TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH22b04.yg.2.1
(457 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR689458.1|DR689458 EST1079544 Normalized pine embryo li... 307 4e-083
gb|DT635537.1|DT635537 EST1150468 Normalized pine embryo li... 307 4e-083
gb|CV034050.1|CV034050 RTNACL1_38_G01.b1_A029 Roots plus ad... 306 5e-083
gb|DR018819.1|DR018819 STRS1_25_H09.g1_A034 Shoot tip pitch... 306 5e-083
gb|BX250464.1|BX250464 BX250464 Pinus pinaster differenciat... 291 3e-078
gb|DR683825.1|DR683825 EST1073901 Normalized pine embryo li... 291 3e-078
gb|DT631716.1|DT631716 EST1146647 Normalized pine embryo li... 291 3e-078
gb|CV034119.1|CV034119 RTNACL1_38_G01.g1_A029 Roots plus ad... 272 8e-073
gb|DR060775.1|DR060775 RTNIT1_30_A04.b1_A029 Roots minus ni... 220 6e-057
gb|DR049929.1|DR049929 RTBOR1_20_C02.b1_A029 Roots plus add... 191 3e-048
gb|DR693421.1|DR693421 EST1083509 Normalized pine embryo li... 190 6e-048
gb|DT637931.1|DT637931 EST1152862 Normalized pine embryo li... 190 6e-048
gb|DR687924.1|DR687924 EST1078007 Normalized pine embryo li... 187 4e-047
gb|DT634529.1|DT634529 EST1149460 Normalized pine embryo li... 187 4e-047
gb|AW869853.1|AW869853 NXNV_122_C07_F Nsf Xylem Normal wood... 186 1e-046
gb|DR117407.1|DR117407 RTMG1_6_F10.g1_A029 Roots minus magn... 171 3e-042
gb|DR684550.1|DR684550 EST1074627 Normalized pine embryo li... 160 4e-039
gb|DR049360.1|DR049360 RTBOR1_15_H05.g1_A029 Roots plus add... 143 7e-034
gb|DR058625.1|DR058625 RTNIT1_13_A02.b1_A029 Roots minus ni... 143 9e-034
gb|AW290589.1|AW290589 NXNV031H03F Nsf Xylem Normal wood Ve... 124 4e-028
gb|CD027256.1|CD027256 NXNV031H03 Nsf Xylem Normal wood Ver... 124 4e-028
gb|CF401310.1|CF401310 RTWW1_11_E11.g1_A015 Well-watered lo... 122 2e-027
gb|DR058919.1|DR058919 RTNIT1_14_E01.g1_A029 Roots minus ni... 120 5e-027
gb|BX681483.1|BX681483 BX681483 RS Pinus pinaster cDNA clon... 100 7e-023
gb|DR387555.1|DR387555 RTHG1_22_D06.g2_A029 Roots plus adde... 77 1e-022
gb|DR014911.1|DR014911 HEAT1_52_H03.b1_A029 Root at 37 C fo... 76 3e-022
gb|CO362980.1|CO362980 RTK1_6_H11.g1_A029 Roots minus potas... 76 3e-022
gb|CF664702.1|CF664702 RTCNT1_11_A07.g1_A029 Root control P... 76 3e-022
gb|DR169202.1|DR169202 RTPHOS1_30_F04.g1_A029 Roots minus p... 76 3e-022
gb|CF477770.1|CF477770 RTWW3_9_E01.g1_A022 Well-watered lob... 76 3e-022
gb|DR162414.1|DR162414 RTFE1_17_D12.g1_A029 Roots minus iro... 76 3e-022
gb|CO164524.1|CO164524 FLD1_48_D01.g1_A029 Root flooded Pin... 66 1e-021
gb|DR119636.1|DR119636 RTMG1_24_B06.g1_A029 Roots minus mag... 76 1e-021
gb|CF395444.1|CF395444 RTDS2_11_A05.g1_A021 Drought-stresse... 99 3e-021
gb|BE209241.1|BE209241 NXNV_147_G05_F Nsf Xylem Normal wood... 66 8e-021
>gb|DR689458.1|DR689458 EST1079544 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACI92 3' end, mRNA sequence
Length = 760
Score = 307 bits (664), Expect = 4e-083
Identities = 126/147 (85%), Positives = 137/147 (93%)
Frame = +1 / +1
Query: 4 RSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPG 183
R YFAMKVMDK SLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVME+CPG
Sbjct: 259 RCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEYCPG 438
Query: 184 GDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLS 363
GDLHTLRQRQPGK+FSEQA +FYVAEVLLALEYLHMLG++YRDLKPENVLVREDGHIMLS
Sbjct: 439 GDLHTLRQRQPGKHFSEQAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLS 618
Query: 364 DFDLSLRCSVSLTVIKSANPGLDAMQR 444
DFDLSLRC VS T++KS + +D ++
Sbjct: 619 DFDLSLRCVVSPTLVKSTSVDVDMSKK 699
Score = 188 bits (406), Expect = 1e-047
Identities = 91/135 (67%), Positives = 96/135 (71%)
Frame = -3 / -3
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
DL V LT R+RSKS+SM+ PSS TRTFSGLRS Y PSICRYS AR TSAT*N AC
Sbjct: 668 DLTKVGLTTHLRERSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKARRTSAT*NRTAC 489
Query: 233 SEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXX 54
SEK FPGC R V RSPPGQ SIT+HENLSVSK VY VGR G SRDC
Sbjct: 488 SEKCFPGCRCRSVCRSPPGQYSITRHENLSVSKWVYNVGRKG*SRDCRISLSV*ALRSFF 309
Query: 53 RLAKEVLSITFMAK* 9
RLAKE LSITF+AK*
Sbjct: 308 RLAKEPLSITFIAK* 264
Score = 125 bits (268), Expect = 2e-028
Identities = 58/126 (46%), Positives = 84/126 (66%)
Frame = -2 / -2
Query: 387 TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLP 208
T+KR I++ +HD+ I P ++I +++V+N +HM VFQ ++L YI+ CL K+ S L
Sbjct: 642 TSKREIKI*KHDMPILPYKNIFRLEVSVHNSQHM*VFQS*KNLCYIKPNCLFRKVLSWLS 463
Query: 207 LAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIH 28
L+K V I S HNQ *+LVCLKV + W K M+Q L + P LSS++L TCQR+ IH
Sbjct: 462 LSKCV*ISSWTILHNQT*ELVCLKVGV*CWKKRMIQRL*NFPFSLSSQKLFSTCQRTFIH 283
Query: 27 NLHGKV 10
+LH K+
Sbjct: 282 HLHCKI 265
Score = 115 bits (246), Expect = 2e-025
Identities = 55/124 (44%), Positives = 73/124 (58%)
Frame = +3 / +3
Query: 9 LLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRG 188
L C+EG G* FFGKS++A+ SS+ G+ + G S S+N ++ L*DRQV M GYG+L R
Sbjct: 264 LFCNEGDG*RFFGKSKKASESSN*KGNSTISGSSFSSNIIHPL*DRQVLMSGYGVLSRRR 443
Query: 189 SSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHAVGL 368
S+H+S K F SS VLCS G+ GIP YA + +C G W +HA
Sbjct: 444 STHTSTTTTRKALF*TSSSVLCSRGSSSFGIPTYAGSCVQRPQA*KCSCKGGWAYHAFRF 623
Query: 369 RSIS 380
S+S
Sbjct: 624 *SLS 635
Score = 100 bits (214), Expect = 4e-021
Identities = 53/125 (42%), Positives = 69/125 (55%)
Frame = +2 / +2
Query: 14 LP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALEGIF 193
L *R WI++LWQV +S EL+ G+ + W I F+Q TLRQTS H WLW+ E I+
Sbjct: 269 LQ*R*WIKVLWQVEKSF*ELKLKGKFYNLWIILFFQHYTPTLRQTSSHVWLWSIVQEEIY 448
