TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAN11a10.yg.3.1
(1341 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF672052.1|CF672052 RTCNT1_61_B09.b1_A029 Root control P... 347 e-127
gb|CX653143.1|CX653143 COLD1_63_E01.g1_A029 Root cold Pinus... 441 e-123
gb|DR057149.1|DR057149 RTNIT1_2_H11.g1_A029 Roots minus nit... 424 e-118
gb|CO197758.1|CO197758 GEO1_8_H04.g1_A029 Root gravitropism... 424 e-118
gb|CF672123.1|CF672123 RTCNT1_61_B09.g1_A029 Root control P... 267 e-110
gb|DR387760.1|DR387760 RTHG1_24_A07.b1_A029 Roots plus adde... 347 e-110
gb|DR162592.1|DR162592 RTFE1_18_G09.g1_A029 Roots minus iro... 343 e-109
gb|DR016879.1|DR016879 STRS1_12_F01.g1_A034 Shoot tip pitch... 366 e-105
gb|DR079527.1|DR079527 RTFEPL1_11_G08.g1_A029 Roots plus ad... 368 e-105
gb|BX249201.1|BX249201 BX249201 Pinus pinaster differenciat... 281 e-105
gb|DT631219.1|DT631219 EST1146150 Normalized pine embryo li... 228 e-102
gb|BX255691.1|BX255691 BX255691 Pinus pinaster differenciat... 360 1e-098
gb|DR687768.1|DR687768 EST1077850 Normalized pine embryo li... 201 2e-098
gb|DR069923.1|DR069923 RTDK1_10_E11.b1_A029 Roots, dark Pin... 214 9e-094
gb|CO168655.1|CO168655 NDL1_1_D02.g1_A029 Needles control P... 334 9e-094
gb|BM133882.1|BM133882 NXLV_013_F01_F NXLV (Nsf Xylem Late ... 336 2e-091
gb|DR682936.1|DR682936 EST1073011 Normalized pine embryo li... 192 3e-091
gb|CO173605.1|CO173605 NDL1_37_B04.g1_A029 Needles control ... 177 3e-088
gb|DR683144.1|DR683144 EST1073220 Normalized pine embryo li... 177 1e-087
gb|DR055288.1|DR055288 RTCA1_22_F01.g2_A029 Roots minus cal... 293 1e-086
gb|CO363233.1|CO363233 RTK1_8_B02.g1_A029 Roots minus potas... 248 4e-086
gb|DT632758.1|DT632758 EST1147689 Normalized pine embryo li... 317 1e-085
gb|CF474603.1|CF474603 RTWW2_9_B08.g1_A021 Well-watered lob... 312 3e-084
gb|DT628777.1|DT628777 EST1155347 Subtracted pine embryo li... 311 8e-084
gb|DT628835.1|DT628835 EST1155405 Subtracted pine embryo li... 311 8e-084
gb|DR079644.1|DR079644 RTFEPL1_12_D02.g1_A029 Roots plus ad... 180 3e-083
gb|AL751195.1|AL751195 AL751195 RS Pinus pinaster cDNA clon... 292 6e-083
gb|DR016795.1|DR016795 STRS1_12_F01.b1_A034 Shoot tip pitch... 287 8e-082
gb|CO198298.1|CO198298 GEO1_12_E02.g1_A029 Root gravitropis... 300 2e-080
gb|BG318720.1|BG318720 NXPV_016_B04_F NXPV (Nsf Xylem Plani... 298 4e-080
gb|DR079447.1|DR079447 RTFEPL1_11_G08.b1_A029 Roots plus ad... 282 5e-080
gb|CF389793.1|CF389793 RTDR2_5_C08.g1_A021 Loblolly pine ro... 165 5e-080
gb|DR054462.1|DR054462 RTCA1_17_B10.g1_A029 Roots minus cal... 277 4e-078
