEGVNWALIRCATPP+IPKPVEI R A +
Sbjct: 446 RDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIERIPAPA 267
Query: 316 S 314
S
Sbjct: 266 S 264
Score = 206 bits (444), Expect = 2e-052
Identities = 87/118 (73%), Positives = 95/118 (80%)
Frame = +3 / +1
Query: 333 RGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLT 512
R ISTGLGISGGVA INAQ TPSK GCCFISVAPRL AN C GS S PL+RSLAAKLT
Sbjct: 283 RSISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLT 462
Query: 513 TGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAK 686
TGDSGN +G PTTLNNVA FP+PL GV P +SSY+ +P VHQSTALP PSP +IS +
Sbjct: 463 TGDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISSCR 636
Score = 110 bits (234), Expect = 2e-023
Identities = 52/110 (47%), Positives = 67/110 (60%)
Frame = +2 / +3
Query: 338 DLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKTHYR 517
+LNWL D+ W T *CPI+ FKE VL YF G++ *SML F +Q+P +IP KT
Sbjct: 288 NLNWLRDLGWGSTAY*CPIHAFKEGVLLYFSGASFGC*SMLWFFYKQTPYEIPSCKTDDW 467
Query: 518 *FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLAL 667
*FWE L+N +EQC + R+ E E + I + +K PPV STSM L
Sbjct: 468 *FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTL 617
Score = 108 bits (230), Expect = 6e-023
Identities = 49/112 (43%), Positives = 70/112 (62%)
Frame = -2 / -3
Query: 674 NYKGRGAWKCCRLVDIWHILV*ASLRQDTIQRFWE*GDIVQRSWTTLKVPRITCSEFCCK 495
+++G +WKCC LVD W+ +* +R++++Q W+ IVQ W +PRIT +FC
Sbjct: 624 DHQG*RSWKCC*LVDFWNFSI*TLIRENSLQGIWKPSHIVQCCWPASSIPRITSRQFCS* 445
Query: 494 GSY*GIAHQGTSASISV*AWSHRNKTAPVL*RC*LGINQVCHST*YPQAS*D 339
GS+ G A + T+A IS+ H NK P+L*R LGIN +C+ T P AS*D
Sbjct: 444 GSHKGFACKRTTA*ISIQTRRH*NKATPLL*RRELGINTLCYPTRDP*AS*D 289
>gb|DT476893.1|DT476893 WS01231.B21_D17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_D17 3', mRNA sequence
Length = 992
Score = 273 bits (590), Expect(2) = 1e-073
Identities = 111/162 (68%), Positives = 129/162 (79%)
Frame = -3 / -3
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
LA QV PLP++V EPT ARS SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+ELL+G+
Sbjct: 699 LAAQVSPLPQVVVEPTSARSNSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGR 520
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGN TL NVV + L+FP +P+VSF ARDLIRGLLIKEP RL +GA EIKQH
Sbjct: 519 TPFKGSGNEETLSNVVSRSLKFPSNPIVSFHARDLIRGLLIKEPGDRLGSAKGAAEIKQH 340
Query: 412 PFFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKATSAAEK 287
PFF+G+NWALIRCA PP++P ++ + + SQ A K
Sbjct: 339 PFFDGLNWALIRCAIPPELPNQCDVGIASNTFSQNKDCAKFK 214
Score = 183 bits (395), Expect = 1e-045
Identities = 77/122 (63%), Positives = 93/122 (76%)
Frame = +3 / +2
Query: 351 LGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGN 530
LG SGG+AH I AQL PSK GCC IS AP +R GS ++NPLI+S A KLT G GN
Sbjct: 278 LGSSGGIAHRIRAQLRPSKKGCCLISAAPLADPSRSPGSFINNPLIKSRA*KLTIGLLGN 457
Query: 531 LKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKD 710
L+ TTL+NV+ FP+PL GVLP SS + +PNVHQSTALPCPSP +ISGA+YSWVPTK+
Sbjct: 458 LRLRDTTLDNVSSFPDPLKGVLPYNSSNRKIPNVHQSTALPCPSPLMISGARYSWVPTKE 637
Query: 711 ID 716
++
Sbjct: 638 LE 643
Score = 24.4 bits (47), Expect(2) = 1e-073
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -3 / -3
Query: 931 EDNQKGNPAYCVQPVCIEPACMQPS 857
E+ K + C + CI+P C+ P+
Sbjct: 843 EEPTKKMSSPCSEASCIDPFCLHPA 769
>gb|BU836496.1|BU836496 T087C12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 724
Score = 263 bits (569), Expect(2) = 4e-073
Identities = 105/134 (78%), Positives = 119/134 (88%)
Frame = -3 / +1
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+A QVR LP+LVAEPTDAR SFVGTHEYLAPEIIKGEGHG+AVDWWTFG+FLYELL+G
Sbjct: 322 VAAQVRSLPQLVAEPTDARPNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGI 501
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQH 413
TPFKGSGN TL NVV + L+FP+SP+VSF ARDLIR LL+KEP++RL +GATEIKQH
Sbjct: 502 TPFKGSGNEETLANVVSESLKFPDSPLVSFQARDLIRELLVKEPENRLGTHKGATEIKQH 681
Query: 412 PFFEGVNWALIRCA 371
PFFEG+NWALIRCA
Sbjct: 682 PFFEGLNWALIRCA 723
Score = 155 bits (334), Expect = 3e-037
Identities = 70/113 (61%), Positives = 82/113 (72%)
Frame = +3 / -3
Query: 372 AHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLKGCPTT 551
A ++AQ PSK GCC ISVAP + GSL S+ LIRSLA KLT+G SGNL+ TT
Sbjct: 722 AQRMSAQFKPSKKGCCLISVAPLCVPSLFSGSLTSSSLIRSLA*KLTSGLSGNLRLSDTT 543
Query: 552 LNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTKD 710
