TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAR1e04.yg.2.1
(405 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO366300.1|CO366300 RTK1_27_B12.b1_A029 Roots minus pota... 186 8e-047
gb|CX651998.1|CX651998 COLD1_56_E11.b1_A029 Root cold Pinus... 186 8e-047
gb|CX652066.1|CX652066 COLD1_56_E11.g1_A029 Root cold Pinus... 186 8e-047
gb|DR060986.1|DR060986 RTNIT1_31_G11.b1_A029 Roots minus ni... 186 8e-047
gb|DR116909.1|DR116909 RTMG1_3_C03.g1_A029 Roots minus magn... 186 8e-047
gb|DR079949.1|DR079949 RTFEPL1_19_A07.b1_A029 Roots plus ad... 183 6e-046
gb|DR023255.1|DR023255 STRS1_56_A07.g1_A034 Shoot tip pitch... 182 1e-045
gb|DR099105.1|DR099105 STRR1_53_D12.b1_A033 Stem Response R... 182 1e-045
gb|DR100018.1|DR100018 STRR1_61_B02.b1_A033 Stem Response R... 182 1e-045
gb|DR080004.1|DR080004 RTFEPL1_19_A07.g1_A029 Roots plus ad... 179 1e-044
gb|DR102424.1|DR102424 STRR1_81_B02.b1_A033 Stem Response R... 179 1e-044
gb|DR024283.1|DR024283 STRS1_63_G03.g1_A034 Shoot tip pitch... 178 2e-044
gb|BX250000.1|BX250000 BX250000 Pinus pinaster differenciat... 177 3e-044
gb|CX647335.1|CX647335 COLD1_15_H08.b1_A029 Root cold Pinus... 177 3e-044
gb|DR178921.1|DR178921 RTMNUT1_14_G02.g1_A029 Roots minus m... 177 3e-044
gb|AF132120.1|AF132120 Pinus taeda laccase (Lac2) mRNA, com... 177 3e-044
dbj|BD224536.1| Materials and methods for the modification ... 177 3e-044
gb|AW290117.1|AW290117 NXNV010D09F Nsf Xylem Normal wood Ve... 177 3e-044
gb|BQ702308.1|BQ702308 NXSI_127_C02_F NXSI (Nsf Xylem Side ... 177 3e-044
gb|CD026741.1|CD026741 NXNV010D09 Nsf Xylem Normal wood Ver... 177 3e-044
gb|AW289657.1|AW289657 NXNV003D03F Nsf Xylem Normal wood Ve... 177 5e-044
gb|CD028198.1|CD028198 NXNV003D03 Nsf Xylem Normal wood Ver... 177 5e-044
gb|BX682255.2|BX682255 BX682255 Pinus pinaster differenciat... 175 1e-043
gb|AF132122.1|AF132122 Pinus taeda laccase (Lac4) mRNA, com... 175 2e-043
gb|BX249680.1|BX249680 BX249680 Pinus pinaster differenciat... 174 2e-043
gb|CF474140.1|CF474140 RTWW2_17_D03.b1_A021 Well-watered lo... 174 2e-043
gb|BX250739.1|BX250739 BX250739 Pinus pinaster differenciat... 173 4e-043
gb|BQ700010.1|BQ700010 NXRV133_A09_F NXRV (Nsf Xylem Root w... 173 4e-043
gb|CD028514.1|CD028514 NXSI_119_H02_F NXSI (Nsf Xylem Side ... 173 4e-043
gb|CX646584.1|CX646584 COLD1_10_F02.b1_A029 Root cold Pinus... 173 6e-043
gb|CF473790.1|CF473790 RTWW2_4_G02.g1_A021 Well-watered lob... 172 1e-042
gb|DR178837.1|DR178837 RTMNUT1_14_G02.b1_A029 Roots minus m... 172 1e-042
gb|CF398272.1|CF398272 RTDS3_24_F12.g1_A022 Drought-stresse... 171 2e-042
dbj|BD224537.1| Materials and methods for the modification ... 171 2e-042
gb|DR166052.1|DR166052 RTPHOS1_9_B07.b2_A029 Roots minus ph... 170 4e-042
gb|BF516721.1|BF516721 NXSI_002_E10_F NXSI (Nsf Xylem Side ... 170 6e-042
gb|CF478305.1|CF478305 RTWW3_18_E06.b1_A022 Well-watered lo... 166 7e-041
gb|AF132126.1|AF132126 Pinus taeda laccase (Lac8) mRNA, com... 166 7e-041
gb|CO362368.1|CO362368 RTK1_3_D05.b1_A029 Roots minus potas... 165 1e-040
gb|CV035707.1|CV035707 RTNACL1_41_H12.g1_A029 Roots plus ad... 165 1e-040
gb|BF169952.1|BF169952 NXCI_122_H06_F NXCI (Nsf Xylem Compr... 165 1e-040
gb|BI202922.1|BI202922 NXPV_092_E06_F NXPV (Nsf Xylem Plani... 164 3e-040
gb|CF398883.1|CF398883 RTDS3_11_G12.b1_A022 Drought-stresse... 164 3e-040
gb|CO200210.1|CO200210 GEO2_6_C07.b1_A032 Root gravitropism... 164 3e-040
gb|DR089078.1|DR089078 RTAL1_6_A01.g1_A029 Roots plus added... 164 3e-040
gb|CF474525.1|CF474525 RTWW2_9_H03.b1_A021 Well-watered lob... 162 9e-040
gb|AF132125.1|AF132125 Pinus taeda laccase (Lac7) mRNA, com... 162 9e-040
gb|DR012672.1|DR012672 HEAT1_14_G05.b1_A029 Root at 37 C fo... 158 2e-038
gb|DR384963.1|DR384963 RTHG1_5_F06.g1_A029 Roots plus added... 158 2e-038
gb|BQ701805.1|BQ701805 NXSI_120_G05_F NXSI (Nsf Xylem Side ... 157 4e-038
gb|CO200292.1|CO200292 GEO2_6_C07.g1_A032 Root gravitropism... 157 4e-038
gb|CF474922.1|CF474922 RTWW2_8_G02.g1_A021 Well-watered lob... 156 8e-038
gb|CR393471.1|CR393471 CR393471 RN Pinus pinaster cDNA clon... 156 8e-038
gb|CR394206.1|CR394206 CR394206 RN Pinus pinaster cDNA clon... 156 8e-038
gb|BF777637.1|BF777637 NXSI_070_G12_F NXSI (Nsf Xylem Side ... 155 1e-037
gb|CF671511.1|CF671511 RTCNT1_57_C11.g1_A029 Root control P... 155 1e-037
gb|CO361823.1|CO361823 NDL2_7_G07.b1_A029 Needles control 2... 155 2e-037
gb|DR070142.1|DR070142 RTDK1_11_C01.g1_A029 Roots, dark Pin... 154 4e-037
gb|DR071515.1|DR071515 RTDK1_20_H07.b1_A029 Roots, dark Pin... 152 1e-036
gb|DR178232.1|DR178232 RTMNUT1_10_F05.b1_A029 Roots minus m... 152 1e-036
gb|DR742974.1|DR742974 RTCU1_8_E04.g2_A029 Roots plus added... 152 1e-036
gb|CF477652.1|CF477652 RTWW3_9_B07.b1_A022 Well-watered lob... 152 1e-036
gb|AF132121.1|AF132121 Pinus taeda laccase (Lac3) mRNA, com... 152 1e-036
gb|AW289555.1|AW289555 NXNV002H11F Nsf Xylem Normal wood Ve... 150 5e-036
gb|CD028178.1|CD028178 NXNV002H11 Nsf Xylem Normal wood Ver... 150 5e-036
gb|DR014195.1|DR014195 HEAT1_24_A10.b1_A029 Root at 37 C fo... 148 2e-035
gb|DR014270.1|DR014270 HEAT1_24_A10.g1_A029 Root at 37 C fo... 148 2e-035
gb|AF132119.1|AF132119 Pinus taeda laccase (Lac1) mRNA, com... 148 2e-035
gb|BX250308.1|BX250308 BX250308 Pinus pinaster differenciat... 147 3e-035
gb|CX713944.1|CX713944 RTPQ1_15_G09.b1_A032 Roots treated w... 147 3e-035
gb|CX713973.1|CX713973 RTPQ1_15_G09.g1_A032 Roots treated w... 147 3e-035
gb|BQ702500.1|BQ702500 NXSI_129_D01_F NXSI (Nsf Xylem Side ... 147 4e-035
gb|BX251790.1|BX251790 BX251790 Pinus pinaster differenciat... 146 6e-035
gb|BX253281.1|BX253281 BX253281 Pinus pinaster differenciat... 146 6e-035
gb|BX253355.1|BX253355 BX253355 Pinus pinaster differenciat... 146 6e-035
gb|CF398957.1|CF398957 RTDS3_11_G12.g1_A022 Drought-stresse... 146 6e-035
gb|DR069303.1|DR069303 RTDK1_6_G04.b1_A029 Roots, dark Pinu... 146 6e-035
gb|DR096343.1|DR096343 STRR1_27_H07.b1_A033 Stem Response R... 146 6e-035
gb|DR096428.1|DR096428 STRR1_27_H07.g1_A033 Stem Response R... 146 6e-035
gb|DR096502.1|DR096502 STRR1_28_H07.b1_A033 Stem Response R... 146 6e-035
gb|DR096587.1|DR096587 STRR1_28_H07.g1_A033 Stem Response R... 146 6e-035
gb|AF132123.1|AF132123 Pinus taeda laccase (Lac5) mRNA, com... 146 6e-035
gb|CR354657.1|CR354657 CR354657 Pinus pinaster differenciat... 145 2e-034
gb|BE496367.1|BE496367 NXCI_017_A06_F NXCI (Nsf Xylem Compr... 144 2e-034
gb|AF132124.1|AF132124 Pinus taeda laccase (Lac6) mRNA, com... 144 3e-034
gb|BE758649.1|BE758649 NXCI_069_F01_F NXCI (Nsf Xylem Compr... 143 8e-034
gb|BQ634755.1|BQ634755 NXRV072_H03_F NXRV (Nsf Xylem Root w... 143 8e-034
gb|CO198641.1|CO198641 GEO1_15_G11.b1_A029 Root gravitropis... 143 8e-034
gb|DR069309.1|DR069309 RTDK1_6_H04.b1_A029 Roots, dark Pinu... 142 1e-033
gb|AW626664.1|AW626664 NXNV068B04 Nsf Xylem Normal wood Ver... 141 2e-033
