TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 129373.2.1
(1297 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT497523.1|DT497523 WS01126.BR_L14 PT-P-FL-A-2 Populus t... 85 8e-044
gb|DV464906.1|DV464906 MTUNUL1.P32.D05 NUL Populus fremonti... 60 5e-041
gb|DT494587.1|DT494587 WS01118.BR.1_N19 PT-P-FL-A-2 Populus... 85 1e-038
gb|DT478676.1|DT478676 WS02523.BR_H18 PT-MB-N-A-15 Populus ... 93 2e-037
gb|DT496674.1|DT496674 WS01124.BR_B22 PT-P-FL-A-2 Populus t... 85 1e-035
gb|DT487229.1|DT487229 WS02533.B21_C03 PT-MB-N-A-15 Populus... 85 9e-034
gb|CV264033.1|CV264033 WS02023.B21_H02 PTxN-IB-N-A-11 Popul... 84 1e-033
gb|BU836094.1|BU836094 T082F03 Populus apical shoot cDNA li... 79 1e-033
gb|CV272630.1|CV272630 WS0158.B21_D14 PTxN-IB-A-6 Populus t... 83 2e-033
gb|DT487924.1|DT487924 WS02535.B21_A15 PT-MB-N-A-15 Populus... 83 2e-033
gb|CV247242.1|CV247242 WS01117.B21_I04 PT-P-FL-A-2 Populus ... 83 2e-033
gb|DT494130.1|DT494130 WS01117.BR_I04 PT-P-FL-A-2 Populus t... 83 2e-033
gb|DT486824.1|DT486824 WS02532.B21_A13 PT-MB-N-A-15 Populus... 82 7e-033
gb|DT493928.1|DT493928 WS01116.BR_O05 PT-P-FL-A-2 Populus t... 85 2e-032
gb|DT481849.1|DT481849 WS02533.BR_C03 PT-MB-N-A-15 Populus ... 85 2e-032
gb|CX178548.1|CX178548 D12_45-115_08.ab1 leaf inoculated wi... 93 2e-032
gb|DT497907.1|DT497907 WS0113.BR_M22 PT-P-FL-A-2 Populus tr... 93 2e-032
gb|CX180630.1|CX180630 C05_45-49_05.ab1 leaf inoculated wit... 93 2e-032
gb|CX186797.1|CX186797 C03_45-72_05.ab1 leaf inoculated wit... 90 2e-032
gb|DV463319.1|DV463319 MTUNUL1.P14.D07 NUL Populus fremonti... 84 6e-032
gb|DT513218.1|DT513218 WS02421.B21_H06 PTxD-ICC-N-A-14 Popu... 73 1e-030
gb|BU835401.1|BU835401 T073E05 Populus apical shoot cDNA li... 89 8e-030
gb|CX177323.1|CX177323 B05_69-52_03.ab1 leaf inoculated wit... 84 1e-029
gb|DV465905.1|DV465905 MTUNUL1.P44.F11 NUL Populus fremonti... 61 3e-029
gb|BU831131.1|BU831131 T017F05 Populus apical shoot cDNA li... 80 3e-029
gb|DT509685.1|DT509685 WS02424.BR_G17 PTxD-ICC-N-A-14 Popul... 83 8e-029
gb|DT508610.1|DT508610 WS02421.BR_H06 PTxD-ICC-N-A-14 Popul... 83 3e-028
gb|BU834199.1|BU834199 T058B09 Populus apical shoot cDNA li... 83 5e-028
gb|BU827648.1|BU827648 K006P45P Populus apical shoot cDNA l... 83 5e-028
gb|BI130765.1|BI130765 G110P49Y Populus cambium cDNA librar... 83 5e-028
gb|CV252775.1|CV252775 PX0015.B21_O24 PT-X-FL-A-1 Populus t... 85 6e-028
gb|DT494820.1|DT494820 WS01119.BR_I15 PT-P-FL-A-2 Populus t... 85 7e-028
gb|CV253085.1|CV253085 PX0019.B21_F09 PT-X-FL-A-1 Populus t... 85 1e-027
gb|DT493406.1|DT493406 WS0111.BR_E10 PT-P-FL-A-2 Populus tr... 85 1e-027
gb|DT493430.1|DT493430 WS0111.BR_F13 PT-P-FL-A-2 Populus tr... 85 1e-027
gb|DT500647.1|DT500647 PX0019.BR.1_F09 PT-X-FL-A-1 Populus ... 85 1e-027
gb|DT500587.1|DT500587 PX0015.BR_O24 PT-X-FL-A-1 Populus tr... 85 1e-027
gb|BU875611.1|BU875611 V009B10 Populus flower cDNA library ... 85 1e-027
gb|BU825847.1|BU825847 UK113TG06 Populus apical shoot cDNA ... 81 2e-027
gb|CX659244.1|CX659244 PO01028C04 Poplar SC cDNA library Po... 84 2e-027
gb|AJ778515.1|AJ778515 AJ778515 Populus euphratica cambium ... 64 6e-026
gb|DT519161.1|DT519161 WS02440.B21_H23 PTxD-ICC-N-A-14 Popu... 64 8e-026
gb|DT490520.1|DT490520 WS02545.B21_D01 PT-MB-N-A-15 Populus... 66 2e-023
gb|DT491555.1|DT491555 WS02548.C21_B08 PT-MB-N-A-15 Populus... 66 2e-023
gb|DV464398.1|DV464398 MTUNUL1.P27.A05 NUL Populus fremonti... 60 5e-023
gb|AI163944.1|AI163944 A051P70U Hybrid aspen plasmid librar... 58 7e-023
gb|BU885682.1|BU885682 R034F06 Populus root cDNA library Po... 69 1e-022
gb|CK116748.1|CK116748 B016P64 Hybrid aspen plasmid library... 68 2e-022
gb|AI165512.1|AI165512 A085P72U Hybrid aspen plasmid librar... 83 3e-022
gb|CV241477.1|CV241477 WS02512.B21_F05 PT-MB-N-A-15 Populus... 66 7e-022
gb|DV465809.1|DV465809 MTUNUL1.P43.D09 NUL Populus fremonti... 61 5e-021
gb|BU836017.1|BU836017 T081F09 Populus apical shoot cDNA li... 83 6e-021
>gb|DT497523.1|DT497523 WS01126.BR_L14 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01126_L14
5', mRNA sequence
Length = 918
Score = 84.9 bits (179), Expect(4) = 8e-044
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 207 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 386
Query: 901 P 899
P
Sbjct: 387 P 389
Score = 59.3 bits (123), Expect(4) = 8e-044
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +3
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 96 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 206
Score = 57.9 bits (120), Expect(4) = 8e-044
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = -1 / +3
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKH 284
P K A ++ + K+PKSGG+ CKSC ++F S+ AL++HS+AKH
Sbjct: 777 PHPAKGKAASNGNNPKTPKSGGNFSCKSCERSFGSDGALKSHSQAKH 917
Score = 39.6 bits (80), Expect(4) = 8e-044
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 672 KKRTSDSAIKTPVSSKKAKTATP 740
>gb|DV464906.1|DV464906 MTUNUL1.P32.D05 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 895
Score = 60.2 bits (125), Expect(6) = 5e-041
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = -1 / +3
Query: 1018 LSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQP 899
LS DK PQ+ FDLVF +EFELSH K SVFF GY+ P
Sbjct: 258 LSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIP 377
Score = 59.3 bits (123), Expect(6) = 5e-041
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +2
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 83 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 193
Score = 47.8 bits (98), Expect(6) = 5e-041
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -1 / +3
Query: 379 KSPKSGGSVPCKSCSKTFNSEMALQAHSK 293
K+PKSGG+ CKSC K+F S+ AL++HS+
Sbjct: 807 KTPKSGGNFSCKSCEKSFGSDGALKSHSQ 893
Score = 39.6 bits (80), Expect(6) = 5e-041
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 660 KKRTSDSAIKTPVSSKKAKTATP 728