L +V+ FPEPL GV+P RSS + P VHQSTA P PSP IISGA+YSWVPTK+
Sbjct: 542 LASVSSFPEPLKGVMPYRSS*RKTPKVHQSTAAPWPSPLIISGARYSWVPTKE 384
Score = 32.2 bits (64), Expect(2) = 4e-073
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +1
Query: 901 CVQPVCIEPACMQPSC 854
C + CIEP C++PSC
Sbjct: 208 CTESSCIEPLCIEPSC 255
>gb|CN523462.1|CN523462 GQ015M10.T3_B08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M10_B08 5', mRNA sequence
Length = 732
Score = 267 bits (577), Expect = 9e-071
Identities = 105/133 (78%), Positives = 115/133 (86%)
Frame = -3 / +2
Query: 703 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFP 524
VGTHEY A EIIKGEGHGSAVDWWTFGI ELLFGKTPFKG+GNRATLFNVVGQPLRFP
Sbjct: 20 VGTHEYXAXEIIKGEGHGSAVDWWTFGIXXXELLFGKTPFKGAGNRATLFNVVGQPLRFP 199
Query: 523 ESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPV 344
ESP VSFAARDLIRGLL+KEPQHRLAY+RGATEIKQHPFF+ +NWALIRC PP++PK
Sbjct: 200 ESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSINWALIRCTNPPEVPKQA 379
Query: 343 EIPRSVASSSQKA 305
+ + + S KA
Sbjct: 380 IMEXXMRADSPKA 418
Score = 186 bits (401), Expect = 2e-046
Identities = 86/136 (63%), Positives = 92/136 (67%)
Frame = +3 / -1
Query: 306 AFWLDEATERGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPL 485
AF I G SGG ++AQL KNGCCFISVAPRL A RC GS S PL
Sbjct: 417 AFGESALIXNSIIACFGTSGGFVQRMSAQLML*KNGCCFISVAPRL*ARRCCGSFTSKPL 238
Query: 486 IRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSP 665
I+SLAAKLT GDSGNL G PTTLN+VA FP PL GVLP +SS +PNVHQSTALP PSP
Sbjct: 237 IKSLAAKLTVGDSGNLNGWPTTLNSVARFPAPLKGVLPNKSSXXXIPNVHQSTALPWPSP 58
Query: 666 FIISGAKYSWVPTKDI 713
IIS A YS VPT I
Sbjct: 57 LIISXAXYSCVPTXXI 10
>gb|CA931263.1|CA931263 MTU2TA.P4.H08 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 491
Score = 261 bits (565), Expect = 4e-069
Identities = 101/118 (85%), Positives = 111/118 (94%)
Frame = -3 / +1
Query: 694 HEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESP 515
HEYLAPEIIKGEGHGSAVDWWTFGIFL+ELL+GKTPFKGSGNRATLFNVVGQ LRFP+SP
Sbjct: 1 HEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPDSP 180
Query: 514 VVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVE 341
S+A+RDLIRGLL+KEPQ RL KRGATEI QHPFFEGVNWALIRC+TPP++P+PVE
Sbjct: 181 ATSYASRDLIRGLLVKEPQQRLGVKRGATEI*QHPFFEGVNWALIRCSTPPEVPRPVE 354
Score = 196 bits (423), Expect = 2e-049
Identities = 84/118 (71%), Positives = 89/118 (75%)
Frame = +3 / -1
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+STGLG SGGV HLI AQ TPSK GCC ISVAP N C*GS S P I+S A L G
Sbjct: 356 VSTGLGTSGGVLHLIRAQFTPSKKGCC*ISVAPLFTPNLC*GSFTSKPRIKSRLA*LVAG 177
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYS 692
+SGNL CPTTLN VA FPEPLNGVLP SS K MPNVHQSTALPCPSP +ISGA+YS
Sbjct: 176 ESGNLSCCPTTLNRVARFPEPLNGVLPYNSSCKKMPNVHQSTALPCPSPLMISGARYS 3
Score = 102 bits (217), Expect = 4e-021
Identities = 51/122 (41%), Positives = 70/122 (57%)
Frame = +2 / -3
Query: 329 RTRDLNWLGDIRWSGTPD*CPINTFKERVLFYFCGSTLIR*SMLRFLDEQSPNKIPCSKT 508
R +W RW TP+* PI+TFKERVL + L * +LRFL + + ++I S T
Sbjct: 366 RRLSFHWSWHFRWRATPN*SPIHTFKERVLLDLSCTPLHP*PLLRFLHQ*ASDQISTSIT 187
Query: 509 HYR*FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKCPPVYSTSMPLALYNFRCQV 688
* WE L +++EQ + T EW + L+QE AKCPP+ T+MP +L +FR QV
Sbjct: 186 SCW*VWESKLLPDHIEQGSSVS*TLEWGFTIQ*LMQENAKCPPINCTAMPFSLDDFRGQV 7
Query: 689 LM 694
M
Sbjct: 6 FM 1
>gb|AI162152.1|AI162152 A012P77U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 481
Score = 259 bits (560), Expect = 2e-068
Identities = 105/136 (77%), Positives = 116/136 (85%)
Frame = -3 / +2
Query: 838 CFSPRFFXXXXXXXXXXXXXXDLANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGE 659
CF PRFF ++ +QV PLPEL+AEPT+ARSMSFVGTHEYLAPEIIKGE
Sbjct: 11 CFGPRFFSTXVKKGKKSKSKNEMNHQVNPLPELIAEPTNARSMSFVGTHEYLAPEIIKGE 190
Query: 658 GHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRG 479
GHGSAVDWWTFGIFLYELLFGKTPFKG+GNRATLFNVVGQPLRFPESP VSFAA+DL +
Sbjct: 191 GHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPESPTVSFAAKDLDQR 370
Query: 478 LLIKEPQHRLAYKRGA 431
LL+KEPQHRLAY+ G+
Sbjct: 371 LLVKEPQHRLAYRXGS 418
Score = 152 bits (326), Expect = 4e-036
Identities = 67/94 (71%), Positives = 73/94 (77%)
Frame = +3 / -2
Query: 435 PRLYANRC*GSLMSNPLIRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSY 614
P L A RC GS SN +S AAKLT GDSGNL G PTTLN+VA FP PL GVLP +SS
Sbjct: 414 PXL*ARRCCGSFTSNL*SKSFAAKLTVGDSGNLNGWPTTLNSVARFPAPLKGVLPNKSS* 235
