TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAZ4d09.yg.2.1
(542 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO167692.1|CO167692 FLD1_70_C03.g1_A029 Root flooded Pin... 194 4e-049
gb|CF390662.1|CF390662 RTDR2_20_D03.g1_A021 Loblolly pine r... 193 1e-048
gb|CO367342.1|CO367342 RTK1_33_E12.g1_A029 Roots minus pota... 193 1e-048
gb|CO367804.1|CO367804 RTK1_36_F02.g1_A029 Roots minus pota... 193 1e-048
gb|CF474025.1|CF474025 RTWW2_18_D06.b1_A021 Well-watered lo... 192 1e-048
gb|DR167860.1|DR167860 RTPHOS1_21_D01.g1_A029 Roots minus p... 192 1e-048
gb|DR384632.1|DR384632 RTHG1_3_B11.g1_A029 Roots plus added... 192 1e-048
gb|CF476506.1|CF476506 RTWW3_1_C09.g1_A022 Well-watered lob... 191 4e-048
gb|CO197528.1|CO197528 GEO1_7_D07.b1_A029 Root gravitropism... 191 4e-048
gb|CO363787.1|CO363787 RTK1_11_G02.g1_A029 Roots minus pota... 191 4e-048
gb|DR071708.1|DR071708 RTDK1_21_D03.g1_A029 Roots, dark Pin... 191 4e-048
gb|CF470628.1|CF470628 RTDS1_13_E12.g1_A015 Drought-stresse... 190 5e-048
gb|DR687035.1|DR687035 EST1077113 Normalized pine embryo li... 190 7e-048
gb|CF392847.1|CF392847 RTDR3_19_G07.g1_A022 Loblolly pine r... 188 2e-047
gb|DR385454.1|DR385454 RTHG1_8_F06.g1_A029 Roots plus added... 188 2e-047
gb|BQ696558.1|BQ696558 NXPV_042_F03_F NXPV (Nsf Xylem Plani... 187 7e-047
gb|CO166712.1|CO166712 FLD1_64_A09.b1_A029 Root flooded Pin... 187 7e-047
gb|CV032789.1|CV032789 RTNACL1_18_H01.b1_A029 Roots plus ad... 184 4e-046
gb|DR091559.1|DR091559 RTAL1_22_A11.g1_A029 Roots plus adde... 184 4e-046
gb|CO369832.1|CO369832 RTK1_54_A12.g1_A029 Roots minus pota... 182 2e-045
gb|BG485786.1|BG485786 NXPV_038_G10_F NXPV (Nsf Xylem Plani... 179 1e-044
gb|BQ695720.1|BQ695720 NXPV_031_H12_F NXPV (Nsf Xylem Plani... 168 3e-041
gb|BG485740.1|BG485740 NXPV_038_C08_F NXPV (Nsf Xylem Plani... 167 4e-041
gb|DR120323.1|DR120323 RTMG1_29_A06.b1_A029 Roots minus mag... 167 6e-041
gb|CX648371.1|CX648371 COLD1_28_F03.b1_A029 Root cold Pinus... 161 4e-039
gb|DR078785.1|DR078785 RTFEPL1_6_G09.g1_A029 Roots plus add... 91 1e-035
gb|BQ697505.1|BQ697505 NXPV_054_B12_F NXPV (Nsf Xylem Plani... 145 2e-034
gb|DR110236.1|DR110236 RTS1_9_E09.g1_A029 Roots minus sulfu... 138 4e-032
gb|CF398243.1|CF398243 RTDS3_24_B05.b1_A022 Drought-stresse... 136 1e-031
gb|CF399047.1|CF399047 RTDS3_9_G06.b1_A022 Drought-stressed... 136 1e-031
gb|DR384820.1|DR384820 RTHG1_4_F11.g1_A029 Roots plus added... 134 4e-031
gb|CF399147.1|CF399147 RTDS3_9_G06.g1_A022 Drought-stressed... 134 5e-031
gb|CO171061.1|CO171061 NDL1_18_F06.g1_A029 Needles control ... 127 4e-029
gb|DR078570.1|DR078570 RTFEPL1_5_C05.g1_A029 Roots plus add... 127 4e-029
gb|DR092668.1|DR092668 STRR1_2_H07.g1_A033 Stem Response Re... 127 4e-029
gb|DR682638.1|DR682638 EST1072713 Normalized pine embryo li... 127 6e-029
gb|BQ696700.1|BQ696700 NXPV_044_D04_F NXPV (Nsf Xylem Plani... 126 1e-028
gb|DR112232.1|DR112232 RTS1_26_F04.g1_A029 Roots minus sulf... 109 2e-028
gb|DR025171.1|DR025171 STRS1_70_C04.b1_A034 Shoot tip pitch... 124 4e-028
gb|DR079014.1|DR079014 RTFEPL1_8_A01.g1_A029 Roots plus add... 122 1e-027
gb|DT631215.1|DT631215 EST1146146 Normalized pine embryo li... 122 2e-027
gb|CF398276.1|CF398276 RTDS3_24_B05.g1_A022 Drought-stresse... 122 3e-027
gb|AW010686.1|AW010686 ST11A02 Pine TriplEx shoot tip libra... 55 8e-026
gb|CF477126.1|CF477126 RTWW3_5_G08.g1_A022 Well-watered lob... 114 4e-025
gb|DR079462.1|DR079462 RTFEPL1_11_A03.g1_A029 Roots plus ad... 114 4e-025
gb|DR094118.1|DR094118 STRR1_12_C07.g1_A033 Stem Response R... 114 4e-025
gb|BX254061.1|BX254061 BX254061 Pinus pinaster differenciat... 113 8e-025
gb|BX254250.1|BX254250 BX254250 Pinus pinaster differenciat... 112 2e-024
gb|CF390060.1|CF390060 RTDR2_12_A06.b1_A021 Loblolly pine r... 112 2e-024
gb|DR111727.1|DR111727 RTS1_19_G06.g1_A029 Roots minus sulf... 106 9e-023
gb|DR745034.1|DR745034 RTCU1_26_C08.g1_A029 Roots plus adde... 101 4e-021
gb|CF478049.1|CF478049 RTWW3_17_E06.g1_A022 Well-watered lo... 77 7e-021
>gb|CO167692.1|CO167692 FLD1_70_C03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_70_C03_A029 5', mRNA sequence
Length = 650
Score = 194 bits (418), Expect = 4e-049
Identities = 81/156 (51%), Positives = 108/156 (69%)
Frame = +1 / +1
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+FLQFG+AGM +IS +L +GM+H+VLVVYR VA +V+APFA +FERK RPK+
Sbjct: 1 PYVAMIFLQFGYAGMAIISKVALNRGMNHFVLVVYRQTVATVVLAPFAFFFERKVRPKLK 180
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
+F +I LGLLEPV+DQNF Y+G+ TS +++ L N+LPA+TFV A++ RME + I
Sbjct: 181 FSIFCQIFVLGLLEPVMDQNFYYLGLKLTSPTYAVTLINVLPAMTFVMALLFRMESLNIK 360
Query: 433 XRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
RSQA GT V +LM L I+ S H
Sbjct: 361 KLRSQAKIVGTIVCVGGAMLMTLYKGPILQMHWSLH 468
>gb|CF390662.1|CF390662 RTDR2_20_D03.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_D03_A021 5', mRNA
sequence
Length = 759
Score = 193 bits (415), Expect = 1e-048
Identities = 81/156 (51%), Positives = 110/156 (70%)
Frame = +1 / +3
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +I+ SL +GM+H+VLVVYR+ A +V+APFA + ERK RPK++
Sbjct: 135 PYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLT 314
