TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBB9c12.pg.2.1
(545 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO366504.1|CO366504 RTK1_28_F09.b1_A029 Roots minus pota... 114 2e-039
gb|DR018577.1|DR018577 STRS1_24_C07.b1_A034 Shoot tip pitch... 109 9e-039
gb|CF389382.1|CF389382 RTDR2_7_B10.b1_A021 Loblolly pine ro... 115 1e-036
gb|DR024108.1|DR024108 STRS1_62_A06.g1_A034 Shoot tip pitch... 111 6e-035
gb|DR024054.1|DR024054 STRS1_62_A06.b1_A034 Shoot tip pitch... 111 6e-035
gb|DR015813.1|DR015813 STRS1_5_F11.g1_A034 Shoot tip pitch ... 111 6e-035
gb|DR015728.1|DR015728 STRS1_5_F11.b1_A034 Shoot tip pitch ... 111 8e-035
gb|DR011191.1|DR011191 HEAT1_4_D07.b1_A029 Root at 37 C for... 107 2e-034
gb|DR388603.1|DR388603 RTHG1_29_G08.b1_A029 Roots plus adde... 114 4e-034
gb|CO159504.1|CO159504 FLD1_14_B06.b1_A029 Root flooded Pin... 111 7e-034
gb|DR090237.1|DR090237 RTAL1_13_D08.g1_A029 Roots plus adde... 111 7e-034
gb|CO164333.1|CO164333 FLD1_47_G07.b1_A029 Root flooded Pin... 109 2e-033
gb|DR094529.1|DR094529 STRR1_15_D08.b1_A033 Stem Response R... 134 6e-031
gb|DR094610.1|DR094610 STRR1_15_D08.g1_A033 Stem Response R... 134 6e-031
gb|CO159443.1|CO159443 FLD1_13_D05.g1_A029 Root flooded Pin... 130 1e-029
gb|DR072788.1|DR072788 RTDK1_28_D01.g1_A029 Roots, dark Pin... 111 1e-029
gb|CO175549.1|CO175549 NDL1_55_B04.g1_A029 Needles control ... 118 1e-028
gb|DR094210.1|DR094210 STRR1_13_D08.b1_A033 Stem Response R... 97 6e-028
gb|CF666532.1|CF666532 RTCNT1_24_B10.b1_A029 Root control P... 124 6e-028
gb|CO169484.1|CO169484 NDL1_7_H09.b1_A029 Needles control P... 89 1e-027
gb|DR101555.1|DR101555 STRR1_74_D08.b1_A033 Stem Response R... 94 4e-027
gb|CF472392.1|CF472392 RTDS1_9_E09.g1_A015 Drought-stressed... 120 8e-027
gb|DR111145.1|DR111145 RTS1_15_D11.g1_A029 Roots minus sulf... 120 8e-027
gb|CF401719.1|CF401719 RTWW1_14_A04.g1_A015 Well-watered lo... 120 1e-026
gb|DR019885.1|DR019885 STRS1_33_D06.b1_A034 Shoot tip pitch... 120 1e-026
gb|CO413944.1|CO413944 EST844329 Sequencing ESTs from loblo... 107 1e-026
gb|DN447754.1|DN447754 EST943553 Sequencing ESTs from loblo... 107 1e-026
gb|DT624388.1|DT624388 EST1158663 Sequencing ESTs from lobl... 107 1e-026
gb|CO410810.1|CO410810 EST841195 Sequencing ESTs from loblo... 107 1e-026
gb|CO410963.1|CO410963 EST841348 Sequencing ESTs from loblo... 107 1e-026
gb|CO368412.1|CO368412 RTK1_40_B05.g1_A029 Roots minus pota... 107 1e-026
gb|CO413888.1|CO413888 EST844273 Sequencing ESTs from loblo... 107 1e-026
gb|DT625922.1|DT625922 EST1157846 Sequencing ESTs from lobl... 107 1e-026
gb|DR177492.1|DR177492 RTMNUT1_5_D07.g1_A029 Roots minus mi... 106 1e-025
gb|CF394916.1|CF394916 RTDS2_8_F04.g1_A021 Drought-stressed... 105 2e-025
gb|CF394807.1|CF394807 RTDS2_7_F05.g1_A021 Drought-stressed... 105 2e-025
gb|CV031446.1|CV031446 RTNACL1_1_D07.g1_A029 Roots plus add... 97 2e-025
gb|CF393594.1|CF393594 RTDR3_15_B07.b1_A022 Loblolly pine r... 114 5e-025
gb|DR091543.1|DR091543 RTAL1_22_H02.b1_A029 Roots plus adde... 114 5e-025
gb|DR054231.1|DR054231 RTCA1_16_B10.b1_A029 Roots minus cal... 98 5e-025
gb|DR015862.1|DR015862 STRS1_6_D07.b1_A034 Shoot tip pitch ... 90 5e-025
gb|DR057749.1|DR057749 RTNIT1_7_C12.g1_A029 Roots minus nit... 114 6e-025
gb|DR694987.1|DR694987 EST1085080 Normalized pine embryo li... 113 9e-025
gb|DR112323.1|DR112323 RTS1_27_H07.b1_A029 Roots minus sulf... 95 9e-025
gb|BX681374.1|BX681374 BX681374 RS Pinus pinaster cDNA clon... 113 1e-024
gb|CO367803.1|CO367803 RTK1_36_E12.g1_A029 Roots minus pota... 112 2e-024
gb|DR057313.1|DR057313 RTNIT1_5_C03.b1_A029 Roots minus nit... 112 2e-024
gb|DR057656.1|DR057656 RTNIT1_7_C03.b1_A029 Roots minus nit... 112 2e-024
gb|DR160776.1|DR160776 RTFE1_8_B03.b1_A029 Roots minus iron... 112 2e-024
gb|DR160864.1|DR160864 RTFE1_8_B03.g1_A029 Roots minus iron... 112 2e-024
gb|DR386533.1|DR386533 RTHG1_15_G09.g1_A029 Roots plus adde... 112 2e-024
gb|DR019261.1|DR019261 STRS1_28_F11.g1_A034 Shoot tip pitch... 83 2e-024
gb|DR049066.1|DR049066 RTBOR1_13_C03.b1_A029 Roots plus add... 83 2e-024
gb|CO172600.1|CO172600 NDL1_30_E11.g1_A029 Needles control ... 83 2e-024
gb|CX645779.1|CX645779 COLD1_5_F07.b1_A029 Root cold Pinus ... 83 2e-024
gb|CF667004.1|CF667004 RTCNT1_27_C11.g1_A029 Root control P... 83 2e-024
gb|DR019177.1|DR019177 STRS1_28_F11.b2_A034 Shoot tip pitch... 83 2e-024
gb|CF385981.1|CF385981 RTDR1_7_E07.g1_A015 Loblolly pine ro... 83 2e-024
gb|DR051169.1|DR051169 RTBOR1_28_D06.b1_A029 Roots plus add... 83 2e-024
gb|DR095142.1|DR095142 STRR1_19_C05.b1_A033 Stem Response R... 84 2e-024
gb|DR110554.1|DR110554 RTS1_11_C05.g1_A029 Roots minus sulf... 86 2e-024
gb|DR385195.1|DR385195 RTHG1_7_E09.b1_A029 Roots plus added... 86 2e-024
gb|CO176695.1|CO176695 NDL1_63_D04.g1_A029 Needles control ... 108 2e-024
gb|CF390898.1|CF390898 RTDR3_2_B12.g1_A022 Loblolly pine ro... 105 3e-024
gb|CF472330.1|CF472330 RTDS1_9_E09.b1_A015 Drought-stressed... 111 4e-024
gb|DR060785.1|DR060785 RTNIT1_30_B03.b1_A029 Roots minus ni... 73 4e-024
gb|CO161650.1|CO161650 FLD1_30_F08.b1_A029 Root flooded Pin... 111 6e-024
gb|CO161727.1|CO161727 FLD1_30_F08.g1_A029 Root flooded Pin... 111 6e-024
dbj|BD224494.1| Materials and methods for the modification ... 102 6e-024
gb|CO162822.1|CO162822 FLD1_37_F01.g1_A029 Root flooded Pin... 110 1e-023
gb|CX649821.1|CX649821 COLD1_41_E05.g1_A029 Root cold Pinus... 83 1e-023
gb|CO364666.1|CO364666 RTK1_21_C04.b1_A029 Roots minus pota... 95 1e-023
gb|CO364746.1|CO364746 RTK1_21_C04.g1_A029 Roots minus pota... 95 1e-023
gb|CF666932.1|CF666932 RTCNT1_27_C11.b1_A029 Root control P... 79 2e-023
gb|BX255284.1|BX255284 BX255284 Pinus pinaster differenciat... 102 3e-023
gb|CF385957.1|CF385957 RTDR1_7_E07.b1_A015 Loblolly pine ro... 79 3e-023
gb|DR101545.1|DR101545 STRR1_74_C05.b1_A033 Stem Response R... 108 4e-023
gb|DR386143.1|DR386143 RTHG1_13_E11.b1_A029 Roots plus adde... 107 5e-023
gb|DR682869.1|DR682869 EST1072944 Normalized pine embryo li... 107 5e-023
gb|BX248899.1|BX248899 BX248899 Pinus pinaster differenciat... 98 5e-023
gb|BQ698426.1|BQ698426 NXPV_069_G04_F NXPV (Nsf Xylem Plani... 79 5e-023
