TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.170
(744 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus... 258 1e-078
gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus ... 196 9e-075
gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichoca... 210 1e-064
gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA li... 226 3e-063
gb|CA823228.1|CA823228 R22G04 two-month-old roots from clon... 231 4e-060
gb|BU832929.1|BU832929 T039H07 Populus apical shoot cDNA li... 144 5e-052
gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus ... 198 5e-052
gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichoca... 161 3e-041
gb|CK090838.1|CK090838 F027P19.3pR Populus flower cDNA libr... 124 1e-037
gb|CV269504.1|CV269504 WS0208.B21_G24 PTxN-IB-N-A-11 Populu... 145 2e-036
gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in... 149 2e-035
gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cD... 148 3e-035
gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library P... 141 6e-033
gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus tricho... 140 8e-033
gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Popul... 140 8e-033
gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Po... 140 1e-032
gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium... 140 1e-032
gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus... 140 1e-032
gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated wit... 140 1e-032
gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Popu... 140 1e-032
gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremonti... 140 1e-032
gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium... 139 1e-032
gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus ... 139 1e-032
gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Po... 139 2e-032
gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cD... 138 5e-032
gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Po... 137 7e-032
gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA librar... 136 1e-031
gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Po... 136 1e-031
gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Po... 135 3e-031
gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA librar... 135 3e-031
gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library... 133 1e-030
gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus ... 127 4e-030
gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus... 127 4e-030
gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid lib... 124 7e-028
gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid lib... 103 5e-027
gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus tri... 117 6e-026
gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA librar... 116 1e-025
gb|CN519287.1|CN519287 GQ0104.B3_D23 GQ010 Populus trichoca... 76 2e-024
gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6... 107 7e-023
gb|CA924736.1|CA924736 MTU7CL.P9.D08 Aspen leaf cDNA Librar... 68 4e-022
gb|CV269160.1|CV269160 WS0207.B21_H21 PTxN-IB-N-A-11 Populu... 104 8e-022
gb|AI166241.1|AI166241 a063p66u Hybrid aspen plasmid librar... 64 1e-021
gb|CV241850.1|CV241850 WS02513.B21_G18 PT-MB-N-A-15 Populus... 103 1e-021
gb|CA923974.1|CA923974 MTU7CL.P17.C04 Aspen leaf cDNA Libra... 68 2e-021
gb|DT488774.1|DT488774 WS02537.B21_G04 PT-MB-N-A-15 Populus... 76 2e-021
gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library... 101 6e-021
>gb|DT469311.1|DT469311 WS01917.C21_G04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01917_G04 3', mRNA sequence
Length = 809
Score = 258 bits (557), Expect(2) = 1e-078
Identities = 101/128 (78%), Positives = 115/128 (89%)
Frame = +2 / -3
Query: 5 WSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPT 184
WSPKFTVIVAQKN HTKFFQ SPDNV PGTV+D+ VCHP+++DFYMCAHAGMIGTTRPT
Sbjct: 672 WSPKFTVIVAQKNHHTKFFQDGSPDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPT 493
Query: 185 HYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMS 364
HYHVL DEIGF+AD++QE +HSLSYVYQRSTTAISVVAPV YAHLAA Q+S FL+ ++MS
Sbjct: 492 HYHVLLDEIGFSADDLQELIHSLSYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMS 313
Query: 365 DASSSQGG 388
+ SSS GG
Sbjct: 312 ETSSSHGG 289
Score = 187 bits (403), Expect(2) = 1e-055
Identities = 92/127 (72%), Positives = 99/127 (77%)
Frame = -1 / +2
Query: 387 PPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPI 208
PPWLED SD+SS+ +N AA+ A* TGATT++AVVLLWYT*+ E* NSC SSA KPI
Sbjct: 290 PPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATTDIAVVLLWYT*DKE*INSCRSSAEKPI 469
Query: 207 SSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWXFF*AT 28
SS RT** VGLVVPIIPACAHM*KS G QT LS TVPG TLSGD KNLV FF AT
Sbjct: 470 SSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPGGTLSGDPSWKNLV**FFCAT 649
Query: 27 ITVNLGD 7
ITVNLGD
Sbjct: 650 ITVNLGD 670
Score = 131 bits (280), Expect(2) = 1e-031
Identities = 57/128 (44%), Positives = 86/128 (67%)
Frame = -3 / +1
Query: 388 SSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH*DGCRAPLVHVRERMNKLLHLVGIETY 209
+S+A G +*H++ QE +L C +V + SN+ C A LVH+R+R+N+LL ++ +
Sbjct: 289 TSMARGCL*HVITLQEL*NLSCCQVSITDRSNYRYCCCASLVHIRQRVNQLL*IIS*KAN 468
Query: 208 LVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW*CRLKELGVXVLLSN 29
L+ +N+I+ PCCS HP MCTHVE+ L + N I++ SR+NIVW L++ V + L N
Sbjct: 469 LI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNSIINNGSRRNIVWRSILEKFSVMIFLCN 648
Query: 28 NHSELG*P 5
N+SELG*P
Sbjct: 649 NNSELG*P 672
Score = 56.1 bits (116), Expect(2) = 1e-078
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / -3
Query: 371 SSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LM 478
+SS GG TSAG PVPELP LH V SSMFFC* +