Score = 33.6 bits (67), Expect(6) = 5e-041
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1 / +3
Query: 451 GATHVATPHPAKGKTPANNDKSTEKS 374
G TPHPAKGK +N + T KS
Sbjct: 744 GKAGQVTPHPAKGKAASNGNPKTPKS 821
Score = 26.7 bits (52), Expect(6) = 5e-041
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -1 / +2
Query: 1081 KKSDSALMYVKVDDKKLAIGT 1019
K ++S +++K D+KKL +GT
Sbjct: 194 KGNESVPLFLKFDEKKLVLGT 256
>gb|DT494587.1|DT494587 WS01118.BR.1_N19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_N19 5', mRNA sequence
Length = 881
Score = 84.9 bits (179), Expect(4) = 1e-038
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 205 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 384
Query: 901 P 899
P
Sbjct: 385 P 387
Score = 59.3 bits (123), Expect(4) = 1e-038
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 94 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 204
Score = 40.0 bits (81), Expect(4) = 1e-038
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1 / +1
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNS 320
P K A ++ + K+PKSGG+ CKSC ++F S
Sbjct: 775 PHPAKGKAASNGNNPKTPKSGGNFSCKSCERSFGS 879
Score = 39.6 bits (80), Expect(4) = 1e-038
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 670 KKRTSDSAIKTPVSSKKAKTATP 738
>gb|DT478676.1|DT478676 WS02523.BR_H18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_H18 5', mRNA sequence
Length = 780
Score = 93.2 bits (197), Expect(4) = 2e-037
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = -1 / +2
Query: 1087 ESKKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
+ K ++S ++V DD+KL +GTLS +K PQI FDLVF K+FELSH K SVFFSGYKV
Sbjct: 152 KDKGNESVCLFVNFDDQKLVLGTLSHEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKV 331
Query: 907 EQP 899
QP
Sbjct: 332 AQP 340
Score = 62.9 bits (131), Expect(4) = 2e-037
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -1 / +2
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
+MEFWG+EVK G ++ E G GFILH+SQA LGE+KK
Sbjct: 44 TMEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKK 154
Score = 40.0 bits (81), Expect(4) = 2e-037
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1 / +2
Query: 550 GKKRGAENALKTPLSDKKAKVATP 479
GKKR AE+A K P+ DKKAK TP
Sbjct: 698 GKKRSAESASKNPVPDKKAKFVTP 769
Score = 22.6 bits (43), Expect(4) = 2e-037
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 847 NIPVIKENGKGDGKEEQKNQEKA 779
++PV +NGK + K+ + E A
Sbjct: 380 DLPVPVDNGKEEAKQPKPENENA 448
>gb|DT496674.1|DT496674 WS01124.BR_B22 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01124_B22
5', mRNA sequence
Length = 858
Score = 84.9 bits (179), Expect(4) = 1e-035
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 202 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 381
Query: 901 P 899
P
Sbjct: 382 P 384
Score = 59.3 bits (123), Expect(4) = 1e-035
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 91 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 201
Score = 39.6 bits (80), Expect(4) = 1e-035
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 667 KKRTSDSAIKTPVSSKKAKTATP 735
Score = 29.9 bits (59), Expect(4) = 1e-035
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1 / +2
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKS 341
P K A ++ + K+PKSGG+ CKS
Sbjct: 773 PHPAKGKAASNGNNPKTPKSGGNFSCKS 856
>gb|DT487229.1|DT487229 WS02533.B21_C03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_C03 3', mRNA sequence
Length = 918
Score = 84.9 bits (179), Expect(3) = 9e-034
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / -1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 912 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 733
Query: 901 P 899
P
Sbjct: 732 P 730
Score = 63.8 bits (133), Expect(3) = 9e-034
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / -1
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGAK*V 269
P K A ++ + K+PKSGG+ CKSC ++F S+ AL++HS+AKHG K*+
Sbjct: 342 PHPAKGKAASNGNNPKTPKSGGNFSCKSCERSFGSDGALKSHSQAKHGDK*I 187
Score = 39.6 bits (80), Expect(3) = 9e-034
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 447 KKRTSDSAIKTPVSSKKAKTATP 379
>gb|CV264033.1|CV264033 WS02023.B21_H02 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02023_H02 3', mRNA sequence
Length = 914
Score = 84.0 bits (177), Expect(3) = 1e-033
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = -1 / -3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
K+++S ++VK D+KKL +GTLS + PQ+ FDLVF KEFELSH K SVFF GY+V
Sbjct: 906 KENESVPLFVKFDEKKLVLGTLSPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV 733
Score = 66.1 bits (138), Expect(3) = 1e-033
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -1 / -3
Query: 466 TGGKKGATHVATPHPAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAK 287
T K A P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS+AK
Sbjct: 387 TPQKTDAKKAGQVTPHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 208
Query: 286 HGAK* 272
HGAK*
Sbjct: 207 HGAK* 193
Score = 37.7 bits (76), Expect(3) = 1e-033
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 450 KKRANDSATKTPVSSKKAKTATP 382
>gb|BU836094.1|BU836094 T082F03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 716
Score = 79.0 bits (166), Expect(4) = 1e-033
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = -1 / +2
Query: 1069 SALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQP 899
S +++K+D+K+L +GTLS +K PQ+ FDLVF +EFELSH K SVFF GY+ P
Sbjct: 2 SVPLFLKLDEKRLVLGTLSPEKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIP 172
Score = 58.3 bits (121), Expect(4) = 1e-033
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = -1 / +2
Query: 379 KSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGAK*V 269
K+PKSGG+ CKSC ++F S+ AL++HS+AKH K*+
Sbjct: 602 KTPKSGGNFSCKSCERSFGSDGALKSHSQAKHAGK*I 712
Score = 34.5 bits (69), Expect(4) = 1e-033
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