Query: 615 KNMPNVHQSTALPCPSPFIISGAKYSWVPTKDID 716
+N+PNVHQSTALP PSP IISGAKYS VPTKDI+
Sbjct: 234 RNIPNVHQSTALPWPSPLIISGAKYSCVPTKDIE 133
Score = 104 bits (222), Expect = 8e-022
Identities = 47/100 (47%), Positives = 64/100 (64%)
Frame = +2 / -1
Query: 452 SMLRFLDEQSPNKIPCSKTHYR*FWEP*GLSNYVEQCRPIPRTFEWCLAEEKLIQEYAKC 631
+MLR L E ++ C K H R*FW+ * L+N+++ C I + E ++KLI++Y KC
Sbjct: 397 TMLRLLHE*PLIQVLCCKAHSR*FWKS*WLANHIK*CSSISCSLERSFTKQKLIEKYPKC 218
Query: 632 PPVYSTSMPLALYNFRCQVLMGANKRHRPCICRLCNKLRK 751
PP+YSTSM LA FR QVLM +KRH IC N+LR+
Sbjct: 217 PPIYSTSMALAFNYFRGQVLMRTHKRH*TSICGFGNELRQ 98
>gb|DN499789.1|DN499789 T087C12.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T087C12 5', mRNA sequence
Length = 852
Score = 194 bits (418), Expect(3) = 2e-066
Identities = 78/98 (79%), Positives = 87/98 (88%)
Frame = -3 / +3
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
+A QVR LP+LVAEPTDAR SFVGTHEYLAPEIIKGEGHG+AVDWWTFG+FLYELL+G
Sbjct: 321 VAAQVRSLPQLVAEPTDARPNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGI 500
Query: 592 TPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRG 479
TPFKGSGN TL NVV + L+FP+SP+VSF ARDLIRG
Sbjct: 501 TPFKGSGNEETLANVVSESLKFPDSPLVSFQARDLIRG 614
Score = 122 bits (261), Expect(2) = 9e-035
Identities = 53/77 (68%), Positives = 61/77 (79%)
Frame = +3 / -3
Query: 480 PLIRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCP 659
PLIRSLA KLT+G SGNL+ TTL +V+ FPEPL GV+P RSS + P VHQSTA P P
Sbjct: 613 PLIRSLA*KLTSGLSGNLRLSDTTLASVSSFPEPLKGVMPYRSS*RKTPKVHQSTAAPWP 434
Query: 660 SPFIISGAKYSWVPTKD 710
SP IISGA+YSWVPTK+
Sbjct: 433 SPLIISGARYSWVPTKE 383
Score = 65.7 bits (137), Expect(3) = 2e-066
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = -3 / +2
Query: 439 RGATEIKQHPFFEGVNWALIRCATPPD 359
+GATEIKQHPFFEG+NWALIRCA PP+
Sbjct: 656 KGATEIKQHPFFEGLNWALIRCAIPPE 736
Score = 45.1 bits (92), Expect(2) = 9e-035
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3 / -1
Query: 360 SGGVAHLINAQLTPSKNGCCFISVAP 437
SGG+A ++AQ PSK GCC ISVAP
Sbjct: 735 SGGMAQRMSAQFKPSKKGCCLISVAP 658
Score = 32.2 bits (64), Expect(3) = 2e-066
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / +3
Query: 901 CVQPVCIEPACMQPSC 854
C + CIEP C++PSC
Sbjct: 207 CTESSCIEPLCIEPSC 254
>gb|CV261185.1|CV261185 WS02016.B21_B13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02016_B13 3', mRNA sequence
Length = 592
Score = 219 bits (473), Expect = 2e-056
Identities = 82/134 (61%), Positives = 100/134 (74%)
Frame = -3 / -2
Query: 748 PELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGN 569
PE VAEP D RSMSFVGTHEYLAPEI+ GEGHGS VDWWT GIF++EL +G TPF+G +
Sbjct: 513 PEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFMFELFYGVTPFRGVDH 334
Query: 568 RATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNW 389
TL N+V + L FP+ PVV A+DLI LL+K+P R+ GA+ +K HPFF+GVNW
Sbjct: 333 ELTLANIVARALEFPKEPVVPATAKDLISQLLVKDPARRMGSTMGASAVKHHPFFQGVNW 154
Query: 388 ALIRCATPPDIPKP 347
AL+RC PP +P P
Sbjct: 153 ALLRCTPPPYVPPP 112
Score = 133 bits (284), Expect = 2e-030
Identities = 65/126 (51%), Positives = 74/126 (58%)
Frame = +3 / +2
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+ G G GG H NAQLTP K G C + AP + R GSL S+ IRS A TTG
Sbjct: 104 VLNGGGTYGGGVHRNNAQLTPWKKGWCLTADAPMVEPIRLAGSLTSSCEIRSFAVAGTTG 283
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
GN T L V+ + PL GV P SS N+P+VHQST LP PSP ISGAKYSWV
Sbjct: 284 SLGNSSARATILARVSSWSTPLKGVTP*NSSNMNIPSVHQSTGLPWPSPDTISGAKYSWV 463
Query: 699 PTKDID 716
PT D+D
Sbjct: 464 PTNDMD 481
>gb|CV241963.1|CV241963 WS02513.B21_M01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02513_M01 3', mRNA sequence
Length = 754
Score = 219 bits (472), Expect = 3e-056
Identities = 81/134 (60%), Positives = 100/134 (74%)
Frame = -3 / -3
Query: 748 PELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGN 569
PE VAEP D RSMSF+GTHEYLAPEI+ GEGHGS VDWWT GIF++EL +G TPF+G +
Sbjct: 527 PEFVAEPVDVRSMSFIGTHEYLAPEIVSGEGHGSPVDWWTLGIFMFELFYGVTPFRGVDH 348
Query: 568 RATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNW 389
TL N+V + L FP+ PVV A+DLI LL+K+P R+ GA+ +K HPFF+GVNW
Sbjct: 347 ELTLANIVARALEFPKEPVVPATAKDLISQLLVKDPARRMGSTMGASAVKHHPFFQGVNW 168
Query: 388 ALIRCATPPDIPKP 347
AL+RC PP +P P
Sbjct: 167 ALLRCTPPPYVPPP 126
Score = 131 bits (281), Expect = 6e-030
Identities = 65/126 (51%), Positives = 73/126 (57%)