gb|DR019426.1|DR019426 STRS1_30_A03.b1_A034 Shoot tip pitch... 141 3e-033
gb|BX254102.1|BX254102 BX254102 Pinus pinaster differenciat... 141 3e-033
gb|BE458054.1|BE458054 NXCI_005_C10_F NXCI (Nsf Xylem Compr... 141 3e-033
gb|DR071593.1|DR071593 RTDK1_20_H07.g1_A029 Roots, dark Pin... 140 4e-033
dbj|BD224358.1| Materials and methods for the modification ... 139 7e-033
dbj|BD224418.1| Materials and methods for the modification ... 138 3e-032
gb|BF010770.1|BF010770 NXCI_068_D11_F NXCI (Nsf Xylem Compr... 136 6e-032
dbj|BD224538.1| Materials and methods for the modification ... 136 6e-032
gb|BQ107883.1|BQ107883 NXLV101_H12_F NXLV (Nsf Xylem Late w... 135 2e-031
gb|BM367322.1|BM367322 NXLV_047_F10_F NXLV (Nsf Xylem Late ... 134 2e-031
gb|BX252529.1|BX252529 BX252529 Pinus pinaster differenciat... 132 1e-030
gb|DR387570.1|DR387570 RTHG1_22_E12.g2_A029 Roots plus adde... 131 3e-030
gb|CO158627.1|CO158627 FLD1_8_D07.b1_A029 Root flooded Pinu... 130 4e-030
gb|BF220791.1|BF220791 NXCI_150_H07_F NXCI (Nsf Xylem Compr... 130 6e-030
gb|BG275920.1|BG275920 NXSI_149_E10_F NXSI (Nsf Xylem Side ... 130 6e-030
gb|BE758635.1|BE758635 NXCI_069_D05_F NXCI (Nsf Xylem Compr... 128 1e-029
gb|AI725182.1|AI725182 1081 PtIFG2 Pinus taeda cDNA clone 9... 128 2e-029
gb|AI920039.1|AI920039 1569 Pine Lambda Zap Xylem library P... 88 4e-029
gb|BQ633762.1|BQ633762 NXRV060_D11_F NXRV (Nsf Xylem Root w... 127 5e-029
gb|AI812943.1|AI812943 22G11 Pine Lambda Zap Xylem library ... 126 1e-028
gb|AW626589.1|AW626589 NXNV067B05 Nsf Xylem Normal wood Ver... 83 2e-028
gb|BF517037.1|BF517037 NXSI_008_D10_F NXSI (Nsf Xylem Side ... 124 3e-028
gb|CO170045.1|CO170045 NDL1_11_G10.b1_A029 Needles control ... 123 5e-028
gb|BQ698187.1|BQ698187 NXPV_067_E05_F NXPV (Nsf Xylem Plani... 120 4e-027
gb|BF610385.1|BF610385 NXSI_049_H12_F NXSI (Nsf Xylem Side ... 119 1e-026
gb|BM428608.1|BM428608 NXRV_019_C04_F NXRV (Nsf Xylem Root ... 119 1e-026
gb|CF669991.1|CF669991 RTCNT1_47_H12.b1_A029 Root control P... 118 2e-026
gb|DR048956.1|DR048956 RTBOR1_12_G09.b1_A029 Roots plus add... 118 2e-026
gb|CF478753.1|CF478753 RTWW3_15_A09.b1_A022 Well-watered lo... 118 2e-026
gb|BQ699385.1|BQ699385 NXRV127_B08_F NXRV (Nsf Xylem Root w... 117 3e-026
gb|AI920136.1|AI920136 1666 Pine Lambda Zap Xylem library P... 69 3e-025
gb|BF610261.1|BF610261 NXSI_057_B03_F NXSI (Nsf Xylem Side ... 114 4e-025
gb|BQ702927.1|BQ702927 NXSI_134_C10_F NXSI (Nsf Xylem Side ... 114 4e-025
gb|CF667349.1|CF667349 RTCNT1_29_D09.g1_A029 Root control P... 111 3e-024
gb|BE187346.1|BE187346 NXNV_162_G09_F Nsf Xylem Normal wood... 108 2e-023
gb|BM427908.1|BM427908 NXRV_006_B02_F NXRV (Nsf Xylem Root ... 108 2e-023
gb|AW869960.1|AW869960 NXNV_120_D07_F Nsf Xylem Normal wood... 107 4e-023
gb|AW985448.1|AW985448 NXNV_136_F10_F Nsf Xylem Normal wood... 104 3e-022
gb|BX679752.1|BX679752 BX679752 RS Pinus pinaster cDNA clon... 91 2e-021
gb|CF473814.1|CF473814 RTWW2_19_B04.b1_A021 Well-watered lo... 100 4e-021
>gb|CO366300.1|CO366300 RTK1_27_B12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_B12_A029 3', mRNA sequence
Length = 803
Score = 186 bits (400), Expect = 8e-047
Identities = 72/102 (70%), Positives = 80/102 (78%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+ EGFGNFD D +FN+ DPP RNTVGVPVNGW+ IRFVA+NPG
Sbjct: 275 NHPIHLHGYDFYIVGEGFGNFDPQRDPLTFNLIDPPQRNTVGVPVNGWSAIRFVANNPGV 454
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLAMAF VE+G + LEA D +C*
Sbjct: 455 WLMHCHLDVHITWGLAMAFAVENGPHHLARLEAPPLDLPLC* 580
Score = 110 bits (234), Expect = 7e-024
Identities = 48/82 (58%), Positives = 53/82 (64%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P ST AMA P V+CTSRWQC+S PGL AT + P TGTPTV GGS L + S
Sbjct: 525 PFSTAKAMASPHVICTSRWQCISQTPGLLATNLIADHPFTGTPTVLRCGGSMRLNVRGSR 346
Query: 71 XASKLPKPSARM*KS*PWRWMG 6
SK PKPS M*KS*PWR +G
Sbjct: 345 CGSKFPKPSPTM*KS*PWR*IG 280
>gb|CX651998.1|CX651998 COLD1_56_E11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_E11_A029 3', mRNA sequence
Length = 689
Score = 186 bits (400), Expect = 8e-047
Identities = 72/114 (63%), Positives = 83/114 (72%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+ EGFGN++ D +FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 398 NHPIHLHGYDFYIVGEGFGNYNPRTDPQTFNLVDPPMRNTVAVPVNGWAAIRFVADNPGA 219
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHRGXXLI 342
LMHCHLDVHITWGLAM FLVE+G M ++E D +C* H ++
Sbjct: 218 WLMHCHLDVHITWGLAMVFLVENGPTYMTTIETPPPDLPVC*KTWPQHNSIIML 57
Score = 117 bits (251), Expect = 3e-026
Identities = 52/83 (62%), Positives = 59/83 (71%)
Frame = -2 / +1
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P STR MA+PQVMCTS+ QC++ PGLSAT M A PLTGT TV MGGS+ LK+ S
Sbjct: 148 PFSTRKTMAKPQVMCTSK*QCINQAPGLSATNLMAAHPLTGTATVLRMGGSTRLKV*GSV 327
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LPKPS M*KS*P RW+GW
Sbjct: 328 RGL*LPKPSPTM*KS*P*RWIGW 396
>gb|CX652066.1|CX652066 COLD1_56_E11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_56_E11_A029 5', mRNA sequence
Length = 768
Score = 186 bits (400), Expect = 8e-047
Identities = 72/114 (63%), Positives = 83/114 (72%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+ EGFGN++ D +FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 749 NHPIHLHGYDFYIVGEGFGNYNPRTDPQTFNLVDPPMRNTVAVPVNGWAAIRFVADNPGA 570
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHRGXXLI 342
LMHCHLDVHITWGLAM FLVE+G M ++E D +C* H ++
Sbjct: 569 WLMHCHLDVHITWGLAMVFLVENGPTYMTTIETPPPDLPVC*KTWPQHNSIIML 408
Score = 117 bits (251), Expect = 3e-026
Identities = 52/83 (62%), Positives = 59/83 (71%)
Frame = -2 / +1
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P STR MA+PQVMCTS+ QC++ PGLSAT M A PLTGT TV MGGS+ LK+ S
Sbjct: 499 PFSTRKTMAKPQVMCTSK*QCINQAPGLSATNLMAAHPLTGTATVLRMGGSTRLKV*GSV 678
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LPKPS M*KS*P RW+GW
Sbjct: 679 RGL*LPKPSPTM*KS*P*RWIGW 747
>gb|DR060986.1|DR060986 RTNIT1_31_G11.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_31_G11_A029 3', mRNA sequence
Length = 842
Score = 186 bits (400), Expect = 8e-047
Identities = 72/102 (70%), Positives = 80/102 (78%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+ EGFGNFD D +FN+ DPP RNTVGVPVNGW+ IRFVA+NPG
Sbjct: 321 NHPIHLHGYDFYIVGEGFGNFDPQRDPLTFNLIDPPQRNTVGVPVNGWSAIRFVANNPGV 500
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLAMAF VE+G + LEA D +C*
Sbjct: 501 WLMHCHLDVHITWGLAMAFAVENGPHHLARLEAPPLDLPLC* 626
Score = 110 bits (234), Expect = 7e-024
Identities = 48/82 (58%), Positives = 53/82 (64%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P ST AMA P V+CTSRWQC+S PGL AT + P TGTPTV GGS L + S
Sbjct: 571 PFSTAKAMASPHVICTSRWQCISQTPGLLATNLIADHPFTGTPTVLRCGGSMRLNVRGSR 392
Query: 71 XASKLPKPSARM*KS*PWRWMG 6
SK PKPS M*KS*PWR +G
Sbjct: 391 CGSKFPKPSPTM*KS*PWR*IG 326