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
P+F +I LGLL PV+DQNF Y+G+ TS +++ AL+N+LPA+TFV A+I RMER+ I
Sbjct: 315 FPIFWQIFVLGLLGPVIDQNFYYLGLKLTSPTYACALSNVLPAMTFVMALIFRMERVNIK 494
Query: 433 XRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
RSQA GT V +LM L I+ S H
Sbjct: 495 NLRSQAKIVGTIVCVGGAMLMTLYKGPIVPMLWSPH 602
>gb|CO367342.1|CO367342 RTK1_33_E12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_33_E12_A029 5', mRNA sequence
Length = 765
Score = 193 bits (415), Expect = 1e-048
Identities = 81/156 (51%), Positives = 110/156 (70%)
Frame = +1 / +3
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +I+ SL +GM+H+VLVVYR+ A +V+APFA + ERK RPK++
Sbjct: 96 PYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLT 275
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
P+F +I LGLL PV+DQNF Y+G+ TS +++ AL+N+LPA+TFV A+I RMER+ I
Sbjct: 276 FPIFWQIFVLGLLGPVIDQNFYYLGLKLTSPTYACALSNVLPAMTFVMALIFRMERVNIK 455
Query: 433 XRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
RSQA GT V +LM L I+ S H
Sbjct: 456 NLRSQAKIVGTIVCVGGAMLMTLYKGPIVPMLWSPH 563
>gb|CO367804.1|CO367804 RTK1_36_F02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_F02_A029 5', mRNA sequence
Length = 751
Score = 193 bits (415), Expect = 1e-048
Identities = 81/156 (51%), Positives = 110/156 (70%)
Frame = +1 / +1
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +I+ SL +GM+H+VLVVYR+ A +V+APFA + ERK RPK++
Sbjct: 124 PYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLT 303
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
P+F +I LGLL PV+DQNF Y+G+ TS +++ AL+N+LPA+TFV A+I RMER+ I
Sbjct: 304 FPIFWQIFVLGLLGPVIDQNFYYLGLKLTSPTYACALSNVLPAMTFVMALIFRMERVNIK 483
Query: 433 XRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
RSQA GT V +LM L I+ S H
Sbjct: 484 NLRSQAKIVGTIVCVGGAMLMTLYKGPIVPMLWSPH 591
>gb|CF474025.1|CF474025 RTWW2_18_D06.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_18_D06_A021 3', mRNA sequence
Length = 698
Score = 192 bits (414), Expect = 1e-048
Identities = 84/163 (51%), Positives = 110/163 (67%)
Frame = +1 / -2
Query: 31 SDRMELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAP 210
S R L+ + K PY+AM+ LQFG+AGM +I+ SL GMSHYVLVVYR+ VA VMAP
Sbjct: 604 SRRSRLSRVFEKSKPYIAMISLQFGYAGMNIITKVSLTNGMSHYVLVVYRHAVATAVMAP 425
Query: 211 FALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTF 390
FA + ERK RPK++ +F +I ALGLL PV+DQNF Y G+ TS +F+ A++N+LPA+TF
Sbjct: 424 FAFFVERKVRPKITFSIFCQIFALGLLGPVIDQNFYYAGLKYTSPTFACAMSNVLPAMTF 245
Query: 391 VNAIILRMERIVIXXRRSQAXXXGTAXTVXXXLLMILXXXXII 519
V A + RME++ I RSQ GT V +LM L I+
Sbjct: 244 VMAALFRMEKVDIKMVRSQTKIAGTVVCVGGAMLMTLYKGPIV 116
>gb|DR167860.1|DR167860 RTPHOS1_21_D01.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_21_D01_A029 5', mRNA sequence
Length = 623
Score = 192 bits (414), Expect = 1e-048
Identities = 84/163 (51%), Positives = 110/163 (67%)
Frame = +1 / +3
Query: 31 SDRMELAGTWRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAP 210
S R L+ + K PY+AM+ LQFG+AGM +I+ SL GMSHYVLVVYR+ VA VMAP
Sbjct: 69 SRRSRLSRVFEKSKPYIAMISLQFGYAGMNIITKVSLTNGMSHYVLVVYRHAVATAVMAP 248
Query: 211 FALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTF 390
FA + ERK RPK++ +F +I ALGLL PV+DQNF Y G+ TS +F+ A++N+LPA+TF
Sbjct: 249 FAFFVERKVRPKITFSIFCQIFALGLLGPVIDQNFYYAGLKYTSPTFACAMSNVLPAMTF 428
Query: 391 VNAIILRMERIVIXXRRSQAXXXGTAXTVXXXLLMILXXXXII 519
V A + RME++ I RSQ GT V +LM L I+
Sbjct: 429 VMAALFRMEKVDIKMVRSQTKIAGTVVCVGGAMLMTLYKGPIV 557
>gb|DR384632.1|DR384632 RTHG1_3_B11.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_3_B11_A029 5', mRNA sequence
Length = 743
Score = 192 bits (414), Expect = 1e-048
Identities = 81/156 (51%), Positives = 110/156 (70%)
Frame = +1 / +3
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +I+ SL +GM+H+VLVVYR+ A +V+APFA + ERK RPK++
Sbjct: 162 PYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKARPKLT 341
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
P+F +I LGLL PV+DQNF Y+G+ TS +++ AL+N+LPA+TFV A+I RMER+ I
Sbjct: 342 FPIFWQIFVLGLLGPVIDQNFYYLGLKLTSPTYACALSNVLPAMTFVIALIFRMERVNIK 521
Query: 433 XRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
RSQA GT V +LM L I+ S H
Sbjct: 522 NLRSQAKIVGTIVCVGGAMLMTLYKGPIVPMLWSPH 629
>gb|CF476506.1|CF476506 RTWW3_1_C09.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_1_C09_A022 5', mRNA sequence
Length = 638
Score = 191 bits (411), Expect = 4e-048
Identities = 80/159 (50%), Positives = 110/159 (69%)
Frame = +1 / +2
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K PY+AM+ LQFG+AGM +IS SL +GM+H+VLVVYR+ A +V+APFA + ERK RP
Sbjct: 101 KSKPYVAMISLQFGYAGMNIISKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRP 280
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
K++ +F++I LGLL PV+DQNF Y+G+ TS +++ AL+N+LPA+TFV A++ RME +
Sbjct: 281 KLTFSIFLQIFVLGLLGPVIDQNFYYLGLKLTSPTYACALSNVLPAMTFVMALLFRMETV 460
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
I RSQA GT V +LM L I+ S H
Sbjct: 461 NIKKLRSQAKIAGTIVCVAGAMLMTLYKGPIVPMLWSPH 577
>gb|CO197528.1|CO197528 GEO1_7_D07.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_7_D07_A029 3', mRNA sequence
Length = 768
Score = 191 bits (411), Expect = 4e-048