Query: 194 TLFAKGSLENIFQSKQQSSM*LRCSLHWNTCICLGLYTVILNQRMSSFGKMATSCCRTSI 373
T F + E+ F +KQ M* R WNT IC L T + +M G+M SC + I
Sbjct: 449 THFDNDNQESTFLNKQFGFM*QRFF*LWNTYICWELCTETSSLKMFL*GRMGISCFQILI 628
Query: 374 YLFAV 388
L V
Sbjct: 629 SLLDV 643
>gb|DT635537.1|DT635537 EST1150468 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGH89 3' end, mRNA sequence
Length = 768
Score = 307 bits (664), Expect = 4e-083
Identities = 126/147 (85%), Positives = 137/147 (93%)
Frame = +1 / +3
Query: 4 RSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPG 183
R YFAMKVMDK SLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVME+CPG
Sbjct: 267 RCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEYCPG 446
Query: 184 GDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLS 363
GDLHTLRQRQPGK+FSEQA +FYVAEVLLALEYLHMLG++YRDLKPENVLVREDGHIMLS
Sbjct: 447 GDLHTLRQRQPGKHFSEQAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLS 626
Query: 364 DFDLSLRCSVSLTVIKSANPGLDAMQR 444
DFDLSLRC VS T++KS + +D ++
Sbjct: 627 DFDLSLRCVVSPTLVKSTSVDVDMSKK 707
Score = 188 bits (406), Expect = 1e-047
Identities = 91/135 (67%), Positives = 96/135 (71%)
Frame = -3 / -3
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
DL V LT R+RSKS+SM+ PSS TRTFSGLRS Y PSICRYS AR TSAT*N AC
Sbjct: 676 DLTKVGLTTHLRERSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKARRTSAT*NRTAC 497
Query: 233 SEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXX 54
SEK FPGC R V RSPPGQ SIT+HENLSVSK VY VGR G SRDC
Sbjct: 496 SEKCFPGCRCRSVCRSPPGQYSITRHENLSVSKWVYNVGRKG*SRDCRISLSV*ALRSFF 317
Query: 53 RLAKEVLSITFMAK* 9
RLAKE LSITF+AK*
Sbjct: 316 RLAKEPLSITFIAK* 272
Score = 125 bits (268), Expect = 2e-028
Identities = 58/126 (46%), Positives = 84/126 (66%)
Frame = -2 / -2
Query: 387 TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLP 208
T+KR I++ +HD+ I P ++I +++V+N +HM VFQ ++L YI+ CL K+ S L
Sbjct: 650 TSKREIKI*KHDMPILPYKNIFRLEVSVHNSQHM*VFQS*KNLCYIKPNCLFRKVLSWLS 471
Query: 207 LAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIH 28
L+K V I S HNQ *+LVCLKV + W K M+Q L + P LSS++L TCQR+ IH
Sbjct: 470 LSKCV*ISSWTILHNQT*ELVCLKVGV*CWKKRMIQRL*NFPFSLSSQKLFSTCQRTFIH 291
Query: 27 NLHGKV 10
+LH K+
Sbjct: 290 HLHCKI 273
Score = 115 bits (246), Expect = 2e-025
Identities = 55/124 (44%), Positives = 73/124 (58%)
Frame = +3 / +2
Query: 9 LLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRG 188
L C+EG G* FFGKS++A+ SS+ G+ + G S S+N ++ L*DRQV M GYG+L R
Sbjct: 272 LFCNEGDG*RFFGKSKKASESSN*KGNSTISGSSFSSNIIHPL*DRQVLMSGYGVLSRRR 451
Query: 189 SSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHAVGL 368
S+H+S K F SS VLCS G+ GIP YA + +C G W +HA
Sbjct: 452 STHTSTTTTRKALF*TSSSVLCSRGSSSFGIPTYAGSCVQRPQA*KCSCKGGWAYHAFRF 631
Query: 369 RSIS 380
S+S
Sbjct: 632 *SLS 643
Score = 100 bits (214), Expect = 4e-021
Identities = 53/125 (42%), Positives = 69/125 (55%)
Frame = +2 / +1
Query: 14 LP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALEGIF 193
L *R WI++LWQV +S EL+ G+ + W I F+Q TLRQTS H WLW+ E I+
Sbjct: 277 LQ*R*WIKVLWQVEKSF*ELKLKGKFYNLWIILFFQHYTPTLRQTSSHVWLWSIVQEEIY 456
Query: 194 TLFAKGSLENIFQSKQQSSM*LRCSLHWNTCICLGLYTVILNQRMSSFGKMATSCCRTSI 373
T F + E+ F +KQ M* R WNT IC L T + +M G+M SC + I
Sbjct: 457 THFDNDNQESTFLNKQFGFM*QRFF*LWNTYICWELCTETSSLKMFL*GRMGISCFQILI 636
Query: 374 YLFAV 388
L V
Sbjct: 637 SLLDV 651
>gb|CV034050.1|CV034050 RTNACL1_38_G01.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_G01_A029 3', mRNA sequence
Length = 796
Score = 306 bits (663), Expect = 5e-083
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TR YFAMKVMDK SLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP
Sbjct: 237 TRCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 416
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLHTLRQRQPGK+FSE AA+FY AEVLL+LEYLHMLG++YRDLKPENVLVREDGHIML
Sbjct: 417 GGDLHTLRQRQPGKHFSELAARFYAAEVLLSLEYLHMLGVVYRDLKPENVLVREDGHIML 596
Query: 361 SDFDLSLRCSVSLTVIKSANPGLDAMQR 444
SDFDLSLRC+V+ T++KS++ D +R
Sbjct: 597 SDFDLSLRCAVNPTLVKSSSIDHDPSKR 680
Score = 182 bits (391), Expect = 2e-045
Identities = 87/135 (64%), Positives = 94/135 (69%)
Frame = -3 / -1
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
DL V LT R+D+SKS+SM+ PSS TRTFSGLRS Y PSICRYS R TSA *N AA
Sbjct: 649 DLTKVGLTAHRKDKSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKERRTSAA*NRAAS 470
Query: 233 SEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXX 54
SEK PGC R V RSPPGQNSITKHENLSVSK VY VGR G S DC
Sbjct: 469 SEKCLPGCRCRSVCRSPPGQNSITKHENLSVSKCVYNVGRKG*SNDCRISLSV*ALSNFF 290
Query: 53 RLAKEVLSITFMAK* 9
RLA++ LSITF+AK*
Sbjct: 289 RLARDALSITFIAK* 245
Score = 138 bits (296), Expect = 2e-032
Identities = 63/129 (48%), Positives = 86/129 (66%)
Frame = -2 / -3
Query: 387 TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLP 208
T +R I++ +HD++IFP +I F+I+V+N +HMQ+ Q K++L I+ CC L ++ + L
Sbjct: 623 TPQRQIKI*KHDMSIFPY*NIFRFEISVHNSEHMQILQRKKNLCCIKPCCKLREVLAWLS 444
Query: 207 LAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIH 28
L K V+I SRA+ HN *KLVC KV I W K M+Q L D LS QL PTC R +H
Sbjct: 443 LPKCVQISSRAKLHN*T*KLVCFKVCI*CWKKRMIQ*L*DFSFSLSP*QLFPTC*RCFVH 264
Query: 27 NLHGKVTPC 1
NLH K+TPC
Sbjct: 263 NLHCKITPC 237
Score = 121 bits (258), Expect = 4e-027
Identities = 54/117 (46%), Positives = 71/117 (60%)
Frame = +3 / +2
Query: 9 LLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRG 188
L C+EGYG KSE+ A S+ +P V G S S+N +Y+L*+RQVFM YG+LPWR
Sbjct: 245 LFCNEGYGQSISSKSEKVAKGSN*KRNPTVIGSSFSSNIIYTL*NRQVFMFSYGVLPWRR 424
Query: 189 SSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHA 359