+KR ++A+KTP+S KKAK TP
Sbjct: 455 EKRTNDSAIKTPVSSKKAKTVTP 523
Score = 33.6 bits (67), Expect(4) = 1e-033
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1 / +2
Query: 451 GATHVATPHPAKGKTPANNDKSTEKS 374
G TPHPAKGK +N + T KS
Sbjct: 539 GKAGQVTPHPAKGKAASNGNPKTPKS 616
>gb|CV272630.1|CV272630 WS0158.B21_D14 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_D14 3', mRNA sequence
Length = 893
Score = 82.6 bits (174), Expect(3) = 2e-033
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = -1 / -3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
K ++S ++VK D+KKL +GTLS + PQ+ FDLVF KEFELSH K SVFF GY+V
Sbjct: 885 KGNESVPLFVKFDEKKLVLGTLSPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV 712
Score = 66.1 bits (138), Expect(3) = 2e-033
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -1 / -3
Query: 466 TGGKKGATHVATPHPAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAK 287
T K A P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS+AK
Sbjct: 366 TPQKTDAKKAGQVTPHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 187
Query: 286 HGAK* 272
HGAK*
Sbjct: 186 HGAK* 172
Score = 38.6 bits (78), Expect(3) = 2e-033
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 429 KKRATDSATKTPVSSKKAKTATP 361
>gb|DT487924.1|DT487924 WS02535.B21_A15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_A15 3', mRNA sequence
Length = 898
Score = 82.6 bits (174), Expect(3) = 2e-033
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = -1 / -3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
K ++S ++VK D+KKL +GTLS + PQ+ FDLVF KEFELSH K SVFF GY+V
Sbjct: 890 KGNESVPLFVKFDEKKLVLGTLSPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV 717
Score = 66.1 bits (138), Expect(3) = 2e-033
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -1 / -3
Query: 466 TGGKKGATHVATPHPAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAK 287
T K A P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS+AK
Sbjct: 371 TPQKTDAKKAGQVTPHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 192
Query: 286 HGAK* 272
HGAK*
Sbjct: 191 HGAK* 177
Score = 38.6 bits (78), Expect(3) = 2e-033
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 434 KKRATDSATKTPVSSKKAKTATP 366
>gb|CV247242.1|CV247242 WS01117.B21_I04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_I04 3', mRNA sequence
Length = 924
Score = 82.6 bits (174), Expect(3) = 2e-033
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = -1 / -3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
K ++S ++VK D+KKL +GTLS + PQ+ FDLVF KEFELSH K SVFF GY+V
Sbjct: 883 KGNESVPLFVKFDEKKLVLGTLSPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV 710
Score = 65.7 bits (137), Expect(3) = 2e-033
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = -1 / -3
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGAK* 272
P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS+AKHGAK*
Sbjct: 322 PHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAKHGAK* 170
Score = 38.6 bits (78), Expect(3) = 2e-033
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 427 KKRATDSATKTPVSSKKAKTATP 359
>gb|DT494130.1|DT494130 WS01117.BR_I04 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01117_I04
5', mRNA sequence
Length = 934
Score = 82.6 bits (174), Expect(3) = 2e-033
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = -1 / +3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
K ++S ++VK D+KKL +GTLS + PQ+ FDLVF KEFELSH K SVFF GY+V
Sbjct: 204 KGNESVPLFVKFDEKKLVLGTLSPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV 377
Score = 65.7 bits (137), Expect(3) = 2e-033
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGAK* 272
P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS+AKHGAK*
Sbjct: 765 PHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAKHGAK* 917
Score = 48.7 bits (100), Expect(4) = 3e-023
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +3 / -1
Query: 273 HLAPCFALE*ACRAISLLNVLLHDLQGTDPPDFGDFSV 386
HLAPC A E* RA S+ N L DLQ PPDFGD +
Sbjct: 916 HLAPCLACE*DFRAPSVPNALSQDLQEKLPPDFGDLEL 803
Score = 48.3 bits (99), Expect(4) = 3e-023
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +3 / -1
Query: 909 TL*PEKNTLVVFDVCDSSNSLLKTKSNCICGYLSIESVPMASFLSSTLT 1055
T *P+K TL F + +SSNS KTKS G S E VP SF SS LT
Sbjct: 376 TW*PQKKTLPFFQL*ESSNSFSKTKSKDN*GMFSGERVPNTSFFSSNLT 230
Score = 42.8 bits (87), Expect(4) = 3e-023
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3 / -1
Query: 1077 FFDSPRAAWETCRIKPCPGSHLTVDPGLTSRPQNSID 1187
FFDSPRAA + ++ GS L P LTS PQNS+D
Sbjct: 205 FFDSPRAA*DRWIMQKSLGSTLRGSPALTSTPQNSMD 95
Score = 38.6 bits (78), Expect(3) = 2e-033
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / +3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 660 KKRATDSATKTPVSSKKAKTATP 728
Score = 31.3 bits (62), Expect(4) = 3e-023
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3 / -1
Query: 480 GVATFAFLSERGVFRAFSAPLFL 548
GVA FAF + GVF A S LFL
Sbjct: 727 GVAVFAFFEDTGVFVAESVALFL 659
>gb|DT486824.1|DT486824 WS02532.B21_A13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_A13 3', mRNA sequence
Length = 867
Score = 81.7 bits (172), Expect(3) = 7e-033
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = -1 / -2
Query: 1060 MYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQP 899
+++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+ P
Sbjct: 860 LFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIP 699
Score = 63.8 bits (133), Expect(3) = 7e-033
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / -2
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGAK*V 269
P K A ++ + K+PKSGG+ CKSC ++F S+ AL++HS+AKHG K*+
Sbjct: 311 PHPAKGKAASNGNNPKTPKSGGNFSCKSCERSFGSDGALKSHSQAKHGDK*I 156
Score = 39.6 bits (80), Expect(3) = 7e-033
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 416 KKRTSDSAIKTPVSSKKAKTATP 348
>gb|DT493928.1|DT493928 WS01116.BR_O05 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01116_O05