Identities = 82/143 (57%), Positives = 106/143 (74%)
Frame = +1 / -3
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +IS SL GM+H+VLVVYR+ VA IV+APFA + ERK RPK++
Sbjct: 610 PYVAMISLQFGYAGMNIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKIT 431
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
+F +I ALGLL PVLDQNF Y+G+ TS ++S AL+N+LPA+TFV A++ RMER+ I
Sbjct: 430 FSIFCQIFALGLLGPVLDQNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFRMERVNIK 251
Query: 433 XRRSQAXXXGTAXTVXXXLLMIL 501
RSQA GT V +LM L
Sbjct: 250 QVRSQAKILGTIVCVGGAMLMTL 182
>gb|CO363787.1|CO363787 RTK1_11_G02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_11_G02_A029 5', mRNA sequence
Length = 746
Score = 191 bits (411), Expect = 4e-048
Identities = 82/143 (57%), Positives = 106/143 (74%)
Frame = +1 / +1
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +IS SL GM+H+VLVVYR+ VA IV+APFA + ERK RPK++
Sbjct: 151 PYVAMISLQFGYAGMNIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKIT 330
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
+F +I ALGLL PVLDQNF Y+G+ TS ++S AL+N+LPA+TFV A++ RMER+ I
Sbjct: 331 FSIFCQIFALGLLGPVLDQNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFRMERVNIK 510
Query: 433 XRRSQAXXXGTAXTVXXXLLMIL 501
RSQA GT V +LM L
Sbjct: 511 QVRSQAKILGTIVCVGGAMLMTL 579
>gb|DR071708.1|DR071708 RTDK1_21_D03.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_21_D03_A029 5', mRNA sequence
Length = 724
Score = 191 bits (411), Expect = 4e-048
Identities = 82/143 (57%), Positives = 106/143 (74%)
Frame = +1 / +2
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +IS SL GM+H+VLVVYR+ VA IV+APFA + ERK RPK++
Sbjct: 143 PYVAMISLQFGYAGMNIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKIT 322
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
+F +I ALGLL PVLDQNF Y+G+ TS ++S AL+N+LPA+TFV A++ RMER+ I
Sbjct: 323 FSIFCQIFALGLLGPVLDQNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFRMERVNIK 502
Query: 433 XRRSQAXXXGTAXTVXXXLLMIL 501
RSQA GT V +LM L
Sbjct: 503 QVRSQAKILGTIVCVGGAMLMTL 571
>gb|CF470628.1|CF470628 RTDS1_13_E12.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_E12_A015 5', mRNA sequence
Length = 716
Score = 190 bits (410), Expect = 5e-048
Identities = 82/159 (51%), Positives = 109/159 (68%)
Frame = +1 / +1
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K PY+AM+ LQFG+AGM +IS SL +GMSH+VLVVYR VA +V+APFA + ERK RP
Sbjct: 106 KSTPYVAMISLQFGYAGMNIISKVSLNRGMSHFVLVVYRQAVATVVLAPFAFFLERKMRP 285
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
K++ +F +I LGLL PV+DQNF Y+G+ TS +++ AL+N+LP +TFV A++LRMER+
Sbjct: 286 KLTFSIFCQIFVLGLLGPVIDQNFSYLGLKLTSPTYACALSNVLPCMTFVIALLLRMERV 465
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
I RS A GT V +LM L I+ S H
Sbjct: 466 NIKKLRSGAKLVGTIVCVGGAMLMTLYKGPIVRMFWSHH 582
>gb|DR687035.1|DR687035 EST1077113 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABM57 3' end, mRNA sequence
Length = 669
Score = 190 bits (409), Expect = 7e-048
Identities = 80/160 (50%), Positives = 111/160 (69%)
Frame = +1 / +1
Query: 61 RKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTR 240
+K PY+AM+ LQFG+AGM +++ SL +GM+H+VLVVYR+ A +V+APFA + ERK R
Sbjct: 130 QKSKPYIAMISLQFGYAGMNILTKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFVERKVR 309
Query: 241 PKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMER 420
PK++ +F + LGLL PV+DQN Y+G+ TS +++SAL+N+LPA+TFV A+I RMER
Sbjct: 310 PKLTFSIFCQSFVLGLLGPVIDQNLYYLGLKLTSPTYASALSNVLPAMTFVMALIFRMER 489
Query: 421 IVIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
+ I RRSQA GT V +LM L I+ S H
Sbjct: 490 LNIKKRRSQAKIVGTIVCVVGAILMTLYKGPIVRMFWSPH 609
>gb|CF392847.1|CF392847 RTDR3_19_G07.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_19_G07_A022 5', mRNA
sequence
Length = 843
Score = 188 bits (406), Expect = 2e-047
Identities = 79/159 (49%), Positives = 111/159 (69%)
Frame = +1 / +2
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K PY+AM+ LQFG+AGM +I+ SL +GM+H+VLVVYR+ VA +V+APFA + ERK RP
Sbjct: 140 KSKPYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAVATVVLAPFAFFIERKVRP 319
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
K++ +F +I LGLL PV+DQNF Y+G+ TS +++ AL+N+LPA+TF+ A++ RME++
Sbjct: 320 KLTFHIFCQIFVLGLLGPVIDQNFYYLGLKLTSPTYACALSNVLPAMTFMMALLFRMEKV 499
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
I RSQA GT V +LM L I+ S H
Sbjct: 500 NIKNLRSQAKIVGTIVCVVGAILMTLYKGPIVPMLWSPH 616
>gb|DR385454.1|DR385454 RTHG1_8_F06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_F06_A029 5', mRNA sequence
Length = 821
Score = 188 bits (406), Expect = 2e-047
Identities = 80/159 (50%), Positives = 107/159 (67%)
Frame = +1 / +1
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K PY+AM+ LQFG+AGM +IS +L +GM+H+VLVVYR VA +V+APFA +FER RP
Sbjct: 52 KGKPYVAMISLQFGYAGMAIISKVALNRGMNHFVLVVYRQTVATVVLAPFAFFFERNVRP 231
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
K+ +F +I LGLLEPV+DQNF Y+G+ TS +++ L N+LPA+TFV A++ RME +
Sbjct: 232 KLKFSIFCQIFVLGLLEPVMDQNFYYLGLKLTSPTYAVTLINVLPAMTFVMALLFRMESL 411
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
I RSQA GT V +LM L I+ S H
Sbjct: 412 NIKKLRSQAKIVGTIVCVGGAMLMTLYKGPILQMHWSLH 528