S+H+S A + A S VLCS G+ G+ AYA + S T +C GRW +HA
Sbjct: 425 SAHTSATTARQALL*ACSTVLCSRGSSFFGVSAYARSCVQRSQT*KCSSKGRWTYHA 595
Score = 103 bits (219), Expect = 9e-022
Identities = 58/128 (45%), Positives = 69/128 (53%)
Frame = +2 / +1
Query: 5 GVTLP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALE 184
GV L *RLW + L QVG+SC L+ +S S W I F+Q I TL+QTSFH LW+ ALE
Sbjct: 241 GVILQ*RLWTKHL*QVGKSC*GLKLKEKSYSHWIILFFQHYIHTLKQTSFHV*LWSFALE 420
Query: 185 GIFTLFAKGSLENIFQSKQQSSM*LRCSLHWNTCICLGLYTVILNQRMSSFGKMATSCCR 364
I T F S + S Q M R W+ CIC L T I N +M GKM SC +
Sbjct: 421 EICTHFGNDSQASTSLSLQHGFMQQRFFFLWSICICSELCTEISNLKMF**GKMDISCFQ 600
Query: 365 TSIYLFAV 388
I L V
Sbjct: 601 ILICLCGV 624
>gb|DR018819.1|DR018819 STRS1_25_H09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_25_H09_A034 5', mRNA sequence
Length = 801
Score = 306 bits (663), Expect = 5e-083
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TR YFAMKVMDK SLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP
Sbjct: 132 TRCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 311
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLHTLRQRQPGK+FSE AA+FY AEVLL+LEYLHMLG++YRDLKPENVLVREDGHIML
Sbjct: 312 GGDLHTLRQRQPGKHFSELAARFYAAEVLLSLEYLHMLGVVYRDLKPENVLVREDGHIML 491
Query: 361 SDFDLSLRCSVSLTVIKSANPGLDAMQR 444
SDFDLSLRC+V+ T++KS++ D +R
Sbjct: 492 SDFDLSLRCAVNPTLVKSSSIDHDPSKR 575
Score = 182 bits (391), Expect = 2e-045
Identities = 87/135 (64%), Positives = 94/135 (69%)
Frame = -3 / -3
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
DL V LT R+D+SKS+SM+ PSS TRTFSGLRS Y PSICRYS R TSA *N AA
Sbjct: 544 DLTKVGLTAHRKDKSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKERRTSAA*NRAAS 365
Query: 233 SEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXX 54
SEK PGC R V RSPPGQNSITKHENLSVSK VY VGR G S DC
Sbjct: 364 SEKCLPGCRCRSVCRSPPGQNSITKHENLSVSKCVYNVGRKG*SNDCRISLSV*ALSNFF 185
Query: 53 RLAKEVLSITFMAK* 9
RLA++ LSITF+AK*
Sbjct: 184 RLARDALSITFIAK* 140
Score = 138 bits (296), Expect = 2e-032
Identities = 63/129 (48%), Positives = 86/129 (66%)
Frame = -2 / -2
Query: 387 TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLP 208
T +R I++ +HD++IFP +I F+I+V+N +HMQ+ Q K++L I+ CC L ++ + L
Sbjct: 518 TPQRQIKI*KHDMSIFPY*NIFRFEISVHNSEHMQILQRKKNLCCIKPCCKLREVLAWLS 339
Query: 207 LAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIH 28
L K V+I SRA+ HN *KLVC KV I W K M+Q L D LS QL PTC R +H
Sbjct: 338 LPKCVQISSRAKLHN*T*KLVCFKVCI*CWKKRMIQ*L*DFSFSLSP*QLFPTC*RCFVH 159
Query: 27 NLHGKVTPC 1
NLH K+TPC
Sbjct: 158 NLHCKITPC 132
Score = 121 bits (258), Expect = 4e-027
Identities = 54/117 (46%), Positives = 71/117 (60%)
Frame = +3 / +2
Query: 9 LLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRG 188
L C+EGYG KSE+ A S+ +P V G S S+N +Y+L*+RQVFM YG+LPWR
Sbjct: 140 LFCNEGYGQSISSKSEKVAKGSN*KRNPTVIGSSFSSNIIYTL*NRQVFMFSYGVLPWRR 319
Query: 189 SSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHA 359
S+H+S A + A S VLCS G+ G+ AYA + S T +C GRW +HA
Sbjct: 320 SAHTSATTARQALL*ACSTVLCSRGSSFFGVSAYARSCVQRSQT*KCSSKGRWTYHA 490
Score = 103 bits (219), Expect = 9e-022
Identities = 58/128 (45%), Positives = 69/128 (53%)
Frame = +2 / +1
Query: 5 GVTLP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALE 184
GV L *RLW + L QVG+SC L+ +S S W I F+Q I TL+QTSFH LW+ ALE
Sbjct: 136 GVILQ*RLWTKHL*QVGKSC*GLKLKEKSYSHWIILFFQHYIHTLKQTSFHV*LWSFALE 315
Query: 185 GIFTLFAKGSLENIFQSKQQSSM*LRCSLHWNTCICLGLYTVILNQRMSSFGKMATSCCR 364
I T F S + S Q M R W+ CIC L T I N +M GKM SC +
Sbjct: 316 EICTHFGNDSQASTSLSLQHGFMQQRFFFLWSICICSELCTEISNLKMF**GKMDISCFQ 495
Query: 365 TSIYLFAV 388
I L V
Sbjct: 496 ILICLCGV 519
>gb|BX250464.1|BX250464 BX250464 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP037C06, mRNA sequence
Length = 620
Score = 291 bits (629), Expect = 3e-078
Identities = 119/148 (80%), Positives = 132/148 (89%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T+ YFAMKVM+ SRKK+LRAQTEREILQ LDHPFLPTLYTHFETDKFSCLVME+CP
Sbjct: 88 TKCYFAMKVMENGPSVSRKKMLRAQTEREILQMLDHPFLPTLYTHFETDKFSCLVMEYCP 267
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLH LRQRQPG+ FSEQAA+FY AEVLLALEYLHMLGI+YRDLKPENVLVREDGHIML
Sbjct: 268 GGDLHILRQRQPGRNFSEQAARFYAAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIML 447
Query: 361 SDFDLSLRCSVSLTVIKSANPGLDAMQR 444
SDFDLSLRC+VS T++KS+ D ++R
Sbjct: 448 SDFDLSLRCAVSPTLVKSSPVDFDPLKR 531
Score = 164 bits (353), Expect = 3e-040
Identities = 73/102 (71%), Positives = 80/102 (78%)
Frame = -3 / -1
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
D V LT +D+SKS+S++ PSS TRTFSGLRS Y IPSICRYS AR TSA *N AAC
Sbjct: 500 DFTRVGLTAHLKDKSKSESIICPSSLTRTFSGLRSLYTIPSICRYSKARRTSAA*NRAAC 321
Query: 233 SEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNG 108
SEK+ PGC R + RSPPGQ SITKHENLSVSK*VY VGRNG
Sbjct: 320 SEKFLPGCRCRSMWRSPPGQYSITKHENLSVSK*VYNVGRNG 195
Score = 131 bits (280), Expect = 4e-030
Identities = 57/132 (43%), Positives = 90/132 (68%)
Frame = -2 / -3
Query: 396 AH*TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFS 217
A+ T++R*I++ +H++ IFP+E+I WF+++V+N KHM + Q +++L I+ CCL *++ +
Sbjct: 483 ANSTSQR*IKI*EHNMPIFPHENIFWFEVSVHNSKHM*ILQSQKNLCCIKPCCLF*EVSA 304
Query: 216 RLPLAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRS 37
LPL++ V+I S A HN *+LV KVS+ KWM+Q L+ L S+ L P R
Sbjct: 303 WLPLSEYVEISSWAILHN*T*ELVSFKVSV*CGKKWMIQHLKYFSFSLGSEHLFPAH*RP 124
Query: 36 LIHNLHGKVTPC 1
+ H+LHGK+T C
Sbjct: 123 IFHHLHGKITLC 88
Score = 106 bits (226), Expect = 1e-022
Identities = 50/118 (42%), Positives = 70/118 (59%)
Frame = +3 / +3