>gb|DR116909.1|DR116909 RTMG1_3_C03.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_3_C03_A029 5', mRNA sequence
Length = 905
Score = 186 bits (400), Expect = 8e-047
Identities = 72/102 (70%), Positives = 80/102 (78%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHGYDFYI+ EGFGNFD D +FN+ DPP RNTVGVPVNGW+ IRFVA+NPG
Sbjct: 275 NHPIHLHGYDFYIVGEGFGNFDPQRDPLTFNLIDPPQRNTVGVPVNGWSAIRFVANNPGV 454
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLAMAF VE+G + LEA D +C*
Sbjct: 455 WLMHCHLDVHITWGLAMAFAVENGPHHLARLEAPPLDLPLC* 580
Score = 110 bits (234), Expect = 7e-024
Identities = 48/82 (58%), Positives = 53/82 (64%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P ST AMA P V+CTSRWQC+S PGL AT + P TGTPTV GGS L + S
Sbjct: 525 PFSTAKAMASPHVICTSRWQCISQTPGLLATNLIADHPFTGTPTVLRCGGSMRLNVRGSR 346
Query: 71 XASKLPKPSARM*KS*PWRWMG 6
SK PKPS M*KS*PWR +G
Sbjct: 345 CGSKFPKPSPTM*KS*PWR*IG 280
>gb|DR079949.1|DR079949 RTFEPL1_19_A07.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_19_A07_A029 3', mRNA sequence
Length = 648
Score = 183 bits (394), Expect = 6e-046
Identities = 71/102 (69%), Positives = 80/102 (78%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
N+PIHLHGYDFYI+ EGFGNFD D +FN+ DPP RNTVGVPVNGW+ IRFVA+NPG
Sbjct: 118 NYPIHLHGYDFYIVGEGFGNFDPQRDPLTFNLIDPPQRNTVGVPVNGWSAIRFVANNPGV 297
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLAMAF VE+G + LEA D +C*
Sbjct: 298 WLMHCHLDVHITWGLAMAFAVENGPHHLARLEAPPLDLPLC* 423
Score = 110 bits (234), Expect = 7e-024
Identities = 48/82 (58%), Positives = 53/82 (64%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P ST AMA P V+CTSRWQC+S PGL AT + P TGTPTV GGS L + S
Sbjct: 368 PFSTAKAMASPHVICTSRWQCISQTPGLLATNLIADHPFTGTPTVLRCGGSMRLNVRGSR 189
Query: 71 XASKLPKPSARM*KS*PWRWMG 6
SK PKPS M*KS*PWR +G
Sbjct: 188 CGSKFPKPSPTM*KS*PWR*IG 123
>gb|DR023255.1|DR023255 STRS1_56_A07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_A07_A034 5', mRNA sequence
Length = 774
Score = 182 bits (392), Expect = 1e-045
Identities = 69/102 (67%), Positives = 80/102 (78%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN+++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 426 SHPIHLHGYDFYIVGSGFGNYNSQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 605
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLAM F+V +G G + SLE+ D +C*
Sbjct: 606 WLMHCHLDVHITWGLAMVFVVNNGPGYLLSLESPPRDLPLC* 731
Score = 111 bits (237), Expect = 3e-024
Identities = 48/84 (57%), Positives = 55/84 (65%)
Frame = -2 / -3
Query: 257 PTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAV 78
P P T +A PQV+CTS+WQC+S PGLSAT + AQPLTGT TV MGGS+ L
Sbjct: 682 PGPLLTTKTIANPQVICTSKWQCISQAPGLSATNLIAAQPLTGTFTVLRMGGSTRLNF*G 503
Query: 77 SAXASKLPKPSARM*KS*PWRWMG 6
S LP P M*KS*PWRW+G
Sbjct: 502 SVCEL*LPNPDPTM*KS*PWRWIG 431
>gb|DR099105.1|DR099105 STRR1_53_D12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_D12_A033 3', mRNA sequence
Length = 793
Score = 182 bits (392), Expect = 1e-045
Identities = 69/102 (67%), Positives = 80/102 (78%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN+++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 251 SHPIHLHGYDFYIVGSGFGNYNSQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 430
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLAM F+V +G G + SLE+ D +C*
Sbjct: 431 WLMHCHLDVHITWGLAMVFVVNNGPGYLLSLESPPRDLPLC* 556
Score = 111 bits (237), Expect = 3e-024
Identities = 48/84 (57%), Positives = 55/84 (65%)
Frame = -2 / -2
Query: 257 PTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAV 78
P P T +A PQV+CTS+WQC+S PGLSAT + AQPLTGT TV MGGS+ L
Sbjct: 507 PGPLLTTKTIANPQVICTSKWQCISQAPGLSATNLIAAQPLTGTFTVLRMGGSTRLNF*G 328
Query: 77 SAXASKLPKPSARM*KS*PWRWMG 6
S LP P M*KS*PWRW+G
Sbjct: 327 SVCEL*LPNPDPTM*KS*PWRWIG 256
>gb|DR100018.1|DR100018 STRR1_61_B02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_61_B02_A033 3', mRNA sequence
Length = 860
Score = 182 bits (392), Expect = 1e-045
Identities = 69/102 (67%), Positives = 80/102 (78%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN+++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 305 SHPIHLHGYDFYIVGSGFGNYNSQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 484
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLAM F+V +G G + SLE+ D +C*
Sbjct: 485 WLMHCHLDVHITWGLAMVFVVNNGPGYLLSLESPPRDLPLC* 610
Score = 111 bits (237), Expect = 3e-024
Identities = 48/84 (57%), Positives = 55/84 (65%)
Frame = -2 / -3
Query: 257 PTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAV 78
P P T +A PQV+CTS+WQC+S PGLSAT + AQPLTGT TV MGGS+ L
Sbjct: 561 PGPLLTTKTIANPQVICTSKWQCISQAPGLSATNLIAAQPLTGTFTVLRMGGSTRLNF*G 382
Query: 77 SAXASKLPKPSARM*KS*PWRWMG 6
S LP P M*KS*PWRW+G
Sbjct: 381 SVCEL*LPNPDPTM*KS*PWRWIG 310
>gb|DR080004.1|DR080004 RTFEPL1_19_A07.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_19_A07_A029 5', mRNA sequence
Length = 346
Score = 179 bits (385), Expect = 1e-044
Identities = 69/97 (71%), Positives = 77/97 (79%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
N+PIHLHGYDFYI+ EGFGNFD D +FN+ DPP RNTVGVPVNGW+ IRFVA+NPG
Sbjct: 54 NYPIHLHGYDFYIVGEGFGNFDPQRDPLTFNLIDPPQRNTVGVPVNGWSAIRFVANNPGV 233
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXD 291
LMHCHLDVHITWGLAMAF VE+G + LEA D
Sbjct: 234 WLMHCHLDVHITWGLAMAFAVENGPHHLARLEAPPLD 344
Score = 110 bits (234), Expect = 7e-024
Identities = 48/82 (58%), Positives = 53/82 (64%)
Frame = -2 / -1
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P ST AMA P V+CTSRWQC+S PGL AT + P TGTPTV GGS L + S
Sbjct: 304 PFSTAKAMASPHVICTSRWQCISQTPGLLATNLIADHPFTGTPTVLRCGGSMRLNVRGSR 125
Query: 71 XASKLPKPSARM*KS*PWRWMG 6
SK PKPS M*KS*PWR +G
Sbjct: 124 CGSKFPKPSPTM*KS*PWR*IG 59
>gb|DR102424.1|DR102424 STRR1_81_B02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_81_B02_A033 3', mRNA sequence
Length = 799
Score = 179 bits (385), Expect = 1e-044
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +1 / -1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHG+DFYI+ GFGN+++ D FN+ DPPMRNTV VP+NGWA IRFVADNPG
Sbjct: 328 SHPIHLHGHDFYIVGAGFGNYNSQTDPQKFNLVDPPMRNTVNVPINGWAAIRFVADNPGA 149
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLAM F+V +G + SLEA D +C*
Sbjct: 148 WLMHCHLDVHITWGLAMVFVVNNGPNSLLSLEAPPSDLPLC* 23
Score = 106 bits (227), Expect = 6e-023
Identities = 47/83 (56%), Positives = 53/83 (63%)
Frame = -2 / +3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N +A+P VMCTSRWQC+S PGLSAT M A PL GT TV MGGS+ L S
Sbjct: 78 PLLTTNTIAKPHVMCTSRWQCISQAPGLSATNLMAAHPLIGTFTVLRMGGSTRLNF*GSV 257
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P+ M*KS P RW+GW
Sbjct: 258 CEL*LPNPAPTM*KSWP*RWIGW 326
>gb|DR024283.1|DR024283 STRS1_63_G03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_63_G03_A034 5', mRNA sequence
Length = 705
Score = 178 bits (383), Expect = 2e-044