gb|CF390626.1|CF390626 RTDR2_20_E02.g1_A021 Loblolly pine r... 287 1e-076
gb|BQ697915.1|BQ697915 NXPV_062_D11_F NXPV (Nsf Xylem Plani... 281 6e-075
gb|DR180454.1|DR180454 RTMNUT1_28_E10.g1_A029 Roots minus m... 168 1e-074
gb|BQ703220.1|BQ703220 NXSI_121_A01_F NXSI (Nsf Xylem Side ... 269 4e-073
gb|BF610498.1|BF610498 NXSI_059_C12_F NXSI (Nsf Xylem Side ... 166 5e-073
gb|DR179555.1|DR179555 RTMNUT1_22_H06.g2_A029 Roots minus m... 168 8e-072
gb|DR180375.1|DR180375 RTMNUT1_28_E10.b1_A029 Roots minus m... 253 1e-071
gb|BM428162.1|BM428162 NXRV_011_D07_F NXRV (Nsf Xylem Root ... 161 8e-070
gb|BX255141.1|BX255141 BX255141 Pinus pinaster differenciat... 237 5e-069
gb|BM158725.1|BM158725 NXLV_039_D05_F NXLV (Nsf Xylem Late ... 257 2e-067
gb|BQ698213.1|BQ698213 NXPV_067_G07_F NXPV (Nsf Xylem Plani... 257 2e-067
gb|DR686537.1|DR686537 EST1076615 Normalized pine embryo li... 167 5e-067
gb|AI813019.1|AI813019 2G8 Pine Lambda Zap Xylem library Pi... 247 1e-065
gb|BQ197470.1|BQ197470 NXLV114_G11_F NXLV (Nsf Xylem Late w... 147 4e-064
gb|BX250803.1|BX250803 BX250803 Pinus pinaster differenciat... 160 1e-063
gb|DR050367.1|DR050367 RTBOR1_23_B01.b1_A029 Roots plus add... 167 7e-063
gb|CX648034.1|CX648034 COLD1_26_C12.b1_A029 Root cold Pinus... 223 2e-062
gb|BF778400.1|BF778400 NXSI_082_G11_F NXSI (Nsf Xylem Side ... 236 3e-061
gb|BG319384.1|BG319384 NXPV_027_C10_F NXPV (Nsf Xylem Plani... 233 2e-060
gb|AW870268.1|AW870268 NXNV_128_F05_F Nsf Xylem Normal wood... 229 3e-059
gb|DR689732.1|DR689732 EST1079818 Normalized pine embryo li... 168 1e-058
gb|BQ700267.1|BQ700267 NXRV103_D06_F NXRV (Nsf Xylem Root w... 171 6e-058
gb|DN612882.1|DN612882 EST965932 Subtracted pine embryo lib... 223 3e-057
gb|BG318338.1|BG318338 NXPV_012_D10_F NXPV (Nsf Xylem Plani... 188 4e-057
gb|BQ654619.1|BQ654619 NXRV083_A06_F NXRV (Nsf Xylem Root w... 221 7e-057
gb|BM158430.1|BM158430 NXLV_034_D06_F NXLV (Nsf Xylem Late ... 201 5e-056
gb|DT635659.1|DT635659 EST1150590 Normalized pine embryo li... 168 9e-056
gb|BQ107831.1|BQ107831 NXLV101_A11_F NXLV (Nsf Xylem Late w... 119 2e-055
gb|BQ702581.1|BQ702581 NXSI_130_B12_F NXSI (Nsf Xylem Side ... 129 2e-055
gb|DR079564.1|DR079564 RTFEPL1_12_D02.b1_A029 Roots plus ad... 144 6e-055
gb|AW754968.1|AW754968 PC08H10 Pine TriplEx pollen cone lib... 208 7e-053
gb|BE582222.1|BE582222 NXCI_026_E08_F NXCI (Nsf Xylem Compr... 138 9e-052
gb|BM133886.1|BM133886 NXLV_013_F07_F NXLV (Nsf Xylem Late ... 186 1e-049
gb|DR689257.1|DR689257 EST1079343 Normalized pine embryo li... 150 2e-049
