TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBS5e09.xg.2.1
(723 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR112917.1|DR112917 RTS1_31_C10.g1_A029 Roots minus sulf... 101 5e-035
gb|BX676981.1|BX676981 BX676981 RN Pinus pinaster cDNA clon... 106 1e-034
gb|CO159644.1|CO159644 FLD1_14_H03.g1_A029 Root flooded Pin... 93 1e-034
gb|BX253864.1|BX253864 BX253864 Pinus pinaster differenciat... 100 8e-034
gb|DR024455.1|DR024455 STRS1_65_C08.b1_A034 Shoot tip pitch... 98 2e-033
gb|DR024314.1|DR024314 STRS1_64_C03.b1_A034 Shoot tip pitch... 100 4e-033
gb|DR744031.1|DR744031 RTCU1_19_G01.g1_A029 Roots plus adde... 99 5e-033
gb|CO165223.1|CO165223 FLD1_53_D08.b1_A029 Root flooded Pin... 94 1e-032
gb|DR023822.1|DR023822 STRS1_60_F11.b1_A034 Shoot tip pitch... 139 2e-032
gb|CF470473.1|CF470473 RTDS1_17_C10.g1_A015 Drought-stresse... 136 1e-031
gb|CO165060.1|CO165060 FLD1_52_C08.b1_A029 Root flooded Pin... 87 3e-031
gb|CO364236.1|CO364236 RTK1_14_B09.g1_A029 Roots minus pota... 91 3e-031
gb|CF470929.1|CF470929 RTDS1_15_D01.g1_A015 Drought-stresse... 91 3e-031
gb|CF470501.1|CF470501 RTDS1_17_D08.g1_A015 Drought-stresse... 91 3e-031
gb|CF390898.1|CF390898 RTDR3_2_B12.g1_A022 Loblolly pine ro... 86 5e-031
gb|DR094210.1|DR094210 STRR1_13_D08.b1_A033 Stem Response R... 93 5e-030
gb|DR388603.1|DR388603 RTHG1_29_G08.b1_A029 Roots plus adde... 98 5e-030
gb|CO165133.1|CO165133 FLD1_52_C08.g1_A029 Root flooded Pin... 87 7e-030
gb|DR101174.1|DR101174 STRR1_71_C05.b1_A033 Stem Response R... 87 7e-030
gb|DR093166.1|DR093166 STRR1_6_B04.g1_A033 Stem Response Re... 87 7e-030
gb|CO369423.1|CO369423 RTK1_47_B12.b1_A029 Roots minus pota... 87 7e-030
gb|DR020338.1|DR020338 STRS1_36_F03.b1_A034 Shoot tip pitch... 87 7e-030
gb|CO160872.1|CO160872 FLD1_25_E02.b1_A029 Root flooded Pin... 87 7e-030
gb|CO161871.1|CO161871 FLD1_31_E09.g1_A029 Root flooded Pin... 87 7e-030
gb|DR017118.1|DR017118 STRS1_14_E02.b1_A034 Shoot tip pitch... 87 7e-030
gb|DR101844.1|DR101844 STRR1_76_F02.b1_A033 Stem Response R... 87 7e-030
gb|CO158429.1|CO158429 FLD1_6_G10.g1_A029 Root flooded Pinu... 87 7e-030
gb|CO159794.1|CO159794 FLD1_16_A12.b1_A029 Root flooded Pin... 86 1e-029
gb|CF397284.1|CF397284 RTDS3_2_C09.g1_A022 Drought-stressed... 90 2e-029
gb|CO364746.1|CO364746 RTK1_21_C04.g1_A029 Roots minus pota... 92 3e-029
gb|CO160954.1|CO160954 FLD1_25_E02.g1_A029 Root flooded Pin... 84 5e-029
gb|DR017196.1|DR017196 STRS1_14_E02.g1_A034 Shoot tip pitch... 84 5e-029
gb|CO363521.1|CO363521 RTK1_10_F05.b1_A029 Roots minus pota... 86 6e-029
gb|DR015862.1|DR015862 STRS1_6_D07.b1_A034 Shoot tip pitch ... 83 7e-029
gb|CV031446.1|CV031446 RTNACL1_1_D07.g1_A029 Roots plus add... 84 7e-029
gb|DR018577.1|DR018577 STRS1_24_C07.b1_A034 Shoot tip pitch... 91 2e-028
gb|DR068609.1|DR068609 RTDK1_1_G05.g1_A029 Roots, dark Pinu... 93 4e-028
gb|DR068520.1|DR068520 RTDK1_1_G05.b1_A029 Roots, dark Pinu... 93 4e-028
gb|CO366516.1|CO366516 RTK1_28_G11.b1_A029 Roots minus pota... 88 8e-028
gb|DR180536.1|DR180536 RTMNUT1_33_F10.b1_A029 Roots minus m... 88 8e-028
gb|CO176349.1|CO176349 NDL1_61_A07.g1_A029 Needles control ... 88 8e-028
gb|CO159636.1|CO159636 FLD1_14_G06.g1_A029 Root flooded Pin... 88 8e-028
gb|BQ699997.1|BQ699997 NXRV132_G06_F NXRV (Nsf Xylem Root w... 88 8e-028
gb|DR117368.1|DR117368 RTMG1_6_C05.g1_A029 Roots minus magn... 88 1e-027
gb|DR117403.1|DR117403 RTMG1_6_F06.g1_A029 Roots minus magn... 89 1e-027
gb|CF403057.1|CF403057 RTWW1_24_E04.g1_A015 Well-watered lo... 93 1e-027
gb|BX250474.1|BX250474 BX250474 Pinus pinaster differenciat... 88 1e-027
gb|DR385544.1|DR385544 RTHG1_9_G06.b1_A029 Roots plus added... 87 3e-027
gb|DR023554.1|DR023554 STRS1_58_A10.g1_A034 Shoot tip pitch... 78 3e-027
gb|DR015938.1|DR015938 STRS1_6_D07.g1_A034 Shoot tip pitch ... 77 4e-027
gb|CF392294.1|CF392294 RTDR3_7_D10.b1_A022 Loblolly pine ro... 101 5e-027
gb|DR099835.1|DR099835 STRR1_59_B12.b1_A033 Stem Response R... 82 1e-026
gb|DR018619.1|DR018619 STRS1_24_A10.g1_A034 Shoot tip pitch... 82 1e-026
gb|DR385279.1|DR385279 RTHG1_7_E09.g1_A029 Roots plus added... 74 1e-026
gb|DR099649.1|DR099649 STRR1_57_D02.b1_A033 Stem Response R... 87 1e-026
gb|DR385195.1|DR385195 RTHG1_7_E09.b1_A029 Roots plus added... 81 1e-026
gb|BX255284.1|BX255284 BX255284 Pinus pinaster differenciat... 101 1e-026
gb|DR024108.1|DR024108 STRS1_62_A06.g1_A034 Shoot tip pitch... 90 2e-026
gb|CF397459.1|CF397459 RTDS3_3_C06.g1_A022 Drought-stressed... 91 2e-026
gb|DR072788.1|DR072788 RTDK1_28_D01.g1_A029 Roots, dark Pin... 90 2e-026
gb|DR015813.1|DR015813 STRS1_5_F11.g1_A034 Shoot tip pitch ... 90 3e-026
gb|CO161081.1|CO161081 FLD1_26_C01.g1_A029 Root flooded Pin... 84 3e-026
gb|CX649821.1|CX649821 COLD1_41_E05.g1_A029 Root cold Pinus... 79 3e-026
gb|CO164784.1|CO164784 FLD1_50_G01.b1_A029 Root flooded Pin... 87 5e-026
gb|CO159223.1|CO159223 FLD1_12_F05.b1_A029 Root flooded Pin... 87 5e-026
gb|DR096724.1|DR096724 STRR1_29_H01.g1_A033 Stem Response R... 74 5e-026
gb|DR015919.1|DR015919 STRS1_6_B08.g1_A034 Shoot tip pitch ... 84 9e-026
gb|DR069312.1|DR069312 RTDK1_6_H08.b1_A029 Roots, dark Pinu... 82 9e-026
gb|DR110554.1|DR110554 RTS1_11_C05.g1_A029 Roots minus sulf... 81 1e-025
gb|DR060675.1|DR060675 RTNIT1_29_G03.b1_A029 Roots minus ni... 99 2e-025
gb|DT631207.1|DT631207 EST1146138 Normalized pine embryo li... 81 3e-025
gb|DR054231.1|DR054231 RTCA1_16_B10.b1_A029 Roots minus cal... 90 6e-025