Identities = 68/102 (66%), Positives = 79/102 (77%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN+++ D FN+ DPPMRNTV VPVNGWA IRFVA+NPG
Sbjct: 587 SHPIHLHGYDFYIVGAGFGNYNSQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVANNPGA 408
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
LMHCHLDVHITWGLA F+V +G E+ SLEA D +C*
Sbjct: 407 WLMHCHLDVHITWGLATVFVVNNGPDELLSLEAPPRDLPLC* 282
Score = 106 bits (226), Expect = 8e-023
Identities = 52/101 (51%), Positives = 60/101 (59%)
Frame = -2 / +1
Query: 305 *QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGT 126
*Q S AS S P T +A P VM TS+WQC+S PGL AT + AQPLTGT
Sbjct: 283 *QSGRSLGGASRLKSSSGPLFTTKTVANPHVM*TSKWQCISQAPGLLATNLIAAQPLTGT 462
Query: 125 PTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMGW 3
TV +GGS+ L S LPKP+ M*KS*PWRW+GW
Sbjct: 463 FTVLRIGGSTKLNF*GSV*EL*LPKPAPTM*KS*PWRWIGW 585
>gb|BX250000.1|BX250000 BX250000 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP031C02 similar to L ASCORBATE OXIDASE, mRNA
sequence
Length = 721
Score = 177 bits (382), Expect = 3e-044
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 326 SHPIHLHGYDFYIVGAGFGNYNAQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 505
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D +C*
Sbjct: 506 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDLPLC* 631
Score = 120 bits (256), Expect = 6e-027
Identities = 50/83 (60%), Positives = 58/83 (69%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L S
Sbjct: 576 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNF*GSV 397
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 396 CAL*LPKPAPTM*KS*PWRWIGW 328
>gb|CX647335.1|CX647335 COLD1_15_H08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_15_H08_A029 3', mRNA sequence
Length = 620
Score = 177 bits (381), Expect = 3e-044
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 149 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 328
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D +C*
Sbjct: 329 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDLPLC* 454
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 399 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 220
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 219 CAL*LPKPAPTM*KS*PWRWIGW 151
>gb|DR178921.1|DR178921 RTMNUT1_14_G02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_14_G02_A029 5', mRNA sequence
Length = 734
Score = 177 bits (381), Expect = 3e-044
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 600 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 421
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D +C*
Sbjct: 420 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDLPLC* 295
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / +2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 350 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 529
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 530 CAL*LPKPAPTM*KS*PWRWIGW 598
>gb|AF132120.1|AF132120 Pinus taeda laccase (Lac2) mRNA, complete cds
Length = 1958
Score = 177 bits (381), Expect = 3e-044
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 1494 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 1673
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D +C*
Sbjct: 1674 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDLPLC* 1799
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 1744 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 1565
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 1564 CAL*LPKPAPTM*KS*PWRWIGW 1496
>dbj|BD224536.1| Materials and methods for the modification of plant lignin content
Length = 1352
Score = 177 bits (381), Expect = 3e-044
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 957 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 1136
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D +C*
Sbjct: 1137 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDLPLC* 1262
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 1207 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 1028
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 1027 CAL*LPKPAPTM*KS*PWRWIGW 959
>gb|AW290117.1|AW290117 NXNV010D09F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV010D09 5', mRNA sequence
Length = 500
Score = 177 bits (381), Expect = 3e-044
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 89 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 268
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D +C*
Sbjct: 269 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDLPLC* 394
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 339 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 160
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 159 CAL*LPKPAPTM*KS*PWRWIGW 91
>gb|BQ702308.1|BQ702308 NXSI_127_C02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_127_C02 5' similar to Arabidopsis thaliana
sequence At5g05390 laccase (diphenol oxidase) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 557
Score = 177 bits (381), Expect = 3e-044
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 95 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 274
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D +C*
Sbjct: 275 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDLPLC* 400
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 345 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 166
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 165 CAL*LPKPAPTM*KS*PWRWIGW 97
>gb|CD026741.1|CD026741 NXNV010D09 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV010D09 5' similar to Arabidopsis thaliana sequence
At5g05390 laccase (diphenol oxidase) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 500
Score = 177 bits (381), Expect = 3e-044
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 89 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 268
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D +C*
Sbjct: 269 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDLPLC* 394
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 339 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 160
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 159 CAL*LPKPAPTM*KS*PWRWIGW 91
>gb|AW289657.1|AW289657 NXNV003D03F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV003D03 5', mRNA sequence
Length = 503
Score = 177 bits (380), Expect = 5e-044
Identities = 67/102 (65%), Positives = 78/102 (76%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 23 SHPIHLHGYDFYIVGAGFGNYNRQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 202
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SLE+ D +C*
Sbjct: 203 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLESPPRDLPLC* 328
Score = 115 bits (245), Expect = 2e-025
Identities = 48/83 (57%), Positives = 56/83 (67%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L S