Query: 9 LLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRG 188
L CHEG G F + E+ A S D + + G SIS++ ++SL*+ QV M YG+LP R
Sbjct: 96 LFCHEGDGKWAFSEPEKDAQSPD*KRNTSDAGSSISSHIIHSL*N*QVLMFSYGVLPRRR 275
Query: 189 SSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHAV 362
S H+ AA + R SS VLCS G+ G+ YAW+ + TR+C R GRW ++A+
Sbjct: 276 SPHTPTAAARQKLLRTSSTVLCSRGSSGFGVSTYAWNCVQRPQTRKCSREGRWAYYAL 449
>gb|DR683825.1|DR683825 EST1073901 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAL70 3' end, mRNA sequence
Length = 788
Score = 291 bits (629), Expect = 3e-078
Identities = 119/148 (80%), Positives = 132/148 (89%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T+ YFAMKVM+ SRKK+LRAQTEREILQ LDHPFLPTLYTHFETDKFSCLVME+CP
Sbjct: 222 TKCYFAMKVMENGPSVSRKKMLRAQTEREILQMLDHPFLPTLYTHFETDKFSCLVMEYCP 401
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLH LRQRQPG+ FSEQAA+FY AEVLLALEYLHMLGI+YRDLKPENVLVREDGHIML
Sbjct: 402 GGDLHILRQRQPGRNFSEQAARFYAAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIML 581
Query: 361 SDFDLSLRCSVSLTVIKSANPGLDAMQR 444
SDFDLSLRC+VS T++KS+ D ++R
Sbjct: 582 SDFDLSLRCAVSPTLVKSSPVDFDPLKR 665
Score = 164 bits (353), Expect = 3e-040
Identities = 73/102 (71%), Positives = 80/102 (78%)
Frame = -3 / -2
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
D V LT +D+SKS+S++ PSS TRTFSGLRS Y IPSICRYS AR TSA *N AAC
Sbjct: 634 DFTRVGLTAHLKDKSKSESIICPSSLTRTFSGLRSLYTIPSICRYSKARRTSAA*NRAAC 455
Query: 233 SEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNG 108
SEK+ PGC R + RSPPGQ SITKHENLSVSK*VY VGRNG
Sbjct: 454 SEKFLPGCRCRSMWRSPPGQYSITKHENLSVSK*VYNVGRNG 329
Score = 135 bits (289), Expect = 2e-031
Identities = 58/132 (43%), Positives = 92/132 (69%)
Frame = -2 / -1
Query: 396 AH*TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFS 217
A+ T++R*I++ +H++ IFP+E+I WF+++V+N KHM + Q +++L I+ CCL *++ +
Sbjct: 617 ANSTSQR*IKI*EHNMPIFPHENIFWFEVSVHNSKHM*ILQSQKNLCRIKPCCLF*EVSA 438
Query: 216 RLPLAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRS 37
LPL++ V+I S A HN *+LV KVS+ KWM+Q L+ LSS+ L P +R
Sbjct: 437 WLPLSEYVEISSWAILHN*T*ELVSFKVSV*CGKKWMIQHLKYFSFSLSSEHLFPAHRRP 258
Query: 36 LIHNLHGKVTPC 1
+ H+LHGK+T C
Sbjct: 257 IFHHLHGKITLC 222
Score = 109 bits (233), Expect = 1e-023
Identities = 51/118 (43%), Positives = 71/118 (60%)
Frame = +3 / +2
Query: 9 LLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRG 188
L CHEG G FG+ E+ A SSD + + G SIS++ ++SL*+ QV M YG+LP R
Sbjct: 230 LFCHEGDGKWAFGEPEKDAQSSD*KRNTSDAGSSISSHIIHSL*N*QVLMFSYGVLPRRR 409
Query: 189 SSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHAV 362
S H+ AA + R SS VLC G+ G+ YAW+ + TR+C R GRW ++A+
Sbjct: 410 SPHTPTAAARQKLLRTSSTVLCGRGSSGFGVSTYAWNCVQRPQTRKCSREGRWAYYAL 583
>gb|DT631716.1|DT631716 EST1146647 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFB84 3' end, mRNA sequence
Length = 792
Score = 291 bits (629), Expect = 3e-078
Identities = 119/148 (80%), Positives = 132/148 (89%)
Frame = +1 / +2
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T+ YFAMKVM+ SRKK+LRAQTEREILQ LDHPFLPTLYTHFETDKFSCLVME+CP
Sbjct: 230 TKCYFAMKVMENGPSVSRKKMLRAQTEREILQMLDHPFLPTLYTHFETDKFSCLVMEYCP 409
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLH LRQRQPG+ FSEQAA+FY AEVLLALEYLHMLGI+YRDLKPENVLVREDGHIML
Sbjct: 410 GGDLHILRQRQPGRNFSEQAARFYAAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIML 589
Query: 361 SDFDLSLRCSVSLTVIKSANPGLDAMQR 444
SDFDLSLRC+VS T++KS+ D ++R
Sbjct: 590 SDFDLSLRCAVSPTLVKSSPVDFDPLKR 673
Score = 164 bits (353), Expect = 3e-040
Identities = 73/102 (71%), Positives = 80/102 (78%)
Frame = -3 / -1
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
D V LT +D+SKS+S++ PSS TRTFSGLRS Y IPSICRYS AR TSA *N AAC
Sbjct: 642 DFTRVGLTAHLKDKSKSESIICPSSLTRTFSGLRSLYTIPSICRYSKARRTSAA*NRAAC 463
Query: 233 SEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRVGRNG 108
SEK+ PGC R + RSPPGQ SITKHENLSVSK*VY VGRNG
Sbjct: 462 SEKFLPGCRCRSMWRSPPGQYSITKHENLSVSK*VYNVGRNG 337
Score = 135 bits (289), Expect = 2e-031
Identities = 58/132 (43%), Positives = 92/132 (69%)
Frame = -2 / -3
Query: 396 AH*TAKR*IEVRQHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFS 217
A+ T++R*I++ +H++ IFP+E+I WF+++V+N KHM + Q +++L I+ CCL *++ +
Sbjct: 625 ANSTSQR*IKI*EHNMPIFPHENIFWFEVSVHNSKHM*ILQSQKNLCRIKPCCLF*EVSA 446
Query: 216 RLPLAKSVKIPSRAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRS 37
LPL++ V+I S A HN *+LV KVS+ KWM+Q L+ LSS+ L P +R
Sbjct: 445 WLPLSEYVEISSWAILHN*T*ELVSFKVSV*CGKKWMIQHLKYFSFSLSSEHLFPAHRRP 266
Query: 36 LIHNLHGKVTPC 1
+ H+LHGK+T C
Sbjct: 265 IFHHLHGKITLC 230
Score = 109 bits (233), Expect = 1e-023
Identities = 51/118 (43%), Positives = 71/118 (60%)
Frame = +3 / +1
Query: 9 LLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRG 188
L CHEG G FG+ E+ A SSD + + G SIS++ ++SL*+ QV M YG+LP R
Sbjct: 238 LFCHEGDGKWAFGEPEKDAQSSD*KRNTSDAGSSISSHIIHSL*N*QVLMFSYGVLPRRR 417
Query: 189 SSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHAV 362
S H+ AA + R SS VLC G+ G+ YAW+ + TR+C R GRW ++A+
Sbjct: 418 SPHTPTAAARQKLLRTSSTVLCGRGSSGFGVSTYAWNCVQRPQTRKCSREGRWAYYAL 591
>gb|CV034119.1|CV034119 RTNACL1_38_G01.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_G01_A029 5', mRNA sequence
Length = 614
Score = 272 bits (589), Expect = 8e-073
Identities = 111/120 (92%), Positives = 116/120 (96%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
TR YFAMKVMDK SLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP
Sbjct: 255 TRCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 434
Query: 181 GGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIML 360