gb|CF386446.1|CF386446 RTDR1_14_C12.g1_A015 Loblolly pine r... 61 6e-025
gb|DR385625.1|DR385625 RTHG1_9_G06.g1_A029 Roots plus added... 87 8e-025
gb|DR024523.1|DR024523 STRS1_65_C06.g1_A034 Shoot tip pitch... 114 1e-024
gb|CX649739.1|CX649739 COLD1_41_E05.b1_A029 Root cold Pinus... 67 1e-024
gb|DR094529.1|DR094529 STRR1_15_D08.b1_A033 Stem Response R... 82 1e-024
gb|DR094610.1|DR094610 STRR1_15_D08.g1_A033 Stem Response R... 82 1e-024
gb|BX255181.1|BX255181 BX255181 Pinus pinaster differenciat... 104 1e-024
gb|CO364178.1|CO364178 RTK1_14_E02.b1_A029 Roots minus pota... 60 2e-024
gb|DR744088.1|DR744088 RTCU1_20_D07.b1_A029 Roots plus adde... 88 3e-024
gb|DR101682.1|DR101682 STRR1_75_C03.b1_A033 Stem Response R... 84 5e-024
gb|CO159443.1|CO159443 FLD1_13_D05.g1_A029 Root flooded Pin... 85 5e-024
gb|BF220696.1|BF220696 NXCI_151_G07_F NXCI (Nsf Xylem Compr... 72 5e-024
gb|CF471631.1|CF471631 RTDS1_4_B06.g1_A015 Drought-stressed... 71 5e-024
gb|CF474107.1|CF474107 RTWW2_18_C05.g1_A021 Well-watered lo... 71 7e-024
gb|CO159361.1|CO159361 FLD1_13_D05.b1_A029 Root flooded Pin... 85 7e-024
gb|CF470928.1|CF470928 RTDS1_15_E03.g1_A015 Drought-stresse... 85 7e-024
gb|CO176572.1|CO176572 NDL1_62_G03.g1_A029 Needles control ... 98 1e-023
gb|DR167350.1|DR167350 RTPHOS1_18_F11.b1_A029 Roots minus p... 71 1e-023
gb|DR181918.1|DR181918 RTMNUT1_41_F12.g1_A029 Roots minus m... 71 1e-023
gb|CF396075.1|CF396075 RTDS2_13_A03.g1_A021 Drought-stresse... 71 1e-023
gb|CF472572.1|CF472572 RTDS1_10_C02.g1_A015 Drought-stresse... 71 1e-023
gb|CF397219.1|CF397219 RTDS3_2_G04.b2_A022 Drought-stressed... 71 1e-023
gb|CV033205.1|CV033205 RTNACL1_33_B10.b1_A029 Roots plus ad... 71 2e-023
gb|DR019261.1|DR019261 STRS1_28_F11.g1_A034 Shoot tip pitch... 71 2e-023
gb|CO172600.1|CO172600 NDL1_30_E11.g1_A029 Needles control ... 71 2e-023
gb|CF387087.1|CF387087 RTDR1_10_C07.g1_A015 Loblolly pine r... 71 2e-023
gb|CF398051.1|CF398051 RTDS3_22_D05.b1_A022 Drought-stresse... 72 2e-023
gb|DR019177.1|DR019177 STRS1_28_F11.b2_A034 Shoot tip pitch... 71 3e-023
gb|CF386347.1|CF386347 RTDR1_13_F04.g1_A015 Loblolly pine r... 70 4e-023
gb|CF385056.1|CF385056 RTDR1_1_E08.g1_A015 Loblolly pine ro... 70 4e-023
dbj|BD224494.1| Materials and methods for the modification ... 101 5e-023
gb|DR023481.1|DR023481 STRS1_58_A10.b1_A034 Shoot tip pitch... 81 5e-023
gb|DR017735.1|DR017735 STRS1_18_D10.b1_A034 Shoot tip pitch... 77 9e-023
gb|DT626044.1|DT626044 EST1157968 Sequencing ESTs from lobl... 72 2e-022
gb|CV134986.1|CV134986 EST846195 Sequencing ESTs from loblo... 72 2e-022
gb|DR021519.1|DR021519 STRS1_45_E08.b1_A034 Shoot tip pitch... 72 2e-022
gb|DR015214.1|DR015214 STRS1_2_D11.b1_A034 Shoot tip pitch ... 71 2e-022
gb|DR694987.1|DR694987 EST1085080 Normalized pine embryo li... 77 2e-022
gb|DR743959.1|DR743959 RTCU1_19_G01.b1_A029 Roots plus adde... 99 2e-022
gb|DT638838.1|DT638838 EST1153769 Normalized pine embryo li... 77 2e-022
gb|DR088632.1|DR088632 RTAL1_3_G06.b1_A029 Roots plus added... 77 2e-022
gb|CO161650.1|CO161650 FLD1_30_F08.b1_A029 Root flooded Pin... 76 4e-022
gb|CF667004.1|CF667004 RTCNT1_27_C11.g1_A029 Root control P... 71 4e-022
gb|DR078636.1|DR078636 RTFEPL1_6_A05.b1_A029 Roots plus add... 50 5e-022
gb|CO201469.1|CO201469 RTCNT2_6_A10.b1_A029 Root control 2 ... 73 5e-022
gb|CF478552.1|CF478552 RTWW3_20_C12.g1_A022 Well-watered lo... 72 8e-022
gb|CF403096.1|CF403096 RTWW1_24_D09.g1_A015 Well-watered lo... 71 8e-022
gb|DR168289.1|DR168289 RTPHOS1_24_B04.g1_A029 Roots minus p... 87 1e-021
gb|DR018139.1|DR018139 STRS1_20_E09.g1_A034 Shoot tip pitch... 68 1e-021
gb|BX680435.1|BX680435 BX680435 RS Pinus pinaster cDNA clon... 73 3e-021
gb|BE187204.1|BE187204 NXNV_160_E12_F Nsf Xylem Normal wood... 101 5e-021
gb|BE187215.1|BE187215 NXNV_160_F11_F Nsf Xylem Normal wood... 101 5e-021
gb|CO171082.1|CO171082 NDL1_18_H08.g1_A029 Needles control ... 61 7e-021
gb|CV034765.1|CV034765 RTNACL1_11_A09.g1_A029 Roots plus ad... 70 8e-021
gb|DR098127.1|DR098127 STRR1_39_F11.b1_A033 Stem Response R... 69 9e-021
gb|DR112392.1|DR112392 RTS1_27_H07.g1_A029 Roots minus sulf... 63 9e-021
>gb|DR112917.1|DR112917 RTS1_31_C10.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_31_C10_A029 5', mRNA sequence
Length = 622
Score = 101 bits (215), Expect(2) = 5e-035
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F+ V+ R ++ WAPQ +VL+HP+VGG TH+GWNSTLESI GVPM+S P+ +
Sbjct: 357 LPSEFLEKVKDRSFLVRWAPQMKVLSHPSVGGFLTHSGWNSTLESICAGVPMISWPLLAE 536
Query: 586 QXPTXXYVCDVWXIXVLLXXVL 651
Q +V VW I + + V+
Sbjct: 537 QPTNRKFVSGVWNIGMAMNEVV 602
Score = 66.9 bits (140), Expect(2) = 5e-035
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +1 / +3
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
SL +++ CM+WLD + P SV+Y+ FGS+ +T EL+E+AWGL S PF
Sbjct: 159 SLWTEETECMKWLDCQKPCSVIYICFGSIAVMTDQELLELAWGLEASRQPF 311
>gb|BX676981.1|BX676981 BX676981 RN Pinus pinaster cDNA clone RN15E7, mRNA sequence
Length = 565
Score = 106 bits (226), Expect(2) = 1e-034
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F+ V+ R ++ WAPQ +VL+HP+VGG TH+GWNSTLESIY GVPM+S P F +
Sbjct: 184 LPPEFLEKVKDRSFLVSWAPQIKVLSHPSVGGFLTHSGWNSTLESIYAGVPMISWPFFAE 363
Query: 586 QXPTXXYVCDVWXIXVLLXXVL 651
Q +V +VW I + + V+
Sbjct: 364 QQTNRRFVSEVWKIGMEMNEVV 429
Score = 60.5 bits (126), Expect(2) = 1e-034
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C++WL+++ P SV+YV FGS+ ++ ELVE AWGL S PF