Frame = +3 / +1
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTG 518
+ G G GG H NAQLTP K G C + AP + R GSL S+ IRS A TTG
Sbjct: 118 VLNGGGTYGGGVHRNNAQLTPWKKGWCLTADAPMVEPIRLAGSLTSSCEIRSFAVAGTTG 297
Query: 519 DSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWV 698
GN T L V+ + PL GV P SS N+P+VHQST LP PSP ISGAKYSWV
Sbjct: 298 SLGNSSARATILARVSSWSTPLKGVTP*NSSNMNIPSVHQSTGLPWPSPDTISGAKYSWV 477
Query: 699 PTKDID 716
P DID
Sbjct: 478 PINDID 495
>gb|CF228348.1|CF228348 PtaXM0011H7H0715 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 645
Score = 218 bits (471), Expect = 4e-056
Identities = 83/134 (61%), Positives = 102/134 (76%)
Frame = -3 / +1
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
++VAEP D RSMSFVGTHEYLAPEI+ GEGHG+AVDWWT GIF++E+ +G TPFKG +
Sbjct: 181 KIVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGNAVDWWTLGIFMFEMFYGVTPFKGMDHE 360
Query: 565 ATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWA 386
TL N+V + L FP+ P + A+DLI LLIK+P RL GAT IK H FF+G+NWA
Sbjct: 361 LTLANIVARALEFPKEPSIPVLAKDLITQLLIKDPVRRLGSTMGATAIKHHQFFDGINWA 540
Query: 385 LIRCATPPDIPKPV 344
L+RC TPP IP+PV
Sbjct: 541 LLRCRTPPYIPRPV 582
Score = 143 bits (306), Expect = 2e-033
Identities = 67/124 (54%), Positives = 78/124 (62%)
Frame = +3 / -2
Query: 345 TGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDS 524
TG GI GGV HL +AQ PSKN C ++VAP + +R GSLM + +I+S A G
Sbjct: 581 TGRGI*GGVLHLSSAQFIPSKN*WCLMAVAPMVEPSRLTGSLMRSWVIKSFARTGIEGSL 402
Query: 525 GNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPT 704
GN + T V + PLNGV P S NMP VHQSTALPCPSP ISGAKYSWVPT
Sbjct: 401 GNSRARATMFARVNSWSIPLNGVTP*NISNMNMPKVHQSTALPCPSPDTISGAKYSWVPT 222
Query: 705 KDID 716
D+D
Sbjct: 221 NDMD 210
>gb|DN489293.1|DN489293 T021A10.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T021A10 3', mRNA sequence
Length = 695
Score = 146 bits (313), Expect(2) = 7e-049
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = -3 / -1
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
ELVAEP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT G+FLYE+L+G+TPFKG N
Sbjct: 524 ELVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPFKGENNE 345
Query: 565 ATLFNVVGQPLRFPESPVVS 506
TL N++ QPL FP V S
Sbjct: 344 KTLINILKQPLTFPRIGVNS 285
Score = 96.8 bits (205), Expect(2) = 9e-026
Identities = 45/77 (58%), Positives = 48/77 (62%)
Frame = +3 / +1
Query: 486 IRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSP 665
I S + L T G +KGC + L V PL GVLP SYKN P VHQSTALP P P
Sbjct: 265 ISSNSLLLFTPILGKVKGCLSMLIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCP 444
Query: 666 FIISGAKYSWVPTKDID 716
I SGAKYSWVPTKD D
Sbjct: 445 DITSGAKYSWVPTKDFD 495
Score = 68.4 bits (143), Expect(2) = 7e-049
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = -3 / -1
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIP 353
+DL+ LL+K P+ R+ +G+ EIK+H FF+GVNWALIR PP+ P
Sbjct: 254 QDLVGKLLVKNPKRRIGSLKGSVEIKRHEFFKGVNWALIRSIKPPESP 111
Score = 40.5 bits (82), Expect(2) = 9e-026
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3 / +1
Query: 339 ISTGLGISGGVAHLINAQLTPSKNGCCFISVAP 437
+ LG SGG+ LI AQ TP KN C IS P
Sbjct: 97 LQRSLGDSGGLIDLIKAQFTPLKNSCLLISTDP 195
>gb|BI137613.1|BI137613 F089P39Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 482
Score = 146 bits (313), Expect(2) = 7e-049
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = -3 / +1
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
ELVAEP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT G+FLYE+L+G+TPFKG N
Sbjct: 64 ELVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPFKGENNE 243
Query: 565 ATLFNVVGQPLRFPESPVVS 506
TL N++ QPL FP V S
Sbjct: 244 KTLINILKQPLTFPRIGVNS 303
Score = 96.8 bits (205), Expect(2) = 1e-025
Identities = 45/77 (58%), Positives = 48/77 (62%)
Frame = +3 / -1
Query: 486 IRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSP 665
I S + L T G +KGC + L V PL GVLP SYKN P VHQSTALP P P
Sbjct: 323 ISSNSLLLFTPILGKVKGCLSMLIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCP 144
Query: 666 FIISGAKYSWVPTKDID 716
I SGAKYSWVPTKD D
Sbjct: 143 DITSGAKYSWVPTKDFD 93
Score = 68.4 bits (143), Expect(2) = 7e-049
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = -3 / +1
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIP 353
+DL+ LL+K P+ R+ +G+ EIK+H FF+GVNWALIR PP+ P
Sbjct: 334 QDLVGKLLVKNPKRRIGSLKGSVEIKRHEFFKGVNWALIRSIKPPESP 477