5', mRNA sequence
Length = 783
Score = 84.9 bits (179), Expect(3) = 2e-032
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 202 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 381
Query: 901 P 899
P
Sbjct: 382 P 384
Score = 59.3 bits (123), Expect(3) = 2e-032
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 91 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 201
Score = 39.6 bits (80), Expect(3) = 2e-032
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 667 KKRTSDSAIKTPVSSKKAKTATP 735
>gb|DT481849.1|DT481849 WS02533.BR_C03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_C03 5', mRNA sequence
Length = 804
Score = 84.9 bits (179), Expect(3) = 2e-032
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 270 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 449
Query: 901 P 899
P
Sbjct: 450 P 452
Score = 59.3 bits (123), Expect(3) = 2e-032
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +3
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 159 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 269
Score = 39.6 bits (80), Expect(3) = 2e-032
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 735 KKRTSDSAIKTPVSSKKAKTATP 803
>gb|CX178548.1|CX178548 D12_45-115_08.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 741
Score = 93.2 bits (197), Expect(3) = 2e-032
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = -1 / +2
Query: 1087 ESKKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
+ K ++S ++V DD+KL +GTLS +K PQI FDLVF K+FELSH K SVFFSGYKV
Sbjct: 221 KDKGNESVCLFVNFDDQKLVLGTLSHEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKV 400
Query: 907 EQP 899
QP
Sbjct: 401 AQP 409
Score = 62.9 bits (131), Expect(3) = 2e-032
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -1 / +2
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
+MEFWG+EVK G ++ E G GFILH+SQA LGE+KK
Sbjct: 113 TMEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKK 223
Score = 22.1 bits (42), Expect(3) = 2e-032
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 847 NIPVIKENGKGDGKEEQKNQEKA 779
++PV +NGK + K+ + E A
Sbjct: 449 DLPVPVDNGKEEAKKPKPENENA 517
>gb|DT497907.1|DT497907 WS0113.BR_M22 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0113_M22
5', mRNA sequence
Length = 681
Score = 93.2 bits (197), Expect(3) = 2e-032
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = -1 / +3
Query: 1087 ESKKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
+ K ++S ++V DD+KL +GTLS +K PQI FDLVF K+FELSH K SVFFSGYKV
Sbjct: 231 KDKGNESVCLFVNFDDQKLVLGTLSHEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKV 410
Query: 907 EQP 899
QP
Sbjct: 411 AQP 419
Score = 62.5 bits (130), Expect(3) = 2e-032
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = -1 / +3
Query: 1183 MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
MEFWG+EVK G ++ E G GFILH+SQA LGE+KK
Sbjct: 126 MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKK 233
Score = 22.6 bits (43), Expect(3) = 2e-032
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 847 NIPVIKENGKGDGKEEQKNQEKA 779
++PV +NGK + K+ + E A
Sbjct: 459 DLPVPVDNGKEEAKQPKPENENA 527
>gb|CX180630.1|CX180630 C05_45-49_05.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 632
Score = 93.2 bits (197), Expect(3) = 2e-032
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = -1 / +2
Query: 1087 ESKKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
+ K ++S ++V DD+KL +GTLS +K PQI FDLVF K+FELSH K SVFFSGYKV
Sbjct: 221 KDKGNESVCLFVNFDDQKLVLGTLSHEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKV 400
Query: 907 EQP 899
QP
Sbjct: 401 AQP 409
Score = 62.9 bits (131), Expect(3) = 2e-032
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -1 / +2
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
+MEFWG+EVK G ++ E G GFILH+SQA LGE+KK
Sbjct: 113 TMEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKK 223
Score = 22.1 bits (42), Expect(3) = 2e-032
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 847 NIPVIKENGKGDGKEEQKNQEKA 779
++PV +NGK + K+ + E A
Sbjct: 449 DLPVPVDNGKEEAKKPKPENENA 517
>gb|CX186797.1|CX186797 C03_45-72_05.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 589
Score = 90.0 bits (190), Expect(3) = 2e-032
Identities = 37/63 (58%), Positives = 46/63 (73%)
Frame = -1 / +3
Query: 1087 ESKKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
+ K ++S ++V DD+KL +GTLS +K PQI FDL F K+FELSH K SVFFSGYKV
Sbjct: 180 KDKGNESVCLFVNFDDQKLVLGTLSHEKIPQIPFDLGFEKDFELSHNLKNGSVFFSGYKV 359
Query: 907 EQP 899
QP
Sbjct: 360 AQP 368
Score = 62.9 bits (131), Expect(3) = 2e-032
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -1 / +3
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
+MEFWG+EVK G ++ E G GFILH+SQA LGE+KK
Sbjct: 72 TMEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKK 182
Score = 24.9 bits (48), Expect(3) = 2e-032
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 847 NIPVIKENGKGDGKEEQKNQEKA 779
++PV +NGK +GK+ + E A
Sbjct: 408 DLPVPVDNGKEEGKKPKPENENA 476
>gb|DV463319.1|DV463319 MTUNUL1.P14.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 747
Score = 84.0 bits (177), Expect(3) = 6e-032
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = -1 / +3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 204 KGNESVPLFLKFDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 383
Query: 901 P 899
P
Sbjct: 384 P 386
Score = 59.3 bits (123), Expect(3) = 6e-032
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +3
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 93 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 203
Score = 38.2 bits (77), Expect(3) = 6e-032
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S K+AK ATP
Sbjct: 669 KKRTSDSAIKTPVSSKRAKTATP 737
>gb|DT513218.1|DT513218 WS02421.B21_H06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02421_H06 3', mRNA sequence
Length = 879