>gb|BQ696558.1|BQ696558 NXPV_042_F03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_042_F03 5' similar to Arabidopsis
thaliana sequence At5g07050 MtN21 nodulin protein-like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 645
Score = 187 bits (402), Expect = 7e-047
Identities = 82/143 (57%), Positives = 105/143 (73%)
Frame = +1 / +1
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +IS SL GM+H+VLVVYR+ VA IV+APFA + ERK RPK++
Sbjct: 148 PYVAMISLQFGYAGMNIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKIT 327
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
+F +I ALGLL PVLDQNF Y+G+ TS ++S AL+N+LPA+TFV A++ MER+ I
Sbjct: 328 FSIFCQIFALGLLGPVLDQNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFXMERVNIK 507
Query: 433 XRRSQAXXXGTAXTVXXXLLMIL 501
RSQA GT V LM L
Sbjct: 508 QVRSQAKILGTIVCVXGAXLMTL 576
>gb|CO166712.1|CO166712 FLD1_64_A09.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_64_A09_A029 3', mRNA sequence
Length = 789
Score = 187 bits (402), Expect = 7e-047
Identities = 80/161 (49%), Positives = 107/161 (66%)
Frame = +1 / -1
Query: 58 WRKVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKT 237
+ K PY+AM+ LQFG+AGM +IS +L +GM+H+VLVVYR VA +V+APFA +FER
Sbjct: 765 FEKGKPYVAMISLQFGYAGMTIISKVALNRGMNHFVLVVYRQTVATVVLAPFAFFFERNV 586
Query: 238 RPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRME 417
RPK+ +F +I LGLLEPV+DQNF Y+G+ TS +++ L NILPA+TFV A++ RME
Sbjct: 585 RPKLKFSIFCQIFVLGLLEPVMDQNFYYLGLKLTSPTYAVTLMNILPAMTFVMALLFRME 406
Query: 418 RIVIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
+ I RSQA G V +LM L I+ S H
Sbjct: 405 SLNIKKLRSQAKIVGMIVCVGGAMLMTLYKGPILQMHWSLH 283
>gb|CV032789.1|CV032789 RTNACL1_18_H01.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_18_H01_A029 3', mRNA sequence
Length = 788
Score = 184 bits (396), Expect = 4e-046
Identities = 78/159 (49%), Positives = 109/159 (68%)
Frame = +1 / -3
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K PY+AM+ +QFG+AGM +I+ SL +GM+HYVLVVYR+ A I +APFA + ERK RP
Sbjct: 666 KSKPYVAMISMQFGYAGMNIITKVSLNRGMNHYVLVVYRHAAATIALAPFAFFVERKVRP 487
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
K++ F ++ LGLL PVLDQNF Y+G+ T+ +F+ AL+N+LPA+TFV A++ RME++
Sbjct: 486 KLTFYTFCQMFVLGLLGPVLDQNFYYLGLKLTTPTFACALSNLLPAMTFVMALLFRMEKV 307
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
I RSQA GT +V +LM L ++ S H
Sbjct: 306 NIKNIRSQAKIVGTILSVGGAMLMTLYKGPVVPMPWSPH 190
>gb|DR091559.1|DR091559 RTAL1_22_A11.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_22_A11_A029 5', mRNA sequence
Length = 845
Score = 184 bits (396), Expect = 4e-046
Identities = 79/159 (49%), Positives = 106/159 (66%)
Frame = +1 / +3
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K PY+AM+ LQFG+AGM +IS +L +GM+H+VLVVYR VA +V++PFA +FER RP
Sbjct: 54 KGKPYVAMISLQFGYAGMTIISKVALDRGMNHFVLVVYRQTVATVVLSPFAFFFERNVRP 233
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
K+ +F +I LGLLEPV+DQNF Y+G+ TS +++ L NILPA+TFV A++ RME +
Sbjct: 234 KLKFSIFCQIFVLGLLEPVMDQNFYYLGLKLTSPTYAVTLMNILPAMTFVMALLFRMESL 413
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
I RSQA G V +LM L I+ S H
Sbjct: 414 NIKKLRSQAKIVGMIVCVGGAMLMTLYKGPILQMHWSLH 530
>gb|CO369832.1|CO369832 RTK1_54_A12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_54_A12_A029 5', mRNA sequence
Length = 520
Score = 182 bits (392), Expect = 2e-045
Identities = 74/128 (57%), Positives = 100/128 (78%)
Frame = +1 / +2
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K PY+AM+ LQFG+AGM +I+ SL +GM+H+VLVVYR+ A +V+APFA + ERK RP
Sbjct: 137 KSKPYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRP 316
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
K++ P+F +I LGLL PV+DQNF YMG+ TS +++SAL+N+LPA+TFV A+I RMER+
Sbjct: 317 KLTFPIFWQIFVLGLLGPVIDQNFYYMGLKLTSPTYASALSNLLPAMTFVMALIFRMERV 496
Query: 424 VIXXRRSQ 447
I RSQ
Sbjct: 497 NIKNIRSQ 520
>gb|BG485786.1|BG485786 NXPV_038_G10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_038_G10 5' similar to Arabidopsis
thaliana sequence At5g07050 MtN21 nodulin protein-like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 585
Score = 179 bits (386), Expect = 1e-044
Identities = 79/141 (56%), Positives = 103/141 (73%)
Frame = +1 / +2
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +IS SL GM+H+VLVVYR+ VA IV+APFA + ERK RPK++
Sbjct: 143 PYVAMISLQFGYAGMNIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKIT 322
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
+F +I ALGL PVLDQNF Y+G+ TS ++S AL+N+ A+TFV A++ R ER+ I
Sbjct: 323 FSIFCQIFALGLXXPVLDQNFYYLGLKLTSPTYSCALSNVXXAMTFVIALVFRXERVNIK 502
Query: 433 XRRSQAXXXGTAXTVXXXLLM 495
RSQA GT V +LM
Sbjct: 503 XXRSQAKILGTIVCVXGAMLM 565
>gb|BQ695720.1|BQ695720 NXPV_031_H12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_031_H12 5' similar to Arabidopsis
thaliana sequence At5g07050 MtN21 nodulin protein-like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 531
Score = 168 bits (361), Expect = 3e-041
Identities = 69/119 (57%), Positives = 92/119 (77%)
Frame = +1 / +2
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +IS SL GM+H+VLVVYR+ VA IV+APFA + ERK RPK++
Sbjct: 146 PYVAMISLQFGYAGMNIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKIT 325