gb|CV033017.1|CV033017 RTNACL1_19_E09.g1_A029 Roots plus ad... 150 3e-049
gb|CO197698.1|CO197698 GEO1_8_H04.b1_A029 Root gravitropism... 182 4e-048
gb|BF778245.1|BF778245 NXSI_082_B07_F NXSI (Nsf Xylem Side ... 192 6e-048
gb|AW011615.1|AW011615 ST22H10 Pine TriplEx shoot tip libra... 169 1e-047
gb|CX648455.1|CX648455 COLD1_28_F05.g1_A029 Root cold Pinus... 113 8e-046
gb|DT635557.1|DT635557 EST1150488 Normalized pine embryo li... 150 9e-046
gb|BQ700870.1|BQ700870 NXRV112_E08_F NXRV (Nsf Xylem Root w... 183 2e-045
gb|BQ699510.1|BQ699510 NXRV123_C04_F NXRV (Nsf Xylem Root w... 168 8e-045
gb|BQ699383.1|BQ699383 NXRV127_B06_F NXRV (Nsf Xylem Root w... 130 3e-044
gb|DR179482.1|DR179482 RTMNUT1_22_H06.b2_A029 Roots minus m... 138 5e-044
gb|CF672002.1|CF672002 RTCNT1_60_E03.g1_A029 Root control P... 150 5e-044
gb|DT631076.1|DT631076 EST1146007 Normalized pine embryo li... 152 1e-043
gb|BM428180.1|BM428180 NXRV_011_G11_F NXRV (Nsf Xylem Root ... 177 2e-043
gb|BG318531.1|BG318531 NXPV_014_H09_F NXPV (Nsf Xylem Plani... 172 4e-042
gb|BG275942.1|BG275942 NXSI_149_G09_F NXSI (Nsf Xylem Side ... 165 2e-041
gb|BG041023.1|BG041023 NXSI_117_G07_F NXSI (Nsf Xylem Side ... 158 3e-041
gb|BQ635154.1|BQ635154 NXRV077_F08_F NXRV (Nsf Xylem Root w... 150 1e-040
gb|CF390590.1|CF390590 RTDR2_20_C02.b1_A021 Loblolly pine r... 151 1e-040
gb|DR683276.1|DR683276 EST1073352 Normalized pine embryo li... 152 3e-040
gb|BQ634566.1|BQ634566 NXRV070_E09_F NXRV (Nsf Xylem Root w... 164 1e-039
gb|BQ654834.1|BQ654834 NXRV086_C09_F NXRV (Nsf Xylem Root w... 164 1e-039
gb|BG832595.1|BG832595 NXPV_077_A06_F NXPV (Nsf Xylem Plani... 161 8e-039
gb|AW290453.1|AW290453 NXNV027A11F Nsf Xylem Normal wood Ve... 160 1e-038
gb|AW587600.1|AW587600 ST60D05 Pine TriplEx shoot tip libra... 160 1e-038
gb|CD027112.1|CD027112 NXNV027A11 Nsf Xylem Normal wood Ver... 160 1e-038
gb|DR050436.1|DR050436 RTBOR1_23_B01.g1_A029 Roots plus add... 160 3e-038
gb|DR057077.1|DR057077 RTNIT1_2_H11.b1_A029 Roots minus nit... 148 6e-038
gb|BX680268.1|BX680268 BX680268 RS Pinus pinaster cDNA clon... 142 6e-038
gb|BE662613.1|BE662613 ST88/ST88F04 Pine TriplEx shoot tip ... 147 7e-037
gb|DR051809.1|DR051809 RTBOR1_32_B08.g1_A029 Roots plus add... 154 1e-036
gb|CF389681.1|CF389681 RTDR2_5_C08.b1_A021 Loblolly pine ro... 135 2e-036
gb|AW758919.1|AW758919 NXNV_095_B06_F Nsf Xylem Normal wood... 149 3e-035
gb|BQ700731.1|BQ700731 NXRV110_E08_F NXRV (Nsf Xylem Root w... 93 1e-034
gb|DR096650.1|DR096650 STRR1_29_G09.b1_A033 Stem Response R... 147 2e-034