Score = 73.5 bits (154), Expect(3) = 1e-030
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = -1 / -1
Query: 1045 DDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
D+KKL +GTLS + PQ+ FDLVF KEFELSH K SVFF GY+V
Sbjct: 879 DEKKLVLGTLSPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV 742
Score = 65.7 bits (137), Expect(3) = 1e-030
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = -1 / -1
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGAK* 272
P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS+AKHGAK*
Sbjct: 354 PHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAKHGAK* 202
Score = 38.6 bits (78), Expect(3) = 1e-030
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -1
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 459 KKRATDSATKTPVSSKKAKTATP 391
>gb|BU835401.1|BU835401 T073E05 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 411
Score = 88.6 bits (187), Expect(2) = 8e-030
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = -1 / +1
Query: 1087 ESKKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
+ K +++ ++V DD+KL +GTLS +K PQI FDLVF K+FELSH K SVFFSGYKV
Sbjct: 226 KDKGNETVCLFVNFDDQKLVLGTLSHEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKV 405
Query: 907 EQ 902
Q
Sbjct: 406 AQ 411
Score = 62.9 bits (131), Expect(2) = 8e-030
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
+MEFWG+EVK G ++ E G GFILH+SQA LGE+KK
Sbjct: 118 TMEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKK 228
>gb|CX177323.1|CX177323 B05_69-52_03.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 700
Score = 84.0 bits (177), Expect(3) = 1e-029
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = -1 / +3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 132 KGNESVPLFLKFDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 311
Query: 901 P 899
P
Sbjct: 312 P 314
Score = 50.1 bits (103), Expect(3) = 1e-029
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -1 / +3
Query: 1174 WGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
WG+EVK G +K EP +++H+SQAALGES K
Sbjct: 33 WGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 131
Score = 39.6 bits (80), Expect(3) = 1e-029
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 597 KKRTSDSAIKTPVSSKKAKTATP 665
>gb|DV465905.1|DV465905 MTUNUL1.P44.F11 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 867
Score = 61.1 bits (127), Expect(4) = 3e-029
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = -1 / +2
Query: 1039 KKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
+ L G LS + PQ+ FDLVF KEFELSH K SVFF GY+V
Sbjct: 263 RSLCWGPLSPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV 394
Score = 60.6 bits (126), Expect(4) = 3e-029
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = -1 / +1
Query: 1204 VSAPPPSMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKKSDSALMYVKVDDKK 1034
+S+ SMEFWG+EVK G +K EP ++H+SQAALGESKK ++ D+K
Sbjct: 94 LSSTMSSMEFWGVEVKAGEPLKVEPKDFRMIHLSQAALGESKKGHESVPLFVKFDEK 264
Score = 38.6 bits (78), Expect(4) = 3e-029
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 677 KKRATDSATKTPVSSKKAKTATP 745
Score = 31.3 bits (62), Expect(4) = 3e-029
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1 / +2
Query: 466 TGGKKGATHVATPHPAKGKTPANNDKSTEKSPKSGGSVPCKS 341
T K A P K A + ++ KSPKSGG+ CKS
Sbjct: 740 TPQKTDAKKAGQVTPHPAKGKAAANGNSSKSPKSGGNFSCKS 865
>gb|BU831131.1|BU831131 T017F05 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 522
Score = 80.3 bits (169), Expect(3) = 3e-029
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = -1 / +2
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS +K PQ+ FDLVF +EFELSH K SV F GY+
Sbjct: 185 KGNESVPLFLKLDEKKLVLGTLSPEKIPQLSFDLVFEREFELSHNWKNGSVLFCGYQAAI 364
Query: 901 P 899
P
Sbjct: 365 P 367
Score = 62.5 bits (130), Expect(3) = 3e-029
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1 / +2
Query: 1225 PSSHSIFVSAPPPSMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
P +H +S SMEFWG+EVK G +K EP +++H+SQAALG+S K
Sbjct: 35 PKTH*TLLSLNMSSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGQSSK 184
Score = 28.6 bits (56), Expect(3) = 3e-029
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1 / +3
Query: 547 KKRGAENALKTPLSDKKAK 491
K R ++A+KTP+S KKAK
Sbjct: 459 KNRTNDSAIKTPVSSKKAK 515
>gb|DT509685.1|DT509685 WS02424.BR_G17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_G17 5', mRNA sequence
Length = 863
Score = 82.6 bits (174), Expect(3) = 8e-029
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = -1 / +3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
K ++S ++VK D+KKL +GTLS + PQ+ FDLVF KEFELSH K SVFF GY+V
Sbjct: 174 KGNESVPLFVKFDEKKLVLGTLSPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV 347
Score = 50.1 bits (103), Expect(3) = 8e-029
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = -1 / +3
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHS 296
P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS
Sbjct: 735 PHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHS 863
Score = 38.6 bits (78), Expect(3) = 8e-029
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / +3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 630 KKRATDSATKTPVSSKKAKTATP 698
>gb|DT508610.1|DT508610 WS02421.BR_H06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02421_H06 5', mRNA sequence
Length = 860
Score = 82.6 bits (174), Expect(3) = 3e-028
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
K ++S ++VK D+KKL +GTLS + PQ+ FDLVF KEFELSH K SVFF GY+V
Sbjct: 172 KGNESVPLFVKFDEKKLVLGTLSPENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQV 345
Score = 48.3 bits (99), Expect(3) = 3e-028
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = -1 / +1
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAH 299
P K A + ++ KSPKSGG+ CKSC K F ++ AL++H
Sbjct: 733 PHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSH 858
Score = 38.6 bits (78), Expect(3) = 3e-028