Sbjct: 309 TSSSHGGLTSAGQTPVPELPELHRNVCSSMFFC*CL 202
Score = 49.6 bits (102), Expect(2) = 1e-055
Identities = 23/42 (54%), Positives = 25/42 (59%)
Frame = -1 / +2
Query: 510 KTWSSILMRTHIS*QKNMELLTLSCRRGSSGTGALPAEVCPP 385
K SS + H QKN+EL T C GSSGTG PAEV PP
Sbjct: 170 KRSSSFCLVIHKHQQKNIELQTFRCSSGSSGTGVCPAEVRPP 295
Score = 25.4 bits (49), Expect(2) = 1e-031
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3 / +1
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAG 374
AE+H A D + R+L HR SR S G
Sbjct: 211 AEKHRAADIPV*LRKLGHRGLPSRS*TSMARG 306
>gb|CV240638.1|CV240638 WS0251.B21_O23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_O23 3', mRNA sequence
Length = 872
Score = 196 bits (423), Expect(3) = 9e-075
Identities = 76/99 (76%), Positives = 90/99 (90%)
Frame = +2 / -3
Query: 92 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQR 271
GTV+D+ VCHP+++DFYMCAHAGMIGTTRPTHYHVL DEIGF+AD++QE +HSLSYVYQR
Sbjct: 600 GTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHSLSYVYQR 421
Query: 272 STTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGG 388
STTAISVVAPV YAHLAA Q+S FL+ ++MS+ SSS GG
Sbjct: 420 STTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGG 304
Score = 148 bits (318), Expect(3) = 5e-052
Identities = 71/99 (71%), Positives = 78/99 (78%)
Frame = -1 / +2
Query: 387 PPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPI 208
PPWLED SD+SS+ +N AA+ A* TGATT++AVVLLWYT*+ E* NSC SSA KPI
Sbjct: 305 PPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATTDIAVVLLWYT*DKE*INSCRSSAEKPI 484
Query: 207 SSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVP 91
SS RT** VGLVVPIIPACAHM*KS G QT LS TVP
Sbjct: 485 SSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVP 601
Score = 95.0 bits (201), Expect(3) = 2e-027
Identities = 41/99 (41%), Positives = 65/99 (65%)
Frame = -3 / +1
Query: 388 SSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH*DGCRAPLVHVRERMNKLLHLVGIETY 209
+S+A G +*H++ QE +L C +V + SN+ C A LVH+R+R+N+LL ++ +
Sbjct: 304 TSMARGCL*HVITLQEL*NLSCCQVSITDRSNYRYCCCASLVHIRQRVNQLL*IIS*KAN 483
Query: 208 LVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSS 92
L+ +N+I+ PCCS HP MCTHVE+ L + N I++ S
Sbjct: 484 LI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNSIINNGS 600
Score = 67.0 bits (140), Expect(3) = 9e-075
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = +2 / -2
Query: 5 WSPKFTVIVAQKNXHTKFFQTASPDNVLPG 94
WSPKFTVIVAQKN HTKFFQ SPDNV PG
Sbjct: 769 WSPKFTVIVAQKNHHTKFFQDGSPDNVPPG 680
Score = 56.1 bits (116), Expect(3) = 9e-075
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / -3
Query: 371 SSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LM 478
+SS GG TSAG PVPELP LH V SSMFFC* +
Sbjct: 324 TSSSHGGLTSAGQTPVPELPELHRNVCSSMFFC*CL 217
Score = 49.6 bits (102), Expect(3) = 5e-052
Identities = 23/42 (54%), Positives = 25/42 (59%)
Frame = -1 / +2
Query: 510 KTWSSILMRTHIS*QKNMELLTLSCRRGSSGTGALPAEVCPP 385
K SS + H QKN+EL T C GSSGTG PAEV PP
Sbjct: 185 KRSSSFCLVIHKHQQKNIELQTFRCSSGSSGTGVCPAEVRPP 310
Score = 45.1 bits (92), Expect(3) = 5e-052
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = -1 / +3
Query: 93 PGRTLSGDAV*KNLVWXFF*ATITVNLGD 7
PG TLSGD KNLV FF ATITVNLGD
Sbjct: 681 PGGTLSGDPSWKNLV**FFCATITVNLGD 767
Score = 40.0 bits (81), Expect(3) = 2e-027
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -3 / +2
Query: 97 SSRKNIVW*CRLKELGVXVLLSNNHSELG*P 5
++R+NIVW L++ V + L NN+SELG*P
Sbjct: 677 TTRRNIVWRSILEKFSVMIFLCNNNSELG*P 769
Score = 25.4 bits (49), Expect(3) = 2e-027
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3 / +1
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAG 374
AE+H A D + R+L HR SR S G
Sbjct: 226 AEKHRAADIPV*LRKLGHRGLPSRS*TSMARG 321
>gb|CN520738.1|CN520738 GQ0108.B3_L05 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_L05 5', mRNA sequence
Length = 554
Score = 210 bits (454), Expect(2) = 1e-064
Identities = 82/106 (77%), Positives = 96/106 (90%)
Frame = +2 / +2
Query: 71 SPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHS 250
SPDNV PGTV+D+ VCHP+++DFYMCAHAGMIGTTRPTHYHVL DEIGF+AD++QE +HS
Sbjct: 2 SPDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELIHS 181
Query: 251 LSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGG 388
LSYVYQRSTTAISVVAPV YAHLAA Q+S FL+ ++MS+ SSS GG
Sbjct: 182 LSYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGG 319
Score = 161 bits (347), Expect(2) = 5e-048
Identities = 77/106 (72%), Positives = 84/106 (79%)
Frame = -1 / -3
Query: 387 PPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPI 208
PPWLED SD+SS+ +N AA+ A* TGATT++AVVLLWYT*+ E* NSC SSA KPI
Sbjct: 318 PPWLEDVSDMSSHFKNCEI*VAAK*A*RTGATTDIAVVLLWYT*DKE*INSCRSSAEKPI 139
Query: 207 SSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGD 70
SS RT** VGLVVPIIPACAHM*KS G QT LS TVPG TLSGD
Sbjct: 138 SSKRT**CVGLVVPIIPACAHM*KS*LCG*QTALSITVPGGTLSGD 1
Score = 109 bits (233), Expect(2) = 3e-025
Identities = 46/105 (43%), Positives = 71/105 (67%)
Frame = -3 / -2
Query: 388 SSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH*DGCRAPLVHVRERMNKLLHLVGIETY 209
+S+A G +*H++ QE +L C +V + SN+ C A LVH+R+R+N+LL ++ +
Sbjct: 319 TSMARGCL*HVITLQEL*NLSCCQVSITDRSNYRYCCCASLVHIRQRVNQLL*IIS*KAN 140
Query: 208 LVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW 74
L+ +N+I+ PCCS HP MCTHVE+ L + N I++ SR+NIVW
Sbjct: 139 LI*KNVIMCWPCCSYHPCMCTHVEIIALWVTNSIINNGSRRNIVW 5
Score = 56.1 bits (116), Expect(2) = 1e-064
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 371 SSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LM 478
+SS GG TSAG PVPELP LH V SSMFFC* +
Sbjct: 299 TSSSHGGLTSAGQTPVPELPELHRNVCSSMFFC*CL 406
Score = 49.6 bits (102), Expect(2) = 5e-048
Identities = 23/42 (54%), Positives = 25/42 (59%)
Frame = -1 / -3