Score = 40.0 bits (81), Expect(2) = 1e-025
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +3 / -1
Query: 351 LGISGGVAHLINAQLTPSKNGCCFISVAP 437
LG SGG+ LI AQ TP KN C IS P
Sbjct: 479 LGDSGGLIDLIKAQFTPLKNSCLLISTDP 393
>gb|BI135709.1|BI135709 F057P33Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 452
Score = 146 bits (313), Expect(2) = 1e-045
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = -3 / +1
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
ELVAEP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT G+FLYE+L+G+TPFKG N
Sbjct: 64 ELVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPFKGENNE 243
Query: 565 ATLFNVVGQPLRFPESPVVS 506
TL N++ QPL FP V S
Sbjct: 244 KTLINILKQPLTFPRIGVNS 303
Score = 57.9 bits (120), Expect(2) = 1e-045
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = -3 / +1
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALI 380
+DL+ LL+K P+ R+ +G+ EIK+H FF+GVNWALI
Sbjct: 334 QDLVGKLLVKNPKRRIGSLKGSVEIKRHEFFKGVNWALI 450
>gb|DT520021.1|DT520021 WS02446.B21.1_F15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02446_F15 3', mRNA sequence
Length = 911
Score = 182 bits (392), Expect = 3e-045
Identities = 71/95 (74%), Positives = 82/95 (86%)
Frame = -3 / -2
Query: 589 PFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHP 410
PFKG+GNRATL+NVVGQPLRFPESP VSFAARDLIRGLL+KEPQHRLAY+RGATEIKQHP
Sbjct: 910 PFKGAGNRATLYNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHP 731
Query: 409 FFEGVNWALIRCATPPDIPKPVEIPRSVASSSQKA 305
FF+ +NWALIRC PP++PK + + + S KA
Sbjct: 730 FFQSINWALIRCTNPPEVPKQAIMEFLMRADSPKA 626
Score = 122 bits (260), Expect = 5e-027
Identities = 57/95 (60%), Positives = 61/95 (64%)
Frame = +3 / +3
Query: 306 AFWLDEATERGISTGLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPL 485
AF I G SGG ++AQL KNGCCFISVAPRL A RC GS S PL
Sbjct: 627 AFGESALIRNSIIACFGTSGGFVQRMSAQLML*KNGCCFISVAPRL*ARRCCGSFTSKPL 806
Query: 486 IRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNG 590
I+SLAAKLT GDSGNL G PTTL +VA FP PL G
Sbjct: 807 IKSLAAKLTVGDSGNLSGWPTTLYSVARFPAPLKG 911
>gb|BI137634.1|BI137634 F089P73Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 471
Score = 146 bits (313), Expect(2) = 2e-043
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = -3 / +1
Query: 745 ELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNR 566
ELVAEP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT G+FLYE+L+G+TPFKG N
Sbjct: 64 ELVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPFKGENNE 243
Query: 565 ATLFNVVGQPLRFPESPVVS 506
TL N++ QPL FP V S
Sbjct: 244 KTLINILKQPLTFPRIGVNS 303
Score = 96.8 bits (205), Expect(2) = 1e-024
Identities = 45/77 (58%), Positives = 48/77 (62%)
Frame = +3 / -2
Query: 486 IRSLAAKLTTGDSGNLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSP 665
I S + L T G +KGC + L V PL GVLP SYKN P VHQSTALP P P
Sbjct: 323 ISSNSLLLFTPILGKVKGCLSMLIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCP 144
Query: 666 FIISGAKYSWVPTKDID 716
I SGAKYSWVPTKD D
Sbjct: 143 DITSGAKYSWVPTKDFD 93
Score = 50.1 bits (103), Expect(2) = 2e-043
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -3 / +2
Query: 463 PQHRLAYKRGATEIKQHPFFEGVNWALIRCATPP 362
P+ L +G+ EIK+H FF+GVNWALIR PP
Sbjct: 368 PKGELGA*KGSVEIKRHEFFKGVNWALIRSIKPP 469
Score = 36.8 bits (74), Expect(2) = 1e-024
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3 / -1
Query: 360 SGGVAHLINAQLTPSKNGCCFISVAP 437
SGG+ LI AQ TP KN C IS P
Sbjct: 471 SGGLIDLIKAQFTPLKNSCLLISTDP 394
>gb|CV259744.1|CV259744 WS02012.B21_C15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02012_C15 3', mRNA sequence
Length = 775
Score = 174 bits (375), Expect = 6e-043
Identities = 67/123 (54%), Positives = 89/123 (72%)
Frame = -3 / -2
Query: 715 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 536
S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T N++ +
Sbjct: 726 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 547
Query: 535 LRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDI 356
L+FP S VS A+ L+ LL ++P++RL + GA +IK+HPFF+GVNWAL+RC PP++
Sbjct: 546 LKFPGSIPVSLNAKQLMYRLLHRDPKNRLGSREGANDIKRHPFFKGVNWALVRCLNPPEL 367
Query: 355 PKP 347
P
Sbjct: 366 EAP 358
Score = 112 bits (240), Expect = 3e-024
Identities = 59/123 (47%), Positives = 67/123 (54%)
Frame = +3 / +2
Query: 348 GLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSG 527