Sbjct: 10 CVKWLNSQEPSSVIYVCFGSITVISDKELVEFAWGLEASKQPF 138
>gb|CO159644.1|CO159644 FLD1_14_H03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_H03_A029 5', mRNA sequence
Length = 773
Score = 93.4 bits (198), Expect(3) = 1e-034
Identities = 36/72 (50%), Positives = 46/72 (63%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F+ + RG + WAPQ +VL HP+VGG TH+GWNST+ESI GVPM+ P F +
Sbjct: 557 LPRDFIERSKNRGFFVSWAPQYKVLCHPSVGGFLTHSGWNSTVESICAGVPMMCWPFFAE 736
Query: 586 QXPTXXYVCDVW 621
Q +V VW
Sbjct: 737 QQTNRRFVDHVW 772
Score = 64.2 bits (134), Expect(3) = 1e-034
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +1 / +2
Query: 181 SNDGADETSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+ D T++ ++ C++WLD + SV+YV FGS+ +T +EL+E AWGL S PF
Sbjct: 335 AGDTTVNTNVWKEETQCLDWLDKQRVSSVVYVCFGSITVLTNEELIEFAWGLEASNKPF 511
Score = 27.1 bits (53), Expect(3) = 1e-034
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1 / +2
Query: 37 ESTTNSSGAILNTFEDLESRELEMIRDELADR 132
++T +S +LNTF+DLE L + +L+ +
Sbjct: 209 QNTLQASLLLLNTFDDLEGPVLRDLNSKLSGK 304
>gb|BX253864.1|BX253864 BX253864 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP089F10 similar to Flavonol 3 O
glucosyltransferase, mRNA sequence
Length = 687
Score = 99.8 bits (212), Expect(2) = 8e-034
Identities = 37/72 (51%), Positives = 49/72 (68%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F+ + RG ++ WAPQ +VL+HP+VGG TH+GWNSTLESI GVPM+ P F +
Sbjct: 284 LPKEFVEETKDRGVLVGWAPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMMCWPFFAE 463
Query: 586 QXPTXXYVCDVW 621
Q +VC+ W
Sbjct: 464 QETNAKFVCEEW 499
Score = 64.2 bits (134), Expect(2) = 8e-034
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +1 / +2
Query: 193 ADETSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+DE SL ++ C+ WLD R P SVLYV GS+ ++ ++L+E AWGLA++ F
Sbjct: 74 SDELSLWKEESGCLTWLDTRKPCSVLYVCLGSLAVMSNEQLLEFAWGLASTNQSF 238
>gb|DR024455.1|DR024455 STRS1_65_C08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_65_C08_A034 3', mRNA sequence
Length = 825
Score = 97.6 bits (207), Expect(3) = 2e-033
Identities = 38/78 (48%), Positives = 50/78 (64%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP ++ V+ R WAPQ VL+HP+VGG TH+GWNSTLESI GVPM+S P F +
Sbjct: 307 LPHEYLEKVKDRSFFASWAPQMTVLSHPSVGGFLTHSGWNSTLESICAGVPMISWPFFSE 128
Query: 586 QXPTXXYVCDVWXIXVLL 639
Q +V +VW I + +
Sbjct: 127 QPTNRRFVSEVWKIGLAM 74
Score = 61.4 bits (128), Expect(3) = 2e-033
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +1 / -3
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
SL +++ C++WLD++ P SV+YV FGS ++ +EL+E AWGL S PF
Sbjct: 505 SLWAEETGCVKWLDSQDPCSVIYVCFGSFTVMSEEELLEFAWGLEASRQPF 353
Score = 22.1 bits (42), Expect(3) = 2e-033
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +1 / -3
Query: 37 ESTTNSSGAILNTFEDLESRELEMIRDEL 123
++T + ILNTF++L+ ++ ++ L
Sbjct: 667 QATLEADLVILNTFDELDRPVVDALQKRL 581
>gb|DR024314.1|DR024314 STRS1_64_C03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_C03_A034 3', mRNA sequence
Length = 729
Score = 100 bits (213), Expect(2) = 4e-033
Identities = 38/74 (51%), Positives = 48/74 (64%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP FM +GRG + WAPQ VL+HP+VGG TH+GWNST+ESI GVPM+ P F +
Sbjct: 193 LPQDFMERSQGRGFFVTWAPQSRVLSHPSVGGFLTHSGWNSTVESICAGVPMICWPFFAE 372
Query: 586 QXPTXXYVCDVWXI 627
Q +V +W I
Sbjct: 373 QQTNRRFVDHIWKI 414
Score = 61.4 bits (128), Expect(2) = 4e-033
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C+EWLD + SV+YVSFGS+ ++ ++L E AWGL S +PF
Sbjct: 19 CLEWLDEQRVSSVMYVSFGSITVISDEQLREFAWGLEASNLPF 147
>gb|DR744031.1|DR744031 RTCU1_19_G01.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_19_G01_A029 5', mRNA sequence
Length = 795
Score = 98.9 bits (210), Expect(2) = 5e-033
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F+ + RG ++ W PQ +VL+HP+VGG TH+GWNSTLESI GVPM+ P + +
Sbjct: 356 LPKEFIEETKDRGLLVGWVPQIKVLSHPSVGGFLTHSGWNSTLESISAGVPMICWPFYAE 535
Query: 586 QXPTXXYVCDVWXIXVLL 639
Q +VC+ W I + L
Sbjct: 536 QHTNAKFVCEEWSIGLHL 589
Score = 62.3 bits (130), Expect(2) = 5e-033
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +1 / +2
Query: 193 ADETSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+DE S+ ++ C+ WLD++ P SV+YV GS+ ++ +L+E AWGLA+S F
Sbjct: 146 SDELSMWKEENSCLTWLDSQNPCSVMYVCLGSITVLSNQQLLEFAWGLASSNQHF 310
>gb|CO165223.1|CO165223 FLD1_53_D08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_53_D08_A029 3', mRNA sequence
Length = 833
Score = 93.9 bits (199), Expect(2) = 1e-032
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP + V+ R ++ WAPQ +VL+HP+VG TH+GWNSTLESI GVPM+S P +
Sbjct: 333 LPSEILEKVKDRSFLVGWAPQMKVLSHPSVGSFLTHSGWNSTLESICAGVPMISWPFLAE 512
Query: 586 QXPTXXYVCDVWXIXVLLXXVL 651
Q +V VW I + + V+
Sbjct: 513 QPTNRRFVSGVWNIGMAMNEVV 578
Score = 66.0 bits (138), Expect(2) = 1e-032
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = +1 / +3
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
SL +++ CM+WLD++ P SV+Y+ FGS+ +T EL+E+AWG+ S PF
Sbjct: 135 SLWTEETECMKWLDSQKPYSVIYICFGSIAVMTNQELLELAWGIEASKQPF 287
>gb|DR023822.1|DR023822 STRS1_60_F11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_60_F11_A034 3', mRNA sequence
Length = 844
Score = 139 bits (299), Expect = 2e-032
Identities = 61/131 (46%), Positives = 75/131 (57%)
Frame = +1 / -3
Query: 235 EWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPFXXXXXXXXXXXXDKQELPD 414
EWLDA+ GSV+Y+SFGS+VHVT +L EIA GL SG F L D
Sbjct: 500 EWLDAKPTGSVIYISFGSMVHVTKAQLEEIAMGLKESGQFFLWAKRPDIVSSTVSDSLLD 321