Sbjct: 273 PLLTTNTMASPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNF*GSV 94
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P+ M*KS*PWRW+GW
Sbjct: 93 CRL*LPNPAPTM*KS*PWRWIGW 25
>gb|CD028198.1|CD028198 NXNV003D03 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV003D03 5' similar to Arabidopsis thaliana sequence
At5g05390 laccase (diphenol oxidase) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 503
Score = 177 bits (380), Expect = 5e-044
Identities = 67/102 (65%), Positives = 78/102 (76%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 23 SHPIHLHGYDFYIVGAGFGNYNRQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 202
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SLE+ D +C*
Sbjct: 203 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLESPPRDLPLC* 328
Score = 115 bits (245), Expect = 2e-025
Identities = 48/83 (57%), Positives = 56/83 (67%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L S
Sbjct: 273 PLLTTNTMASPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNF*GSV 94
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P+ M*KS*PWRW+GW
Sbjct: 93 CRL*LPNPAPTM*KS*PWRWIGW 25
>gb|BX682255.2|BX682255 BX682255 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 114B08 similar to Ubiquitin, mRNA sequence
Length = 541
Score = 175 bits (377), Expect = 1e-043
Identities = 66/102 (64%), Positives = 78/102 (76%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 67 SHPIHLHGYDFYIVGAGFGNYNPQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 246
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D +C*
Sbjct: 247 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDLPLC* 372
Score = 115 bits (246), Expect = 1e-025
Identities = 48/83 (57%), Positives = 56/83 (67%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L S
Sbjct: 317 PLLTTNTMASPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNF*GSV 138
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P+ M*KS*PWRW+GW
Sbjct: 137 CGL*LPNPAPTM*KS*PWRWIGW 69
>gb|AF132122.1|AF132122 Pinus taeda laccase (Lac4) mRNA, complete cds
Length = 2208
Score = 175 bits (376), Expect = 2e-043
Identities = 66/102 (64%), Positives = 77/102 (75%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 1521 SHPIHLHGYDFYIVGSGFGNYNPKTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 1700
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + S+E+ D C*
Sbjct: 1701 WVMHCHLDVHITWGLAMVFVVSNGPSSLLSIESPPLDLPQC* 1826
Score = 113 bits (242), Expect = 5e-025
Identities = 47/83 (56%), Positives = 54/83 (65%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T MA+P VMCTS+WQC++ PGLSAT M AQPLTGT TV +GGS+ L S
Sbjct: 1771 PLLTTKTMAKPHVMCTSKWQCITQAPGLSATNLMAAQPLTGTFTVLRIGGSTRLNF*GSV 1592
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P M*KS PWRW+GW
Sbjct: 1591 FGL*LPNPDPTM*KSYPWRWIGW 1523
>gb|BX249680.1|BX249680 BX249680 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP027A08 similar to L ASCORBATE OXIDASE, mRNA
sequence
Length = 660
Score = 174 bits (375), Expect = 2e-043
Identities = 64/93 (68%), Positives = 75/93 (80%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 382 SHPIHLHGYDFYIVGAGFGNYNAQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 561
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEA 279
+MHCHLDVHITWGLAM F+V +G + SL++
Sbjct: 562 WVMHCHLDVHITWGLAMVFVVNNGPDSLSSLQS 660
Score = 110 bits (234), Expect = 7e-024
Identities = 47/82 (57%), Positives = 55/82 (67%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T +A P VMCTS+WQC++ PGLSAT M AQPLTGT TV +GGS+ L S
Sbjct: 632 PLLTTKTIANPHVMCTSKWQCITQAPGLSATNLMAAQPLTGTFTVLRIGGSTRLNF*GSV 453
Query: 71 XASKLPKPSARM*KS*PWRWMG 6
A LP P+ M*KS*PWRW+G
Sbjct: 452 CAL*LPNPAPTM*KS*PWRWIG 387
>gb|CF474140.1|CF474140 RTWW2_17_D03.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_17_D03_A021 3', mRNA sequence
Length = 679
Score = 174 bits (375), Expect = 2e-043
Identities = 67/102 (65%), Positives = 78/102 (76%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 93 SHPIHLHGYDFYIVGAGFGNYNAQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 272
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D C*
Sbjct: 273 WVMHCHLDVHITWGLAMVFVVNNGPDLLLSLQSPPLDLPQC* 398
Score = 115 bits (245), Expect = 2e-025
Identities = 48/83 (57%), Positives = 56/83 (67%)
Frame = -2 / -1
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T +A P VMCTS+WQC++ PGLSAT M AQPLTGT TV +GGS+ L S
Sbjct: 343 PLLTTKTIANPHVMCTSKWQCITQAPGLSATNLMAAQPLTGTFTVLRIGGSTRLNF*GSV 164
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LP P+ M*KS*PWRW+GW
Sbjct: 163 CAL*LPNPAPTM*KS*PWRWIGW 95
>gb|BX250739.1|BX250739 BX250739 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP040F08 similar to L ASCORBATE OXIDASE, mRNA
sequence
Length = 630
Score = 173 bits (373), Expect = 4e-043
Identities = 65/102 (63%), Positives = 77/102 (75%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFY++ GFGN++A D FN+ DPPMRNTV VPVNGWA IR VADNPG
Sbjct: 100 SHPIHLHGYDFYVVGSGFGNYNAKTDPQMFNLVDPPMRNTVNVPVNGWAAIRLVADNPGA 279
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + S+E+ D C*
Sbjct: 280 WVMHCHLDVHITWGLAMVFVVSNGPSSLLSIESPPLDLPQC* 405
Score = 116 bits (247), Expect = 1e-025
Identities = 48/83 (57%), Positives = 56/83 (67%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T MA+P VMCTS+WQC++ PGLSAT M AQPLTGT TV +GGS+ L + S
Sbjct: 350 PLLTTKTMAKPHVMCTSKWQCITQAPGLSATSLMAAQPLTGTFTVLRIGGSTRLNI*GSV 171
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LP P *KS*PWRW+GW
Sbjct: 170 FAL*LPNPDPTT*KS*PWRWIGW 102
>gb|BQ700010.1|BQ700010 NXRV133_A09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV133_A09 5' similar to Arabidopsis thaliana
sequence At5g05390 laccase (diphenol oxidase) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 765
Score = 173 bits (373), Expect = 4e-043
Identities = 66/101 (65%), Positives = 78/101 (77%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 296 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 475
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC 303
+MHCHLDVHITWGLAM F+V +G + SL++ +C
Sbjct: 476 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPXXLPLC 598
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / -1
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 546 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 367
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 366 CAL*LPKPAPTM*KS*PWRWIGW 298
>gb|CD028514.1|CD028514 NXSI_119_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_119_H02 5' similar to Arabidopsis thaliana
sequence At5g05390 laccase (diphenol oxidase) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 561
Score = 173 bits (373), Expect = 4e-043