gb|DR023955.1|DR023955 STRS1_61_E05.b1_A034 Shoot tip pitch... 107 7e-023
gb|BX250474.1|BX250474 BX250474 Pinus pinaster differenciat... 82 1e-022
gb|DR164166.1|DR164166 RTFE1_47_F01.b1_A029 Roots minus iro... 92 1e-022
gb|CF473082.1|CF473082 RTDS1_1_H08.g1_A015 Drought-stressed... 106 1e-022
gb|DR117403.1|DR117403 RTMG1_6_F06.g1_A029 Roots minus magn... 96 1e-022
gb|BX255181.1|BX255181 BX255181 Pinus pinaster differenciat... 101 1e-022
gb|BX255444.1|BX255444 BX255444 Pinus pinaster differenciat... 81 2e-022
gb|CF390867.1|CF390867 RTDR3_2_B12.b1_A022 Loblolly pine ro... 105 2e-022
gb|CO366516.1|CO366516 RTK1_28_G11.b1_A029 Roots minus pota... 82 2e-022
gb|DR180536.1|DR180536 RTMNUT1_33_F10.b1_A029 Roots minus m... 82 2e-022
gb|DR744088.1|DR744088 RTCU1_20_D07.b1_A029 Roots plus adde... 82 2e-022
gb|DR179487.1|DR179487 RTMNUT1_22_H11.b2_A029 Roots minus m... 80 2e-022
gb|DR112917.1|DR112917 RTS1_31_C10.g1_A029 Roots minus sulf... 98 3e-022
gb|DR057552.1|DR057552 RTNIT1_6_A10.g1_A029 Roots minus nit... 105 3e-022
gb|DR116517.1|DR116517 RTMG1_1_A03.b1_A029 Roots minus magn... 105 4e-022
gb|CF397459.1|CF397459 RTDS3_3_C06.g1_A022 Drought-stressed... 104 7e-022
gb|CF470473.1|CF470473 RTDS1_17_C10.g1_A015 Drought-stresse... 104 7e-022
gb|CF470501.1|CF470501 RTDS1_17_D08.g1_A015 Drought-stresse... 104 7e-022
gb|CF470929.1|CF470929 RTDS1_15_D01.g1_A015 Drought-stresse... 104 7e-022
gb|CO364236.1|CO364236 RTK1_14_B09.g1_A029 Roots minus pota... 104 7e-022
gb|DR117368.1|DR117368 RTMG1_6_C05.g1_A029 Roots minus magn... 80 8e-022
gb|DR051999.1|DR051999 RTCA1_1_F08.g1_A029 Roots minus calc... 77 8e-022
gb|CF401158.1|CF401158 RTWW1_10_D01.g1_A015 Well-watered lo... 77 9e-022
gb|DR060675.1|DR060675 RTNIT1_29_G03.b1_A029 Roots minus ni... 98 9e-022
gb|DR744031.1|DR744031 RTCU1_19_G01.g1_A029 Roots plus adde... 98 9e-022
gb|CX712559.1|CX712559 RTPQ1_3_F09.b2_A032 Roots treated wi... 71 9e-022
gb|DR743959.1|DR743959 RTCU1_19_G01.b1_A029 Roots plus adde... 98 9e-022
gb|BE644117.1|BE644117 NXCI_054_F12_F NXCI (Nsf Xylem Compr... 103 9e-022
gb|DR095898.1|DR095898 STRR1_24_H10.b1_A033 Stem Response R... 103 9e-022
gb|CX646003.1|CX646003 COLD1_6_D11.g1_A029 Root cold Pinus ... 74 1e-021
gb|BX253864.1|BX253864 BX253864 Pinus pinaster differenciat... 99 1e-021
gb|DR117287.1|DR117287 RTMG1_6_C05.b1_A029 Roots minus magn... 79 2e-021
gb|CF392294.1|CF392294 RTDR3_7_D10.b1_A022 Loblolly pine ro... 96 2e-021
gb|BE187204.1|BE187204 NXNV_160_E12_F Nsf Xylem Normal wood... 102 2e-021
gb|CF474107.1|CF474107 RTWW2_18_C05.g1_A021 Well-watered lo... 79 2e-021
gb|CO363008.1|CO363008 RTK1_7_C07.b1_A029 Roots minus potas... 73 2e-021
gb|CF395665.1|CF395665 RTDS2_16_C04.g1_A021 Drought-stresse... 102 2e-021
gb|CO159361.1|CO159361 FLD1_13_D05.b1_A029 Root flooded Pin... 98 3e-021
gb|BX249954.1|BX249954 BX249954 Pinus pinaster differenciat... 70 3e-021
gb|CF476517.1|CF476517 RTWW3_1_H01.g1_A022 Well-watered lob... 101 3e-021
gb|CX651271.1|CX651271 COLD1_51_F11.b1_A029 Root cold Pinus... 101 3e-021
gb|DR101682.1|DR101682 STRR1_75_C03.b1_A033 Stem Response R... 101 5e-021
gb|BQ699997.1|BQ699997 NXRV132_G06_F NXRV (Nsf Xylem Root w... 82 5e-021
gb|DR068907.1|DR068907 RTDK1_3_C12.g1_A029 Roots, dark Pinu... 89 6e-021
gb|CO158429.1|CO158429 FLD1_6_G10.g1_A029 Root flooded Pinu... 100 6e-021
gb|CO159223.1|CO159223 FLD1_12_F05.b1_A029 Root flooded Pin... 100 6e-021
gb|CO160872.1|CO160872 FLD1_25_E02.b1_A029 Root flooded Pin... 100 6e-021
gb|CO161871.1|CO161871 FLD1_31_E09.g1_A029 Root flooded Pin... 100 6e-021
gb|CO164784.1|CO164784 FLD1_50_G01.b1_A029 Root flooded Pin... 100 6e-021
gb|CO165060.1|CO165060 FLD1_52_C08.b1_A029 Root flooded Pin... 100 6e-021
gb|CO165133.1|CO165133 FLD1_52_C08.g1_A029 Root flooded Pin... 100 6e-021
gb|CO369423.1|CO369423 RTK1_47_B12.b1_A029 Roots minus pota... 100 6e-021
gb|DR017118.1|DR017118 STRS1_14_E02.b1_A034 Shoot tip pitch... 100 6e-021
gb|DR020338.1|DR020338 STRS1_36_F03.b1_A034 Shoot tip pitch... 100 6e-021
gb|DR023083.1|DR023083 STRS1_55_H08.b1_A034 Shoot tip pitch... 100 6e-021
gb|DR023822.1|DR023822 STRS1_60_F11.b1_A034 Shoot tip pitch... 100 6e-021
gb|DR024523.1|DR024523 STRS1_65_C06.g1_A034 Shoot tip pitch... 100 6e-021
gb|DR093166.1|DR093166 STRR1_6_B04.g1_A033 Stem Response Re... 100 6e-021
gb|DR099649.1|DR099649 STRR1_57_D02.b1_A033 Stem Response R... 100 6e-021
gb|DR101174.1|DR101174 STRR1_71_C05.b1_A033 Stem Response R... 100 6e-021
gb|DR101216.1|DR101216 STRR1_71_G05.b1_A033 Stem Response R... 100 6e-021
gb|DR101844.1|DR101844 STRR1_76_F02.b1_A033 Stem Response R... 100 6e-021
gb|DR385544.1|DR385544 RTHG1_9_G06.b1_A029 Roots plus added... 100 6e-021
gb|DR385625.1|DR385625 RTHG1_9_G06.g1_A029 Roots plus added... 100 6e-021
gb|DR021640.1|DR021640 STRS1_46_B08.b1_A034 Shoot tip pitch... 100 9e-021
>gb|CO366504.1|CO366504 RTK1_28_F09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_28_F09_A029 3', mRNA sequence
Length = 842
Score = 114 bits (243), Expect(3) = 2e-039
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = +2 / +1
Query: 62 NEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAI 241
N E L + +GL+V WCPQL+VL+H + G F THCGWNSTLE++ GVP+ A+
Sbjct: 82 NSEENLPEGFLAEISGQGLVVPWCPQLQVLSHASVGAFMTHCGWNSTLESLTMGVPLLAV 261
Query: 242 PHWADQPTISKYMESMWGLGVRVRK 316
P W DQ T S+Y+ W G+R+ K
Sbjct: 262 PQWTDQTTNSRYIGEEWKTGLRLDK 336
Score = 58.3 bits (121), Expect(3) = 2e-039
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +2 / +1
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ GLV ++ VE+CI+ VM+G+ + R++A W + ++AAM GGSS NI EF
Sbjct: 334 KRSADGLVGKEAVEKCIRMVMEGELGAELRENALRWKKLSRAAMGEGGSSHGNIEEF 504
Score = 28.1 bits (55), Expect(3) = 2e-039
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSNEEHKLSN 85
E+ GL SG FIWVVR + + + N
Sbjct: 4 EIALGLKASGYSFIWVVRPSSSNGVIN 84
>gb|DR018577.1|DR018577 STRS1_24_C07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_24_C07_A034 3', mRNA sequence
Length = 823
Score = 109 bits (233), Expect(3) = 9e-039
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +2 / +1
Query: 62 NEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAI 241
N E L ++ +GL+V WC QL+VL+H + G F THCGWNSTLE++ GVPM I