Query: 510 KTWSSILMRTHIS*QKNMELLTLSCRRGSSGTGALPAEVCPP 385
K SS + H QKN+EL T C GSSGTG PAEV PP
Sbjct: 438 KRSSSFCLVIHKHQQKNIELQTFRCSSGSSGTGVCPAEVRPP 313
Score = 25.4 bits (49), Expect(2) = 3e-025
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3 / -2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAG 374
AE+H A D + R+L HR SR S G
Sbjct: 397 AEKHRAADIPV*LRKLGHRGLPSRS*TSMARG 302
>gb|BU835584.1|BU835584 T075G07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 574
Score = 226 bits (487), Expect(3) = 3e-063
Identities = 86/118 (72%), Positives = 102/118 (86%)
Frame = +2 / +1
Query: 35 QKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIG 214
+KN HTKFFQ SPDNV PGT++D+KVCHP+N DFY+CAHAGMIGTTRPTHYHVL DE+
Sbjct: 64 RKNHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVS 243
Query: 215 FNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGG 388
F+AD++QE VHSLSYV QRSTTAISVVAP+CYAHLAA Q+ F++ E+ S+ SSS GG
Sbjct: 244 FSADDLQELVHSLSYVCQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGG 417
Score = 166 bits (357), Expect(3) = 1e-051
Identities = 81/117 (69%), Positives = 86/117 (73%)
Frame = -1 / -3
Query: 387 PPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPI 208
PPWLE+ SD+SSN N AARWA* GATTEMAVVLLW+T E E T+SC SSA K
Sbjct: 416 PPWLEEVSDVSSNFINWPI*VAARWA*QIGATTEMAVVLLWHTYERECTSSCRSSAEKLT 237
Query: 207 SSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWXFF 37
SS +T * VGLVVPIIPA A *KS FLGWQTLLS VPG TLSGD KNLVW FF
Sbjct: 236 SSNKTW**VGLVVPIIPA*AQR*KSLFLGWQTLLSMIVPGGTLSGDPGWKNLVWWFF 66
Score = 100 bits (214), Expect(2) = 1e-023
Identities = 46/115 (40%), Positives = 71/115 (61%)
Frame = -3 / -2
Query: 385 SLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH*DGCRAPLVHVRERMNKLLHLVGIETYL 206
++A G + + + + AHL +VG+A W N+ DG RA L ++ E M+K L ++ +T L
Sbjct: 414 AMA*GSLGRVFKLHKLAHLSSCQVGIADWCNYRDGSRASLAYI*EGMHKFLQIIC*KTNL 235
Query: 205 VVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW*CRLKELGVXV 41
V QNM+V PC NHPSM T +EV V MA+F ++ +R +I+ RL++ V V
Sbjct: 234 V*QNMVVSRPCSPNHPSMSTEIEVIVSWMADFVVNDRTRWDIIRRSRLEKFSVVV 70
Score = 46.4 bits (95), Expect(3) = 1e-051
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPP 385
QKNMEL T SC G+ GTG PA+V PP
Sbjct: 494 QKNMELQTFSCSLGNCGTGTAPADVTPP 411
Score = 29.5 bits (58), Expect(3) = 1e-051
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 42 FF*ATITVNLGDH 4
FF*ATIT N+GDH
Sbjct: 70 FF*ATITANVGDH 32
Score = 29.0 bits (57), Expect(2) = 1e-023
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -3 / -2
Query: 466 EEHGAPDFVMQARQLRHRSTASRGMPS 386
+EHG +F++Q RQL R+++ R P+
Sbjct: 492 KEHGIANFLLQPRQLWDRNSSCRCHPA 412
Score = 28.1 bits (55), Expect(3) = 3e-063
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 2 KWSPKFTVIVAQK 40
+WSP F VIVAQK
Sbjct: 30 RWSPTFAVIVAQK 68
Score = 27.2 bits (53), Expect(3) = 3e-063
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1 / +3
Query: 409 CSCAGAASPA*QSQELHVLLLA 474
CSC A A +S + HVLLL+
Sbjct: 435 CSCPTVAEAAGESLQFHVLLLS 500
>gb|CA823228.1|CA823228 R22G04 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 659
Score = 231 bits (499), Expect = 4e-060
Identities = 89/111 (80%), Positives = 100/111 (90%)
Frame = +2 / +2
Query: 2 KWSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRP 181
KWSP F VIVAQKN HTKFFQ SPDNV PGT++D+KVCHP+N DFY+CAHAGMIGTTRP
Sbjct: 317 KWSPTFVVIVAQKNHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRP 496
Query: 182 THYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQV 334
THYHVL DE+GF+AD++Q VHSLSYVYQRSTTAISVVAP+CYAHLAA Q+
Sbjct: 497 THYHVLLDEVGFSADDLQXPVHSLSYVYQRSTTAISVVAPICYAHLAATQM 649
Score = 171 bits (368), Expect = 4e-042
Identities = 82/108 (75%), Positives = 84/108 (77%)
Frame = -1 / -3
Query: 324 AARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAH 145
AARWA* GATTEMAVVLLWYT E E T SC SSA KP SS +T * VGLVVPIIPA A
Sbjct: 639 AARWA*QIGATTEMAVVLLWYTYERECTGSCRSSAEKPTSSNKTW**VGLVVPIIPA*AQ 460
Query: 144 M*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWXFF*ATITVNLGDHF 1
*KS FLGWQTLLS VPG TLSGD KNLVW FF*ATIT N+GDHF
Sbjct: 459 R*KSLFLGWQTLLSMIVPGGTLSGDPGWKNLVWWFF*ATITTNVGDHF 316
Score = 102 bits (217), Expect = 3e-021
Identities = 48/112 (42%), Positives = 69/112 (61%)
Frame = -3 / -2
Query: 337 AHLGCSEVGVAHWSNH*DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHP 158
AHL +VG+A W + DG RA LV++ E M++ L ++ +T LV QNM+V PC NHP
Sbjct: 652 AHLSSCQVGIADWCXYRDGSRASLVYI*EGMHRXLQIIC*KTNLV*QNMVVSRPCSPNHP 473
Query: 157 SMCTHVEVEVLRMANFTIHHSSRKNIVW*CRLKELGVXVLLSNNHSELG*PL 2
SM T +EV V MA+F ++ +R I+ RL++ V V LS N+ + PL
Sbjct: 472 SMSTEIEVIVSWMADFVVNDRTRWYIIRRSRLEKFSVVVFLSYNYHKRWGPL 317
>gb|BU832929.1|BU832929 T039H07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 563
Score = 144 bits (308), Expect(3) = 5e-052
Identities = 53/69 (76%), Positives = 62/69 (89%)
Frame = +2 / +1
Query: 56 FFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQ 235
F ASPDNV PGT++D+KVCHP+N DFY+CAHAGMIGTTRPTHYHVL DE+GF+AD++Q
Sbjct: 13 FSNLASPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQ 192
Query: 236 EFVHSLSYV 262
E VHSLSYV
Sbjct: 193 ELVHSLSYV 219
Score = 91.3 bits (193), Expect(3) = 2e-041
Identities = 47/65 (72%), Positives = 49/65 (75%)
Frame = -1 / -1
Query: 261 T*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRT 82
T E E T+SC SSA KP SS +T * VGLVVPIIPA A *KS FLGWQTLLS VPG T
Sbjct: 218 TYERECTSSCRSSAEKPTSSNKTW**VGLVVPIIPA*AQR*KSLFLGWQTLLSMIVPGGT 39
Query: 81 LSGDA 67
LSGDA
Sbjct: 38 LSGDA 24
Score = 72.5 bits (152), Expect(3) = 5e-052
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2 / +2
Query: 263 YQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGG 388
YQRSTTAISV AP+CYAHLAA Q+ F++ E+ S+ SSS GG
Sbjct: 221 YQRSTTAISVAAPICYAHLAATQMGQFMKFEDTSETSSSHGG 346