gb|AW985367.1|AW985367 NXNV_134_E10_F Nsf Xylem Normal wood... 146 3e-034
gb|CF396784.1|CF396784 RTDS2_24_D03.b1_A021 Drought-stresse... 126 1e-033
gb|BQ696533.1|BQ696533 NXPV_042_D03_F NXPV (Nsf Xylem Plani... 143 3e-033
gb|CF398021.1|CF398021 RTDS3_22_H08.b1_A022 Drought-stresse... 120 8e-032
gb|DN612922.1|DN612922 EST965972 Subtracted pine embryo lib... 138 1e-031
gb|AW754835.1|AW754835 PC06B04 Pine TriplEx pollen cone lib... 133 2e-030
gb|BG317619.1|BG317619 NXPV_003_G12_F NXPV (Nsf Xylem Plani... 133 4e-030
gb|DR743367.1|DR743367 RTCU1_15_H07.b1_A029 Roots plus adde... 114 2e-029
gb|CF474473.1|CF474473 RTWW2_9_B08.b1_A021 Well-watered lob... 128 7e-029
gb|BX253681.1|BX253681 BX253681 Pinus pinaster differenciat... 127 1e-028
gb|BM903392.1|BM903392 NXRV_042_B05_F NXRV (Nsf Xylem Root ... 127 2e-028
gb|AW984974.1|AW984974 NXNV_118_A06_F Nsf Xylem Normal wood... 126 3e-028
gb|DR096721.1|DR096721 STRR1_29_G09.g1_A033 Stem Response R... 122 4e-027
gb|BF169808.1|BF169808 NXCI_129_H07_F NXCI (Nsf Xylem Compr... 120 2e-026
gb|AW010553.1|AW010553 ST08A02 Pine TriplEx shoot tip libra... 120 3e-026
gb|BF169513.1|BF169513 NXCI_120_E11_F NXCI (Nsf Xylem Compr... 120 3e-026
gb|CO168590.1|CO168590 NDL1_1_D02.b1_A029 Needles control P... 102 2e-024
gb|BE643977.1|BE643977 NXCI_053_A11_F NXCI (Nsf Xylem Compr... 113 3e-024
gb|BQ698232.1|BQ698232 NXPV_065_A07_F NXPV (Nsf Xylem Plani... 112 6e-024
gb|DR387834.1|DR387834 RTHG1_24_A07.g2_A029 Roots plus adde... 92 2e-023
gb|BF169678.1|BF169678 NXCI_126_D02_F NXCI (Nsf Xylem Compr... 110 3e-023
gb|CF396832.1|CF396832 RTDS2_24_D03.g1_A021 Drought-stresse... 64 3e-023
gb|AW226482.1|AW226482 ST82H02 Pine TriplEx shoot tip libra... 107 1e-022
>gb|CF672052.1|CF672052 RTCNT1_61_B09.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_61_B09_A029 3', mRNA sequence
Length = 838
Score = 347 bits (752), Expect(2) = e-127
Identities = 140/204 (68%), Positives = 159/204 (77%)
Frame = +2 / +1
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLC
Sbjct: 217 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLC 396
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGN 628
EWG PATWA +G+SWRTT+DI D W S+ SRADQN+ +AS+AGPGGWNDPDMLEVGN
Sbjct: 397 EWGVDVPATWARQIGSSWRTTEDIEDKWESIVSRADQNNEYASFAGPGGWNDPDMLEVGN 576
Query: 629 GGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQ 808
G M++ EY SHFSIWAL KAPLLIGCDV +M ++T GILSNSEVIAVNQD LGVQGKKV
Sbjct: 577 GHMTDEEYVSHFSIWALMKAPLLIGCDVTSMDKKTYGILSNSEVIAVNQDPLGVQGKKVS 756
Query: 809 SSNGLEVWAGPLSNNRKAVVLWNR 880