Sbjct: 235 NSEENLPAGFLNETSGQGLVVPWCHQLQVLSHASVGAFMTHCGWNSTLESLSLGVPMLVI 414
Query: 242 PHWADQPTISKYMESMWGLGVRVRK 316
P W+DQ T S Y+ W +G+R+++
Sbjct: 415 PQWSDQSTNSAYVAEKWMVGMRLKE 489
Score = 63.4 bits (132), Expect(3) = 9e-039
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +2 / +1
Query: 314 KDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
+ E GLV R+EVE+CIK VM+ + R++A W + A+ AM GGSS +NI EF
Sbjct: 490 RSENGLVGREEVEKCIKIVMESQLGAELRENALRWKKLAREAMVKGGSSDRNIQEF 657
Score = 25.4 bits (49), Expect(3) = 9e-039
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVR 58
E+ GL SG F+WVVR
Sbjct: 157 EIALGLKASGYSFLWVVR 210
>gb|CF389382.1|CF389382 RTDR2_7_B10.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_7_B10_A021 3', mRNA
sequence
Length = 561
Score = 115 bits (245), Expect(2) = 1e-036
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = +2 / +2
Query: 62 NEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAI 241
+ + L ++ ++GLIV WCPQLEVL+H + G F THCGWNSTLE + +GVPM A+
Sbjct: 32 HNDENLPEGFLEETSDQGLIVPWCPQLEVLSHVSVGAFMTHCGWNSTLEGLSSGVPMLAV 211
Query: 242 PHWADQPTISKYMESMWGLGVRVRK 316
P W+DQ + Y+E W G+R+ K
Sbjct: 212 PQWSDQMLNALYIEEKWKTGLRLSK 286
Score = 58.3 bits (121), Expect(2) = 1e-036
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +2 / +2
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ GLV + EVE+CI+ VM+ + + +K+A W A+ AM GGSS KNI EF
Sbjct: 284 KRSADGLVEKAEVEKCIRMVMETERGVEMKKNALRWKTLAREAMTEGGSSDKNIEEF 454
>gb|DR024108.1|DR024108 STRS1_62_A06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_A06_A034 5', mRNA sequence
Length = 820
Score = 111 bits (238), Expect(2) = 6e-035
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +2 / +3
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
++ E+GL+V WCPQLEVL+H++ G F TH GWNSTLE + GVPM A+P W+DQ T S
Sbjct: 204 NETSEQGLVVPWCPQLEVLSHESVGAFMTHSGWNSTLEGLSLGVPMVAVPQWSDQTTNSL 383
Query: 275 YMESMWGLGVRVRK 316
Y+ W G+R+ K
Sbjct: 384 YIAEKWKTGLRLTK 425
Score = 55.6 bits (115), Expect(2) = 6e-035
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +2 / +3
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ GLV ++EVE+ I+ VM+ + + RK+A W A+ AM GGSS KNI +F
Sbjct: 423 KRSADGLVGKEEVEKGIRTVMETERGIEMRKNALRWKTLAREAMMEGGSSDKNIEDF 593
>gb|DR024054.1|DR024054 STRS1_62_A06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_A06_A034 3', mRNA sequence
Length = 815
Score = 111 bits (238), Expect(2) = 6e-035
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +2 / +3
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
++ E+GL+V WCPQLEVL+H++ G F TH GWNSTLE + GVPM A+P W+DQ T S
Sbjct: 3 NETSEQGLVVPWCPQLEVLSHESVGAFMTHSGWNSTLEGLSLGVPMVAVPQWSDQTTNSL 182
Query: 275 YMESMWGLGVRVRK 316
Y+ W G+R+ K
Sbjct: 183 YIAEKWKTGLRLTK 224
Score = 55.6 bits (115), Expect(2) = 6e-035
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +2 / +3
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ GLV ++EVE+ I+ VM+ + + RK+A W A+ AM GGSS KNI +F
Sbjct: 222 KRSADGLVGKEEVEKGIRTVMETERGIEMRKNALRWKTLAREAMMEGGSSDKNIEDF 392
>gb|DR015813.1|DR015813 STRS1_5_F11.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_F11_A034 5', mRNA sequence
Length = 790
Score = 111 bits (238), Expect(2) = 6e-035
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +2 / +3
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
++ E+GL+V WCPQLEVL+H++ G F TH GWNSTLE + GVPM A+P W+DQ T S
Sbjct: 240 NETSEQGLVVPWCPQLEVLSHESVGAFMTHSGWNSTLEGLSLGVPMVAVPQWSDQTTNSL 419
Query: 275 YMESMWGLGVRVRK 316
Y+ W G+R+ K
Sbjct: 420 YIAEKWKTGLRLTK 461
Score = 55.6 bits (115), Expect(2) = 6e-035
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +2 / +3
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ GLV ++EVE+ I+ VM+ + + RK+A W A+ AM GGSS KNI +F
Sbjct: 459 KRSADGLVGKEEVEKGIRTVMETERGIEMRKNALRWKTLAREAMMEGGSSDKNIEDF 629
>gb|DR015728.1|DR015728 STRS1_5_F11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_F11_A034 3', mRNA sequence
Length = 805
Score = 111 bits (237), Expect(2) = 8e-035
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = +2 / +3
Query: 107 ERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMES 286
E+GL+V WCPQLEVL+H++ G F TH GWNSTLE + GVPM A+P W+DQ T S Y+
Sbjct: 12 EQGLVVPWCPQLEVLSHESVGAFMTHSGWNSTLEGLSLGVPMVAVPQWSDQTTNSLYIAE 191
Query: 287 MWGLGVRVRK 316
W G+R+ K
Sbjct: 192 KWKTGLRLTK 221
Score = 55.6 bits (115), Expect(2) = 8e-035
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +2 / +3
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ GLV ++EVE+ I+ VM+ + + RK+A W A+ AM GGSS KNI +F
Sbjct: 219 KRSADGLVGKEEVEKGIRTVMETERGIEMRKNALRWKTLAREAMMEGGSSDKNIEDF 389
>gb|DR011191.1|DR011191 HEAT1_4_D07.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_4_D07_A029 3', mRNA sequence
Length = 763
Score = 107 bits (229), Expect(2) = 2e-034
Identities = 40/85 (47%), Positives = 52/85 (61%)
Frame = +2 / +3
Query: 62 NEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAI 241
N E L + E+GL+V WC QLEVL+H + F THCGWNSTLE++ GVP+ A+
Sbjct: 66 NSEECLPENFLYETSEQGLVVPWCSQLEVLSHASAAAFMTHCGWNSTLESLTLGVPILAV 245
Query: 242 PHWADQPTISKYMESMWGLGVRVRK 316
P W DQ T KY+ W +R+ K
Sbjct: 246 PQWTDQTTNFKYIAEKWKTDLRLHK 320
Score = 57.9 bits (120), Expect(2) = 2e-034
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2 / +3
Query: 326 GLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
GLV ++EVE+CIK +M+ + + R++A W ++ AM GGSS KNI EF
Sbjct: 333 GLVGKEEVEKCIKMIMETEVGVELRENALRWKTLSREAMMEGGSSDKNIEEF 488
>gb|DR388603.1|DR388603 RTHG1_29_G08.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_29_G08_A029 3', mRNA sequence
Length = 712
Score = 114 bits (244), Expect(2) = 4e-034
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +2 / -3
Query: 62 NEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAI 241
N E L + +GL+V WCPQL+VL+H + G F THCGWNSTLE++ GVP+ A+
Sbjct: 416 NSEENLPEGFLAEISGQGLVVPWCPQLQVLSHASVGAFMTHCGWNSTLESLTMGVPLLAV 237
Query: 242 PHWADQPTISKYMESMWGLGVRVRK 316
P W+DQ T S+Y+ W G+R+ K
Sbjct: 236 PQWSDQTTNSRYIGEEWKTGLRLDK 162
Score = 50.1 bits (103), Expect(2) = 4e-034
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2 / -3
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