Score = 69.8 bits (146), Expect(3) = 2e-041
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = -1 / -3
Query: 387 PPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWY 262
PPWLE+ SD+SSN N AARWA* GA TEMAVVLLWY
Sbjct: 345 PPWLEEVSDVSSNFINWPI*VAARWA*QIGAATEMAVVLLWY 220
Score = 46.9 bits (96), Expect(3) = 2e-041
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPP 385
QKNMEL T SC G+ GTG PA+V PP
Sbjct: 423 QKNMELQTFSCNLGNCGTGTAPADVTPP 340
Score = 26.7 bits (52), Expect(3) = 5e-052
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1 / +1
Query: 409 CSCAGAASPA*QSQELHVLLLA 474
CSC A A +S + HVLLL+
Sbjct: 364 CSCPTVAEVAGESLQFHVLLLS 429
>gb|CV246013.1|CV246013 WS0259.B21_P22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_P22 3', mRNA sequence
Length = 744
Score = 198 bits (426), Expect(2) = 5e-052
Identities = 74/99 (74%), Positives = 89/99 (89%)
Frame = +2 / -2
Query: 92 GTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQR 271
GT++D+KVCHP+N DFY+CAHAGMIGTTRPTHYHVL DE+GF+AD++QE VHSLSYVYQR
Sbjct: 710 GTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQR 531
Query: 272 STTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGG 388
STTAISVVAP+CYAHLAA Q+ F++ E+ S+ SSS GG
Sbjct: 530 STTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGG 414
Score = 143 bits (307), Expect(2) = 4e-042
Identities = 69/99 (69%), Positives = 74/99 (74%)
Frame = -1 / +1
Query: 387 PPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPI 208
PPWLE+ S++SSN N AARWA* GATTEMAVVLLWYT E E T+SC SSA KP
Sbjct: 415 PPWLEEVSEVSSNFINWPI*VAARWA*QIGATTEMAVVLLWYTYERECTSSCRSSAEKPT 594
Query: 207 SSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVP 91
SS +T * VGLVVPIIPA A *KS FLGWQTLLS VP
Sbjct: 595 SSNKTW**VGLVVPIIPA*AQR*KSLFLGWQTLLSMIVP 711
Score = 94.1 bits (199), Expect(2) = 7e-023
Identities = 41/95 (43%), Positives = 61/95 (64%)
Frame = -3 / +3
Query: 385 SLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH*DGCRAPLVHVRERMNKLLHLVGIETYL 206
++A G + + + + AHL +VG+A W N+ DG RA LV++ E M+K L ++ +T L
Sbjct: 417 TMA*GSLRSIFKLHKLAHLSSCQVGIADWCNYRDGSRASLVYI*EGMHKFLQIIC*KTNL 596
Query: 205 VVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIH 101
V QNM+V PC NHPSM T +EV V MA+F ++
Sbjct: 597 V*QNMVVSRPCSPNHPSMSTEIEVIVSWMADFVVN 701
Score = 90.0 bits (190), Expect(2) = 9e-029
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +1 / -1
Query: 112 SLPS*ELRLLHVCTCWDDWNNKAHPLSCSARRDRFQCRRDAGVCSFALLRVPEEHDSHLS 291
SLPS + LL +C+CWDDW+ KA+ L C RR F R AG C+F L+ +P++HD HL
Sbjct: 690 SLPSKKQ*LLSLCSCWDDWDYKAYSLPCFVRRGWFFSR*SAGTCAFPLICIPKKHDCHLC 511
Query: 292 GCSSVLRPP 318
C+++L PP
Sbjct: 510 SCTNLLCPP 484
Score = 57.0 bits (118), Expect(2) = 9e-029
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +2 / -2
Query: 356 EMSDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC* 472
E + +SS GG TSAG+ PVP+LPRL +KV +SMFFC*
Sbjct: 449 EDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFFC* 333
Score = 48.3 bits (99), Expect(2) = 4e-042
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -1 / +1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPP 385
QKNMEL T SC G+ GTG PAEV PP
Sbjct: 337 QKNMELQTFSCNLGNCGTGTAPAEVTPP 420
Score = 33.1 bits (66), Expect(2) = 7e-023
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -3 / +3
Query: 466 EEHGAPDFVMQARQLRHRSTASRGMPS 386
+EHG +F++Q RQL R+++ RG P+
Sbjct: 339 KEHGIANFLLQPRQLWDRNSSCRGHPT 419
Score = 26.7 bits (52), Expect(2) = 5e-052
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1 / -1
Query: 409 CSCAGAASPA*QSQELHVLLLA 474
CSC A A +S + HVLLL+
Sbjct: 396 CSCPTVAEVAGESLQFHVLLLS 331
>gb|CN518723.1|CN518723 GQ0104.B3_E10 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_E10 5', mRNA sequence
Length = 695
Score = 161 bits (347), Expect(2) = 3e-041
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2 / +1
Query: 134 DFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYA 313
DFY+CAHAGM TRPTHYHVL DE+GF+AD++QE VHSLSYVYQRSTTAISVVAP+CYA
Sbjct: 1 DFYLCAHAGMXXXTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYA 180
Query: 314 HLAAAQVSTFLRLEEMSDASSSQGG 388
HLAA Q+ F++ E+ S+ SSS GG
Sbjct: 181 HLAATQMGQFMKFEDTSETSSSHGG 255
Score = 109 bits (233), Expect(2) = 5e-032
Identities = 55/84 (65%), Positives = 60/84 (71%)
Frame = -1 / -1
Query: 387 PPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPI 208
PPWLE+ S++SSN N AARWA* GATTEMAVVLLWYT E E T+SC SSA KP
Sbjct: 254 PPWLEEVSEVSSNFINWPI*VAARWA*QIGATTEMAVVLLWYTYERECTSSCRSSAEKPT 75
Query: 207 SSCRT**WVGLVVPIIPACAHM*K 136
SS +T * VGLV IIPA A *K
Sbjct: 74 SSNKTW**VGLVXXIIPA*AQR*K 3
Score = 78.5 bits (165), Expect(2) = 2e-025
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +1 / +3
Query: 136 LLHVCTCWDDWNNKAHPLSCSARRDRFQCRRDAGVCSFALLRVPEEHDSHLSGCSSVLRP 315
LL +C+CWDD KA+ L C RR F R AG C+F L+ +P++HD HL C+++L P
Sbjct: 3 LLSLCSCWDDXXYKAYSLPCFVRRGWFFSR*SAGTCAFPLICIPKKHDCHLCSCTNLLCP 182
Query: 316 P 318
P
Sbjct: 183 P 185
Score = 57.0 bits (118), Expect(2) = 2e-025
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +2 / +1
Query: 356 EMSDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC* 472
E + +SS GG TSAG+ PVP+LPRL +KV +SMFFC*
Sbjct: 220 EDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFFC* 336
Score = 48.3 bits (99), Expect(2) = 5e-032
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPP 385
QKNMEL T SC G+ GTG PAEV PP
Sbjct: 332 QKNMELQTFSCNLGNCGTGTAPAEVTPP 249
Score = 26.7 bits (52), Expect(2) = 3e-041
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1 / +3
Query: 409 CSCAGAASPA*QSQELHVLLLA 474
CSC A A +S + HVLLL+
Sbjct: 273 CSCPTVAEVAGESLQFHVLLLS 338
>gb|CK090838.1|CK090838 F027P19.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F027P19 3', mRNA sequence
Length = 680