Query: 415 GFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGDQXP 594
GF+ E +G V+ W Q +VL+HP+V G TH GWNS LESI GVPM+ P + DQ
Sbjct: 320 GFLNETEKQGLVVPWCNQVQVLSHPSVAGFITHCGWNSMLESIALGVPMIGFPFWADQFT 141
Query: 595 TXXYVCDVWXI 627
+ D W I
Sbjct: 140 NSKLMADEWKI 108
>gb|CF470473.1|CF470473 RTDS1_17_C10.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_17_C10_A015 5', mRNA sequence
Length = 725
Score = 136 bits (293), Expect = 1e-031
Identities = 60/133 (45%), Positives = 77/133 (57%)
Frame = +1 / +2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPFXXXXXXXXXXXXDKQEL 408
C +WLDA+ SVLYVSFGS+V VT +L EIA GL +SG F L
Sbjct: 47 CSKWLDAKPNRSVLYVSFGSMVFVTKAQLDEIAMGLKDSGQLFLWALRPDIVSSTVSDGL 226
Query: 409 PDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGDQ 588
P GF+ ++G+G V+ W Q +VL+HP+V G TH GWNS LESI GVP++ P + DQ
Sbjct: 227 PHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPIVGFPFWADQ 406
Query: 589 XPTXXYVCDVWXI 627
+ D W I
Sbjct: 407 FTNSKLMADEWKI 445
>gb|CO165060.1|CO165060 FLD1_52_C08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_C08_A029 3', mRNA sequence
Length = 898
Score = 86.6 bits (183), Expect(3) = 3e-031
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 354 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 533
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 534 QFTNCKLMADEWKIGFRLSGV 596
Score = 64.2 bits (134), Expect(3) = 3e-031
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 177 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 296
Score = 22.5 bits (43), Expect(3) = 3e-031
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 52 SSGAILNTFEDLESRELEM 108
+ G + N+F+DLES+ + +
Sbjct: 15 ADGVLGNSFDDLESKAVSL 71
>gb|CO364236.1|CO364236 RTK1_14_B09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_B09_A029 5', mRNA sequence
Length = 879
Score = 91.2 bits (193), Expect(2) = 3e-031
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ ++G+G V+ W Q +VL+HP+V G TH GWNS LESI GVPM+ P++ D
Sbjct: 487 LPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPMVGFPLWAD 308
Query: 586 QXPTXXYVCDVWXI 627
Q + D W I
Sbjct: 307 QFTNSKLMVDEWKI 266
Score = 64.2 bits (134), Expect(2) = 3e-031
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +1 / -3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C EWLDA+ SVLYVSFGS+VHVT +L EIA GL +SG F
Sbjct: 664 CSEWLDAKPNRSVLYVSFGSMVHVTKAQLEEIAMGLKDSGQLF 536
>gb|CF470929.1|CF470929 RTDS1_15_D01.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_15_D01_A015 5', mRNA sequence
Length = 782
Score = 91.2 bits (193), Expect(2) = 3e-031
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ ++G+G V+ W Q +VL+HP+V G TH GWNS LESI GVPM+ P++ D
Sbjct: 290 LPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPMVGFPLWAD 469
Query: 586 QXPTXXYVCDVWXI 627
Q + D W I
Sbjct: 470 QFTNSKLMVDEWKI 511
Score = 64.2 bits (134), Expect(2) = 3e-031
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +1 / +2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C EWLDA+ SVLYVSFGS+VHVT +L EIA GL +SG F
Sbjct: 113 CSEWLDAKPNRSVLYVSFGSMVHVTKAQLEEIAMGLKDSGQLF 241
>gb|CF470501.1|CF470501 RTDS1_17_D08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_17_D08_A015 5', mRNA sequence
Length = 677
Score = 91.2 bits (193), Expect(2) = 3e-031
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ ++G+G V+ W Q +VL+HP+V G TH GWNS LESI GVPM+ P++ D
Sbjct: 318 LPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPMVGFPLWAD 497
Query: 586 QXPTXXYVCDVWXI 627
Q + D W I
Sbjct: 498 QFTNSKLMVDEWKI 539
Score = 64.2 bits (134), Expect(2) = 3e-031
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +1 / +3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C EWLDA+ SVLYVSFGS+VHVT +L EIA GL +SG F
Sbjct: 141 CSEWLDAKPNRSVLYVSFGSMVHVTKAQLEEIAMGLKDSGQLF 269
>gb|CF390898.1|CF390898 RTDR3_2_B12.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_2_B12_A022 5', mRNA
sequence
Length = 776
Score = 86.1 bits (182), Expect(3) = 5e-031
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LPDGF+ V +G V+ W Q +VL+H +V G TH GWNS LE+I GVPML P + D
Sbjct: 385 LPDGFLDEVGSQGLVVPWCNQLQVLSHSSVAGFITHCGWNSMLEAIALGVPMLGFPFWAD 564
Query: 586 QXPTXXYVCDVWXI 627
Q ++ D W +
Sbjct: 565 QFTNCKFMADEWKL 606
Score = 64.2 bits (134), Expect(3) = 5e-031
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1 / +1
Query: 184 NDGADETSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
N+ + L + C EWL+ + GSV+YVSFGS++HV+ D+L EIA GL + PF
Sbjct: 163 NENMRTGTSLCAEHDCSEWLNTKPNGSVIYVSFGSLIHVSKDQLKEIAMGLRDGRQPF 336
Score = 22.1 bits (42), Expect(3) = 5e-031
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +1 / +1
Query: 28 RATESTTNSSGAILNTFEDLES 93
++ +S+ + + N+F+DLES
Sbjct: 7 KSLQSSREADWVLCNSFDDLES 72
>gb|DR094210.1|DR094210 STRR1_13_D08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_13_D08_A033 3', mRNA sequence
Length = 775
Score = 92.5 bits (196), Expect(2) = 5e-030
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP+GF + R ++WAPQ +VLAH AVG TH GWNSTLESI GVP++ P FGD
Sbjct: 220 LPEGFEERTKDRALFVQWAPQLKVLAHAAVGLFITHCGWNSTLESISLGVPVVGLPYFGD 399
Query: 586 QXPTXXYVCDVWXI 627
Q + DVW I
Sbjct: 400 QFLHCRFAKDVWKI 441
Score = 58.7 bits (122), Expect(2) = 5e-030
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +1 / +1
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+SLL + C+ WLD + P SV+Y+SFGS+ + ++L ++A GL +G PF
Sbjct: 19 SSLLEEYEGCLTWLDMQQPASVIYISFGSIAVKSQEQLQQLAIGLEGTGQPF 174