++ GLV ++ VE+CI+ VM+G+ R++A W + ++ AM GGSS NI
Sbjct: 164 KRSADGLVGKEAVEKCIRMVMEGELGAVLRENALRWKKLSREAMGEGGSSNGNI 3
>gb|CO159504.1|CO159504 FLD1_14_B06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_B06_A029 3', mRNA sequence
Length = 752
Score = 111 bits (236), Expect(2) = 7e-034
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = +2 / +1
Query: 62 NEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAI 241
N E L + +GL+V WCPQL+VL+H + G F THCGWNSTLE++ GVP+ +
Sbjct: 34 NIEKNLPKGFLTEISGQGLVVPWCPQLQVLSHASVGAFMTHCGWNSTLESLTLGVPLLVV 213
Query: 242 PHWADQPTISKYMESMWGLGVRVRK 316
P W+DQ T S+Y+ W G+R+ K
Sbjct: 214 PQWSDQTTNSRYIGEEWKTGLRLDK 288
Score = 52.8 bits (109), Expect(2) = 7e-034
Identities = 21/57 (36%), Positives = 37/57 (64%)
Frame = +2 / +1
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ GLV ++ V++CI+ VM+G+ + R++A W + ++ AM GG+S NI EF
Sbjct: 286 KRSADGLVGKEAVKKCIRMVMEGELGAELRENALRWKKLSREAMGEGGTSNGNIEEF 456
>gb|DR090237.1|DR090237 RTAL1_13_D08.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_13_D08_A029 5', mRNA sequence
Length = 703
Score = 111 bits (236), Expect(2) = 7e-034
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = +2 / -2
Query: 62 NEEHKLSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAI 241
N E L + +GL+V WCPQL+VL+H + G F THCGWNSTLE++ GVP+ +
Sbjct: 693 NIEKNLPKGFLTEISGQGLVVPWCPQLQVLSHASVGAFMTHCGWNSTLESLTLGVPLLVV 514
Query: 242 PHWADQPTISKYMESMWGLGVRVRK 316
P W+DQ T S+Y+ W G+R+ K
Sbjct: 513 PQWSDQTTNSRYIGEEWKTGLRLDK 439
Score = 52.8 bits (109), Expect(2) = 7e-034
Identities = 21/57 (36%), Positives = 37/57 (64%)
Frame = +2 / -2
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ GLV ++ V++CI+ VM+G+ + R++A W + ++ AM GG+S NI EF
Sbjct: 441 KRSADGLVGKEAVKKCIRMVMEGELGAELRENALRWKKLSREAMGEGGTSNGNIEEF 271
>gb|CO164333.1|CO164333 FLD1_47_G07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_G07_A029 3', mRNA sequence
Length = 833
Score = 109 bits (233), Expect(2) = 2e-033
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = +2 / +1
Query: 110 RGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESM 289
+GL+V WCPQL+VL+H + G F THCGWNSTLE++ GVP+ +P W+DQ T S+Y+
Sbjct: 115 QGLVVPWCPQLQVLSHASVGAFMTHCGWNSTLESLTLGVPLLVVPQWSDQTTNSRYIGEE 294
Query: 290 WGLGVRVRK 316
W G+R+ K
Sbjct: 295 WKTGLRLDK 321
Score = 52.8 bits (109), Expect(2) = 2e-033
Identities = 21/57 (36%), Positives = 37/57 (64%)
Frame = +2 / +1
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ GLV ++ V++CI+ VM+G+ + R++A W + ++ AM GG+S NI EF
Sbjct: 319 KRSADGLVGKEAVKKCIRMVMEGELGAELRENALRWKKLSREAMGEGGTSNGNIEEF 489
>gb|DR094529.1|DR094529 STRR1_15_D08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_15_D08_A033 3', mRNA sequence
Length = 828
Score = 134 bits (287), Expect = 6e-031
Identities = 50/98 (51%), Positives = 69/98 (70%)
Frame = +2 / +2
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
+K + RGL+VSWC QL+VL+H + F +HCGWNSTLEA+ GVP+ + W DQ T SK
Sbjct: 224 EKTQARGLVVSWCVQLDVLSHPSVAAFMSHCGWNSTLEALSLGVPVLTLGVWTDQTTNSK 403
Query: 275 YMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSK 388
++ +W GVR+RK E G V RDE++RC++ +D SK
Sbjct: 404 FLADVWKAGVRMRKGEDGTVGRDEIDRCMRMTVDKTSK 517
>gb|DR094610.1|DR094610 STRR1_15_D08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_15_D08_A033 5', mRNA sequence
Length = 825
Score = 134 bits (287), Expect = 6e-031
Identities = 50/98 (51%), Positives = 69/98 (70%)
Frame = +2 / +1
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
+K + RGL+VSWC QL+VL+H + F +HCGWNSTLEA+ GVP+ + W DQ T SK
Sbjct: 316 EKTQARGLVVSWCVQLDVLSHPSVAAFMSHCGWNSTLEALSLGVPVLTLGVWTDQTTNSK 495
Query: 275 YMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSK 388
++ +W GVR+RK E G V RDE++RC++ +D SK
Sbjct: 496 FLADVWKAGVRMRKGEDGTVGRDEIDRCMRMTVDKTSK 609
>gb|CO159443.1|CO159443 FLD1_13_D05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_13_D05_A029 5', mRNA sequence
Length = 799
Score = 130 bits (278), Expect = 1e-029
Identities = 47/98 (47%), Positives = 70/98 (71%)
Frame = +2 / -3
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
++ K+RG++V+WC QLEVL+H + F +HCGWNSTLEA+ GVP+ + W DQ T SK
Sbjct: 542 EETKKRGMVVNWCVQLEVLSHPSVAAFMSHCGWNSTLEALSLGVPVLTLGVWTDQTTNSK 363
Query: 275 YMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSK 388
++ +W GVR++K E G V R+E+ERC++ +D S+
Sbjct: 362 FLSDVWRTGVRMKKREDGTVGREEIERCMRMAVDQRSE 249
>gb|DR072788.1|DR072788 RTDK1_28_D01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_28_D01_A029 5', mRNA sequence
Length = 666
Score = 111 bits (238), Expect(2) = 1e-029
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = +2 / +2
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
++ E+GL+V WCPQLEVL+H++ G F TH GWNSTLE + GVPM A+P W+DQ T S
Sbjct: 314 NETSEQGLVVPWCPQLEVLSHESVGAFMTHSGWNSTLEGLSLGVPMVAVPQWSDQTTNSL 493
Query: 275 YMESMWGLGVRVRK 316
Y+ W G+R+ K
Sbjct: 494 YIAEKWKTGLRLTK 535
Score = 37.7 bits (76), Expect(2) = 1e-029
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2 / +2
Query: 311 RKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAM 442
++ GLV ++EVE+ I+ VM+ + + RK+A W A+ AM
Sbjct: 533 KRSADGLVGKEEVEKGIRTVMETERGIEMRKNALQWKTLAREAM 664
>gb|CO175549.1|CO175549 NDL1_55_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_55_B04_A029 5', mRNA sequence
Length = 790
Score = 118 bits (253), Expect(2) = 1e-028
Identities = 49/124 (39%), Positives = 78/124 (62%)
Frame = +2 / +3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ +LAH +TG F +HCGWNS LE+I GVP A P ADQ + ++ +
Sbjct: 273 VVTSWAPQVSILAHPSTGGFVSHCGWNSVLESIWFGVPFIAWPLQADQRPVGYFLVNDSR 452
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNIT 475
+ V ++K + G+VT++EVE+ +++MDG++ K + AKAA+ GGSS++ +
Sbjct: 453 IAVGLQKRKDGIVTKEEVEKAARELMDGENGKKLTVRTKELKECAKAALAEGGSSSQALA 632
Query: 476 EFAA 487
E A
Sbjct: 633 EVVA 644
Score = 27.6 bits (54), Expect(2) = 1e-028
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 2 GELGNGLYNSGKPFIWVVRSN 64
GEL GL +SG F+W +R +
Sbjct: 141 GELALGLESSGHRFLWALRGH 203
>gb|DR094210.1|DR094210 STRR1_13_D08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_13_D08_A033 3', mRNA sequence
Length = 775
Score = 96.8 bits (205), Expect(3) = 6e-028
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +2 / +1