Identities = 66/102 (64%), Positives = 78/102 (76%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++ +D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 82 SHPIHLHGYDFYIVGAGFGNYNPQSDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 261
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D C*
Sbjct: 262 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPIDFPRC* 387
Score = 108 bits (230), Expect = 2e-023
Identities = 47/83 (56%), Positives = 55/83 (66%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L S
Sbjct: 332 PLLTTNTMASPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTKLNF*GSL 153
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P+ M*KS*PWR +GW
Sbjct: 152 CGL*LPNPAPTM*KS*PWR*IGW 84
>gb|CX646584.1|CX646584 COLD1_10_F02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_F02_A029 3', mRNA sequence
Length = 837
Score = 173 bits (372), Expect = 6e-043
Identities = 66/102 (64%), Positives = 77/102 (75%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 569 SHPIHLHGYDFYIVGAGFGNYNPQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 390
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + SL++ D C*
Sbjct: 389 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQSPPRDFPRC* 264
Score = 108 bits (231), Expect = 2e-023
Identities = 47/83 (56%), Positives = 55/83 (66%)
Frame = -2 / +1
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L S
Sbjct: 319 PLLTTNTMASPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNF*GSV 498
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P+ M*KS*PWR +GW
Sbjct: 499 CGL*LPNPAPTM*KS*PWR*IGW 567
>gb|CF473790.1|CF473790 RTWW2_4_G02.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_4_G02_A021 5', mRNA sequence
Length = 659
Score = 172 bits (370), Expect = 1e-042
Identities = 64/97 (65%), Positives = 75/97 (77%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN+++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 365 SHPIHLHGYDFYIVGSGFGNYNSKTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 544
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXD 291
+MHCHLDVHITWGLAM F+V +G S+E+ D
Sbjct: 545 WVMHCHLDVHITWGLAMVFVVSNGPSAFFSIESPPVD 655
Score = 117 bits (251), Expect = 3e-026
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T MA+PQVMCTS+WQC++ PGLSAT M AQPLTGT TV +GGS+ L S
Sbjct: 615 PLLTTKTMAKPQVMCTSKWQCITQAPGLSATNLMAAQPLTGTFTVLRIGGSTRLNF*GSV 436
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P M*KS*PWRW+GW
Sbjct: 435 FEL*LPNPDPTM*KS*PWRWIGW 367
>gb|DR178837.1|DR178837 RTMNUT1_14_G02.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_14_G02_A029 3', mRNA sequence
Length = 897
Score = 172 bits (370), Expect = 1e-042
Identities = 64/92 (69%), Positives = 74/92 (80%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 277 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 98
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLE 276
+MHCHLDVHITWGLAM F+V +G + SL+
Sbjct: 97 WVMHCHLDVHITWGLAMVFVVNNGPDALLSLQ 2
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / +3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 27 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 206
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 207 CAL*LPKPAPTM*KS*PWRWIGW 275
>gb|CF398272.1|CF398272 RTDS3_24_F12.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_24_F12_A022 5', mRNA sequence
Length = 633
Score = 171 bits (369), Expect = 2e-042
Identities = 64/91 (70%), Positives = 73/91 (80%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN+++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 360 SHPIHLHGYDFYIVGAGFGNYNSQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 539
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSL 273
LMHCHLDVHITWGLA F+V +G E+ SL
Sbjct: 540 CLMHCHLDVHITWGLATVFVVNNGPDELLSL 632
Score = 111 bits (236), Expect = 3e-024
Identities = 47/86 (54%), Positives = 55/86 (63%)
Frame = -2 / -3
Query: 260 SPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLA 81
S P T +A P VMCTS+WQC+ PGLSAT + AQPLTGT TV +GGS+ L
Sbjct: 619 SSGPLFTTKTVANPHVMCTSKWQCIRQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNF* 440
Query: 80 VSAXASKLPKPSARM*KS*PWRWMGW 3
S PKP+ M*KS*PWRW+GW
Sbjct: 439 GSVCEL*FPKPAPTM*KS*PWRWIGW 362
>dbj|BD224537.1| Materials and methods for the modification of plant lignin content
Length = 337
Score = 171 bits (369), Expect = 2e-042
Identities = 64/91 (70%), Positives = 73/91 (80%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 63 SHPIHLHGYDFYIVGAGFGNYNAQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 242
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSL 273
+MHCHLDVHITWGLAM F+V +G + SL
Sbjct: 243 WVMHCHLDVHITWGLAMVFVVNNGPDPLLSL 335
Score = 115 bits (245), Expect = 2e-025
Identities = 48/83 (57%), Positives = 56/83 (67%)
Frame = -2 / -1
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T +A P VMCTS+WQC++ PGLSAT M AQPLTGT TV +GGS+ L S
Sbjct: 313 PLLTTKTIANPHVMCTSKWQCITQAPGLSATNLMAAQPLTGTFTVLRIGGSTRLNF*GSV 134
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LP P+ M*KS*PWRW+GW
Sbjct: 133 CAL*LPNPAPTM*KS*PWRWIGW 65
>gb|DR166052.1|DR166052 RTPHOS1_9_B07.b2_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_9_B07_A029 3', mRNA sequence
Length = 647
Score = 170 bits (366), Expect = 4e-042
Identities = 65/102 (63%), Positives = 76/102 (74%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++ D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 65 SHPIHLHGYDFYIVGAGFGNYNPQTDPQKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 244
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHI WGLAM F+V +G + SL++ D C*
Sbjct: 245 WVMHCHLDVHIKWGLAMVFVVNNGPDALLSLQSPPRDFPRC* 370
Score = 106 bits (226), Expect = 8e-023
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P MCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L S
Sbjct: 315 PLLTTNTMASPHFMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNF*GSV 136
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P+ M*KS*PWR +GW
Sbjct: 135 CGL*LPNPAPTM*KS*PWR*IGW 67
>gb|BF516721.1|BF516721 NXSI_002_E10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_002_E10 5' similar to Arabidopsis thaliana
sequence At5g05390 laccase (diphenol oxidase) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 376
Score = 170 bits (365), Expect = 6e-042
Identities = 65/102 (63%), Positives = 77/102 (75%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VPVNGWA IRFVADNPG
Sbjct: 31 SHPIHLHGYDFYIVGAGFGNYNAQTDPHKFNLVDPPMRNTVNVPVNGWAAIRFVADNPGA 210
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+MHCHLDVHITWGLAM F+V +G + ++ +C*
Sbjct: 211 WVMHCHLDVHITWGLAMVFVVNNGPDALLXXQSPPRXXPLC* 336
Score = 122 bits (260), Expect = 2e-027
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T N MA P VMCTS+WQC++ PGLSAT + AQPLTGT TV +GGS+ L L S
Sbjct: 281 PLLTTNTMANPHVMCTSKWQCITQAPGLSATNLIAAQPLTGTFTVLRIGGSTRLNL*GSV 102
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LPKP+ M*KS*PWRW+GW