>gb|DR388603.1|DR388603 RTHG1_29_G08.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_29_G08_A029 3', mRNA sequence
Length = 712
Score = 97.6 bits (207), Expect(2) = 5e-030
Identities = 35/75 (46%), Positives = 51/75 (68%)
Frame = +1 / -3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
++ LP+GF+A + G+G V+ W PQ +VL+H +VG TH GWNSTLES+ GVP+L+ P
Sbjct: 410 EENLPEGFLAEISGQGLVVPWCPQLQVLSHASVGAFMTHCGWNSTLESLTMGVPLLAVPQ 231
Query: 577 FGDQXPTXXYVCDVW 621
+ DQ Y+ + W
Sbjct: 230 WSDQTTNSRYIGEEW 186
Score = 53.6 bits (111), Expect(2) = 5e-030
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1 / -3
Query: 169 LTAVSNDGADETSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
L ++D D + + + C++WL+ + P SV+Y+SFGSV ++ ++ EIA GL SG
Sbjct: 644 LDVQNDDDTDFGADMWKTTNCVDWLNTKEPASVVYISFGSVAVLSAEQTEEIALGLKASG 465
Query: 349 VPF 357
F
Sbjct: 464 YSF 456
>gb|CO165133.1|CO165133 FLD1_52_C08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_C08_A029 5', mRNA sequence
Length = 899
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 383 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 562
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 563 QFTNCKLMADEWKIGFRLSGV 625
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 206 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 325
>gb|DR101174.1|DR101174 STRR1_71_C05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_71_C05_A033 3', mRNA sequence
Length = 876
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 223 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 402
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 403 QFTNCKLMADEWKIGFRLSGV 465
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 46 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 165
>gb|DR093166.1|DR093166 STRR1_6_B04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_6_B04_A033 5', mRNA sequence
Length = 865
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 488 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 667
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 668 QFTNCKLMADEWKIGFRLSGV 730
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 311 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 430
>gb|CO369423.1|CO369423 RTK1_47_B12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_47_B12_A029 3', mRNA sequence
Length = 854
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 349 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 528
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 529 QFTNCKLMADEWKIGFRLSGV 591
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 172 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 291
>gb|DR020338.1|DR020338 STRS1_36_F03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_F03_A034 3', mRNA sequence
Length = 844
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 204 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 383
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 384 QFTNCKLMADEWKIGFRLSGV 446
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 27 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 146
>gb|CO160872.1|CO160872 FLD1_25_E02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_25_E02_A029 3', mRNA sequence
Length = 822
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 316 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 495
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 496 QFTNCKLMADEWKIGFRLSGV 558
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 139 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 258
>gb|CO161871.1|CO161871 FLD1_31_E09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_31_E09_A029 5', mRNA sequence
Length = 816
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 565 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 744
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 745 QFTNCKLMADEWKIGFRLSGV 807
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 388 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 507
>gb|DR017118.1|DR017118 STRS1_14_E02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_14_E02_A034 3', mRNA sequence
Length = 776
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 228 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 407
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 408 QFTNCKLMADEWKIGFRLSGV 470
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 51 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 170
>gb|DR101844.1|DR101844 STRR1_76_F02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_76_F02_A033 3', mRNA sequence
Length = 772
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 223 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 402
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 403 QFTNCKLMADEWKIGFRLSGV 465
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 46 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 165
>gb|CO158429.1|CO158429 FLD1_6_G10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_G10_A029 5', mRNA sequence
Length = 696
Score = 86.6 bits (183), Expect(2) = 7e-030
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 347 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 526
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 527 QFTNCKLMADEWKIGFRLSGV 589
Score = 64.2 bits (134), Expect(2) = 7e-030
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 170 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 289