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L ++ K+R L V W PQL+VLAH A G F THCGWNSTLE+I GVP+ +P++ D
Sbjct: 220 LPEGFEERTKDRALFVQWAPQLKVLAHAAVGLFITHCGWNSTLESISLGVPVVGLPYFGD 399
Query: 257 QPTISKYMESMWGLGV 304
Q ++ + +W +G+
Sbjct: 400 QFLHCRFAKDVWKIGL 447
Score = 34.5 bits (69), Expect(3) = 6e-028
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2 / +1
Query: 317 DEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ LVT++EVE +K +M K R+ A + A+ GGSS N+ F
Sbjct: 469 NDNKLVTKEEVEDVVKTMMTTGIGQKLREKALNLKECGARAVLPGGSSFLNLNTF 633
Score = 30.4 bits (60), Expect(3) = 6e-028
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSN 64
+L GL +G+PF+WV+RS+
Sbjct: 136 QLAIGLEGTGQPFLWVLRSD 195
>gb|CF666532.1|CF666532 RTCNT1_24_B10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_24_B10_A029 3', mRNA sequence
Length = 659
Score = 124 bits (265), Expect = 6e-028
Identities = 49/115 (42%), Positives = 75/115 (65%)
Frame = +2 / +2
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +TG F HCGWNSTLE+I +GVPM A P +A+Q T + + +
Sbjct: 98 VVPSWAPQIPVLSHTSTGSFLRHCGWNSTLESISHGVPMIAWPLFAEQSTNRFLLVNEFK 277
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
+ + + + G V R+EVER +++MDG+ + R A + +KAK A++ GGSS
Sbjct: 278 IAIEAKMESDGFVRREEVERAARELMDGEGGKRLRARAQEFKEKAKTALEAGGSS 442
>gb|CO169484.1|CO169484 NDL1_7_H09.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_H09_A029 3', mRNA sequence
Length = 705
Score = 89.0 bits (188), Expect(3) = 1e-027
Identities = 31/67 (46%), Positives = 48/67 (71%)
Frame = +2 / +2
Query: 104 KERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYME 283
K++GL+V+W PQL+VL+H + G F TH GWNST+E+I GVPM P+W++Q ++
Sbjct: 101 KDQGLLVTWAPQLKVLSHPSVGGFLTHNGWNSTIESISMGVPMIGWPYWSEQFLNCRFSR 280
Query: 284 SMWGLGV 304
+W +G+
Sbjct: 281 DIWKVGM 301
Score = 46.4 bits (95), Expect(3) = 1e-027
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2 / +2
Query: 293 GLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
G+ + + DE GL+ E+E+ ++ +M G + RK+A + A A+ GGSS NI
Sbjct: 296 GMDLEGKADENGLIRSVEIEKVVRRLMQGYEGRELRKNAAKLKEAAIKAVMPGGSSQSNI 475
Query: 473 TEF 481
F
Sbjct: 476 DTF 484
Score = 25.4 bits (49), Expect(3) = 1e-027
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 17 GLYNSGKPFIWVVR 58
GL S +PF+WV+R
Sbjct: 2 GLAGSEQPFLWVIR 43
>gb|DR101555.1|DR101555 STRR1_74_D08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_D08_A033 3', mRNA sequence
Length = 710
Score = 94.1 bits (199), Expect(3) = 4e-027
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +2 / +3
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L ++ K+R L V W PQL+VLAH A G F THCGWNS LE+I GVP+ +P++ D
Sbjct: 87 LPEGFEERTKDRALFVQWAPQLKVLAHAAVGLFITHCGWNSPLESISLGVPVVGLPYFGD 266
Query: 257 QPTISKYMESMWGLGV 304
Q ++ + +W +G+
Sbjct: 267 QFLHCRFAKDVWKIGL 314
Score = 34.5 bits (69), Expect(3) = 4e-027
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2 / +3
Query: 317 DEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
++ LVT++EVE +K +M K R+ A + A+ GGSS N+ F
Sbjct: 336 NDNKLVTKEEVEDVVKTMMTTGIGQKLREKALNLKECGARAVLPGGSSFLNLNTF 500
Score = 30.4 bits (60), Expect(3) = 4e-027
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSN 64
+L GL +G+PF+WV+RS+
Sbjct: 3 QLAIGLEGTGQPFLWVLRSD 62
>gb|CF472392.1|CF472392 RTDS1_9_E09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_9_E09_A015 5', mRNA sequence
Length = 819
Score = 120 bits (257), Expect = 8e-027
Identities = 51/124 (41%), Positives = 78/124 (62%)
Frame = +2 / -2
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +TG F +HCGWNST+E+I++GVPM A P +A+Q + +
Sbjct: 650 VVDSWAPQIGVLSHPSTGGFLSHCGWNSTIESILHGVPMIAWPLFAEQRMNAFLLVKEMK 471
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNIT 475
+G+ +K GLV R+EVER ++VM+GD + +K M KA+ A+ GGSS +
Sbjct: 470 VGIEAQKGADGLVKREEVERAAREVMEGDGGMEMKKRMEELMGKARDAVAEGGSSYNALA 291
Query: 476 EFAA 487
A+
Sbjct: 290 AVAS 279
>gb|DR111145.1|DR111145 RTS1_15_D11.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_15_D11_A029 5', mRNA sequence
Length = 829
Score = 120 bits (257), Expect = 8e-027
Identities = 51/124 (41%), Positives = 78/124 (62%)
Frame = +2 / -2
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +TG F +HCGWNST+E+I++GVPM A P +A+Q + +
Sbjct: 597 VVDSWAPQIGVLSHPSTGGFLSHCGWNSTIESILHGVPMIAWPLFAEQRMNAFLLVKEMK 418
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNIT 475
+G+ +K GLV R+EVER ++VM+GD + +K M KA+ A+ GGSS +
Sbjct: 417 VGIEAQKGADGLVKREEVERAAREVMEGDGGMEMKKRMEELMGKARDAVAEGGSSYNALA 238
Query: 476 EFAA 487
A+
Sbjct: 237 AVAS 226
>gb|CF401719.1|CF401719 RTWW1_14_A04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_14_A04_A015 5', mRNA sequence
Length = 750
Score = 120 bits (256), Expect = 1e-026
Identities = 48/115 (41%), Positives = 74/115 (64%)
Frame = +2 / +1
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +TG F HCGWNSTLE+I +GVPM A P +A+Q T + + +
Sbjct: 373 VVPSWAPQIPVLSHTSTGGFLCHCGWNSTLESISHGVPMIAWPLFAEQSTNRFLLVNEFK 552
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
+ + + + G V R+EVER +++M+G+ + R A +KAK A++ GGSS
Sbjct: 553 IAIEAKMESDGFVRREEVERAARELMEGEGGKRLRARAQELKEKAKTALEAGGSS 717
>gb|DR019885.1|DR019885 STRS1_33_D06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_D06_A034 3', mRNA sequence
Length = 846
Score = 120 bits (256), Expect = 1e-026
Identities = 48/124 (38%), Positives = 80/124 (64%)
Frame = +2 / +3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ +LAH +TG F +HCGWNS LE++ +GVP+ A P A+Q T + ++ +
Sbjct: 354 VVTSWAPQVAILAHPSTGGFVSHCGWNSVLESVSHGVPIIAWPLQAEQRTTAFFLVNDIK 533
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNIT 475
+ +RV++ G+V ++EVE+ K++M+G+ K A + AKAA+ GGSS++ +
Sbjct: 534 MAIRVQRGADGIVGKEEVEKAAKELMEGEEGKKKTARARELRESAKAALAEGGSSSQALA 713
Query: 476 EFAA 487
AA
Sbjct: 714 AVAA 725
>gb|CO413944.1|CO413944 EST844329 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMH59 5' end, mRNA sequence
Length = 923
Score = 107 bits (229), Expect(2) = 1e-026
Identities = 47/130 (36%), Positives = 73/130 (56%)
Frame = +2 / +3
Query: 92 RDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTIS 271
RD +I W PQL +L+H +TG F +HCGWNS LE++ G+P+ P +Q +