G SGG +AQLTP KNGC IS AP N GSL S I A +LT G
Sbjct: 359 GASSSGGFKQRTSAQLTPLKNGCRLISFAPSREPNLFLGSLCSKRYINCFALRLTGILPG 538
Query: 528 NLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTK 707
NL+ L NV PLNGV P SY +P HQSTAL P+P +ISGA YS VPTK
Sbjct: 539 NLRSL*RMLANVFCLVFPLNGVYP*SISYSRIPRAHQSTALVWPAPVMISGAIYSSVPTK 718
Query: 708 DID 716
+ +
Sbjct: 719 EFE 727
>gb|DN486644.1|DN486644 P047G09.3pR Populus petioles cDNA library Populus tremula cDNA
clone P047G09 3', mRNA sequence
Length = 759
Score = 169 bits (364), Expect = 2e-041
Identities = 65/123 (52%), Positives = 87/123 (70%)
Frame = -3 / -3
Query: 715 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 536
S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T N++ +
Sbjct: 652 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 473
Query: 535 LRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDI 356
L+FP VS A+ + LL ++P++RL + GA +IK+HPFF+GVNWAL+RC PP++
Sbjct: 472 LKFPGRIPVSLNAKQSMYRLLHRDPKNRLGSREGANDIKRHPFFKGVNWALVRCLNPPEL 293
Query: 355 PKP 347
P
Sbjct: 292 EAP 284
Score = 112 bits (239), Expect = 4e-024
Identities = 59/123 (47%), Positives = 67/123 (54%)
Frame = +3 / +3
Query: 348 GLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSG 527
G SGG +AQLTP KNGC IS AP N GSL S I A +LT G
Sbjct: 285 GASSSGGFKQRTSAQLTPLKNGCRLISFAPSREPNLFLGSLCSKRYIDCFAFRLTGIRPG 464
Query: 528 NLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTK 707
NL+ L NV PLNGV P SY +P HQSTAL P+P +ISGA YS VPTK
Sbjct: 465 NLRSL*RMLANVFCLVFPLNGVYP*SISYSRIPRAHQSTALVWPAPVMISGAIYSSVPTK 644
Query: 708 DID 716
+ +
Sbjct: 645 EFE 653
>gb|CX168744.1|CX168744 E01_69-81_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 584
Score = 168 bits (362), Expect = 4e-041
Identities = 65/123 (52%), Positives = 87/123 (70%)
Frame = -3 / +3
Query: 715 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 536
S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T N++ +
Sbjct: 165 SNSFVGTEEYIAPEIISGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 344
Query: 535 LRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDI 356
L+FP VS A+ L+ LL ++P++RL GA +IK+HPFF+GV+WAL+RC PP++
Sbjct: 345 LKFPGRIPVSLNAKQLMYRLLHRDPKNRLGSLEGANDIKRHPFFKGVSWALVRCLNPPEL 524
Query: 355 PKP 347
P
Sbjct: 525 EAP 533
Score = 110 bits (235), Expect = 1e-023
Identities = 58/123 (47%), Positives = 67/123 (54%)
Frame = +3 / -2
Query: 348 GLGISGGVAHLINAQLTPSKNGCCFISVAPRLYANRC*GSLMSNPLIRSLAAKLTTGDSG 527
G SGG +AQLTP KNGC IS AP + GSL S I A +LT G
Sbjct: 532 GASSSGGFKQRTSAQLTPLKNGCRLISFAPSSEPSLFLGSLCSKRYINCFALRLTGIRPG 353
Query: 528 NLKGCPTTLNNVALFPEPLNGVLPKRSSYKNMPNVHQSTALPCPSPFIISGAKYSWVPTK 707
NL+ L NV PLNGV P SY +P HQSTAL P+P +ISGA YS VPTK
Sbjct: 352 NLRSL*RMLANVFCLVFPLNGVYP*SISYSRIPRAHQSTALVWPAPDMISGAIYSSVPTK 173
Query: 708 DID 716
+ +
Sbjct: 172 EFE 164
>gb|BI129456.1|BI129456 G090P88Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 520
Score = 152 bits (327), Expect(2) = 1e-037
Identities = 60/72 (83%), Positives = 65/72 (90%)
Frame = -3 / +2
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGK 593
LA QV PLP++V EPT ARS SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+ELL+G+
Sbjct: 293 LAAQVSPLPQVVVEPTSARSNSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGR 472
Query: 592 TPFKGSGNRATL 557
TPFKGSGN TL
Sbjct: 473 TPFKGSGNEETL 508
Score = 24.4 bits (47), Expect(2) = 1e-037
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -3 / +2
Query: 931 EDNQKGNPAYCVQPVCIEPACMQPS 857
E+ K + C + CI+P C+ P+
Sbjct: 146 EEPAKKMSSPCSEASCIDPFCLHPA 220
>gb|BI119621.1|BI119621 F002P40Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 397
Score = 103 bits (220), Expect(2) = 2e-037
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -3 / +3
Query: 772 LANQVRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVD 638
L NQV PLPEL+AEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVD
Sbjct: 261 LGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVD 395
Score = 73.0 bits (153), Expect(2) = 2e-037
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -3 / +3
Query: 928 DNQKGNPAYCVQPVCIEPACMQPSCVTTTTCFSPRFF 818
D + NP YCVQP CIEP+C+QPSCV TTCF PR F
Sbjct: 111 DPFRKNPVYCVQPACIEPSCIQPSCVAPTTCFGPRLF 221
>gb|CV264069.1|CV264069 WS02023.B21_I14 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02023_I14 3', mRNA sequence
Length = 423
Score = 149 bits (319), Expect = 3e-035