GGDLHTLRQRQPGK+FSE AA+FY AEVLL+LEYLHMLG++YRDLKPENVLVREDGHIML
Sbjct: 435 GGDLHTLRQRQPGKHFSELAARFYAAEVLLSLEYLHMLGVVYRDLKPENVLVREDGHIML 614
Score = 160 bits (343), Expect = 7e-039
Identities = 77/117 (65%), Positives = 81/117 (69%)
Frame = -3 / -2
Query: 359 SMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAACSEKYFPGCLWRRV*RSPP 180
SM+ PSS TRTFSGLRS Y PSICRYS R TSA *N AA SEK PGC R V RSPP
Sbjct: 613 SMICPSSLTRTFSGLRSLYTTPSICRYSKERRTSAA*NRAASSEKCLPGCRCRSVCRSPP 434
Query: 179 GQNSITKHENLSVSK*VYRVGRNGWSRDCXXXXXXXXXXXXXRLAKEVLSITFMAK* 9
GQNSITKHENLSVSK VY VGR G S DC RLA++ LSITF+AK*
Sbjct: 433 GQNSITKHENLSVSKCVYNVGRKG*SNDCRISLSV*ALSNFFRLARDALSITFIAK* 263
Score = 133 bits (286), Expect = 5e-031
Identities = 60/120 (50%), Positives = 80/120 (66%)
Frame = -2 / -1
Query: 360 QHDVAIFPNEDILWFKITVYNPKHMQVFQCKEHLSYIELCCLL*KIFSRLPLAKSVKIPS 181
+HD++IFP +I F+I+V+N +HMQ+ Q K++L I+ CC L ++ + L L K V+I S
Sbjct: 614 KHDMSIFPY*NIFRFEISVHNSEHMQILQRKKNLCCIKPCCKLREVLAWLSLPKCVQISS 435
Query: 180 RAEFHNQA*KLVCLKVSIQGW*KWMVQGLQDLPLGLSSKQLLPTCQRSLIHNLHGKVTPC 1
RA+ HN *KLVC KV I W K M+Q L D LS QL PTC R +HNLH K+TPC
Sbjct: 434 RAKLHN*T*KLVCFKVCI*CWKKRMIQ*L*DFSFSLSP*QLFPTC*RCFVHNLHCKITPC 255
Score = 121 bits (258), Expect = 4e-027
Identities = 54/117 (46%), Positives = 71/117 (60%)
Frame = +3 / +2
Query: 9 LLCHEGYG*DFFGKSEEAASSSDRAGDPAVPGPSISTNPVYSL*DRQVFMLGYGILPWRG 188
L C+EGYG KSE+ A S+ +P V G S S+N +Y+L*+RQVFM YG+LPWR
Sbjct: 263 LFCNEGYGQSISSKSEKVAKGSN*KRNPTVIGSSFSSNIIYTL*NRQVFMFSYGVLPWRR 442
Query: 189 SSHSSPKAAWKIFFRASSKVLCS*GAPCIGIPAYAWDYIP*S*TRECPRSGRWPHHA 359
S+H+S A + A S VLCS G+ G+ AYA + S T +C GRW +HA
Sbjct: 443 SAHTSATTARQALL*ACSTVLCSRGSSFFGVSAYARSCVQRSQT*KCSSKGRWTYHA 613
Score = 101 bits (215), Expect = 3e-021
Identities = 55/118 (46%), Positives = 65/118 (55%)
Frame = +2 / +1
Query: 5 GVTLP*RLWIRLLWQVGRSCFELRPSGRSCSPWTIHFYQPCILTLRQTSFHAWLWNSALE 184
GV L *RLW + L QVG+SC L+ +S S W I F+Q I TL+QTSFH LW+ ALE
Sbjct: 259 GVILQ*RLWTKHL*QVGKSC*GLKLKEKSYSHWIILFFQHYIHTLKQTSFHV*LWSFALE 438
Query: 185 GIFTLFAKGSLENIFQSKQQSSM*LRCSLHWNTCICLGLYTVILNQRMSSFGKMATSC 358
I T F S + S Q M R W+ CIC L T I N +M GKM SC
Sbjct: 439 EICTHFGNDSQASTSLSLQHGFMQQRFFFLWSICICSELCTEISNLKMF**GKMDISC 612
>gb|DR060775.1|DR060775 RTNIT1_30_A04.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_A04_A029 3', mRNA sequence
Length = 785
Score = 220 bits (474), Expect = 6e-057
Identities = 88/111 (79%), Positives = 101/111 (90%)
Frame = +1 / -1
Query: 112 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHM 291
F TLYTHFETDKFSCLVMEFCPGG+LHTLRQRQPGK+FSE AA+FY AEVLL+LEYLHM
Sbjct: 785 FSSTLYTHFETDKFSCLVMEFCPGGELHTLRQRQPGKHFSELAARFYAAEVLLSLEYLHM 606
Query: 292 LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSANPGLDAMQR 444
LG++YRDLKPENVLVREDGHIMLSDFDLSLRC+V+ T++KS++ D +R
Sbjct: 605 LGVVYRDLKPENVLVREDGHIMLSDFDLSLRCAVNPTLVKSSSIDHDPSKR 453
Score = 149 bits (320), Expect = 1e-035
Identities = 69/98 (70%), Positives = 73/98 (74%)
Frame = -3 / +1
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
DL V LT R+D+SKS+SM+ PSS TRTFSGLRS Y PSICRYS R TSA *N AA
Sbjct: 484 DLTKVGLTAHRKDKSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKERRTSAA*NRAAS 663
Query: 233 SEKYFPGCLWRRV*RSPPGQNSITKHENLSVSK*VYRV 120
SEK PGC R V SPPGQNSITKHENLSVSK VY V
Sbjct: 664 SEKCLPGCRCRSVCSSPPGQNSITKHENLSVSKCVYNV 777
>gb|DR049929.1|DR049929 RTBOR1_20_C02.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_20_C02_A029 3', mRNA sequence
Length = 774
Score = 191 bits (411), Expect = 3e-048
Identities = 77/122 (63%), Positives = 98/122 (80%)
Frame = +1 / -3
Query: 16 AMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH 195
AMKVM+K + ++ RA+ E+EILQ LDHPFLP L+T FE++ S L+M +C GGDL+
Sbjct: 757 AMKVMNKELMQKKRSHKRARMEKEILQKLDHPFLPKLFTKFESENHSFLLMSYCSGGDLN 578
Query: 196 TLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 375
TLRQRQ + FSE AA+FY AEV+LALEYLH GI+YRDLKPEN+L++ DGHIM++DFDL
Sbjct: 577 TLRQRQKNRRFSESAARFYAAEVVLALEYLHQHGILYRDLKPENILLQADGHIMITDFDL 398
Query: 376 SL 381
SL
Sbjct: 397 SL 392
>gb|DR693421.1|DR693421 EST1083509 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADY90 3' end, mRNA sequence
Length = 771
Score = 190 bits (409), Expect = 6e-048
Identities = 77/122 (63%), Positives = 97/122 (79%)
Frame = +1 / +1
Query: 16 AMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH 195
AMKVM+K + ++ RA+ E+EILQ LDHPFLP L+T FE++ S L+M +C GGDL
Sbjct: 139 AMKVMNKELMQKKRSHKRARMEKEILQKLDHPFLPKLFTKFESENHSFLLMSYCSGGDLS 318
Query: 196 TLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 375
TLRQRQ + FSE AA+FY AEV+LALEYLH GI+YRDLKPEN+L++ DGHIM++DFDL
Sbjct: 319 TLRQRQKNRRFSESAARFYAAEVVLALEYLHQHGILYRDLKPENILLQADGHIMITDFDL 498
Query: 376 SL 381
SL
Sbjct: 499 SL 504
>gb|DT637931.1|DT637931 EST1152862 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH920 3' end, mRNA sequence
Length = 848
Score = 190 bits (409), Expect = 6e-048
Identities = 77/122 (63%), Positives = 97/122 (79%)
Frame = +1 / +3
Query: 16 AMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH 195
AMKVM+K + ++ RA+ E+EILQ LDHPFLP L+T FE++ S L+M +C GGDL
Sbjct: 147 AMKVMNKELMQKKRSHKRARMEKEILQKLDHPFLPKLFTKFESENHSFLLMSYCSGGDLS 326
Query: 196 TLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 375
TLRQRQ + FSE AA+FY AEV+LALEYLH GI+YRDLKPEN+L++ DGHIM++DFDL
Sbjct: 327 TLRQRQKNRRFSESAARFYAAEVVLALEYLHQHGILYRDLKPENILLQADGHIMITDFDL 506
Query: 376 SL 381
SL
Sbjct: 507 SL 512
>gb|DR687924.1|DR687924 EST1078007 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABY22 3' end, mRNA sequence
Length = 814