Sbjct: 324 RDTSGRGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNA 503
Query: 272 KYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNG 451
K+ + VR ++ + G+V R+EVER ++ V++ + R A+AA+ +G
Sbjct: 504 KWFVEQLRVAVRAQRGDGGVVPREEVERVVRVVLEDEGDLDVRGRVRNLAHVAQAAVVDG 683
Query: 452 GSSAKNITEF 481
GSSAKN F
Sbjct: 684 GSSAKNWDSF 713
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
EL GL SGK FIWV+R+ E
Sbjct: 207 ELAFGLQGSGKSFIWVLRTPPE 272
>gb|DN447754.1|DN447754 EST943553 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBW81 5' end, mRNA sequence
Length = 902
Score = 107 bits (229), Expect(2) = 1e-026
Identities = 47/130 (36%), Positives = 73/130 (56%)
Frame = +2 / +1
Query: 92 RDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTIS 271
RD +I W PQL +L+H +TG F +HCGWNS LE++ G+P+ P +Q +
Sbjct: 337 RDTSGRGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNA 516
Query: 272 KYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNG 451
K+ + VR ++ + G+V R+EVER ++ V++ + R A+AA+ +G
Sbjct: 517 KWFVEQLRVAVRAQRGDGGVVPREEVERVVRVVLEDEGDLDVRGRVRNLAHVAQAAVVDG 696
Query: 452 GSSAKNITEF 481
GSSAKN F
Sbjct: 697 GSSAKNWDSF 726
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
EL GL SGK FIWV+R+ E
Sbjct: 220 ELAFGLQGSGKSFIWVLRTPPE 285
>gb|DT624388.1|DT624388 EST1158663 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAE09 5' end, mRNA sequence
Length = 902
Score = 107 bits (229), Expect(2) = 1e-026
Identities = 47/130 (36%), Positives = 73/130 (56%)
Frame = +2 / +1
Query: 92 RDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTIS 271
RD +I W PQL +L+H +TG F +HCGWNS LE++ G+P+ P +Q +
Sbjct: 337 RDTSGRGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNA 516
Query: 272 KYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNG 451
K+ + VR ++ + G+V R+EVER ++ V++ + R A+AA+ +G
Sbjct: 517 KWFVEQLRVAVRAQRGDGGVVPREEVERVVRVVLEDEGDLDVRGRVRNLAHVAQAAVVDG 696
Query: 452 GSSAKNITEF 481
GSSAKN F
Sbjct: 697 GSSAKNWDSF 726
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
EL GL SGK FIWV+R+ E
Sbjct: 220 ELAFGLQGSGKSFIWVLRTPPE 285
>gb|CO410810.1|CO410810 EST841195 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALC10 5' end, mRNA sequence
Length = 898
Score = 107 bits (229), Expect(2) = 1e-026
Identities = 47/130 (36%), Positives = 73/130 (56%)
Frame = +2 / +1
Query: 92 RDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTIS 271
RD +I W PQL +L+H +TG F +HCGWNS LE++ G+P+ P +Q +
Sbjct: 337 RDTSGRGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNA 516
Query: 272 KYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNG 451
K+ + VR ++ + G+V R+EVER ++ V++ + R A+AA+ +G
Sbjct: 517 KWFVEQLRVAVRAQRGDGGVVPREEVERVVRVVLEDEGDLDVRGRVRNLAHVAQAAVVDG 696
Query: 452 GSSAKNITEF 481
GSSAKN F
Sbjct: 697 GSSAKNWDSF 726
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
EL GL SGK FIWV+R+ E
Sbjct: 220 ELAFGLQGSGKSFIWVLRTPPE 285
>gb|CO410963.1|CO410963 EST841348 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALE04 5' end, mRNA sequence
Length = 890
Score = 107 bits (229), Expect(2) = 1e-026
Identities = 47/130 (36%), Positives = 73/130 (56%)
Frame = +2 / +1
Query: 92 RDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTIS 271
RD +I W PQL +L+H +TG F +HCGWNS LE++ G+P+ P +Q +
Sbjct: 337 RDTSGRGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNA 516
Query: 272 KYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNG 451
K+ + VR ++ + G+V R+EVER ++ V++ + R A+AA+ +G
Sbjct: 517 KWFVEQLRVAVRAQRGDGGVVPREEVERVVRVVLEDEGDLDVRGRVRNLAHVAQAAVVDG 696
Query: 452 GSSAKNITEF 481
GSSAKN F
Sbjct: 697 GSSAKNWDSF 726
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
EL GL SGK FIWV+R+ E
Sbjct: 220 ELAFGLQGSGKSFIWVLRTPPE 285
>gb|CO368412.1|CO368412 RTK1_40_B05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_40_B05_A029 5', mRNA sequence
Length = 870
Score = 107 bits (229), Expect(2) = 1e-026
Identities = 47/130 (36%), Positives = 73/130 (56%)
Frame = +2 / -1
Query: 92 RDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTIS 271
RD +I W PQL +L+H +TG F +HCGWNS LE++ G+P+ P +Q +
Sbjct: 741 RDTSGRGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNA 562
Query: 272 KYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNG 451
K+ + VR ++ + G+V R+EVER ++ V++ + R A+AA+ +G
Sbjct: 561 KWFVEQLRVAVRAQRGDGGVVPREEVERVVRVVLEDEGDLDVRGRVRNLAHVAQAAVVDG 382
Query: 452 GSSAKNITEF 481
GSSAKN F
Sbjct: 381 GSSAKNWDSF 352
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / -1
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
EL GL SGK FIWV+R+ E
Sbjct: 858 ELAFGLQGSGKSFIWVLRTPPE 793
>gb|CO413888.1|CO413888 EST844273 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMG85 5' end, mRNA sequence
Length = 847
Score = 107 bits (229), Expect(2) = 1e-026
Identities = 47/130 (36%), Positives = 73/130 (56%)
Frame = +2 / +1
Query: 92 RDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTIS 271
RD +I W PQL +L+H +TG F +HCGWNS LE++ G+P+ P +Q +
Sbjct: 337 RDTSGRGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNA 516
Query: 272 KYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNG 451
K+ + VR ++ + G+V R+EVER ++ V++ + R A+AA+ +G
Sbjct: 517 KWFVEQLRVAVRAQRGDGGVVPREEVERVVRVVLEDEGDLDVRGRVRNLAHVAQAAVVDG 696
Query: 452 GSSAKNITEF 481
GSSAKN F
Sbjct: 697 GSSAKNWDSF 726
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
EL GL SGK FIWV+R+ E
Sbjct: 220 ELAFGLQGSGKSFIWVLRTPPE 285
>gb|DT625922.1|DT625922 EST1157846 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA518 5' end, mRNA sequence
Length = 823
Score = 107 bits (229), Expect(2) = 1e-026
Identities = 47/130 (36%), Positives = 73/130 (56%)
Frame = +2 / +3
Query: 92 RDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTIS 271
RD +I W PQL +L+H +TG F +HCGWNS LE++ G+P+ P +Q +
Sbjct: 258 RDTSGRGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNA 437
Query: 272 KYMESMWGLGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNG 451
K+ + VR ++ + G+V R+EVER ++ V++ + R A+AA+ +G
Sbjct: 438 KWFVEQLRVAVRAQRGDGGVVPREEVERVVRVVLEDEGDLDVRGRVRNLAHVAQAAVVDG 617
Query: 452 GSSAKNITEF 481
GSSAKN F
Sbjct: 618 GSSAKNWDSF 647
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSNEE 70
EL GL SGK FIWV+R+ E
Sbjct: 141 ELAFGLQGSGKSFIWVLRTPPE 206