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVI 429
+F +I ALGL PVLD NF Y+G+ TS ++S AL+N+LPA+TFV A++ MER+ I
Sbjct: 326 FSIFCQIFALGLXXPVLDXNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFXMERVNI 502
>gb|BG485740.1|BG485740 NXPV_038_C08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_038_C08 5' similar to Arabidopsis
thaliana sequence At5g07050 MtN21 nodulin protein-like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 417
Score = 167 bits (360), Expect = 4e-041
Identities = 75/136 (55%), Positives = 97/136 (71%)
Frame = +1 / +2
Query: 94 LQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSLPVFIKI 273
LQFG+AGM +IS SL GM+H+VLVVYR+ VA IV+APFA + ERK RPK++ +F +I
Sbjct: 5 LQFGYAGMNIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKITFSIFCQI 184
Query: 274 LALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIXXRRSQAX 453
ALGL PVL NF Y+G+ TS ++S AL+N+LPA+TFV A++ MER+ I RSQA
Sbjct: 185 FALGLXXPVLXXNFYYLGLKLTSPTYSCALSNVLPAMTFVIALVFXMERVNIKXXRSQAK 364
Query: 454 XXGTAXTVXXXLLMIL 501
GT +LM L
Sbjct: 365 ILGTIVCXXGAMLMTL 412
>gb|DR120323.1|DR120323 RTMG1_29_A06.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_29_A06_A029 3', mRNA sequence
Length = 866
Score = 167 bits (359), Expect = 6e-041
Identities = 73/144 (50%), Positives = 97/144 (67%)
Frame = +1 / -3
Query: 109 AGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSLPVFIKILALGL 288
AGM +IS SL +GMSH+VLVVYR VA +V+APFA + ERK RPK++ +F +I LGL
Sbjct: 855 AGMNIISKVSLNRGMSHFVLVVYRQAVATVVLAPFAFFLERKMRPKLTFSIFCQIFVLGL 676
Query: 289 LEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIXXRRSQAXXXGTA 468
L PV+DQNF Y+G+ TS +++ AL+N+LP +TFV A++LRMER+ I RS A GT
Sbjct: 675 LGPVIDQNFSYLGLKLTSPTYACALSNVLPCMTFVIALLLRMERVNIKKLRSGAKLVGTI 496
Query: 469 XTVXXXLLMILXXXXIIXXXXSXH 540
V +LM L I+ S H
Sbjct: 495 VCVGGAMLMTLYKGPIVRMFWSHH 424
>gb|CX648371.1|CX648371 COLD1_28_F03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_F03_A029 3', mRNA sequence
Length = 766
Score = 161 bits (346), Expect = 4e-039
Identities = 73/148 (49%), Positives = 95/148 (64%)
Frame = +1 / -1
Query: 97 QFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSLPVFIKIL 276
Q G+AG +I A L +G SH+VLVVYR+V A I +APFA + ERK RPKM+ F +I
Sbjct: 766 QVGYAGTNIIVKACLNKGFSHFVLVVYRHVAATIALAPFAFFIERKERPKMTFFTFCQIF 587
Query: 277 ALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIXXRRSQAXX 456
LG L PVLDQN Y+G+ TS +++ AL+N+LPA+TFV A+I RMER+ I RSQA
Sbjct: 586 VLGSLGPVLDQNLYYIGLKLTSPTYACALSNLLPAMTFVMALIFRMERVNIKKLRSQAKI 407
Query: 457 XGTAXTVXXXLLMILXXXXIIXXXXSXH 540
GT V +LM + I+ S H
Sbjct: 406 VGTIVCVGGAMLMTMYNGPIVKMPWSAH 323
>gb|DR078785.1|DR078785 RTFEPL1_6_G09.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_6_G09_A029 5', mRNA sequence
Length = 764
Score = 90.9 bits (192), Expect(2) = 1e-035
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = +1 / +3
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFER 231
K PY+AM+FLQFG+AGM +IS +L +GM+H+VLVVYR VA +V+APFA +FER
Sbjct: 39 KGKPYVAMIFLQFGYAGMVIISKVALNRGMNHFVLVVYRQTVATVVLAPFAFFFER 206
Score = 80.3 bits (169), Expect(2) = 1e-035
Identities = 37/82 (45%), Positives = 48/82 (58%)
Frame = +1 / +1
Query: 295 PVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIXXRRSQAXXXGTAXT 474
PV+DQNF Y+G+ TS F+ L N+LPA+TFV A++ RME + I RSQA GT
Sbjct: 367 PVMDQNFYYLGLKLTSPIFAVTLINVLPAMTFVMALLFRMESLNIKKLRSQAKIVGTIVC 546
Query: 475 VXXXLLMILXXXXIIXXXXSXH 540
V +LM L I+ S H
Sbjct: 547 VGGAMLMTLYKGPILQMHWSLH 612
>gb|BQ697505.1|BQ697505 NXPV_054_B12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_054_B12 5' similar to Arabidopsis
thaliana sequence At5g07050 MtN21 nodulin protein-like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 484
Score = 145 bits (311), Expect = 2e-034
Identities = 61/109 (55%), Positives = 78/109 (71%)
Frame = +1 / +1
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +IS SL GM+H+VLVVYR+ VA IV+APFA + ERK RPK++
Sbjct: 148 PYVAMISLQFGYAGMNIISKVSLSGGMNHFVLVVYRHAVATIVLAPFAFFVERKVRPKIT 327
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNA 399
+F +I ALGL PVL NF Y+G T ++S AL N P +TFV A
Sbjct: 328 FSIFCQIFALGLXXPVLHXNFYYLGPKLTXXTYSCALNNXXPTMTFVIA 474
>gb|DR110236.1|DR110236 RTS1_9_E09.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_9_E09_A029 5', mRNA sequence
Length = 918
Score = 138 bits (295), Expect = 4e-032
Identities = 58/152 (38%), Positives = 92/152 (60%)
Frame = +1 / +1
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K P++A V +Q +AGM +++ +L GM+H+V V YR ++A + +AP A ERK RP
Sbjct: 58 KFKPHLAQVAVQIAYAGMNVLTKLALADGMNHFVFVTYRQIIATLAIAPLAYVLERKQRP 237
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
M+L +F +I L L ++QNF + G+N T+++F++A TN++P +TFV A +LR E +
Sbjct: 238 PMTLSIFFQIFLLALGGIAINQNFYFAGLNYTNSTFAAATTNLIPVVTFVMATVLRYENV 417
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMILXXXXII 519
I R A GT V ++M L +I
Sbjct: 418 NIRSLRGLAKVVGTIVCVGGAMVMTLYKGSVI 513
>gb|CF398243.1|CF398243 RTDS3_24_B05.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_24_B05_A022 3', mRNA sequence
Length = 688
Score = 136 bits (292), Expect = 1e-031
Identities = 53/91 (58%), Positives = 73/91 (80%)
Frame = +1 / +1