>gb|CO159794.1|CO159794 FLD1_16_A12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_16_A12_A029 3', mRNA sequence
Length = 765
Score = 85.7 bits (181), Expect(2) = 1e-029
Identities = 35/74 (47%), Positives = 46/74 (62%)
Frame = +1 / -2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 227 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 48
Query: 586 QXPTXXYVCDVWXI 627
Q + D W I
Sbjct: 47 QFTNXQLMADEWKI 6
Score = 64.2 bits (134), Expect(2) = 1e-029
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / -2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 404 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 285
>gb|CF397284.1|CF397284 RTDS3_2_C09.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_2_C09_A022 5', mRNA sequence
Length = 736
Score = 89.8 bits (190), Expect(2) = 2e-029
Identities = 35/74 (47%), Positives = 45/74 (60%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LPD F+ +E +G V+ W Q +VL+HP+V G TH GWNS LESI GVPM+ P + D
Sbjct: 321 LPDAFLDEIERQGLVVPWCNQLQVLSHPSVAGFITHCGWNSMLESISRGVPMIGFPFWAD 500
Query: 586 QXPTXXYVCDVWXI 627
Q + D W I
Sbjct: 501 QFTNCKLMADEWKI 542
Score = 59.6 bits (124), Expect(2) = 2e-029
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / +3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ SV+YVSFGS++H T +L EIA GL +SG
Sbjct: 144 CSEWLDAKPTCSVIYVSFGSLIHATMAQLDEIAMGLKDSG 263
>gb|CO364746.1|CO364746 RTK1_21_C04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_21_C04_A029 5', mRNA sequence
Length = 842
Score = 91.6 bits (194), Expect(2) = 3e-029
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LPDGF + R + WAPQ +VLAH +VG TH GWNSTLESI GVP++ P F D
Sbjct: 179 LPDGFEERTKDRALFVTWAPQVKVLAHTSVGLFFTHGGWNSTLESISMGVPVVGLPYFAD 358
Query: 586 QXPTXXYVCDVWXI 627
Q + DVW I
Sbjct: 359 QYLNCRFAKDVWEI 400
Score = 57.3 bits (119), Expect(2) = 3e-029
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +1 / +2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C+ WLD + P SV+YVSFGSV + ++L ++A GL SG PF
Sbjct: 5 CLTWLDLQQPASVIYVSFGSVAVKSQEQLQQLALGLEGSGQPF 133
>gb|CO160954.1|CO160954 FLD1_25_E02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_25_E02_A029 5', mRNA sequence
Length = 883
Score = 83.8 bits (177), Expect(2) = 5e-029
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 667 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 846
Query: 586 QXPTXXYVCDVW 621
Q + D W
Sbjct: 847 QFTNCKLMADEW 882
Score = 64.2 bits (134), Expect(2) = 5e-029
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 490 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 609
>gb|DR017196.1|DR017196 STRS1_14_E02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_14_E02_A034 5', mRNA sequence
Length = 656
Score = 83.8 bits (177), Expect(2) = 5e-029
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 438 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 617
Query: 586 QXPTXXYVCDVW 621
Q + D W
Sbjct: 618 QFTNCKLMADEW 653
Score = 64.2 bits (134), Expect(2) = 5e-029
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 261 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 380
>gb|CO363521.1|CO363521 RTK1_10_F05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_10_F05_A029 3', mRNA sequence
Length = 863
Score = 86.1 bits (182), Expect(3) = 6e-029
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F+ +G V++W+ Q +VL+HP+VGG TH GWNS LES+ GVPML+ P+F D
Sbjct: 362 LPKEFVEETRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLSFGVPMLAFPLFTD 541
Query: 586 QXPTXXYVCDVWXI 627
Q + + W +
Sbjct: 542 QCTNRWLIVEEWGV 583
Score = 55.0 bits (114), Expect(3) = 6e-029
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +1 / +2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD++ SV+Y+SFGS+ HV+ ++ E+A GL S PF
Sbjct: 185 CTGWLDSQGKNSVIYISFGSLAHVSRAQIEEVAMGLVESKQPF 313
Score = 24.4 bits (47), Expect(3) = 6e-029
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 37 ESTTNSSGAILNTFEDLESRELEMIRDE 120
+S + I NT EDLESR + ++ +
Sbjct: 5 QSVRGADWIIANTVEDLESRTIAELQSK 88
>gb|DR015862.1|DR015862 STRS1_6_D07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_D07_A034 3', mRNA sequence
Length = 890
Score = 82.9 bits (175), Expect(2) = 7e-029
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF + R + WAPQ +VLAHP+VG TH GWNS LE++ GVP++ P F D
Sbjct: 233 LPKGFEERTKKRALFVRWAPQVKVLAHPSVGLFLTHCGWNSMLENLGMGVPVVGFPYFAD 412
Query: 586 QXPTXXYVCDVWXI 627
Q + +VW I
Sbjct: 413 QFLNCRFAKEVWNI 454
Score = 64.6 bits (135), Expect(2) = 7e-029
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +1 / +2
Query: 193 ADETSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
A SL ++ C+ WLD + PGSV+Y+SFGS+ + +L ++A GL NSG PF
Sbjct: 23 ASGCSLWEEEEGCLTWLDMQRPGSVIYISFGSIAVKSKQQLEQLALGLENSGQPF 187
>gb|CV031446.1|CV031446 RTNACL1_1_D07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_1_D07_A029 5', mRNA sequence
Length = 734
Score = 84.3 bits (178), Expect(2) = 7e-029
Identities = 37/74 (50%), Positives = 45/74 (60%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
L +GF + R ++WAPQ +VLAH AVG TH GWNSTLESI GVP++ P F D
Sbjct: 357 LLEGFEERTKDRTLFVQWAPQLKVLAHAAVGLFITHCGWNSTLESISLGVPVVGLPYFAD 536
Query: 586 QXPTXXYVCDVWXI 627
Q + DVW I
Sbjct: 537 QFLHCRFAKDVWKI 578
Score = 63.3 bits (132), Expect(2) = 7e-029
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +1 / +3
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+SLL +D C+ WLD + P SV+Y+SFGS+ + ++L ++A GL +G PF