LEVWAGPLSNNR AVVLWN+
Sbjct: 757 KQVDLEVWAGPLSNNRVAVVLWNK 828
Score = 215 bits (465), Expect(2) = 7e-070
Identities = 112/202 (55%), Positives = 127/202 (62%)
Frame = -1 / -3
Query: 876 FQRTTAFLLLLSGPAQTSKPLLDCTFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPI 697
F RTTA LL GPA TS+ TFFPCTP+ S TA+TSELL +P V I TSHPI
Sbjct: 824 FHRTTATRLLDRGPAHTSRSTCLLTFFPCTPKGS*LTAITSELLRIP*VFLSIDVTSHPI 645
Query: 696 RSGALASAQMLK*ERYSASDMPPLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAI 517
SGA AQMLK E YS+S M P PTS++SGSFHPPGPA A+ F SARD ML LS++
Sbjct: 644 NSGAFIRAQMLKCETYSSSVMWPFPTSNISGSFHPPGPAKLAYSLF*SARDTMLSHLSSM 465
Query: 516 SSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR* 337
SSVVLQL P+ A VAG PHSH EK + + A IF Y L P+ QLSY R*
Sbjct: 464 SSVVLQLLPICRAHVAGTSTPHSHREKNIGHRVLKSASCIFGYRLSGLEPSL*QLSYLR* 285
Query: 336 SIPQDENVFTSCSSWSSDPGIF 271
S PQ NV S S +PG F
Sbjct: 284 STPQ*ANVSASTCSCPKEPGCF 219
Score = 131 bits (280), Expect(2) = e-127
Identities = 53/75 (70%), Positives = 61/75 (81%)
Frame = +2 / +1
Query: 50 QTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFPSGIKALADYVHAKGLK 229
+TADALV++GL+KLGY YV IDDCWAE +RD G VA+ FPSGIKALADYVH KGLK
Sbjct: 1 ETADALVSSGLSKLGYTYVXIDDCWAEPNRDQNGRLVASASKFPSGIKALADYVHNKGLK 180
Query: 230 LGIYSDAGTRTCSQK 274
LGIYSDAG TC ++
Sbjct: 181 LGIYSDAGYYTCQKQ 225
Score = 99.1 bits (210), Expect(2) = 1e-031
Identities = 56/203 (27%), Positives = 95/203 (46%)
Frame = -3 / -2
Query: 877 VPENHGLPVVAERPSPNLQAIAGLHFLSLHA*AILVHGDDFRVAEYXXXXXXXXXHVAPD 698
+P NH VV R P L+ HF L++ IL+ ++ RV ++ +
Sbjct: 825 IP*NHSYTVVR*RTCPYLEVYLLAHFFPLYSQRILIDCNNLRVT*NSVSLFVHRCYITSN 646
Query: 697 QKRSLGERPDAEVRAVLRLGHAAVAHLKHVRIVPPARSGVGSPPVVLVCTRRHAAPVVGD 518
Q L + PDAE+ + + H A++ +H+ I+P + +VL+CT A P+V +
Sbjct: 645 Q*WCLHQSPDAEM*NIFLISHVAISDFQHIWIIPSTWTSKTCIFIVLICTGYDAFPLVLN 466
Query: 517 IIGRSPAVPHAACPGSRVLPPPFAQREEDALPIRLHSVAHLRIPLHDAPAGVVAVVVFQI 338
+ PA + P R + PF Q +E P + HL +P A +V V++F+I
Sbjct: 465 VFCCPPAASNLPSPRGRNIHSPFTQGKEYWPPGSQKCIMHLWVPAFRLRAIIVTVIIFEI 286
Query: 337 IDTPGRECLHVLLLVVK*PWHFL 269
I P + + + LL+ + W L
Sbjct: 285 IHAPISKRIGIYLLMSQGTWLLL 217
Score = 69.8 bits (146), Expect(2) = 7e-070
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = -3 / -2
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++ + LD RG+ S CN++ +++ +RL PAIIY I V QLR+T
Sbjct: 204 PSI*IYSQFEALVVHIISKSLDTRGKL*STCNQSPILITIRLCPAIIYXYIGVPQLRETT 25
Query: 73 VDQRISC 53
Q ISC
Sbjct: 24 *YQSISC 4
Score = 58.8 bits (122), Expect(2) = 1e-031