Query: 139 LRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFI 318
L +GM+H+VLVVYR+ A +V+APFA + ERK RPK++ P+F +I LGLL PV+DQNF
Sbjct: 1 LNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGPVIDQNFY 180
Query: 319 YMGVNSTSASFSSALTNILPALTFVNAIILR 411
YMG+ TS +++SAL+N+LPA+TFV A+I R
Sbjct: 181 YMGLKLTSPTYASALSNLLPAMTFVMALIFR 273
>gb|CF399047.1|CF399047 RTDS3_9_G06.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_9_G06_A022 3', mRNA sequence
Length = 688
Score = 136 bits (292), Expect = 1e-031
Identities = 53/91 (58%), Positives = 73/91 (80%)
Frame = +1 / +1
Query: 139 LRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFI 318
L +GM+H+VLVVYR+ A +V+APFA + ERK RPK++ P+F +I LGLL PV+DQNF
Sbjct: 1 LNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGPVIDQNFY 180
Query: 319 YMGVNSTSASFSSALTNILPALTFVNAIILR 411
YMG+ TS +++SAL+N+LPA+TFV A+I R
Sbjct: 181 YMGLKLTSPTYASALSNLLPAMTFVMALIFR 273
>gb|DR384820.1|DR384820 RTHG1_4_F11.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_F11_A029 5', mRNA sequence
Length = 690
Score = 134 bits (288), Expect = 4e-031
Identities = 58/117 (49%), Positives = 78/117 (66%)
Frame = +1 / +3
Query: 190 AAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTN 369
A +V+APFA + ERK RPK++ P+F +I LGLL PV+DQNF Y+G+ TS +++ AL+N
Sbjct: 9 ATVVLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGPVIDQNFYYLGLKLTSPTYACALSN 188
Query: 370 ILPALTFVNAIILRMERIVIXXRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXSXH 540
+LPA+TFV A+I RMER+ I RSQA GT V +LM L I+ S H
Sbjct: 189 VLPAMTFVMALIFRMERVNIKNLRSQAKIVGTIVCVGGAMLMTLYKGPIVPMLWSPH 359
>gb|CF399147.1|CF399147 RTDS3_9_G06.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_9_G06_A022 5', mRNA sequence
Length = 678
Score = 134 bits (287), Expect = 5e-031
Identities = 52/88 (59%), Positives = 71/88 (80%)
Frame = +1 / +1
Query: 148 GMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMG 327
GM+H+VLVVYR+ A +V+APFA + ERK RPK++ P+F +I LGLL PV+DQNF YMG
Sbjct: 1 GMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGPVIDQNFYYMG 180
Query: 328 VNSTSASFSSALTNILPALTFVNAIILR 411
+ TS +++SAL+N+LPA+TFV A+I R
Sbjct: 181 LKLTSPTYASALSNLLPAMTFVMALIFR 264
>gb|CO171061.1|CO171061 NDL1_18_F06.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_18_F06_A029 5', mRNA sequence
Length = 824
Score = 127 bits (273), Expect = 4e-029
Identities = 55/154 (35%), Positives = 90/154 (58%)
Frame = +1 / +2
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
P++A + +Q +AGM +++ +L GM+H++ V YR VA++V++PFA + ER RP M+
Sbjct: 71 PHIAQLMVQVCYAGMNILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLERSERPAMT 250
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
VF +I L + ++QN + G+ TS++F+SA TN++P +TFV A RME + I
Sbjct: 251 CAVFWEIFTLAFVGITMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNIR 430
Query: 433 XRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXS 534
QA GT V ++M L ++ S
Sbjct: 431 SIYGQAKVVGTLVCVGGAMVMTLYKGPVLLKAVS 532
>gb|DR078570.1|DR078570 RTFEPL1_5_C05.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_5_C05_A029 5', mRNA sequence
Length = 788
Score = 127 bits (273), Expect = 4e-029
Identities = 55/101 (54%), Positives = 72/101 (71%)
Frame = +1 / +3
Query: 199 VMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILP 378
V+APFA + ERK RPK++ +F +I ALGLL PVLDQNF Y+G+ TS ++S AL+N+LP
Sbjct: 3 VLAPFAFFVERKVRPKITFSIFCQIFALGLLGPVLDQNFYYLGLKLTSPTYSCALSNVLP 182
Query: 379 ALTFVNAIILRMERIVIXXRRSQAXXXGTAXTVXXXLLMIL 501
A+TFV A++ RMER+ I RSQA GT V +LM L
Sbjct: 183 AMTFVIALVFRMERVNIKQVRSQAKILGTIVCVGGAMLMTL 305
>gb|DR092668.1|DR092668 STRR1_2_H07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_2_H07_A033 5', mRNA sequence
Length = 868
Score = 127 bits (273), Expect = 4e-029
Identities = 55/154 (35%), Positives = 90/154 (58%)
Frame = +1 / +1
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
P++A + +Q +AGM +++ +L GM+H++ V YR VA++V++PFA + ER RP M+
Sbjct: 133 PHIAQLMVQVCYAGMNILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLERSERPAMT 312
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
VF +I L + ++QN + G+ TS++F+SA TN++P +TFV A RME + I
Sbjct: 313 CAVFWEIFTLAFVGITMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNIR 492
Query: 433 XRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXS 534
QA GT V ++M L ++ S
Sbjct: 493 SIYGQAKVVGTLVCVGGAMVMTLYKGPVLLKAVS 594
>gb|DR682638.1|DR682638 EST1072713 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAB20 3' end, mRNA sequence
Length = 767
Score = 127 bits (272), Expect = 6e-029
Identities = 55/154 (35%), Positives = 90/154 (58%)
Frame = +1 / +2
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
P++A + +Q +AGM +++ +L GM+H++ V YR VA++V++PFA + ER RP M+
Sbjct: 224 PHIAQLMVQVCYAGMNILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLERSERPVMT 403
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
VF +I L + ++QN + G+ TS++F+SA TN++P +TFV A RME + I
Sbjct: 404 CAVFWEIFTLAFVGITMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNIR 583
Query: 433 XRRSQAXXXGTAXTVXXXLLMILXXXXIIXXXXS 534
QA GT V ++M L ++ S
Sbjct: 584 SIYGQAKVVGTLVCVGGAMVMTLYKGPVLLKAVS 685