Sbjct: 101 CAL*LPKPAPTM*KS*PWRWIGW 33
>gb|CF478305.1|CF478305 RTWW3_18_E06.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_18_E06_A022 3', mRNA sequence
Length = 655
Score = 166 bits (357), Expect = 7e-041
Identities = 64/101 (63%), Positives = 73/101 (72%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++ D FN+ DPP RNTV VPVNGWA IRFVADNPG
Sbjct: 18 SHPIHLHGYDFYIVGTGFGNYNPIRDPKHFNLVDPPKRNTVNVPVNGWAAIRFVADNPGV 197
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC 303
+ HCHLDVHITWGLAM F+VE+G SL+ D C
Sbjct: 198 WMFHCHLDVHITWGLAMCFVVENGPDYGSSLQRPPRDLPRC 320
Score = 103 bits (219), Expect = 8e-022
Identities = 48/83 (57%), Positives = 51/83 (61%)
Frame = -2 / -1
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P ST MA+P VMCTSRWQ PGLSAT + A PLTGT TV GGS+ LK S
Sbjct: 268 PFSTTKHMAKPHVMCTSRWQWNIQTPGLSATNLIAAHPLTGTFTVLRFGGSTRLKCFGSL 89
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
LP P M*KS*PWR MGW
Sbjct: 88 IGL*LPNPVPTM*KS*PWR*MGW 20
>gb|AF132126.1|AF132126 Pinus taeda laccase (Lac8) mRNA, complete cds
Length = 1924
Score = 166 bits (357), Expect = 7e-041
Identities = 65/102 (63%), Positives = 74/102 (72%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHG++F+I+ GFGN+D D ASFN+ DPP RNTVGVP GW VIRF ADNPG
Sbjct: 1480 NHPIHLHGFNFFIVGRGFGNYDPNTDPASFNLVDPPERNTVGVPTGGWTVIRFRADNPGV 1659
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
MHCHL+VH TWGL MAFLVE+G G QS+ D C*
Sbjct: 1660 WFMHCHLEVHTTWGLKMAFLVENGDGPDQSMLPPPSDFPKC* 1785
Score = 115 bits (245), Expect = 2e-025
Identities = 52/100 (52%), Positives = 61/100 (61%)
Frame = -2 / -3
Query: 305 *QMXXSXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGT 126
* + S + D P+P STRNA+ P V+CTSR QC++ PGLSA KRMT QP GT
Sbjct: 1784 *HLGKSLGGGNMD*SGPSPFSTRNAIFNPHVVCTSR*QCINQTPGLSALKRMTVQPPVGT 1605
Query: 125 PTVFLMGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMG 6
PTV GGS+ LKLA S S P P M K PWRW+G
Sbjct: 1604 PTVLRSGGSTRLKLAGSVLGS*FPNPLPTMKKLKPWRWIG 1485
>gb|CO362368.1|CO362368 RTK1_3_D05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_3_D05_A029 3', mRNA sequence
Length = 691
Score = 165 bits (355), Expect = 1e-040
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHG++F+I+ GFGN+D D ASFN+ DPP RNTVGVP GW VIRF ADNPG
Sbjct: 247 NHPIHLHGFNFFIVGRGFGNYDPNTDPASFNLVDPPERNTVGVPTGGWTVIRFRADNPGV 426
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSL 273
MHCHL+VH TWGL MAFLVE+G G QS+
Sbjct: 427 WFMHCHLEVHTTWGLKMAFLVENGDGPDQSI 519
Score = 114 bits (243), Expect = 4e-025
Identities = 49/84 (58%), Positives = 56/84 (66%)
Frame = -2 / -3
Query: 257 PTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAV 78
P+P STRNA+ P V+CTSR QC++ PGLSA KRMT QP GTPTV GGS+ LKLA
Sbjct: 503 PSPFSTRNAIFNPHVVCTSR*QCINQTPGLSALKRMTVQPPVGTPTVLRSGGSTRLKLAG 324
Query: 77 SAXASKLPKPSARM*KS*PWRWMG 6
S S P P M K PWRW+G
Sbjct: 323 SVLGS*FPNPLPTMKKLKPWRWIG 252
>gb|CV035707.1|CV035707 RTNACL1_41_H12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_41_H12_A029 5', mRNA sequence
Length = 756
Score = 165 bits (355), Expect = 1e-040
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHPIHLHG++F+I+ GFGN+D D ASFN+ DPP RNTVGVP GW VIRF ADNPG
Sbjct: 463 NHPIHLHGFNFFIVGRGFGNYDPNTDPASFNLVDPPERNTVGVPTGGWTVIRFRADNPGV 642
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSL 273
MHCHL+VH TWGL MAFLVE+G G QS+
Sbjct: 643 WFMHCHLEVHTTWGLKMAFLVENGDGPDQSI 735
Score = 114 bits (244), Expect = 3e-025
Identities = 51/95 (53%), Positives = 59/95 (62%)
Frame = -2 / -2
Query: 290 SXXXASSDCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFL 111
S + D P+P STRNA+ P V+CTSR QC++ PGLSA KRMT QP GTPTV
Sbjct: 752 SLGGGNMD*SGPSPFSTRNAIFNPHVVCTSR*QCINQTPGLSALKRMTVQPPVGTPTVLR 573
Query: 110 MGGSSMLKLAVSAXASKLPKPSARM*KS*PWRWMG 6
GGS+ LKLA S S P P M K PWRW+G
Sbjct: 572 SGGSTRLKLAGSVLGS*FPNPLPTMKKLKPWRWIG 468
>gb|BF169952.1|BF169952 NXCI_122_H06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_122_H06 5' similar to Arabidopsis
thaliana sequence At5g05390 laccase (diphenol oxidase)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 360
Score = 165 bits (355), Expect = 1e-040
Identities = 61/93 (65%), Positives = 72/93 (77%)
Frame = +1 / +3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
+HPIHLHGYDFYI+ GFGN++A D FN+ DPPMRNTV VP NGWA IRFVADNPG
Sbjct: 9 SHPIHLHGYDFYIVGAGFGNYNAQTDPQKFNLVDPPMRNTVNVPXNGWAAIRFVADNPGA 188
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEA 279
+MHCH VHITWGLAM F+V +G + SL++
Sbjct: 189 WVMHCHXXVHITWGLAMVFVVNNGPDPLLSLQS 287
Score = 111 bits (236), Expect = 3e-024
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = -2 / -3
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P T +A P VMCT +WQC++ PGLSAT M AQPL GT TV +GGS+ L S
Sbjct: 259 PLLTTKTIANPHVMCTXKWQCITQAPGLSATNLMAAQPLXGTFTVLRIGGSTRLNF*GSV 80
Query: 71 XASKLPKPSARM*KS*PWRWMGW 3
A LP P+ M*KS*PWRW+GW
Sbjct: 79 CAL*LPNPAPTM*KS*PWRWIGW 11
>gb|BI202922.1|BI202922 NXPV_092_E06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_092_E06 5' similar to Arabidopsis
thaliana sequence At5g03260 laccase (diphenol
oxidase)-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 535
Score = 164 bits (353), Expect = 3e-040
Identities = 64/104 (61%), Positives = 74/104 (71%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHP+HLHG++F+I+ GFGN+D D A FN+ DPP RNTVGVP GW VIRF ADNPG
Sbjct: 41 NHPVHLHGFNFFIVGRGFGNYDPKKDPAKFNLVDPPERNTVGVPTGGWTVIRFRADNPGV 220
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LI 312
MHCHL+VH TWGL MAFLVE+G G QS+ D C* I
Sbjct: 221 WFMHCHLEVHTTWGLKMAFLVENGHGPEQSILPPPKDLPQC*SI 352
Score = 113 bits (242), Expect = 5e-025
Identities = 50/89 (56%), Positives = 55/89 (61%)
Frame = -2 / -2
Query: 269 DCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSML 90
DC P P STRNA+ PQV+CTSR QCM+ PGLSA R+T QP GTPTV GGS+ L
Sbjct: 309 DCSGPCPFSTRNAIFSPQVVCTSR*QCMNQTPGLSALNRITVQPPVGTPTVLRSGGSTRL 130
Query: 89 KLAVSAXASKLPKPSARM*KS*PWRWMGW 3
LA S S P P M K P RW GW
Sbjct: 129 NLAGSFLGS*FPNPLPTMKKLKPCRWTGW 43
>gb|CF398883.1|CF398883 RTDS3_11_G12.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_11_G12_A022 3', mRNA sequence
Length = 640
Score = 164 bits (353), Expect = 3e-040
Identities = 64/104 (61%), Positives = 74/104 (71%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHP+HLHG++F+I+ GFGN+D D A FN+ DPP RNTVGVP GW VIRF ADNPG
Sbjct: 4 NHPVHLHGFNFFIVGRGFGNYDPKKDPAKFNLVDPPERNTVGVPTGGWTVIRFRADNPGV 183
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LI 312
MHCHL+VH TWGL MAFLVE+G G QS+ D C* I
Sbjct: 184 WFMHCHLEVHTTWGLKMAFLVENGHGPEQSILPPPKDLPQC*SI 315
Score = 113 bits (242), Expect = 5e-025
Identities = 50/89 (56%), Positives = 55/89 (61%)
Frame = -2 / -3
Query: 269 DCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSML 90
DC P P STRNA+ PQV+CTSR QCM+ PGLSA R+T QP GTPTV GGS+ L