Sbjct: 156 SSLLEEDEGCLTWLDMQQPASVIYISFGSIAVKSQEQLQQLALGLEGTGQPF 311
>gb|DR018577.1|DR018577 STRS1_24_C07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_24_C07_A034 3', mRNA sequence
Length = 823
Score = 91.2 bits (193), Expect(2) = 2e-028
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1 / +1
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
++ LP GF+ G+G V+ W Q +VL+H +VG TH GWNSTLES+ GVPML P
Sbjct: 241 EENLPAGFLNETSGQGLVVPWCHQLQVLSHASVGAFMTHCGWNSTLESLSLGVPMLVIPQ 420
Query: 577 FGDQXPTXXYVCDVWXIXVLL 639
+ DQ YV + W + + L
Sbjct: 421 WSDQSTNSAYVAEKWMVGMRL 483
Score = 55.0 bits (114), Expect(2) = 2e-028
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
CM+WL+ + P SV+YVSFGS+ ++ +++ EIA GL SG F
Sbjct: 67 CMDWLNTKEPASVVYVSFGSLAVLSKEQMHEIALGLKASGYSF 195
>gb|DR068609.1|DR068609 RTDK1_1_G05.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_1_G05_A029 5', mRNA sequence
Length = 728
Score = 93.0 bits (197), Expect(2) = 4e-028
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = +1 / -2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LPDGF+ + RG V+ W Q VL+HP++GG +H GWNSTLESI G+P+L P+ G+
Sbjct: 520 LPDGFLNETKQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLESISFGLPILGFPLGGE 341
Query: 586 QXPTXXYVCDVWXIXVLL 639
Q ++ D W I + L
Sbjct: 340 QFVNCKFIVDEWKIGMRL 287
Score = 51.8 bits (107), Expect(2) = 4e-028
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1 / -2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C +WLD + P SV+YVSFGS++ V+ ++ EIA GL S F
Sbjct: 700 CTQWLDDKTPKSVIYVSFGSLLPVSISQIEEIAMGLKASDYSF 572
>gb|DR068520.1|DR068520 RTDK1_1_G05.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_1_G05_A029 3', mRNA sequence
Length = 643
Score = 93.0 bits (197), Expect(2) = 4e-028
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LPDGF+ + RG V+ W Q VL+HP++GG +H GWNSTLESI G+P+L P+ G+
Sbjct: 245 LPDGFLNETKQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLESISFGLPILGFPLGGE 66
Query: 586 QXPTXXYVCDVWXIXVLL 639
Q ++ D W I + L
Sbjct: 65 QFVNCKFIVDEWKIGMRL 12
Score = 51.8 bits (107), Expect(2) = 4e-028
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1 / -3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C +WLD + P SV+YVSFGS++ V+ ++ EIA GL S F
Sbjct: 425 CTQWLDDKTPKSVIYVSFGSLLPVSISQIEEIAMGLKASDYSF 297
>gb|CO366516.1|CO366516 RTK1_28_G11.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_28_G11_A029 3', mRNA sequence
Length = 876
Score = 88.4 bits (187), Expect(2) = 8e-028
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP+GF+ +G V++W+ Q +VL+HP+VGG TH GWNS LES++ G PML+ P+ D
Sbjct: 184 LPEGFVEGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTD 363
Query: 586 QXPTXXYVCDVWXIXV 633
Q + + W + +
Sbjct: 364 QCVNRRLIVEEWGVAM 411
Score = 55.5 bits (115), Expect(2) = 8e-028
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD+ SV+Y+SFGS HV+ D++ E+A GL S PF
Sbjct: 7 CTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPF 135
>gb|DR180536.1|DR180536 RTMNUT1_33_F10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_33_F10_A029 3', mRNA sequence
Length = 811
Score = 88.4 bits (187), Expect(2) = 8e-028
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP+GF+ +G V++W+ Q +VL+HP+VGG TH GWNS LES++ G PML+ P+ D
Sbjct: 283 LPEGFVEGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTD 462
Query: 586 QXPTXXYVCDVWXIXV 633
Q + + W + +
Sbjct: 463 QCVNRRLIVEEWGVAM 510
Score = 55.5 bits (115), Expect(2) = 8e-028
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD+ SV+Y+SFGS HV+ D++ E+A GL S PF
Sbjct: 106 CTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPF 234
>gb|CO176349.1|CO176349 NDL1_61_A07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_61_A07_A029 5', mRNA sequence
Length = 795
Score = 88.4 bits (187), Expect(2) = 8e-028
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP+GF+ +G V++W+ Q +VL+HP+VGG TH GWNS LES++ G PML+ P+ D
Sbjct: 466 LPEGFVEGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTD 645
Query: 586 QXPTXXYVCDVWXIXV 633
Q + + W + +
Sbjct: 646 QCVNRRLIVEEWGVAM 693
Score = 55.5 bits (115), Expect(2) = 8e-028
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD+ SV+Y+SFGS HV+ D++ E+A GL S PF
Sbjct: 289 CTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPF 417
>gb|CO159636.1|CO159636 FLD1_14_G06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_G06_A029 5', mRNA sequence
Length = 763
Score = 88.4 bits (187), Expect(2) = 8e-028
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP+GF+ +G V++W+ Q +VL+HP+VGG TH GWNS LES++ G PML+ P+ D
Sbjct: 512 LPEGFVEGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTD 691
Query: 586 QXPTXXYVCDVWXIXV 633
Q + + W + +
Sbjct: 692 QCVNRRLIVEEWGVAM 739
Score = 55.5 bits (115), Expect(2) = 8e-028
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD+ SV+Y+SFGS HV+ D++ E+A GL S PF
Sbjct: 335 CTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPF 463
>gb|BQ699997.1|BQ699997 NXRV132_G06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV132_G06 5' similar to Arabidopsis thaliana
sequence At2g36970 putative glucosyltransferase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 539
Score = 88.4 bits (187), Expect(2) = 8e-028
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP+GF+ +G V++W+ Q +VL+HP+VGG TH GWNS LES++ G PML+ P+ D
Sbjct: 180 LPEGFVEGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTD 359
Query: 586 QXPTXXYVCDVWXIXV 633
Q + + W + +