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / +1
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 628 KKRATDSATKTPVSSKKAKTATP 696
>gb|BU834199.1|BU834199 T058B09 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 548
Score = 83.1 bits (175), Expect(2) = 5e-028
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = -1 / +3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS +K PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 186 KGNESVPLFLKLDEKKLVLGTLSPEKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 365
Query: 901 P 899
P
Sbjct: 366 P 368
Score = 62.5 bits (130), Expect(2) = 5e-028
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1 / +3
Query: 1225 PSSHSIFVSAPPPSMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
P +H +S SMEFWG+EVK G +K EP +++H+SQAALG+S K
Sbjct: 36 PKTH*TLLSLNMSSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGQSSK 185
>gb|BU827648.1|BU827648 K006P45P Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 512
Score = 83.1 bits (175), Expect(2) = 5e-028
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = -1 / +3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS +K PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 186 KGNESVPLFLKLDEKKLVLGTLSPEKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 365
Query: 901 P 899
P
Sbjct: 366 P 368
Score = 62.5 bits (130), Expect(2) = 5e-028
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1 / +3
Query: 1225 PSSHSIFVSAPPPSMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
P +H +S SMEFWG+EVK G +K EP +++H+SQAALG+S K
Sbjct: 36 PKTH*TLLSLNMSSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGQSSK 185
>gb|BI130765.1|BI130765 G110P49Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 511
Score = 83.1 bits (175), Expect(2) = 5e-028
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS +K PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 265 KGNESVPLFLKLDEKKLVLGTLSPEKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 444
Query: 901 P 899
P
Sbjct: 445 P 447
Score = 62.5 bits (130), Expect(2) = 5e-028
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1 / +1
Query: 1225 PSSHSIFVSAPPPSMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
P +H +S SMEFWG+EVK G +K EP +++H+SQAALG+S K
Sbjct: 115 PKTH*TLLSLNMSSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGQSSK 264
>gb|CV252775.1|CV252775 PX0015.B21_O24 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_O24
3', mRNA sequence
Length = 684
Score = 84.9 bits (179), Expect(3) = 6e-028
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / -3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 508 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 329
Query: 901 P 899
P
Sbjct: 328 P 326
Score = 59.3 bits (123), Expect(3) = 6e-028
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / -3
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 619 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 509
Score = 23.5 bits (45), Expect(3) = 6e-028
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 547 KKRGAENALKTPLS 506
KKR +++A+KTP+S
Sbjct: 43 KKRTSDSAIKTPVS 2
>gb|DT494820.1|DT494820 WS01119.BR_I15 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01119_I15
5', mRNA sequence
Length = 713
Score = 84.9 bits (179), Expect(3) = 7e-028
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 202 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 381
Query: 901 P 899
P
Sbjct: 382 P 384
Score = 59.3 bits (123), Expect(3) = 7e-028
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 91 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 201
Score = 23.5 bits (45), Expect(3) = 7e-028
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 547 KKRGAENALKTPLS 506
KKR +++A+KTP+S
Sbjct: 667 KKRTSDSAIKTPVS 708
>gb|CV253085.1|CV253085 PX0019.B21_F09 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_F09
3', mRNA sequence
Length = 694
Score = 84.9 bits (179), Expect(2) = 1e-027
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / -2
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 507 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 328
Query: 901 P 899
P
Sbjct: 327 P 325
Score = 59.3 bits (123), Expect(2) = 1e-027
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / -2
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 618 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 508
>gb|DT493406.1|DT493406 WS0111.BR_E10 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_E10
5', mRNA sequence
Length = 684
Score = 84.9 bits (179), Expect(2) = 1e-027
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 325 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 504
Query: 901 P 899
P
Sbjct: 505 P 507
Score = 59.3 bits (123), Expect(2) = 1e-027
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 214 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 324
>gb|DT493430.1|DT493430 WS0111.BR_F13 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_F13
5', mRNA sequence
Length = 600
Score = 84.9 bits (179), Expect(2) = 1e-027
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 202 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 381
Query: 901 P 899
P
Sbjct: 382 P 384
Score = 59.3 bits (123), Expect(2) = 1e-027
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 91 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 201
>gb|DT500647.1|DT500647 PX0019.BR.1_F09 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_F09
5', mRNA sequence
Length = 601
Score = 84.9 bits (179), Expect(2) = 1e-027
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 202 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 381
Query: 901 P 899
P
Sbjct: 382 P 384
Score = 59.3 bits (123), Expect(2) = 1e-027
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 91 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 201