Score = 124 bits (266), Expect(2) = 1e-037
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +2 / -2
Query: 161 MIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVST 340
++GT+RP HYHVL DEIGF+ DE+ VHSLSYVYQRSTTA+S+VAP+CYAHLAAAQ+
Sbjct: 658 LLGTSRPAHYHVLLDEIGFSPDELLNLVHSLSYVYQRSTTAVSIVAPICYAHLAAAQIGQ 479
Query: 341 FLRLEEMSDASSSQ 382
F++ E+ + S Q
Sbjct: 478 FMKFEDFFEPFSGQ 437
Score = 51.9 bits (107), Expect(2) = 1e-037
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +2 / -2
Query: 395 TSAGSAPVPELPRLHDKVRSSMFFC* 472
TS GS PVPELPRLH+ V SMFFC*
Sbjct: 427 TSVGSTPVPELPRLHENVEGSMFFC* 350
>gb|CV269504.1|CV269504 WS0208.B21_G24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0208_G24 3', mRNA sequence
Length = 719
Score = 145 bits (312), Expect(2) = 2e-036
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +2 / -3
Query: 161 MIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVST 340
MIGTTRPTHYHVL DE+GF+AD++QE VHSLSYVYQRSTTAISVVAP+CYAHLAA Q+
Sbjct: 717 MIGTTRPTHYHVLLDEVGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQ 538
Query: 341 FLRLEEMSDASSSQGG 388
F++ E+ S+ SSS GG
Sbjct: 537 FMKFEDTSETSSSHGG 490
Score = 107 bits (228), Expect(2) = 2e-031
Identities = 51/76 (67%), Positives = 57/76 (75%)
Frame = -1 / +2
Query: 387 PPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPI 208
PPWLE+ S++SSN N AARWA* GATT+MAVVLLWYT E E T+SC SSA KP
Sbjct: 491 PPWLEEVSEVSSNFINWPI*VAARWA*QIGATTDMAVVLLWYTYERECTSSCRSSAEKPT 670
Query: 207 SSCRT**WVGLVVPII 160
SS +T * VGLVVPII
Sbjct: 671 SSNKTW**VGLVVPII 718
Score = 67.0 bits (140), Expect(2) = 6e-022
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +1 / -2
Query: 160 DDWNNKAHPLSCSARRDRFQCRRDAGVCSFALLRVPEEHDSHLSGCSSVLRPP 318
DDW+ KA+ L C RR F R AG C+F L+ +P++HD H+ C+++L PP
Sbjct: 718 DDWDYKAYSLPCFVRRGWFFSR*SAGTCAFPLICIPKKHDCHICSCTNLLCPP 560
Score = 57.0 bits (118), Expect(2) = 6e-022
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +2 / -3
Query: 356 EMSDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC* 472
E + +SS GG TSAG+ PVP+LPRL +KV +SMFFC*
Sbjct: 525 EDTSETSSSHGGVTSAGAVPVPQLPRLQEKVCNSMFFC* 409
Score = 48.3 bits (99), Expect(2) = 2e-031
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -1 / +2
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPP 385
QKNMEL T SC G+ GTG PAEV PP
Sbjct: 413 QKNMELQTFSCNLGNCGTGTAPAEVTPP 496
Score = 26.7 bits (52), Expect(2) = 2e-036
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1 / -2
Query: 409 CSCAGAASPA*QSQELHVLLLA 474
CSC A A +S + HVLLL+
Sbjct: 472 CSCPTVAEVAGESLQFHVLLLS 407
>gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700006E12F1, mRNA sequence
Length = 418
Score = 149 bits (320), Expect = 2e-035
Identities = 59/123 (47%), Positives = 76/123 (61%)
Frame = +2 / +2
Query: 41 NXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFN 220
N H T N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F
Sbjct: 32 NNHRDRTSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 211
Query: 221 ADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTS 400
AD +Q ++L Y Y R T ++SVV P YAHLAA + + + S+ G GH +
Sbjct: 212 ADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYTEPVMQENGSAGSGAGHGA 391
Query: 401 AGS 409
G+
Sbjct: 392 KGT 400
>gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 503
Score = 148 bits (318), Expect = 3e-035
Identities = 61/124 (49%), Positives = 78/124 (62%)
Frame = +2 / +2
Query: 47 HTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNAD 226
H K QT N+LPGTVVD+K+CHP FDFY+ +HAG+ GT+RPTHYHVL DE F AD
Sbjct: 56 HNKRDQTDRSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFTAD 235
Query: 227 EMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAG 406
+Q ++L Y Y R T ++S+V P YAHLAA + ++ E S+S G A
Sbjct: 236 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDSGSTSATGRSVEAR 415
Query: 407 SAPV 418
S PV
Sbjct: 416 SLPV 427
>gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 141 bits (302), Expect = 6e-033
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +2 / +2
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 251 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 430
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
Y R T ++S+V P YAHLAA + ++ E S + G G+ P R
Sbjct: 431 TYARCTRSVSIVPPAYYAHLAAFRARXYMEPETSDSESIASGMAGGRGGAGGGPRPTR 604
>gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_E09 5', mRNA sequence
Length = 849
Score = 140 bits (301), Expect = 8e-033
Identities = 58/124 (46%), Positives = 75/124 (60%)
Frame = +2 / +3
Query: 47 HTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNAD 226
H K T N+LPGTVVD+K+CHP FDFY+ +HAG+ GT+RPTHYHVL DE F AD
Sbjct: 243 HNKRDLTDKSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFTAD 422
Query: 227 EMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAG 406
+Q ++L Y Y R T ++S+V P YAHLAA + ++ S+ G A
Sbjct: 423 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEDVTSDSGSTGATGRSVEAR 602
Query: 407 SAPV 418
S PV
Sbjct: 603 SLPV 614
>gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_C18 3', mRNA sequence
Length = 960
Score = 140 bits (301), Expect = 8e-033
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +2 / -3
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 733 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 554
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
Y R T ++S+V P YAHLAA + ++ E S + G G+ P R
Sbjct: 553 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRQTR 380
>gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 650
Score = 140 bits (300), Expect = 1e-032
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +2 / +3
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 27 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 206