>gb|DR177492.1|DR177492 RTMNUT1_5_D07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_5_D07_A029 5', mRNA sequence
Length = 727
Score = 106 bits (226), Expect(2) = 1e-025
Identities = 43/115 (37%), Positives = 71/115 (61%)
Frame = +2 / +3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ +LAH +TG + CGWNS LE++ +GVP+ P A+Q T + + +
Sbjct: 171 VVTSWAPQVAILAHPSTGGIISQCGWNSVLESVSHGVPIITWPLHAEQKTTAFLLVNDIQ 350
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
+ V K G+V ++EVE+ ++++M+G+ K R+ A + AKAA+ GGSS
Sbjct: 351 VAVGTHKGADGIVRKEEVEKAVRELMEGEVGKKRRERAKALKRSAKAAVAEGGSS 515
Score = 29.5 bits (58), Expect(2) = 1e-025
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 2 GELGNGLYNSGKPFIWVVRS 61
GEL GL SG+ F+WV+R+
Sbjct: 33 GELALGLDGSGQRFLWVLRN 92
>gb|CF394916.1|CF394916 RTDS2_8_F04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_F04_A021 5', mRNA sequence
Length = 816
Score = 105 bits (225), Expect(2) = 2e-025
Identities = 44/115 (38%), Positives = 70/115 (60%)
Frame = +2 / +2
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ +LAH +TG + CGWNS LE++ +GVP+ P A+Q T + + +
Sbjct: 266 VVTSWAPQVAILAHPSTGGIISQCGWNSVLESVSHGVPIITWPLHAEQKTTAFLLVNDIQ 445
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
+ V K G+V ++EVE+ +++M+G+ K R+ A Q AKAA+ GGSS
Sbjct: 446 VAVGTHKGADGIVRKEEVEKAARELMEGEVGKKRRERAKELKQSAKAAVAEGGSS 610
Score = 29.5 bits (58), Expect(2) = 2e-025
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 2 GELGNGLYNSGKPFIWVVRS 61
GEL GL SG+ F+WV+R+
Sbjct: 128 GELALGLDGSGQRFLWVLRN 187
>gb|CF394807.1|CF394807 RTDS2_7_F05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_7_F05_A021 5', mRNA sequence
Length = 731
Score = 105 bits (225), Expect(2) = 2e-025
Identities = 44/115 (38%), Positives = 70/115 (60%)
Frame = +2 / +3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ +LAH +TG + CGWNS LE++ +GVP+ P A+Q T + + +
Sbjct: 264 VVTSWAPQVAILAHPSTGGIISQCGWNSVLESVSHGVPIITWPLHAEQKTTAFLLVNDIQ 443
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
+ V K G+V ++EVE+ +++M+G+ K R+ A Q AKAA+ GGSS
Sbjct: 444 VAVGTHKGADGIVRKEEVEKAARELMEGEVGKKRRERAKELKQSAKAAVAEGGSS 608
Score = 29.5 bits (58), Expect(2) = 2e-025
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 2 GELGNGLYNSGKPFIWVVRS 61
GEL GL SG+ F+WV+R+
Sbjct: 126 GELALGLDGSGQRFLWVLRN 185
>gb|CV031446.1|CV031446 RTNACL1_1_D07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_1_D07_A029 5', mRNA sequence
Length = 734
Score = 97.3 bits (206), Expect(3) = 2e-025
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = +2 / +3
Query: 95 DKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISK 274
++ K+R L V W PQL+VLAH A G F THCGWNSTLE+I GVP+ +P++ADQ +
Sbjct: 375 ERTKDRTLFVQWAPQLKVLAHAAVGLFITHCGWNSTLESISLGVPVVGLPYFADQFLHCR 554
Query: 275 YMESMWGLGV 304
+ + +W +G+
Sbjct: 555 FAKDVWKIGL 584
Score = 30.4 bits (60), Expect(3) = 2e-025
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 5 ELGNGLYNSGKPFIWVVRSN 64
+L GL +G+PF+WV+RS+
Sbjct: 273 QLALGLEGTGQPFLWVLRSD 332
Score = 25.4 bits (49), Expect(3) = 2e-025
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2 / +3
Query: 317 DEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAM 442
++ LVT++EVE +K +M K R+ A + A A+
Sbjct: 606 NDNKLVTKEEVEDVVKTMMTTGIGQKLREKALTLKECAARAV 731
>gb|CF393594.1|CF393594 RTDR3_15_B07.b1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_15_B07_A022 3', mRNA
sequence
Length = 556
Score = 114 bits (244), Expect = 5e-025
Identities = 45/115 (39%), Positives = 72/115 (62%)
Frame = +2 / +1
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +TG F HCGWNSTLE+I +GVPM A P +A+Q + + +
Sbjct: 43 VVPSWAPQIPVLSHPSTGGFLCHCGWNSTLESISHGVPMIAWPLFAEQRMNKFLLVNEFQ 222
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
+ + + + G V ++EVER ++++M+G+ + R A + A A+Q GGSS
Sbjct: 223 VAIEAKMESDGFVRKEEVERAVRELMEGEGGKRVRARARELKEAANTALQEGGSS 387
>gb|DR091543.1|DR091543 RTAL1_22_H02.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_22_H02_A029 3', mRNA sequence
Length = 828
Score = 114 bits (244), Expect = 5e-025
Identities = 45/115 (39%), Positives = 72/115 (62%)
Frame = +2 / +1
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +TG F HCGWNSTLE+I +GVPM A P +A+Q + + +
Sbjct: 250 VVPSWAPQIPVLSHPSTGGFLCHCGWNSTLESISHGVPMIAWPLFAEQRMNKFLLVNEFQ 429
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSS 460
+ + + + G V ++EVER ++++M+G+ + R A + A A+Q GGSS
Sbjct: 430 VAIEAKMESDGFVRKEEVERAVRELMEGEGGKRVRARARELKEAANTALQEGGSS 594
>gb|DR054231.1|DR054231 RTCA1_16_B10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_16_B10_A029 3', mRNA sequence
Length = 855
Score = 97.7 bits (207), Expect(2) = 5e-025
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = +2 / +3
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L ++ K+R L V W PQL+VLAH G F THCGWNSTLE+I GVP+ +PH+ D
Sbjct: 168 LPEGFEERTKDRALFVQWAPQLKVLAHATVGLFITHCGWNSTLESISLGVPVVGLPHFGD 347
Query: 257 QPTISKYMESMWGLGV 304
Q ++ + +W +G+
Sbjct: 348 QFLHCRFAKDVWKIGL 395
Score = 36.3 bits (73), Expect(2) = 5e-025
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2 / +3
Query: 329 LVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
LVT++EVE +K +M K R+ A + A A+ GGSS N+ F
Sbjct: 429 LVTKEEVEDVVKTMMTTGIGQKLREKALKLKECAARAVLPGGSSFLNLNTF 581
>gb|DR015862.1|DR015862 STRS1_6_D07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_D07_A034 3', mRNA sequence
Length = 890
Score = 90.0 bits (190), Expect(3) = 5e-025
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +2 / +2
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L ++ K+R L V W PQ++VLAH + G F THCGWNS LE + GVP+ P++AD
Sbjct: 233 LPKGFEERTKKRALFVRWAPQVKVLAHPSVGLFLTHCGWNSMLENLGMGVPVVGFPYFAD 412
Query: 257 QPTISKYMESMWGLGV 304
Q ++ + +W +G+
Sbjct: 413 QFLNCRFAKEVWNIGL 460
Score = 32.2 bits (64), Expect(3) = 5e-025
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 5 ELGNGLYNSGKPFIWVVR 58
+L GL NSG+PF+WV+R
Sbjct: 149 QLALGLENSGQPFLWVLR 202
Score = 29.5 bits (58), Expect(3) = 5e-025
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2 / +2
Query: 317 DEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
D+ +VT++EVE +K +M R + ++A A+ GSS N+ F