>gb|DT500587.1|DT500587 PX0015.BR_O24 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_O24
5', mRNA sequence
Length = 570
Score = 84.9 bits (179), Expect(2) = 1e-027
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 202 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 381
Query: 901 P 899
P
Sbjct: 382 P 384
Score = 59.3 bits (123), Expect(2) = 1e-027
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 91 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 201
>gb|BU875611.1|BU875611 V009B10 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 561
Score = 84.9 bits (179), Expect(2) = 1e-027
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -1 / +3
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K+D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 171 KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 350
Query: 901 P 899
P
Sbjct: 351 P 353
Score = 59.3 bits (123), Expect(2) = 1e-027
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +3
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 60 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 170
>gb|BU825847.1|BU825847 UK113TG06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 517
Score = 81.3 bits (171), Expect(2) = 2e-027
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = -1 / +2
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K D+KKL +GTLS +K PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 200 KGNESVPLFLKWDEKKLVLGTLSPEKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 379
Query: 901 P 899
P
Sbjct: 380 P 382
Score = 62.5 bits (130), Expect(2) = 2e-027
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1 / +2
Query: 1225 PSSHSIFVSAPPPSMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
P +H +S SMEFWG+EVK G +K EP +++H+SQAALG+S K
Sbjct: 50 PKTH*TLLSLNMSSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGQSSK 199
>gb|CX659244.1|CX659244 PO01028C04 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO01028C04 5', mRNA sequence
Length = 631
Score = 84.0 bits (177), Expect(2) = 2e-027
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = -1 / +1
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQ 902
K ++S +++K D+KKL +GTLS DK PQ+ FDLVF +EFELSH K SVFF GY+
Sbjct: 175 KGNESVPLFLKFDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAI 354
Query: 901 P 899
P
Sbjct: 355 P 357
Score = 59.3 bits (123), Expect(2) = 2e-027
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +1
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 64 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 174
>gb|AJ778515.1|AJ778515 AJ778515 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600002A06F1, mRNA sequence
Length = 727
Score = 63.8 bits (133), Expect(4) = 6e-026
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -1 / +1
Query: 1000 PQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQP 899
PQI FDLVF K+FELSH K SVFFSGYKV QP
Sbjct: 7 PQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQP 108
Score = 51.9 bits (107), Expect(4) = 6e-026
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = -1 / +1
Query: 445 THVATPHPAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGA 278
T V P K A ++++ ++ S C SC+++F SE ALQ+HSKAKH A
Sbjct: 559 TGVHIATPHPSKQAAKTSANSQRKEQAQKSFSCSSCNRSFGSENALQSHSKAKHSA 726
Score = 40.9 bits (83), Expect(4) = 6e-026
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -1 / +1
Query: 550 GKKRGAENALKTPLSDKKAKVATP 479
GKKR AE+A K P++DKKAK TP
Sbjct: 466 GKKRSAESASKNPVTDKKAKFVTP 537
Score = 22.6 bits (43), Expect(4) = 6e-026
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1 / +1
Query: 847 NIPVIKENGKGDGKEEQKNQEKA 779
++PV +NGK + K+ + E A
Sbjct: 148 DLPVPVDNGKKEAKQPKPENENA 216
>gb|DT519161.1|DT519161 WS02440.B21_H23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02440_H23 3', mRNA sequence
Length = 911
Score = 63.8 bits (133), Expect(3) = 8e-026
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -1 / -1
Query: 424 PAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGAK*V 269
P K A ++ + K+PKSGG+ CKSC ++F S+ AL++HS+AKHG K*+
Sbjct: 410 PHPAKGKAASNGNNPKTPKSGGNFSCKSCERSFGSDGALKSHSQAKHGDK*I 255
Score = 57.9 bits (120), Expect(3) = 8e-026
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -1 / -1
Query: 1009 DKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQP 899
DK PQ+ FDLVF +EFELSH K SVFF GY+ P
Sbjct: 908 DKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIP 798
Score = 39.6 bits (80), Expect(3) = 8e-026
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR +++A+KTP+S KKAK ATP
Sbjct: 515 KKRTSDSAIKTPVSSKKAKTATP 447
>gb|DT490520.1|DT490520 WS02545.B21_D01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02545_D01 3', mRNA sequence
Length = 793
Score = 66.1 bits (138), Expect(3) = 2e-023
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -1 / -2
Query: 466 TGGKKGATHVATPHPAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAK 287
T K A P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS+AK
Sbjct: 366 TPQKTDAKKAGQVTPHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 187
Query: 286 HGAK* 272
HGAK*
Sbjct: 186 HGAK* 172
Score = 48.3 bits (99), Expect(3) = 2e-023
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -1 / -2
Query: 988 FDLVFNKEFELSHTSKTTSVFFSGYKV 908
FDLVF KEFELSH K SVFF GY+V
Sbjct: 792 FDLVFEKEFELSHNWKKGSVFFCGYQV 712
Score = 38.6 bits (78), Expect(3) = 2e-023
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -2
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 429 KKRATDSATKTPVSSKKAKTATP 361
>gb|DT491555.1|DT491555 WS02548.C21_B08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02548_B08 3', mRNA sequence
Length = 824
Score = 66.1 bits (138), Expect(3) = 2e-023
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -1 / -3
Query: 466 TGGKKGATHVATPHPAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAK 287
T K A P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS+AK