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
Y R T ++S+V P YAHLAA + ++ E S + G G+ P R
Sbjct: 207 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRPTR 380
>gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB34DPA12 3', mRNA sequence
Length = 646
Score = 140 bits (300), Expect = 1e-032
Identities = 55/115 (47%), Positives = 72/115 (62%)
Frame = +2 / -2
Query: 65 TASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFV 244
T N+LPG VVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q
Sbjct: 624 TDKSGNILPGAVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLT 445
Query: 245 HSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGS 409
++L Y Y R T ++SVV P YAHLAA + + + S+ G H + G+
Sbjct: 444 NNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYTEPVMQENGSAGSGACHGAKGT 280
>gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_J06 3', mRNA sequence
Length = 849
Score = 140 bits (300), Expect = 1e-032
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +2 / -2
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 722 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 543
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
Y R T ++S+V P YAHLAA + ++ E S + G G+ P R
Sbjct: 542 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRPTR 369
>gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 555
Score = 140 bits (300), Expect = 1e-032
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +2 / +3
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 51 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 230
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
Y R T ++S+V P YAHLAA + ++ E S + G G+ P R
Sbjct: 231 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRPTR 404
>gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_L23 3', mRNA sequence
Length = 910
Score = 140 bits (300), Expect = 1e-032
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +2 / -3
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 746 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 567
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
Y R T ++S+V P YAHLAA + ++ E S + G G+ P R
Sbjct: 566 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRPTR 393
>gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 830
Score = 140 bits (300), Expect = 1e-032
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +2 / -3
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 717 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 538
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
Y R T ++S+V P YAHLAA + ++ E S + G G+ P R
Sbjct: 537 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRPTR 364
>gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB44DPH02 3', mRNA sequence
Length = 762
Score = 139 bits (299), Expect = 1e-032
Identities = 53/102 (51%), Positives = 69/102 (67%)
Frame = +2 / -2
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 506 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 327
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ E S + G
Sbjct: 326 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSLTSG 201
>gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_O22 3', mRNA sequence
Length = 875
Score = 139 bits (299), Expect = 1e-032
Identities = 53/102 (51%), Positives = 69/102 (67%)
Frame = +2 / -1
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 641 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 462
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ E S + G
Sbjct: 461 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSLTSG 336
>gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 618
Score = 139 bits (298), Expect = 2e-032
Identities = 53/102 (51%), Positives = 69/102 (67%)
Frame = +2 / +1
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 295 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 474
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ E S + G
Sbjct: 475 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIASG 600
>gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 627
Score = 138 bits (295), Expect = 5e-032
Identities = 54/107 (50%), Positives = 70/107 (65%)
Frame = +2 / +2
Query: 89 PGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQ 268
PGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y Y
Sbjct: 2 PGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYA 181
Query: 269 RSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGS 409
R T ++SVV P YAHLAA +V + + S+ G H + G+
Sbjct: 182 RCTRSVSVVPPAYYAHLAAFRVRFYTEPVMQENGSAGSGACHGAKGT 322
>gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 623
Score = 137 bits (294), Expect = 7e-032
Identities = 52/102 (50%), Positives = 68/102 (66%)
Frame = +2 / +1
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 88 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 267
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHL A + ++ E S + G
Sbjct: 268 TYARCTRSVSIVPPAYYAHLVAFRARFYMEPETSDSESIASG 393
>gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 136 bits (292), Expect = 1e-031
Identities = 51/92 (55%), Positives = 66/92 (71%)
Frame = +2 / +2
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 215 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY 394
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLE 355
Y R T ++S+V P YAHLAA + ++ E
Sbjct: 395 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPE 490
>gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 666
Score = 136 bits (292), Expect = 1e-031
Identities = 55/117 (47%), Positives = 72/117 (61%)
Frame = +2 / +2
Query: 83 VLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYV 262
+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 17 LLPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYT 196