Score = 187 bits (403), Expect = 4e-047
Identities = 76/122 (62%), Positives = 97/122 (79%)
Frame = +1 / +1
Query: 16 AMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH 195
AMKVM+K + ++ RA+ E+EILQ LDHPFLP L+T FE++ S L+M +C GGDL+
Sbjct: 142 AMKVMNKELMQKKRSHKRARMEKEILQKLDHPFLPKLFTKFESENHSFLLMSYCSGGDLN 321
Query: 196 TLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 375
TLRQRQ + FSE AA+FY AEV+LALEYLH GI+YRDLKPEN+L++ D HIM++DFDL
Sbjct: 322 TLRQRQKNRRFSESAARFYAAEVVLALEYLHQHGILYRDLKPENILLQADRHIMITDFDL 501
Query: 376 SL 381
SL
Sbjct: 502 SL 507
>gb|DT634529.1|DT634529 EST1149460 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG692 3' end, mRNA sequence
Length = 756
Score = 187 bits (403), Expect = 4e-047
Identities = 76/122 (62%), Positives = 97/122 (79%)
Frame = +1 / +3
Query: 16 AMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH 195
AMKVM+K + ++ RA+ E+EILQ LDHPFLP L+T FE++ S L+M +C GGDL+
Sbjct: 150 AMKVMNKELMQKKRSHKRARMEKEILQKLDHPFLPKLFTKFESENHSFLLMSYCSGGDLN 329
Query: 196 TLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 375
TLRQRQ + FSE AA+FY AEV+LALEYLH GI+YRDLKPEN+L++ D HIM++DFDL
Sbjct: 330 TLRQRQKNRRFSESAARFYAAEVVLALEYLHQHGILYRDLKPENILLQADRHIMITDFDL 509
Query: 376 SL 381
SL
Sbjct: 510 SL 515
>gb|AW869853.1|AW869853 NXNV_122_C07_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_122_C07 5' similar to Arabidopsis thaliana
sequence At5g58140 non phototropic hypocotyl 1-like
(NPL1) see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 606
Score = 186 bits (400), Expect = 1e-046
Identities = 77/133 (57%), Positives = 97/133 (72%)
Frame = +1 / +2
Query: 13 FAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL 192
FAMK MDK + +R K+ RA EREI+ +LDHPFLPTLY F+T CL+ +F PGG+L
Sbjct: 8 FAMKAMDKEVMLNRNKVHRACIEREIMATLDHPFLPTLYASFQTKTHVCLITDFAPGGEL 187
Query: 193 HTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 372
L RQP K E AA+FYVAEV++ALEYLH GI+YRDLKPEN+L++ DGH++L+DFD
Sbjct: 188 FMLVDRQPMKVLREDAARFYVAEVVVALEYLHCQGIVYRDLKPENLLLQSDGHLLLTDFD 367
Query: 373 LSLRCSVSLTVIK 411
LS S +IK
Sbjct: 368 LSYLASCKPQLIK 406
>gb|DR117407.1|DR117407 RTMG1_6_F10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_F10_A029 5', mRNA sequence
Length = 831
Score = 171 bits (368), Expect = 3e-042
Identities = 70/90 (77%), Positives = 79/90 (87%)
Frame = +1 / +3
Query: 175 CPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHI 354
CPGGDLH LRQR G+ FSEQAA+FY AEVLLALEYLHMLGI+YRDLKPENVLVREDGHI
Sbjct: 3 CPGGDLHILRQRHSGRNFSEQAARFYAAEVLLALEYLHMLGIVYRDLKPENVLVREDGHI 182
Query: 355 MLSDFDLSLRCSVSLTVIKSANPGLDAMQR 444
MLSDFDLSLRC+VS T++KS+ D ++R
Sbjct: 183 MLSDFDLSLRCAVSPTLVKSSPVDFDPLKR 272
Score = 117 bits (250), Expect = 5e-026
Identities = 52/80 (65%), Positives = 59/80 (73%)
Frame = -3 / -3
Query: 413 DLITVRLTEQRRDRSKSDSMMWPSSRTRTFSGLRSRYIIPSICRYSNARSTSAT*NFAAC 234
D V LT +D+SKS+S++ PSS TRTFSGLRS Y IPSICRYS AR TSA *N AAC
Sbjct: 241 DFTRVGLTAHLKDKSKSESIICPSSLTRTFSGLRSLYTIPSICRYSKARRTSAA*NRAAC 62
Query: 233 SEKYFPGCLWRRV*RSPPGQ 174
SEK+ P C R + RSPPGQ
Sbjct: 61 SEKFLPECRCRSMWRSPPGQ 2
>gb|DR684550.1|DR684550 EST1074627 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAU02 3' end, mRNA sequence
Length = 855
Score = 160 bits (345), Expect = 4e-039
Identities = 63/96 (65%), Positives = 78/96 (81%)
Frame = +1 / +3
Query: 94 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLA 273
Q LDHPFLP L+T FE++ S L+M +C GGDL+TLRQRQ + FSE AA+FY AEV+L
Sbjct: 3 QKLDHPFLPKLFTKFESENHSFLLMSYCSGGDLNTLRQRQKNRRFSESAARFYAAEVVLV 182
Query: 274 LEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSL 381
LEYLH GI+YRDLKPEN+L++ DGHIM++DFD SL
Sbjct: 183 LEYLHQHGILYRDLKPENILLQADGHIMITDFDPSL 290
>gb|DR049360.1|DR049360 RTBOR1_15_H05.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_15_H05_A029 5', mRNA sequence
Length = 437
Score = 143 bits (307), Expect = 7e-034
Identities = 58/95 (61%), Positives = 71/95 (74%)
Frame = +1 / +2
Query: 100 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALE 279
L HPFLP+L ETDK +E+CPGGDL +LR QP K FSE A +FY AE++LALE
Sbjct: 17 LTHPFLPSLIAQVETDKIVGWGIEYCPGGDLRSLRHIQPDKMFSESAIRFYAAEIVLALE 196
Query: 280 YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLR 384
+LH GI+YRDLK EN+L++ GHIML+DFDLS R
Sbjct: 197 HLHGQGIVYRDLKMENILIQSTGHIMLTDFDLSTR 301
>gb|DR058625.1|DR058625 RTNIT1_13_A02.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_A02_A029 3', mRNA sequence
Length = 618
Score = 143 bits (306), Expect = 9e-034
Identities = 59/97 (60%), Positives = 72/97 (74%)
Frame = +1 / -3
Query: 73 QTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFY 252
+ EREIL SL HPFLP+L ETDK +E+CPGGDL LRQ QP K FSE A +FY
Sbjct: 292 EREREILSSLHHPFLPSLIAQVETDKIVGWGIEYCPGGDLRRLRQIQPDKMFSESAIRFY 113
Query: 253 VAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLS 363
AE++LALE+LH GI+YRDLK EN+L++ GHIML+
Sbjct: 112 AAEMVLALEHLHGQGIVYRDLKMENILIQSTGHIMLT 2
>gb|AW290589.1|AW290589 NXNV031H03F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV031H03 5', mRNA sequence
Length = 293
Score = 124 bits (265), Expect = 4e-028
Identities = 53/95 (55%), Positives = 63/95 (66%)
Frame = +1 / +2
Query: 13 FAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL 192
FAMK MDK + +R K+ RA EREI+ +LDHPFLPTLY F+T CL+ +F PGG+L
Sbjct: 8 FAMKAMDKEVMLNRNKVHRACIEREIMATLDHPFLPTLYASFQTKTHVCLITDFAPGGEL 187
Query: 193 HTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLG 297
L RQP K E AA+FYVA ALEYLH G
Sbjct: 188 FMLVDRQPMKVLREDAARFYVAXXXXALEYLHCQG 292
>gb|CD027256.1|CD027256 NXNV031H03 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV031H03 5' similar to Arabidopsis thaliana sequence