Sbjct: 482 DDHKVVTKEEVEDVVKRMMRTVEGKTLRDNVLRLKERATKAVLPEGSSFLNLNAF 646
>gb|DR057749.1|DR057749 RTNIT1_7_C12.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_7_C12_A029 5', mRNA sequence
Length = 818
Score = 114 bits (243), Expect = 6e-025
Identities = 49/120 (40%), Positives = 73/120 (60%)
Frame = +2 / -3
Query: 128 WCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWGLGVR 307
W PQ+ VL+H +TG F +HCGWNST+E+I +GVPM A P +A+Q T + + + +
Sbjct: 816 WAPQIGVLSHPSTGGFLSHCGWNSTIESISHGVPMIAWPLFAEQRTNAFLLVKEMKVAIE 637
Query: 308 VRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEFAA 487
+K GLV R+EVER +++M G+ + +K M KA+ AM GGSS + A+
Sbjct: 636 AKKGADGLVKREEVERAARELMKGEVGMEMKKGMGELMGKARFAMAEGGSSYNALANVAS 457
>gb|DR694987.1|DR694987 EST1085080 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEJ19 3' end, mRNA sequence
Length = 809
Score = 113 bits (242), Expect = 9e-025
Identities = 44/114 (38%), Positives = 76/114 (66%)
Frame = +2 / +1
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +TG F +HCGWNS++E+I++GVPM A P + +Q + ++
Sbjct: 457 VVPSWAPQIPVLSHPSTGGFLSHCGWNSSIESILHGVPMIAWPIFGEQRMNAIFLVEANQ 636
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGS 457
+ + +K + GLV+++EVER ++++M+ +S + +K T MQ A A+ GGS
Sbjct: 637 VAIEPKKGQNGLVSKEEVERVVRELMEAESGVETKKRMTELMQTAHNAISEGGS 798
>gb|DR112323.1|DR112323 RTS1_27_H07.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_27_H07_A029 3', mRNA sequence
Length = 647
Score = 95.0 bits (201), Expect(2) = 9e-025
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +2 / +3
Query: 77 LSNELRDKCKERGLIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWAD 256
L + ++ K+R L+V W PQ++VLAH + G F TH GWNSTLE+I GVP+ +P++AD
Sbjct: 9 LPDGFEERTKDRALLVRWAPQVKVLAHTSVGLFLTHAGWNSTLESISMGVPVVGLPYFAD 188
Query: 257 QPTISKYMESMWGLGVRVRKDEKG 328
Q ++ + +W +G+ E G
Sbjct: 189 QYLNCRFAQDVWEVGLNFEGVEVG 260
Score = 38.2 bits (77), Expect(2) = 9e-025
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2 / +3
Query: 308 VRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNITEF 481
V E+ +V+++EVE ++ +M ++ RK+A + A A+ GGSS N++ F
Sbjct: 249 VEVGEQKVVSKEEVEGIVRAMMTTTKGEQLRKNALKMKEYATKAVVPGGSSFNNLSTF 422
>gb|BX681374.1|BX681374 BX681374 RS Pinus pinaster cDNA clone RS58A01, mRNA sequence
Length = 637
Score = 113 bits (241), Expect = 1e-024
Identities = 45/124 (36%), Positives = 79/124 (63%)
Frame = +2 / +1
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ VL+H +TG F +HCGWNS++E+I++G+PM A P +++Q + ++
Sbjct: 220 VVPSWAPQTPVLSHPSTGGFLSHCGWNSSIESILHGLPMIAWPIFSEQRMNAIFLVEEKQ 399
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNIT 475
+ + +K GLV+++EVER ++++M+G+S + +K MQ A A+ GGSS +
Sbjct: 400 VAIEPKKGPNGLVSKEEVERVVRELMEGESGVETKKRMKELMQTAHNAISEGGSSYNTMA 579
Query: 476 EFAA 487
A+
Sbjct: 580 TLAS 591
>gb|CO367803.1|CO367803 RTK1_36_E12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_E12_A029 5', mRNA sequence
Length = 828
Score = 112 bits (240), Expect = 2e-024
Identities = 45/119 (37%), Positives = 74/119 (62%)
Frame = +2 / -2
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +T F +HCGWNSTLE+I +GVPM P +A+Q + +
Sbjct: 701 VVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPMICWPLFAEQKMNRILLVDEFK 522
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
+G+ + + G V R EVER ++++M+G+S + R T + A ++++ GGSS K +
Sbjct: 521 VGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYKGM 345
>gb|DR057313.1|DR057313 RTNIT1_5_C03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_5_C03_A029 3', mRNA sequence
Length = 787
Score = 112 bits (240), Expect = 2e-024
Identities = 45/119 (37%), Positives = 74/119 (62%)
Frame = +2 / +3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +T F +HCGWNSTLE+I +GVPM P +A+Q + +
Sbjct: 36 VVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPMICWPLFAEQKMNRILLVDEFK 215
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
+G+ + + G V R EVER ++++M+G+S + R T + A ++++ GGSS K +
Sbjct: 216 VGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYKGM 392
>gb|DR057656.1|DR057656 RTNIT1_7_C03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_7_C03_A029 3', mRNA sequence
Length = 788
Score = 112 bits (240), Expect = 2e-024
Identities = 45/119 (37%), Positives = 74/119 (62%)
Frame = +2 / +1
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +T F +HCGWNSTLE+I +GVPM P +A+Q + +
Sbjct: 37 VVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPMICWPLFAEQKMNRILLVDEFK 216
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
+G+ + + G V R EVER ++++M+G+S + R T + A ++++ GGSS K +
Sbjct: 217 VGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYKGM 393
>gb|DR160776.1|DR160776 RTFE1_8_B03.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_8_B03_A029 3', mRNA sequence
Length = 782
Score = 112 bits (240), Expect = 2e-024
Identities = 45/119 (37%), Positives = 74/119 (62%)
Frame = +2 / +3
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +T F +HCGWNSTLE+I +GVPM P +A+Q + +
Sbjct: 36 VVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPMICWPLFAEQKMNRILLVDEFK 215
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
+G+ + + G V R EVER ++++M+G+S + R T + A ++++ GGSS K +
Sbjct: 216 VGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYKGM 392
>gb|DR160864.1|DR160864 RTFE1_8_B03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_8_B03_A029 5', mRNA sequence
Length = 918
Score = 112 bits (240), Expect = 2e-024
Identities = 45/119 (37%), Positives = 74/119 (62%)
Frame = +2 / +2
Query: 116 LIVSWCPQLEVLAHKATGCFFTHCGWNSTLEAIVNGVPMAAIPHWADQPTISKYMESMWG 295
++ SW PQ+ VL+H +T F +HCGWNSTLE+I +GVPM P +A+Q + +
Sbjct: 284 VVSSWAPQIPVLSHPSTAGFLSHCGWNSTLESISHGVPMICWPLFAEQKMNRILLVDEFK 463
Query: 296 LGVRVRKDEKGLVTRDEVERCIKDVMDGDSKDKYRKSATMWMQKAKAAMQNGGSSAKNI 472
+G+ + + G V R EVER ++++M+G+S + R T + A ++++ GGSS K +
Sbjct: 464 VGIPAKMESDGFVRRGEVERAVRELMEGESGMRVRARVTELKEAAVSSLEEGGSSYKGM 640
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 323,045,752
Number of Sequences: 355925
Number of extensions: 4761973
Number of successful extensions: 72613
Number of sequences better than 1.0e-020: 158
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 7055564100
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)