Sbjct: 360 QCVNRRLIVEEWGVAM 407
Score = 55.5 bits (115), Expect(2) = 8e-028
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD+ SV+Y+SFGS HV+ D++ E+A GL S PF
Sbjct: 3 CTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPF 131
>gb|DR117368.1|DR117368 RTMG1_6_C05.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_C05_A029 5', mRNA sequence
Length = 935
Score = 88.0 bits (186), Expect(2) = 1e-027
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP+GF+ +G V++W+ Q +VL+HP+VGG TH GWNS LES++ G PML+ P+ D
Sbjct: 304 LPEGFVEGTRDQGLVVQWSSQLKVLSHPSVGGFPTHCGWNSILESLWLGKPMLAFPLLTD 483
Query: 586 QXPTXXYVCDVWXIXV 633
Q + + W + +
Sbjct: 484 QCVNRRLIVEEWGVAM 531
Score = 55.5 bits (115), Expect(2) = 1e-027
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD+ SV+Y+SFGS HV+ D++ E+A GL S PF
Sbjct: 127 CTSWLDSMPNSSVIYISFGSYAHVSRDQIQEMAMGLLESKQPF 255
>gb|DR117403.1|DR117403 RTMG1_6_F06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_F06_A029 5', mRNA sequence
Length = 896
Score = 88.9 bits (188), Expect(2) = 1e-027
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LPDGF + R +++WAPQ +VLAH +VG TH GWNSTLESI GVP++ P F D
Sbjct: 615 LPDGFEERTKDRALLVKWAPQVKVLAHTSVGLFVTHCGWNSTLESISMGVPVVGFPYFAD 436
Query: 586 QXPTXXYVCDVWXI 627
Q + ++W +
Sbjct: 435 QFLNCRFAKEIWKV 394
Score = 54.6 bits (113), Expect(2) = 1e-027
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +1 / -3
Query: 217 QDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+D C++WLD + P SV+Y+SFG++ + ++L ++A GL G PF
Sbjct: 801 EDGRCLQWLDMQQPASVIYISFGNLAVKSQEQLEQLALGLEGCGQPF 661
>gb|CF403057.1|CF403057 RTWW1_24_E04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_24_E04_A015 5', mRNA sequence
Length = 672
Score = 93.0 bits (197), Expect(2) = 1e-027
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LPDGF+ + RG V+ W Q VL+HP++GG +H GWNSTLESI G+P+L P+ G+
Sbjct: 360 LPDGFLNETKQRGVVVPWCSQLNVLSHPSIGGFFSHCGWNSTLESISFGLPILGFPLGGE 539
Query: 586 QXPTXXYVCDVWXIXVLL 639
Q ++ D W I + L
Sbjct: 540 QFVNCKFIVDEWKIGMRL 593
Score = 50.0 bits (103), Expect(2) = 1e-027
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C +WLD + P SV+YVSFGS++ V+ + EIA GL S F
Sbjct: 180 CTQWLDDKPPKSVIYVSFGSLLPVSISQTEEIAMGLKASDYSF 308
>gb|BX250474.1|BX250474 BX250474 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP037D07 similar to Flavonol 3 O
glucosyltransferase, mRNA sequence
Length = 656
Score = 88.4 bits (187), Expect(2) = 1e-027
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP+GF+ +G V++W+ Q +VL+HP+VGG TH GWNS LES++ G PML+ P+ D
Sbjct: 193 LPEGFVEGTRDQGLVVQWSSQLKVLSHPSVGGFLTHCGWNSILESLWLGKPMLAFPLLTD 372
Query: 586 QXPTXXYVCDVWXIXV 633
Q + + W + +
Sbjct: 373 QCVNRRLIVEEWGVAM 420
Score = 54.6 bits (113), Expect(2) = 1e-027
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD+ SV+Y+SFGS HV+ D++ E+A GL S PF
Sbjct: 16 CTGWLDSMPNSSVIYISFGSYAHVSRDQIEEMAMGLLESKQPF 144
>gb|DR385544.1|DR385544 RTHG1_9_G06.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_G06_A029 3', mRNA sequence
Length = 823
Score = 86.6 bits (183), Expect(2) = 3e-027
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ W Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 169 LPHGFLDENKSQGLVVPWCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 348
Query: 586 QXPTXXYVCDVWXIXVLLXXV 648
Q + D W I L V
Sbjct: 349 QFTNCKLMADEWKIGFRLSGV 411
Score = 55.5 bits (115), Expect(2) = 3e-027
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1 / +1
Query: 238 WLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
W DA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 1 WRDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 111
>gb|DR023554.1|DR023554 STRS1_58_A10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_A10_A034 5', mRNA sequence
Length = 423
Score = 77.9 bits (164), Expect(2) = 3e-027
Identities = 32/72 (44%), Positives = 43/72 (59%)
Frame = +1 / +3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF+ + +G V+ Q +VL+HP+VGG TH GWNS LESI GVP++ P + D
Sbjct: 207 LPHGFLDENKSQGLVVPLCNQLQVLSHPSVGGFITHCGWNSMLESIAFGVPLVGFPFWND 386
Query: 586 QXPTXXYVCDVW 621
Q + D W
Sbjct: 387 QFTNCKLMADEW 422
Score = 64.2 bits (134), Expect(2) = 3e-027
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
C EWLDA+ GSV+YVSFGS+VH T +L EIA GL +SG
Sbjct: 30 CSEWLDAKPNGSVIYVSFGSMVHATKAQLEEIATGLKDSG 149
>gb|DR015938.1|DR015938 STRS1_6_D07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_D07_A034 5', mRNA sequence
Length = 743
Score = 77.0 bits (162), Expect(2) = 4e-027
Identities = 31/61 (50%), Positives = 39/61 (63%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP GF + R + WAPQ +VLAHP+VG TH GWNS LE++ GVP++ P F D
Sbjct: 541 LPKGFEERTKKRALFVRWAPQVKVLAHPSVGLFLTHCGWNSMLENLGMGVPVVGFPYFAD 720
Query: 586 Q 588
Q
Sbjct: 721 Q 723
Score = 64.6 bits (135), Expect(2) = 4e-027
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +1 / +1
Query: 193 ADETSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
A SL ++ C+ WLD + PGSV+Y+SFGS+ + +L ++A GL NSG PF
Sbjct: 331 ASGCSLWEEEEGCLTWLDMQRPGSVIYISFGSIAVKSKQQLEQLALGLENSGQPF 495
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.317 0.136 0.413
Matrix: BLOSUM62
Number of Hits to DB: 305,874,180
Number of Sequences: 355925
Number of extensions: 3819088
Number of successful extensions: 36407
Number of sequences better than 1.0e-020: 139
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 10257704730
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)