>gb|BQ696700.1|BQ696700 NXPV_044_D04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_044_D04 5' similar to Arabidopsis
thaliana sequence At5g07050 MtN21 nodulin protein-like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 434
Score = 126 bits (270), Expect = 1e-028
Identities = 54/97 (55%), Positives = 70/97 (72%)
Frame = +1 / +2
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +IS SL GM+H+VLVVY VA IV+APFA + ERK RPK++
Sbjct: 143 PYVAMISLQFGYAGMNIISKVSLSGGMNHFVLVVYXXAVATIVLAPFAFFVERKVRPKIT 322
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSAL 363
+F +I ALGL VLD N Y+G+ TS ++S AL
Sbjct: 323 FXIFCQIFALGLXXXVLDXNXXYLGLKLTSPTYSCAL 433
>gb|DR112232.1|DR112232 RTS1_26_F04.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_26_F04_A029 5', mRNA sequence
Length = 488
Score = 109 bits (233), Expect(2) = 2e-028
Identities = 42/73 (57%), Positives = 58/73 (79%)
Frame = +1 / +2
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
PY+AM+ LQFG+AGM +I+ SL +GM+H+VLVVYR+ A +V+APFA + ERK RPK++
Sbjct: 107 PYVAMISLQFGYAGMNIITKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRPKLT 286
Query: 253 LPVFIKILALGLL 291
P+F +I LGLL
Sbjct: 287 FPIFWQIFVLGLL 325
Score = 35.4 bits (71), Expect(2) = 2e-028
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 308 KTSSTWE*IAHQQASPLR*PTYCQL*LL*MPSYSGWRG* 424
K S+TW * H Q + * + L*L * SYSGWRG*
Sbjct: 341 KISTTWV*N*HLQHMHVH*VMFSPL*LS*WLSYSGWRG* 457
>gb|DR025171.1|DR025171 STRS1_70_C04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_70_C04_A034 3', mRNA sequence
Length = 625
Score = 124 bits (266), Expect = 4e-028
Identities = 53/143 (37%), Positives = 86/143 (60%)
Frame = +1 / -1
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
P +A + +Q +AGM +++ +L GM+H++ V YR VA++V++PFA + +R RP M+
Sbjct: 451 PRIAQLMVQVCYAGMNILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLQRSERPAMT 272
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
VF +I L + ++QN + G+ TS++F+SA TN++P +TFV A RME + I
Sbjct: 271 CAVFWEIFTLAFVGITMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNIT 92
Query: 433 XRRSQAXXXGTAXTVXXXLLMIL 501
QA GT V ++M L
Sbjct: 91 SIYGQAKVVGTLVCVGGAMVMTL 23
>gb|DR079014.1|DR079014 RTFEPL1_8_A01.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_8_A01_A029 5', mRNA sequence
Length = 409
Score = 122 bits (262), Expect = 1e-027
Identities = 51/101 (50%), Positives = 71/101 (70%)
Frame = +1 / +3
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K PY+AM+ LQFG M +IS SL +GMSH+VLVVYR VA + + P+ + ERK RP
Sbjct: 105 KSTPYVAMISLQFGSPWMNIISKVSLNRGMSHFVLVVYRQAVATVFLFPWGDFLERKMRP 284
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALT 366
K++ +F +I LGLL PV+DQNF Y+G+ TS +++ AL+
Sbjct: 285 KLTFSIFCQIFVLGLLGPVIDQNFSYLGLKLTSPTYACALS 407
>gb|DT631215.1|DT631215 EST1146146 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF628 3' end, mRNA sequence
Length = 610
Score = 122 bits (261), Expect = 2e-027
Identities = 51/131 (38%), Positives = 82/131 (62%)
Frame = +1 / +1
Query: 73 PYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMS 252
P++A + +Q +AGM +++ +L GM+H++ V YR VA++V++PFA + ER RP M+
Sbjct: 211 PHIAQLMVQVCYAGMNILTRLALEDGMNHFIFVCYRQAVASLVLSPFAYFLERSERPVMT 390
Query: 253 LPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIX 432
VF +I L + ++QN + G+ TS++F+SA TN++P +TFV A RME + I
Sbjct: 391 CAVFWEIFTLAFVGITMNQNLYFAGLQYTSSTFASATTNLIPVVTFVLATTFRMEHVNIR 570
Query: 433 XRRSQAXXXGT 465
QA GT
Sbjct: 571 SIYGQAKVVGT 603
>gb|CF398276.1|CF398276 RTDS3_24_B05.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_24_B05_A022 5', mRNA sequence
Length = 661
Score = 122 bits (260), Expect = 3e-027
Identities = 48/82 (58%), Positives = 65/82 (79%)
Frame = +1 / +2
Query: 166 LVVYRNVVAAIVMAPFALWFERKTRPKMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSA 345
LVVYR+ A +V+APFA + ERK RPK++ P+F +I LGLL PV+DQNF YMG+ TS
Sbjct: 2 LVVYRHAAATVVLAPFAFFIERKVRPKLTFPIFWQIFVLGLLGPVIDQNFYYMGLKLTSP 181
Query: 346 SFSSALTNILPALTFVNAIILR 411
+++SAL+N+LPA+TFV A+I R
Sbjct: 182 TYASALSNLLPAMTFVMALIFR 247
>gb|AW010686.1|AW010686 ST11A02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST11A02, mRNA sequence
Length = 486
Score = 55.1 bits (114), Expect(4) = 8e-026
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1 / +2
Query: 172 VYRNVVAAIVMAPFALWFERKTRPKMSLPVFIKILALG 285
VYR+ VA VMAPFA + ERK RPK++ +F +I ALG
Sbjct: 275 VYRHAVATAVMAPFAFFVERKVRPKITFSIFCQIFALG 388
Score = 50.6 bits (104), Expect(4) = 8e-026
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +1 / +3
Query: 283 GLLEPVLDQNFIYMGVNSTSASFSSALTNILPA 381
GLL PV+DQNF Y G+ TS +F+ A++N+LPA
Sbjct: 387 GLLGPVIDQNFYYAGLKYTSPTFACAMSNVLPA 485
Score = 39.6 bits (80), Expect(4) = 8e-026
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1 / +2
Query: 31 SDRMELAGTWRKVMPYMAMVFLQFGFAGMFLIS 129
S R L+ + K PY+AM+ LQFG+AGM +I+
Sbjct: 134 SRRSRLSRVFEKSKPYIAMISLQFGYAGMNIIT 232
Score = 25.8 bits (50), Expect(4) = 8e-026
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 133 ASLRQGMSHYVLV 171
+SL GMSHYVLV
Sbjct: 235 SSLTNGMSHYVLV 273
>gb|CF477126.1|CF477126 RTWW3_5_G08.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_5_G08_A022 5', mRNA sequence
Length = 735
Score = 114 bits (244), Expect = 4e-025