Sbjct: 272 DCSGPCPFSTRNAIFSPQVVCTSR*QCMNQTPGLSALNRITVQPPVGTPTVLRSGGSTRL 93
Query: 89 KLAVSAXASKLPKPSARM*KS*PWRWMGW 3
LA S S P P M K P RW GW
Sbjct: 92 NLAGSFLGS*FPNPLPTMKKLKPCRWTGW 6
>gb|CO200210.1|CO200210 GEO2_6_C07.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_6_C07_A032 3', mRNA sequence
Length = 851
Score = 164 bits (353), Expect = 3e-040
Identities = 64/104 (61%), Positives = 74/104 (71%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHP+HLHG++F+I+ GFGN+D D A FN+ DPP RNTVGVP GW VIRF ADNPG
Sbjct: 193 NHPVHLHGFNFFIVVRGFGNYDPKKDPAKFNLVDPPERNTVGVPTGGWTVIRFRADNPGV 372
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LI 312
MHCHL+VH TWGL MAFLVE+G G QS+ D C* I
Sbjct: 373 WFMHCHLEVHTTWGLKMAFLVENGHGPEQSILPPPKDLPQC*SI 504
Score = 114 bits (243), Expect = 4e-025
Identities = 50/89 (56%), Positives = 55/89 (61%)
Frame = -2 / -1
Query: 269 DCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSML 90
DC P P STRNA+ PQV+CTSR QCM+ PGLSA R+T QP GTPTV GGS+ L
Sbjct: 461 DCSGPCPFSTRNAIFSPQVVCTSR*QCMNQTPGLSALNRITVQPPVGTPTVLRSGGSTRL 282
Query: 89 KLAVSAXASKLPKPSARM*KS*PWRWMGW 3
LA S S P P M K P RW GW
Sbjct: 281 NLAGSFLGS*FPNPLTTMKKLKPCRWTGW 195
>gb|DR089078.1|DR089078 RTAL1_6_A01.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_6_A01_A029 5', mRNA sequence
Length = 749
Score = 164 bits (353), Expect = 3e-040
Identities = 64/104 (61%), Positives = 74/104 (71%)
Frame = +1 / -3
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHP+HLHG++F+I+ GFGN+D D A FN+ DPP RNTVGVP GW VIRF ADNPG
Sbjct: 561 NHPVHLHGFNFFIVGRGFGNYDPKKDPAKFNLVDPPERNTVGVPTGGWTVIRFRADNPGV 382
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LI 312
MHCHL+VH TWGL MAFLVE+G G QS+ D C* I
Sbjct: 381 WFMHCHLEVHTTWGLKMAFLVENGHGPEQSILPPPKDLPQC*SI 250
Score = 113 bits (242), Expect = 5e-025
Identities = 50/89 (56%), Positives = 55/89 (61%)
Frame = -2 / +2
Query: 269 DCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSML 90
DC P P STRNA+ PQV+CTSR QCM+ PGLSA R+T QP GTPTV GGS+ L
Sbjct: 293 DCSGPCPFSTRNAIFSPQVVCTSR*QCMNQTPGLSALNRITVQPPVGTPTVLRSGGSTRL 472
Query: 89 KLAVSAXASKLPKPSARM*KS*PWRWMGW 3
LA S S P P M K P RW GW
Sbjct: 473 NLAGSFLGS*FPNPLPTMKKLKPCRWTGW 559
>gb|CF474525.1|CF474525 RTWW2_9_H03.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_9_H03_A021 3', mRNA sequence
Length = 710
Score = 162 bits (349), Expect = 9e-040
Identities = 64/106 (60%), Positives = 75/106 (70%)
Frame = +1 / +3
Query: 25 YDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGXXLMHCHLD 204
YDFYI+ EGFGN++ D +FN+ DPPMRNTV VPVNGWA IRFVADNPG LMHCHLD
Sbjct: 3 YDFYIVGEGFGNYNPRTDPQTFNLVDPPMRNTVAVPVNGWAAIRFVADNPGAWLMHCHLD 182
Query: 205 VHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LILVLHRGXXLI 342
VHITWGLAM FLVE+G M ++E D +C* H ++
Sbjct: 183 VHITWGLAMVFLVENGPTYMTTIETPPPDLPVC*KTWPQHNSIIML 320
Score = 100 bits (214), Expect = 4e-021
Identities = 47/76 (61%), Positives = 53/76 (69%)
Frame = -2 / -2
Query: 251 PSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSMLKLAVSA 72
P STR MA+PQVMCTS+ QC++ PGLSAT M A PLTGT TV MGGS+ LK+ S
Sbjct: 229 PFSTRKTMAKPQVMCTSK*QCINQAPGLSATNLMAAHPLTGTATVLRMGGSTRLKV*GSV 50
Query: 71 XASKLPKPSARM*KS* 24
LPKPS M*KS*
Sbjct: 49 RGL*LPKPSPTM*KS* 2
>gb|AF132125.1|AF132125 Pinus taeda laccase (Lac7) mRNA, complete cds
Length = 2088
Score = 162 bits (349), Expect = 9e-040
Identities = 63/104 (60%), Positives = 74/104 (71%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHP+HLHG++F+I+ GFGN++ D A FN+ DPP RNTVGVP GW VIRF ADNPG
Sbjct: 1433 NHPVHLHGFNFFIVGRGFGNYNPKKDPAKFNLVDPPERNTVGVPTGGWTVIRFRADNPGV 1612
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC*LI 312
MHCHL+VH TWGL MAFLVE+G G QS+ D C* I
Sbjct: 1613 WFMHCHLEVHTTWGLKMAFLVENGHGPEQSILPPGKDLPQC*SI 1744
Score = 111 bits (236), Expect = 3e-024
Identities = 49/89 (55%), Positives = 54/89 (60%)
Frame = -2 / -1
Query: 269 DCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSML 90
DC P P STRNA+ PQV+CTSR QCM+ PGLSA R+T QP GTPTV GGS+ L
Sbjct: 1701 DCSGPCPFSTRNAIFSPQVVCTSR*QCMNQTPGLSALNRITVQPPVGTPTVLRSGGSTRL 1522
Query: 89 KLAVSAXASKLPKPSARM*KS*PWRWMGW 3
LA S P P M K P RW GW
Sbjct: 1521 NLAGSFLGL*FPNPLPTMKKLKPCRWTGW 1435
>gb|DR012672.1|DR012672 HEAT1_14_G05.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_G05_A029 3', mRNA sequence
Length = 822
Score = 158 bits (340), Expect = 2e-038
Identities = 59/102 (57%), Positives = 72/102 (70%)
Frame = +1 / +2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHP+HLHGY+FY++ +G GN++ D FN+ DPP RNTV PV+GW IRF ADNPG
Sbjct: 329 NHPMHLHGYNFYVVGQGSGNYNPVKDPLKFNLVDPPQRNTVIAPVSGWVAIRFKADNPGV 508
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+HCHLD H TWGL M FLV+DG G +QSLE D +C*
Sbjct: 509 WFLHCHLDDHFTWGLNMVFLVKDGSGPLQSLEPPPRDLPMC* 634
>gb|DR384963.1|DR384963 RTHG1_5_F06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_5_F06_A029 5', mRNA sequence
Length = 759
Score = 158 bits (340), Expect = 2e-038
Identities = 59/102 (57%), Positives = 72/102 (70%)
Frame = +1 / -2
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHP+HLHGY+FY++ +G GN++ D FN+ DPP RNTV PV+GW IRF ADNPG
Sbjct: 491 NHPMHLHGYNFYVVGQGSGNYNPVKDPLKFNLVDPPQRNTVIAPVSGWVAIRFKADNPGV 312
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSLEAXXXDXXIC* 306
+HCHLD H TWGL M FLV+DG G +QSLE D +C*
Sbjct: 311 WFLHCHLDDHFTWGLNMVFLVKDGSGPLQSLEPPPRDLPMC* 186
>gb|BQ701805.1|BQ701805 NXSI_120_G05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_120_G05 5' similar to Arabidopsis thaliana
sequence At5g03260 laccase (diphenol oxidase)-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 545
Score = 157 bits (337), Expect = 4e-038
Identities = 59/91 (64%), Positives = 69/91 (75%)
Frame = +1 / +1
Query: 1 NHPIHLHGYDFYILAEGFGNFDAXADTASFNMDDPPMRNTVGVPVNGWAVIRFVADNPGX 180
NHP+HLHG++F+I+ GFGN+D D A FN+ DPP RNTVGVP GW VIRF ADNPG
Sbjct: 268 NHPVHLHGFNFFIVGRGFGNYDPKKDPAKFNLVDPPERNTVGVPTGGWTVIRFRADNPGV 447
Query: 181 XLMHCHLDVHITWGLAMAFLVEDGVGEMQSL 273
MHCHL+VH T GL MAFLVE+G G QS+
Sbjct: 448 WFMHCHLEVHTTXGLKMAFLVENGHGPEQSI 540
Score = 111 bits (236), Expect = 3e-024
Identities = 49/89 (55%), Positives = 54/89 (60%)
Frame = -2 / -1
Query: 269 DCISPTPSSTRNAMARPQVMCTSRWQCMSXXPGLSATKRMTAQPLTGTPTVFLMGGSSML 90
DC P P STRNA+ P V+CTSR QCM+ PGLSA R+T QP GTPTV GGS+ L
Sbjct: 536 DCSGPCPFSTRNAIFSPXVVCTSR*QCMNQTPGLSALNRITVQPPVGTPTVLRSGGSTRL 357
Query: 89 KLAVSAXASKLPKPSARM*KS*PWRWMGW 3
LA S S P P M K P RW GW
Sbjct: 356 NLAGSFLGS*FPNPLPTMKKLKPCRWTGW 270
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 141,130,970
Number of Sequences: 355925
Number of extensions: 1603351
Number of successful extensions: 48625
Number of sequences better than 1.0e-020: 183
length of database: 72,425,745
effective HSP length: 50
effective length of database: 54,629,495
effective search space used: 4588877580
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)