Identities = 54/100 (54%), Positives = 71/100 (71%)
Frame = -3 / -1
Query: 646 AVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIK 467
AVDWWT GIF++EL +G TPF+G + TL N+V + L FP+ PVV A+DLI LL+K
Sbjct: 423 AVDWWTLGIFMFELFYGVTPFRGVDHELTLANIVARALEFPKEPVVPATAKDLISQLLVK 244
Query: 466 EPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKP 347
+P R+ GA+ +K HPFF+GVNWAL+RC PP +P P
Sbjct: 243 DPARRMGSTMGASAVKHHPFFQGVNWALLRCTPPPYVPPP 124
>gb|DT481483.1|DT481483 WS02532.BR_A02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_A02 5', mRNA sequence
Length = 880
Score = 146 bits (313), Expect = 2e-034
Identities = 56/101 (55%), Positives = 69/101 (68%)
Frame = -3 / +2
Query: 676 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA 497
EII G GH SA+DWW GI LYE+L+G+TPF+G + T N++ + L FP S VS +
Sbjct: 236 EIITGMGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLSG 415
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRC 374
R LI LL ++P RL K GA EIKQHPFF G+NW LIRC
Sbjct: 416 RQLINALLNRDPSIRLGSKAGANEIKQHPFFRGINWPLIRC 538
>gb|DT486813.1|DT486813 WS02532.B21_A02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_A02 3', mRNA sequence
Length = 880
Score = 146 bits (313), Expect = 2e-034
Identities = 56/101 (55%), Positives = 69/101 (68%)
Frame = -3 / -2
Query: 676 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA 497
EII G GH SA+DWW GI LYE+L+G+TPF+G + T N++ + L FP S VS +
Sbjct: 645 EIITGMGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLSG 466
Query: 496 RDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRC 374
R LI LL ++P RL K GA EIKQHPFF G+NW LIRC
Sbjct: 465 RQLINALLNRDPSIRLGSKAGANEIKQHPFFRGINWPLIRC 343
>gb|BP933399.1|BP933399 BP933399 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-050_O04.r 3', mRNA sequence
Length = 652
Score = 133 bits (286), Expect = 1e-030
Identities = 51/75 (68%), Positives = 63/75 (84%)
Frame = -3 / -1
Query: 574 GNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGV 395
GN TL NVV + L+FP+SP+V F ARDLIR LL+KEP++RL +GATEIKQHPFFEG+
Sbjct: 652 GNEETLANVVSESLKFPDSPLVGFQARDLIRELLVKEPENRLGTHKGATEIKQHPFFEGL 473
Query: 394 NWALIRCATPPDIPK 350
NWALIRCA PP++P+
Sbjct: 472 NWALIRCAIPPEVPE 428
>gb|DV463015.1|DV463015 MTUNUL1.P10.F03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 792
Score = 79.9 bits (168), Expect(2) = 4e-030
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -3 / -3
Query: 682 APEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV 548
APE++ G GHG+ VDWW FG+ +YELL+G TPFKG +TL N+
Sbjct: 790 APELLSGNGHGNGVDWWAFGVLVYELLYGTTPFKGGSKESTLRNI 656
Score = 72.1 bits (151), Expect(2) = 4e-030
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = -3 / -3
Query: 499 ARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDI 356
ARDL+ LL+K P+ RL +GAT+IK+HPFF+G+ W LIR PP++
Sbjct: 595 ARDLVEKLLVKNPRQRLGCIKGATDIKRHPFFDGIKWPLIRNYKPPEV 452
>gb|CV254493.1|CV254493 WS0241.B21_G02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0241_G02 3', mRNA sequence
Length = 895
Score = 93.2 bits (197), Expect(2) = 5e-030
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -3 / -3
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 545
RS SFVGT EY++PE+++G+GH AVDWW GI YE+L+G TPFKG + T NV+
Sbjct: 725 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSYEMLYGTTPFKGKNRKETFRNVL 552
Score = 58.3 bits (121), Expect(2) = 5e-030
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -3 / -3
Query: 493 DLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALI 380
DLI LL K+P RL Y+RGA EIK+H FF+GV W L+
Sbjct: 509 DLIERLLEKDPTQRLGYQRGACEIKEHGFFKGVRWDLL 396
>gb|DT518009.1|DT518009 WS02435.B21_P01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02435_P01 3', mRNA sequence
Length = 869
Score = 93.2 bits (197), Expect(2) = 5e-030
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -3 / -3
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 545
RS SFVGT EY++PE+++G+GH AVDWW GI YE+L+G TPFKG + T NV+
Sbjct: 726 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSYEMLYGTTPFKGKNRKETFRNVL 553
Score = 58.3 bits (121), Expect(2) = 5e-030
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -3 / -3
Query: 493 DLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALI 380
DLI LL K+P RL Y+RGA EIK+H FF+GV W L+
Sbjct: 510 DLIERLLEKDPTQRLGYQRGACEIKEHGFFKGVRWDLL 397
>gb|BU813391.1|BU813391 N009H07 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 386