Query: 263 YQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
Y R T ++S+V P YAHLAA + ++ E S + G G+ P R
Sbjct: 197 YARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRPTR 367
>gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 679
Score = 135 bits (290), Expect = 3e-031
Identities = 52/101 (51%), Positives = 68/101 (67%)
Frame = +2 / +2
Query: 83 VLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYV 262
+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 17 LLPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYT 196
Query: 263 YQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ E S + G
Sbjct: 197 YARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESIASG 319
>gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041G07 3', mRNA sequence
Length = 811
Score = 135 bits (289), Expect = 3e-031
Identities = 53/110 (48%), Positives = 72/110 (65%)
Frame = +2 / -3
Query: 47 HTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNAD 226
H + QT N+LPGTVVD+ +CHP FDFY+ +HAG+ GT+RPTHYHVL DE F++D
Sbjct: 677 HNRREQTDKSGNILPGTVVDTTICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFSSD 498
Query: 227 EMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASS 376
+Q ++L Y Y R T ++S+V P YAHLAA + ++ E SS
Sbjct: 497 GLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDAGSS 348
>gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 610
Score = 133 bits (285), Expect = 1e-030
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +2 / +3
Query: 83 VLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYV 262
+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 357 ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYT 536
Query: 263 YQRSTTAISVVAPVCYAHLAAAQ 331
Y R T ++S+V P YAHLAA++
Sbjct: 537 YARCTRSVSIVPPAYYAHLAASR 605
>gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 5', mRNA sequence
Length = 733
Score = 127 bits (273), Expect(2) = 4e-030
Identities = 49/96 (51%), Positives = 68/96 (70%)
Frame = +2 / +3
Query: 71 SPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHS 250
S +N+ PGTVVD+ + HP+ FDFY+C+H G+ GT+RPTHYHVL DE F +DE+Q+ V++
Sbjct: 12 SDENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYN 191
Query: 251 LSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEE 358
L Y + R T +S+V P YAHLAA + +L E
Sbjct: 192 LCYTFVRCTKPVSLVPPAYYAHLAAYRGRLYLERSE 299
Score = 23.5 bits (45), Expect(2) = 4e-030
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2 / +3
Query: 425 LPRLHDKVRSSMFFC*LM 478
LP+L + ++ MF+C* +
Sbjct: 363 LPKLSENLKKLMFYC*FL 416
>gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_I12 3', mRNA sequence
Length = 733
Score = 127 bits (273), Expect(2) = 4e-030
Identities = 49/96 (51%), Positives = 68/96 (70%)
Frame = +2 / -3
Query: 71 SPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHS 250
S +N+ PGTVVD+ + HP+ FDFY+C+H G+ GT+RPTHYHVL DE F +DE+Q+ V++
Sbjct: 722 SDENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYN 543
Query: 251 LSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEE 358
L Y + R T +S+V P YAHLAA + +L E
Sbjct: 542 LCYTFVRCTKPVSLVPPAYYAHLAAYRGRLYLERSE 435
Score = 23.5 bits (45), Expect(2) = 4e-030
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2 / -3
Query: 425 LPRLHDKVRSSMFFC*LM 478
LP+L + ++ MF+C* +
Sbjct: 371 LPKLSENLKKLMFYC*FL 318
>gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P29 5', mRNA sequence
Length = 475
Score = 124 bits (265), Expect = 7e-028
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = +2 / +1
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 211 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLWY 390
Query: 260 VYQRSTTAISVVAPVCY 310
Y R T ++SVV P Y
Sbjct: 391 TYARCTRSVSVVPPAYY 441
>gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A063P66 5', mRNA sequence
Length = 546
Score = 103 bits (220), Expect(2) = 5e-027
Identities = 43/101 (42%), Positives = 58/101 (57%)
Frame = +2 / +1
Query: 131 FDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCY 310
FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y Y R T ++S+V P Y
Sbjct: 55 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYY 234
Query: 311 AHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
AHLAA + ++ E S + G G+ P R
Sbjct: 235 AHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRPTR 357
Score = 37.3 bits (75), Expect(2) = 5e-027
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2 / +2
Query: 80 NVLPGTVVDSKVCHPKN 130
N+LPGTVVDSK+CH N
Sbjct: 5 NILPGTVVDSKICHLLN 55
>gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_A17
3', mRNA sequence
Length = 709
Score = 117 bits (251), Expect = 6e-026
Identities = 47/108 (43%), Positives = 63/108 (58%)
Frame = +2 / +3
Query: 110 KVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAIS 289
K+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y Y R T ++S
Sbjct: 3 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVS 182
Query: 290 VVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
+V P YAHLAA + ++ E S + G G+ P R
Sbjct: 183 IVPPAYYAHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRPTR 326
>gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 494
Score = 116 bits (249), Expect = 1e-025
Identities = 44/93 (47%), Positives = 60/93 (64%)
Frame = +2 / +3
Query: 107 SKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAI 286
SK+CHP F+FY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y Y R T ++
Sbjct: 3 SKICHPTEFNFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSV 182
Query: 287 SVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
S+V P YAHLAA + ++ E S + G
Sbjct: 183 SIVPPAYYAHLAAFRARFYMEPETSDSGSLTSG 281
>gb|CN519287.1|CN519287 GQ0104.B3_D23 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_D23 5', mRNA sequence