Identities = 50/146 (34%), Positives = 85/146 (58%)
Frame = +1 / +1
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
+V ++AM+ LQFG+AG ++S A+L G+S V +YRN++A +++ P A + E+K RP
Sbjct: 130 RVKLHVAMLALQFGYAGFHIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERP 309
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++L ++ L L +Q F +G+ T+ +F+SA+ N +PA+TF+ A IL +E +
Sbjct: 310 PLTLSFLVQFFLLALCGITANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEV 489
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMIL 501
I A GT V ++ L
Sbjct: 490 HIRRLDGLAKIVGTVACVGGATIITL 567
>gb|DR079462.1|DR079462 RTFEPL1_11_A03.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_11_A03_A029 5', mRNA sequence
Length = 843
Score = 114 bits (244), Expect = 4e-025
Identities = 50/146 (34%), Positives = 85/146 (58%)
Frame = +1 / +3
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
+V ++AM+ LQFG+AG ++S A+L G+S V +YRN++A +++ P A + E+K RP
Sbjct: 108 RVKLHVAMLALQFGYAGFHIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERP 287
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++L ++ L L +Q F +G+ T+ +F+SA+ N +PA+TF+ A IL +E +
Sbjct: 288 PLTLSFLVQFFLLALCGITANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEV 467
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMIL 501
I A GT V ++ L
Sbjct: 468 HIRRLDGLAKIVGTVACVGGATIITL 545
>gb|DR094118.1|DR094118 STRR1_12_C07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_C07_A033 5', mRNA sequence
Length = 838
Score = 114 bits (244), Expect = 4e-025
Identities = 50/146 (34%), Positives = 85/146 (58%)
Frame = +1 / +3
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
+V ++AM+ LQFG+AG ++S A+L G+S V +YRN++A +++ P A + E+K RP
Sbjct: 129 RVKLHVAMLALQFGYAGFHIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERP 308
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++L ++ L L +Q F +G+ T+ +F+SA+ N +PA+TF+ A IL +E +
Sbjct: 309 PLTLSFLVQFFLLALCGITANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEV 488
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMIL 501
I A GT V ++ L
Sbjct: 489 HIRRLDGLAKIVGTVACVGGATIITL 566
>gb|BX254061.1|BX254061 BX254061 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092G08, mRNA sequence
Length = 682
Score = 113 bits (242), Expect = 8e-025
Identities = 50/146 (34%), Positives = 84/146 (57%)
Frame = +1 / +2
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
+V + AM+ LQFG+AG ++S A+L G+S V +YRN++A +++ P A + E+K RP
Sbjct: 152 RVKLHAAMLALQFGYAGFHIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERP 331
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++L ++ L L +Q F +G+ T+ +F+SA+ N +PA+TF+ A IL +E +
Sbjct: 332 PLTLSFLVQFFLLALCGITANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEV 511
Query: 424 VIXXRRSQAXXXGTAXTVXXXLLMIL 501
I A GT V ++ L
Sbjct: 512 HIRRLDGLAKIVGTVACVGGATIITL 589
>gb|BX254250.1|BX254250 BX254250 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP095F03, mRNA sequence
Length = 577
Score = 112 bits (239), Expect = 2e-024
Identities = 49/138 (35%), Positives = 81/138 (58%)
Frame = +1 / +1
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
+V + AM+ LQFG+AG ++S A+L G+S V +YRN++A +++ P A + E+K RP
Sbjct: 154 RVKLHAAMLALQFGYAGFHIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERP 333
Query: 244 KMSLPVFIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERI 423
++L ++ L L +Q F +G+ T+ +F+SA+ N +PA+TF+ A IL +E +
Sbjct: 334 PLTLSFLVQFFLLALCGITANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEV 513
Query: 424 VIXXRRSQAXXXGTAXTV 477
I A GT V
Sbjct: 514 HIRRLDGLAKIVGTVACV 567
>gb|CF390060.1|CF390060 RTDR2_12_A06.b1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_12_A06_A021 3', mRNA
sequence
Length = 668
Score = 112 bits (239), Expect = 2e-024
Identities = 49/140 (35%), Positives = 81/140 (57%)
Frame = +1 / -2
Query: 82 AMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRPKMSLPV 261
AM+ LQFG+AG ++S A+L G+S V +YRN++A +++ P A + E+K RP ++L
Sbjct: 667 AMLALQFGYAGFHIVSRAALNMGISKIVFPIYRNIIALLLLGPAAYFLEKKERPPLTLSF 488
Query: 262 FIKILALGLLEPVLDQNFIYMGVNSTSASFSSALTNILPALTFVNAIILRMERIVIXXRR 441
++ L L +Q F +G+ T+ +F+SA+ N +PA+TF+ A IL +E + I
Sbjct: 487 LVQFFLLALCGITANQGFYLLGLYYTTPTFASAIQNSVPAITFIMAAILGLEEVHIRRLD 308
Query: 442 SQAXXXGTAXTVXXXLLMIL 501
A GT V ++ L
Sbjct: 307 GLAKIVGTVACVGGATIITL 248
>gb|DR111727.1|DR111727 RTS1_19_G06.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_19_G06_A029 5', mRNA sequence
Length = 331
Score = 106 bits (227), Expect = 9e-023
Identities = 41/74 (55%), Positives = 57/74 (77%)
Frame = +1 / +1
Query: 64 KVMPYMAMVFLQFGFAGMFLISVASLRQGMSHYVLVVYRNVVAAIVMAPFALWFERKTRP 243
K PY+AM+ LQFG+AGM +IS SL +GM+H+VLVVYR+ A +V+APFA + ERK RP
Sbjct: 109 KSKPYVAMISLQFGYAGMNIISKVSLNRGMNHFVLVVYRHAAATVVLAPFAFFIERKVRP 288
Query: 244 KMSLPVFIKILALG 285
K++ +F++I LG
Sbjct: 289 KLTFSIFLQIFVLG 330
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 274,759,714
Number of Sequences: 355925
Number of extensions: 3867125
Number of successful extensions: 55983
Number of sequences better than 1.0e-020: 60
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 7001290530
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)