Score = 120 bits (256), Expect(2) = 2e-029
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -3 / +3
Query: 751 LPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL 602
LPELVAEPT ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL+ELL
Sbjct: 237 LPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELL 386
Score = 29.5 bits (58), Expect(2) = 2e-029
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +3
Query: 907 AYCVQPVCIEPA 872
A+CVQP CIEP+
Sbjct: 96 AFCVQPACIEPS 131
>gb|DT517326.1|DT517326 WS02433.B21_P21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_P21 3', mRNA sequence
Length = 760
Score = 89.5 bits (189), Expect(2) = 7e-029
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = -3 / -1
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQ 539
RS SFVGT EY++PE+++G+GH AVDWW GI +E+L+G TPF G + T NV+ +
Sbjct: 733 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSFEMLYGTTPFVGKNRKETFRNVLAK 554
Query: 538 PLRF 527
F
Sbjct: 553 KPEF 542
Score = 58.3 bits (121), Expect(2) = 7e-029
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -3 / -1
Query: 493 DLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALI 380
DLI LL K+P RL Y+RGA EIK+H FF+GV W L+
Sbjct: 517 DLIERLLEKDPTQRLGYQRGACEIKEHVFFKGVRWDLL 404
>gb|CF232477.1|CF232477 PtaJXO0011A11A1101 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 649
Score = 88.1 bits (186), Expect(2) = 2e-028
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = -3 / +1
Query: 718 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 545
RS SFVGT EY++PE+++G+GH AVDWW GI +E+L+G TPF G + T NV+
Sbjct: 238 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSFEMLYGTTPFVGKNRKETFRNVL 411
Score = 58.3 bits (121), Expect(2) = 2e-028
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -3 / +1
Query: 493 DLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALI 380
DLI LL K+P RL Y+RGA EIK+H FF+GV W L+
Sbjct: 454 DLIERLLEKDPTQRLGYQRGACEIKEHVFFKGVRWDLL 567
>gb|CV233282.1|CV233282 WS0121.B21_J05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0121_J05 3', mRNA sequence
Length = 539
Score = 116 bits (249), Expect(2) = 2e-027
Identities = 43/53 (81%), Positives = 50/53 (94%)
Frame = -3 / -1
Query: 499 ARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPKPVE 341
++DLIRGLL+KEPQHRL KRGATEIKQHPFFE VNWALIRC+TPP++P+PVE
Sbjct: 539 SQDLIRGLLVKEPQHRLGVKRGATEIKQHPFFESVNWALIRCSTPPEVPRPVE 381
Score = 25.8 bits (50), Expect(2) = 2e-027
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3 / -1
Query: 325 ASSSQKATSAAEKGSDYLELEFF*WSRMISHVQVVKLYL 209
+SS + A + + G YL+ EFF*+ ++ + + L L
Sbjct: 320 SSSKRMAGTDMKSGGKYLDFEFF*YRPVVLYCKCHLLML 204
>gb|DN489864.1|DN489864 T087C12.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T087C12 3', mRNA sequence
Length = 517
Score = 118 bits (252), Expect = 6e-026
Identities = 44/64 (68%), Positives = 56/64 (87%)
Frame = -3 / -2
Query: 541 QPLRFPESPVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPP 362
+ L+FP+SP+VSF ARDLIR L +KEP++RL +GATEIKQHPFFEG+NWALIRCA PP
Sbjct: 516 ESLKFPDSPLVSFQARDLIRELQVKEPENRLGTHKGATEIKQHPFFEGLNWALIRCAIPP 337
Query: 361 DIPK 350
++P+
Sbjct: 336 EVPE 325
>gb|BI131092.1|BI131092 G115P15Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 150
Score = 108 bits (230), Expect = 6e-023
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -3 / +1
Query: 760 VRPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 629
V PLPEL+AEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT
Sbjct: 19 VSPLPELMAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 150
>gb|CK092664.1|CK092664 G090P88.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G090P88 3', mRNA sequence
Length = 593
Score = 106 bits (226), Expect = 2e-022
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = -3 / -2
Query: 517 PVVSFAARDLIRGLLIKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPDIPK 350
P+VSF ARDLIRGLLIKEP++RL +GA EIKQHPF +G+NWALIRC PP++PK
Sbjct: 592 PIVSFHARDLIRGLLIKEPRNRLGSAKGAAEIKQHPFLDGLNWALIRCTIPPELPK 425
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 482,778,253
Number of Sequences: 369679
Number of extensions: 6919166
Number of successful extensions: 49407
Number of sequences better than 1.0e-020: 47
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 12582111220
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)