Length = 618
Score = 76.2 bits (160), Expect(2) = 2e-024
Identities = 32/47 (68%), Positives = 37/47 (78%)
Frame = +2 / +2
Query: 248 SLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGG 388
SLSYVYQR ISVVAPV YAHLAA Q+S FL+ ++MS+ SSS GG
Sbjct: 2 SLSYVYQRXXXXISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGG 142
Score = 56.1 bits (116), Expect(2) = 2e-024
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 371 SSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LM 478
+SS GG TSAG PVPELP LH V SSMFFC* +
Sbjct: 122 TSSSHGGLTSAGQTPVPELPELHRNVCSSMFFC*CL 229
>gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400030C07F1, mRNA sequence
Length = 687
Score = 107 bits (229), Expect = 7e-023
Identities = 39/73 (53%), Positives = 55/73 (75%)
Frame = +2 / +2
Query: 71 SPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHS 250
S +N+ PGTVVD+ + HPK FDFY+C+H G+ GT++PTHYHVL DE F +DE+Q+ V++
Sbjct: 467 SDENIPPGTVVDTVITHPKEFDFYLCSHWGVKGTSKPTHYHVLWDENQFTSDELQKLVYN 646
Query: 251 LSYVYQRSTTAIS 289
L Y + R T +S
Sbjct: 647 LCYTFVRCTKPVS 685
>gb|CA924736.1|CA924736 MTU7CL.P9.D08 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 383
Score = 68.4 bits (143), Expect(2) = 4e-022
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2 / -3
Query: 269 RSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGG 388
RSTTAISVVAPV YAHLAA Q+S FL+ ++MS+ SSS GG
Sbjct: 381 RSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGG 262
Score = 56.1 bits (116), Expect(2) = 4e-022
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / -3
Query: 371 SSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LM 478
+SS GG TSAG PVPELP LH V SSMFFC* +
Sbjct: 282 TSSSHGGLTSAGQTPVPELPELHRNVCSSMFFC*CL 175
>gb|CV269160.1|CV269160 WS0207.B21_H21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_H21 3', mRNA sequence
Length = 688
Score = 104 bits (221), Expect = 8e-022
Identities = 43/101 (42%), Positives = 58/101 (57%)
Frame = +2 / -1
Query: 131 FDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCY 310
FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y Y R T ++S+V P Y
Sbjct: 682 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYY 503
Query: 311 AHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
AHLAA + ++ E S + G G+ P R
Sbjct: 502 AHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRQTR 380
>gb|AI166241.1|AI166241 a063p66u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 382
Score = 64.3 bits (134), Expect(2) = 1e-021
Identities = 29/79 (36%), Positives = 40/79 (50%)
Frame = +2 / +3
Query: 185 HYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMS 364
HYHVL DE F AD +Q ++L Y R T ++S+V P YAHLAA + ++ E
Sbjct: 84 HYHVLWDENKFTADGLQSLTNNLCYTXARCTRSVSIVPPAYYAHLAAFRARFYMEPETSD 263
Query: 365 DASSSQGGGHTSAGSAPVP 421
S + G G+ P
Sbjct: 264 SESIASGMAGGRGGAGGGP 320
Score = 58.8 bits (122), Expect(2) = 1e-021
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +2 / +1
Query: 101 VDSKVCHPKNFDFYMCAHAGMIGTTRP 181
VDSK+CHP FDFY+C+HAG+ GT+RP
Sbjct: 1 VDSKICHPTEFDFYLCSHAGIQGTSRP 81
>gb|CV241850.1|CV241850 WS02513.B21_G18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02513_G18 3', mRNA sequence
Length = 677
Score = 103 bits (220), Expect = 1e-021
Identities = 43/101 (42%), Positives = 58/101 (57%)
Frame = +2 / -1
Query: 131 FDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCY 310
FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y Y R T ++S+V P Y
Sbjct: 671 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYY 492
Query: 311 AHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
AHLAA + ++ E S + G G+ P R
Sbjct: 491 AHLAAFRARFYMEPETSDSESIASGMAGGRGGAGGGPRPTR 369
>gb|CA923974.1|CA923974 MTU7CL.P17.C04 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 383
Score = 68.4 bits (143), Expect(2) = 2e-021
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +2 / +3
Query: 269 RSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGG 388
RSTTAISVVAPV YAHLAA Q+S FL+ ++MS+ SSS GG
Sbjct: 3 RSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGG 122
Score = 54.2 bits (112), Expect(2) = 2e-021
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +2 / +3
Query: 371 SSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LM 478
+SS GG TSAG PVPE P LH V SSMFFC* +
Sbjct: 102 TSSSHGGLTSAGQTPVPEFPELHRNVCSSMFFC*CL 209
>gb|DT488774.1|DT488774 WS02537.B21_G04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_G04 3', mRNA sequence
Length = 635
Score = 75.8 bits (159), Expect(2) = 2e-021
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = -1 / +3
Query: 387 PPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TN 238
PPWLE+ S++SSN N AARWA* GATTEMAVVLLWYT E E T+
Sbjct: 486 PPWLEEVSEVSSNFINWPI*VAARWA*QIGATTEMAVVLLWYTYERECTS 635
Score = 46.4 bits (95), Expect(2) = 2e-021
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / +3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPP 385
QKN+EL T SC G+ GTG PAEV PP
Sbjct: 408 QKNIELQTFSCNLGNCGTGTAPAEVTPP 491
>gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B024P66 5', mRNA sequence
Length = 276
Score = 101 bits (215), Expect = 6e-021
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +2 / +3
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHS 250
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++
Sbjct: 105 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNN 275
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 420,125,760
Number of Sequences: 369679
Number of extensions: 6683431
Number of successful extensions: 53184
Number of sequences better than 1.0e-020: 56
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 9473018100
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)