At5g58140 non phototropic hypocotyl 1-like (NPL1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 293
Score = 124 bits (265), Expect = 4e-028
Identities = 53/95 (55%), Positives = 63/95 (66%)
Frame = +1 / +2
Query: 13 FAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL 192
FAMK MDK + +R K+ RA EREI+ +LDHPFLPTLY F+T CL+ +F PGG+L
Sbjct: 8 FAMKAMDKEVMLNRNKVHRACIEREIMATLDHPFLPTLYASFQTKTHVCLITDFAPGGEL 187
Query: 193 HTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLG 297
L RQP K E AA+FYVA ALEYLH G
Sbjct: 188 FMLVDRQPMKVLREDAARFYVAXXXXALEYLHCQG 292
>gb|CF401310.1|CF401310 RTWW1_11_E11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_11_E11_A015 5', mRNA sequence
Length = 783
Score = 122 bits (260), Expect = 2e-027
Identities = 50/68 (73%), Positives = 59/68 (86%)
Frame = +1 / +1
Query: 217 GKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVS 396
G+ FS ++A+FY AEVLLALEYLHM+G+IYRDLKPENVLVR+DGHIMLSDFDLS C V+
Sbjct: 1 GRRFSLRSARFYAAEVLLALEYLHMMGVIYRDLKPENVLVRQDGHIMLSDFDLSFTCQVT 180
Query: 397 LTVIKSAN 420
T+ KS N
Sbjct: 181 PTLQKSFN 204
>gb|DR058919.1|DR058919 RTNIT1_14_E01.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_14_E01_A029 5', mRNA sequence
Length = 587
Score = 120 bits (257), Expect = 5e-027
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1 / +2
Query: 238 AAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSLTVIKSA 417
++ +VAEVLLALEYLHMLG++YRDLKPENVLVREDGHIMLSDFDLSLRC VS T++KS
Sbjct: 8 SSSVFVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLVKST 187
Query: 418 NPGLDAMQR 444
+ +D ++
Sbjct: 188 SVDVDMSKK 214
>gb|BX681483.1|BX681483 BX681483 RS Pinus pinaster cDNA clone RS60B09, mRNA sequence
Length = 168
Score = 99.6 bits (211), Expect(2) = 7e-023
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +1 / +3
Query: 139 ETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLA 273
ETDKFSCLVME+CPGGDLH LRQRQPG+ FSEQAA+FY AEVLLA
Sbjct: 33 ETDKFSCLVMEYCPGGDLHILRQRQPGRNFSEQAARFYAAEVLLA 167
Score = 24.4 bits (47), Expect(2) = 7e-023
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 100 LDHPFLPT 123
LDHPFLPT
Sbjct: 4 LDHPFLPT 27
>gb|DR387555.1|DR387555 RTHG1_22_D06.g2_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_22_D06_A029 5', mRNA sequence
Length = 598
Score = 77.1 bits (162), Expect(2) = 1e-022
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +1 / +2
Query: 193 HTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFD 372
H Q Q FSE A+ Y AE++ A+ YLH GI++RDLKPEN+L+ +GH+ L+DF
Sbjct: 341 HLFFQLQRQGLFSEDLARVYAAEIISAVSYLHQNGIVHRDLKPENILLDSEGHVKLTDFG 520
Query: 373 LS 378
L+
Sbjct: 521 LA 526
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +1 / +2
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKVM K + + + ER+I+ + HPF+ L F+T LV +F
Sbjct: 155 TSEIYAMKVMRKDRIMEKNHAEYIKAERDIMTRIVHPFIVQLRYSFQTKHKLYLVSDFIN 334
Query: 181 GGDLHTLRQRQ 213
GG L QRQ
Sbjct: 335 GGHLFFQLQRQ 367
>gb|DR014911.1|DR014911 HEAT1_52_H03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_H03_A029 3', mRNA sequence
Length = 883
Score = 76.2 bits (160), Expect(2) = 3e-022
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +1 / -3
Query: 226 FSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSL 399
FSE+ A+ Y AE++ A+ +LH GII+RDLKPEN+L+ +GH+ML+DF L+ + S+
Sbjct: 245 FSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLAKEVNESM 72
Score = 47.8 bits (98), Expect(2) = 3e-022
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1 / -3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKVM K + + + + ER+IL + HPF+ L F+T L+++F
Sbjct: 464 TNVIYAMKVMKKDKIITGNHVDYMKAERDILTKIVHPFIVQLRYSFQTKSKLYLILDFIN 285
Query: 181 GGDLHTLRQRQ 213
GG L RQ
Sbjct: 284 GGHLFFQLYRQ 252
>gb|CO362980.1|CO362980 RTK1_6_H11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_6_H11_A029 5', mRNA sequence
Length = 842
Score = 76.2 bits (160), Expect(2) = 3e-022
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +1 / +1
Query: 226 FSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSL 399
FSE+ A+ Y AE++ A+ +LH GII+RDLKPEN+L+ +GH+ML+DF L+ + S+
Sbjct: 604 FSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLAKEVNESM 777
Score = 47.8 bits (98), Expect(2) = 3e-022
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKVM K + + + + ER+IL + HPF+ L F+T L+++F
Sbjct: 385 TNVIYAMKVMKKDKIITGNHVDYMKAERDILTKIVHPFIVQLRYSFQTKSKLYLILDFIN 564
Query: 181 GGDLHTLRQRQ 213
GG L RQ
Sbjct: 565 GGHLFFQLYRQ 597
>gb|CF664702.1|CF664702 RTCNT1_11_A07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_11_A07_A029 5', mRNA sequence
Length = 764
Score = 76.2 bits (160), Expect(2) = 3e-022
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +1 / +1
Query: 226 FSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSL 399
FSE+ A+ Y AE++ A+ +LH GII+RDLKPEN+L+ +GH+ML+DF L+ + S+
Sbjct: 457 FSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLAKEVNESM 630
Score = 47.8 bits (98), Expect(2) = 3e-022
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKVM K + + + + ER+IL + HPF+ L F+T L+++F
Sbjct: 238 TNVIYAMKVMKKDKIITGNHVDYMKAERDILTKIVHPFIVQLRYSFQTKSKLYLILDFIN 417
Query: 181 GGDLHTLRQRQ 213
GG L RQ
Sbjct: 418 GGHLFFQLYRQ 450
>gb|DR169202.1|DR169202 RTPHOS1_30_F04.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_30_F04_A029 5', mRNA sequence
Length = 700
Score = 76.2 bits (160), Expect(2) = 3e-022
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +1 / +1
Query: 226 FSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSL 399
FSE+ A+ Y AE++ A+ +LH GII+RDLKPEN+L+ +GH+ML+DF L+ + S+