Sbjct: 396 TPQKTDAKKAGQVTPHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 217
Query: 286 HGAK* 272
HGAK*
Sbjct: 216 HGAK* 202
Score = 48.3 bits (99), Expect(3) = 2e-023
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -1 / -3
Query: 988 FDLVFNKEFELSHTSKTTSVFFSGYKV 908
FDLVF KEFELSH K SVFF GY+V
Sbjct: 822 FDLVFEKEFELSHNWKKGSVFFCGYQV 742
Score = 38.6 bits (78), Expect(3) = 2e-023
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 459 KKRATDSATKTPVSSKKAKTATP 391
>gb|DV464398.1|DV464398 MTUNUL1.P27.A05 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 729
Score = 60.2 bits (125), Expect(3) = 5e-023
Identities = 25/40 (62%), Positives = 28/40 (70%)
Frame = -1 / +3
Query: 1018 LSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQP 899
LS DK PQ+ FDLVF +EFELSH K SVFF GY+ P
Sbjct: 396 LSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIP 515
Score = 59.3 bits (123), Expect(3) = 5e-023
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -1 / +2
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
SMEFWG+EVK G +K EP +++H+SQAALGES K
Sbjct: 221 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSK 331
Score = 26.7 bits (52), Expect(3) = 5e-023
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -1 / +2
Query: 1081 KKSDSALMYVKVDDKKLAIGT 1019
K ++S +++K D+KKL +GT
Sbjct: 332 KGNESVPLFLKFDEKKLVLGT 394
>gb|AI163944.1|AI163944 A051P70U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 417
Score = 58.3 bits (121), Expect(3) = 7e-023
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = -1 / +2
Query: 1000 PQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQP 899
P FDLVF K+FELSH K SVFFSGYKV QP
Sbjct: 245 PSKPFDLVFEKDFELSHNLKNGSVFFSGYKVAQP 346
Score = 51.0 bits (105), Expect(3) = 7e-023
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -1 / +2
Query: 1186 SMEFWGLEVKPGSTVKCEPGHGFILHVSQA 1097
+MEFWG+EVK G ++ E G GFILH+SQA
Sbjct: 50 TMEFWGVEVKGGEPLRVESGDGFILHLSQA 139
Score = 36.3 bits (73), Expect(3) = 7e-023
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -1 / +3
Query: 1087 ESKKSDSALMYVKVDDKKLAIGTLSIDKYPQ 995
+ K +++ ++V DD+KL +GTLS +K PQ
Sbjct: 159 KDKGNETVCLFVNFDDQKLVLGTLSHEKIPQ 251
>gb|BU885682.1|BU885682 R034F06 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 689
Score = 69.3 bits (145), Expect(4) = 1e-022
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = -1 / +1
Query: 1057 YVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQP 899
+ KV K+ +GTLS +K PQ+ FDLVF +EFELSH K SVFF GY+ P
Sbjct: 106 FPKVG*KEACVGTLSPEKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIP 264
Score = 36.3 bits (73), Expect(4) = 1e-022
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1 / +1
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A+KTP+S KKAK TP
Sbjct: 547 KKRTNDSAIKTPVSSKKAKTVTP 615
Score = 34.5 bits (69), Expect(4) = 1e-022
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1 / +2
Query: 1153 GSTVKCEPGHGFILHVSQAALGESKK 1076
G +K EP +++H+SQAALG+S K
Sbjct: 5 GEPLKVEPKDFYMIHLSQAALGQSSK 82
Score = 27.6 bits (54), Expect(4) = 1e-022
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1 / +1
Query: 451 GATHVATPHPAKGKTPAN 398
G TPHPAKGK +N
Sbjct: 631 GKAGQVTPHPAKGKAASN 684
>gb|CK116748.1|CK116748 B016P64 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B016P64 5', mRNA sequence
Length = 416
Score = 67.5 bits (141), Expect(2) = 2e-022
Identities = 26/47 (55%), Positives = 37/47 (78%)
Frame = -1 / +2
Query: 1081 KKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSK 941
K ++S +++K+D+KKL +GTLS +K PQ+ FDLVF +EFELSH K
Sbjct: 149 KGNESVPLFLKLDEKKLVLGTLSPEKIPQLSFDLVFEREFELSHNWK 289
Score = 59.3 bits (123), Expect(2) = 2e-022
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = -1 / +2
Query: 1219 SHSIFVSAPPPSMEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK 1076
+H +S SMEFWG+EVK G +K EP +++H+SQAALG+S K
Sbjct: 5 TH*TLLSLNMSSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGQSSK 148
>gb|AI165512.1|AI165512 A085P72U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 309
Score = 83.1 bits (175), Expect(2) = 3e-022
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = -1 / +2
Query: 1087 ESKKSDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKV 908
+ K +++ ++V DD+KL +GTLS +K PQI FDLVF K+ ELSH K SVFFSGYK
Sbjct: 83 KDKGNETVCLFVNFDDQKLVLGTLSHEKIPQIPFDLVFEKDXELSHNLKNGSVFFSGYKX 262
Query: 907 EQP 899
P
Sbjct: 263 LNP 271
Score = 42.8 bits (87), Expect(2) = 3e-022
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -1 / +2
Query: 1159 KPGSTVKCEPGHGFILHVSQAALGESKK 1076
K G ++ E G GFILH+SQA LGE+KK
Sbjct: 2 KGGEPLRVESGDGFILHLSQACLGEAKK 85
>gb|CV241477.1|CV241477 WS02512.B21_F05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02512_F05 3', mRNA sequence
Length = 791
Score = 66.1 bits (138), Expect(3) = 7e-022
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -1 / -3
Query: 466 TGGKKGATHVATPHPAKGKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAK 287
T K A P K A + ++ KSPKSGG+ CKSC K F ++ AL++HS+AK
Sbjct: 366 TPQKTDAKKAGQVTPHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 187
Query: 286 HGAK* 272
HGAK*
Sbjct: 186 HGAK* 172
Score = 42.8 bits (87), Expect(3) = 7e-022
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 982 LVFNKEFELSHTSKTTSVFFSGYKV 908
LVF KEFELSH K SVFF GY+V
Sbjct: 786 LVFEKEFELSHNWKKGSVFFCGYQV 712
Score = 38.6 bits (78), Expect(3) = 7e-022
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / -3
Query: 547 KKRGAENALKTPLSDKKAKVATP 479
KKR ++A KTP+S KKAK ATP
Sbjct: 429 KKRATDSATKTPVSSKKAKTATP 361
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 617,336,338
Number of Sequences: 369679
Number of extensions: 9763317
Number of successful extensions: 57560
Number of sequences better than 1.0e-020: 54
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 18223342578
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)