Sbjct: 499 FSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLAKEVNESM 672
Score = 47.8 bits (98), Expect(2) = 3e-022
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKVM K + + + + ER+IL + HPF+ L F+T L+++F
Sbjct: 280 TNVIYAMKVMKKDKIITGNHVDYMKAERDILTKIVHPFIVQLRYSFQTKSKLYLILDFIN 459
Query: 181 GGDLHTLRQRQ 213
GG L RQ
Sbjct: 460 GGHLFFQLYRQ 492
>gb|CF477770.1|CF477770 RTWW3_9_E01.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_9_E01_A022 5', mRNA sequence
Length = 668
Score = 76.2 bits (160), Expect(2) = 3e-022
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +1 / +3
Query: 226 FSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSL 399
FSE+ A+ Y AE++ A+ +LH GII+RDLKPEN+L+ +GH+ML+DF L+ + S+
Sbjct: 348 FSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLAKEVNESM 521
Score = 47.8 bits (98), Expect(2) = 3e-022
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1 / +3
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKVM K + + + + ER+IL + HPF+ L F+T L+++F
Sbjct: 129 TNVIYAMKVMKKDKIITGNHVDYMKAERDILTKIVHPFIVQLRYSFQTKSKLYLILDFIN 308
Query: 181 GGDLHTLRQRQ 213
GG L RQ
Sbjct: 309 GGHLFFQLYRQ 341
>gb|DR162414.1|DR162414 RTFE1_17_D12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_17_D12_A029 5', mRNA sequence
Length = 655
Score = 76.2 bits (160), Expect(2) = 3e-022
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +1 / -2
Query: 226 FSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSL 399
FSE+ A+ Y AE++ A+ +LH GII+RDLKPEN+L+ +GH+ML+DF L+ + S+
Sbjct: 222 FSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLAKEVNESM 49
Score = 47.8 bits (98), Expect(2) = 3e-022
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1 / -2
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T +AMKVM K + + + + ER+IL + HPF+ L F+T L+++F
Sbjct: 441 TNVIYAMKVMKKDKIITGNHVDYMKAERDILTKIVHPFIVQLRYSFQTKSKLYLILDFIN 262
Query: 181 GGDLHTLRQRQ 213
GG L RQ
Sbjct: 261 GGHLFFQLYRQ 229
>gb|CO164524.1|CO164524 FLD1_48_D01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_D01_A029 5', mRNA sequence
Length = 837
Score = 65.7 bits (137), Expect(2) = 1e-021
Identities = 24/49 (48%), Positives = 37/49 (75%)
Frame = +1 / +2
Query: 229 SEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 375
SE A+FY+AE +LA+ +H I+RD+KP+N+L+ +DGH+ L+DF L
Sbjct: 299 SEDVARFYIAESILAIHSIHKHNYIHRDIKPDNLLLDKDGHMKLTDFGL 445
Score = 56.5 bits (117), Expect(2) = 1e-021
Identities = 23/71 (32%), Positives = 43/71 (60%)
Frame = +1 / +2
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T+ +AMK + K+ + SR ++ ++ER +L +D + L+ F+ ++ L+ME+ P
Sbjct: 77 TQQIYAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDTEYLYLIMEYLP 256
Query: 181 GGDLHTLRQRQ 213
GGD+ TL R+
Sbjct: 257 GGDIMTLLIRE 289
>gb|DR119636.1|DR119636 RTMG1_24_B06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_24_B06_A029 5', mRNA sequence
Length = 688
Score = 76.2 bits (160), Expect(2) = 1e-021
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +1 / +3
Query: 226 FSEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSL 399
FSE+ A+ Y AE++ A+ +LH GII+RDLKPEN+L+ +GH+ML+DF L+ + S+
Sbjct: 216 FSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLAKEVNESM 389
Score = 46.0 bits (94), Expect(2) = 1e-021
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1 / +3
Query: 13 FAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL 192
+AMKVM K + + + ER+IL + HPF+ L F+T L+++F GG L
Sbjct: 9 YAMKVMKKDKIITGNHADYMKAERDILTKIVHPFIVQLRYSFQTKSKLYLILDFINGGHL 188
Query: 193 HTLRQRQ 213
RQ
Sbjct: 189 FFQLYRQ 209
>gb|CF395444.1|CF395444 RTDS2_11_A05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_A05_A021 5', mRNA sequence
Length = 636
Score = 98.7 bits (209), Expect(2) = 3e-021
Identities = 43/79 (54%), Positives = 53/79 (67%)
Frame = +1 / +1
Query: 16 AMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH 195
AMKVM K + ++ RA E EILQ LD+PFLP L+T FE+ S L+M +C GGDL+
Sbjct: 118 AMKVMSKELMQKKRSHKRAWMEEEILQKLDYPFLPKLFTKFESKNHSFLLMSYCSGGDLN 297
Query: 196 TLRQRQPGKYFSEQAAKFY 252
TLRQRQ FSE AA+ Y
Sbjct: 298 TLRQRQKNGRFSESAARRY 354
Score = 23.1 bits (44), Expect(2) = 3e-021
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 243 KVLCS*GAPCIGIPAYAWDYI 305
++LCS C + A AW+++
Sbjct: 496 QILCSRSCACTRVFAPAWNFV 558
>gb|BE209241.1|BE209241 NXNV_147_G05_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_147_G05 5' similar to Arabidopsis thaliana
sequence At5g09890 protein kinase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 570
Score = 65.7 bits (137), Expect(2) = 8e-021
Identities = 24/49 (48%), Positives = 37/49 (75%)
Frame = +1 / +1
Query: 229 SEQAAKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDL 375
SE A+FY+AE +LA+ +H I+RD+KP+N+L+ +DGH+ L+DF L
Sbjct: 319 SEDVARFYIAESILAIHSIHKHNYIHRDIKPDNLLLDKDGHMKLTDFGL 465
Score = 53.8 bits (111), Expect(2) = 8e-021
Identities = 23/71 (32%), Positives = 40/71 (56%)
Frame = +1 / +1
Query: 1 TRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCP 180
T+ +AMK + K+ + SR +ER +L +D + L+ F+ ++ L+ME+ P
Sbjct: 97 TQQIYAMKKLKKSEMLSRGXXEHVXSERNLLAEVDSRCIVKLFYSFQDTEYLYLIMEYLP 276
Query: 181 GGDLHTLRQRQ 213
GGD+ TL R+
Sbjct: 277 GGDIMTLLIRE 309
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 276,879,246
Number of Sequences: 355925
Number of extensions: 4218213
Number of successful extensions: 71931
Number of sequences better than 1.0e-020: 40
length of database: 72,425,745
effective HSP length: 50
effective length of database: 54,629,495
effective search space used: 5517578995
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)