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = -1 / -3
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAV 52
CT*SA AL+PEG AT LP+*S SAQQSS+ T P+ RP+ T ASAV
Sbjct: 164 CT*SARALIPEGNFEALATNLPF*SRLGSAQQSSIXT*VYPNLERPLDTKASAV 3
>gb|CX653143.1|CX653143 COLD1_63_E01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_E01_A029 5', mRNA sequence
Length = 852
Score = 441 bits (957), Expect = e-123
Identities = 179/269 (66%), Positives = 207/269 (76%)
Frame = +2 / +3
Query: 140 DYQGSFVANRQTFPSGIKALADYVHAKGLKLGIYSDAGTRTCSQKMPGSLDHEEQDVKTF 319
D G VA + TF SGIKALADYVH+KGLKLGIYSDAG RTCS K PGSL +E+ D TF
Sbjct: 3 DKNGRLVAKKSTFSSGIKALADYVHSKGLKLGIYSDAGFRTCSGKQPGSLGYEQIDADTF 182
Query: 320 SSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLCEWGRQNPATWAGGMGNS 499
+ WG+DYLKYDNCN RY +M +A+ G IF+SLCEWGR +PATW +GNS
Sbjct: 183 AEWGVDYLKYDNCNTDRSKPELRYPRMRDALLRTGHPIFYSLCEWGRDHPATWGAKVGNS 362
Query: 500 WRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWAL 679
WRTT DI ++W S+ SR D NDRWA YAGPGGWNDPDMLEVGNG +S EYRSHFS+WAL
Sbjct: 363 WRTTQDINNSWISIASRVDLNDRWAHYAGPGGWNDPDMLEVGNGKLSREEYRSHFSLWAL 542
Query: 680 AKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRK 859
KAPLLIGCDVR+MS + IL+N+EVIAVNQD LGVQGKKV S++ LEVWAGPLSNNR
Sbjct: 543 MKAPLLIGCDVRSMSSGIVEILNNAEVIAVNQDPLGVQGKKVYSNDNLEVWAGPLSNNRM 722
Query: 860 AVVLWNRQGYQATITAQWSSIGLPSSTAV 946
V+L NR+ +A+ITA+W IGL SS V
Sbjct: 723 VVILLNRRESRASITAKWEDIGLESSHEV 809
Score = 252 bits (544), Expect = 5e-066
Identities = 134/267 (50%), Positives = 158/267 (59%)
Frame = -1 / -3
Query: 945 TAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPCTPRLSWFT 766
T+ E+ P+ H AV+ A F R T LL GPA TS+ L TF PCTP S T
Sbjct: 808 TSWEDSRPISSHLAVIEALDSLLFNRITTIRLLDKGPAHTSRLSLL*TFLPCTPNGS*LT 629
Query: 765 AMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSMSGSFHPPG 586
A+TS LL + + LI TSHPI +GA SAQ LK +RYS+ P PTS+MSGSFHPPG
Sbjct: 628 AITSALLRISTIPELIDLTSHPINNGAFISAQRLKCDRYSSLLNLPFPTSNMSGSFHPPG 449
Query: 585 PA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIA 406
PA* AHLSF S R+ ML QL +S VVLQLFP QVAG LPHSH+E + P + A
Sbjct: 448 PA*CAHLSFRSTREAMLIQLLLMSCVVLQLFPTLAPQVAG*SLPHSHNE*NIGCPVLRSA 269
Query: 405 LLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIFWLHVRVXXXXXXXXX 226
LI Y S LL + LQLSYFR*S P NV S S+ ++PG F VR
Sbjct: 268 SLILGYRSSGLLRSVLQLSYFR*STPHSANVSASICSYPNEPGCFPEQVRNPASEYIPSL 89
Query: 225 XXXACT*SASALMPEGKVCLFATKLPW 145
CT*SA AL+P+ V FAT LP+
Sbjct: 88 SPLLCT*SARALIPDENVDFFATNLPF 8
Score = 81.3 bits (171), Expect(2) = 3e-024
Identities = 42/137 (30%), Positives = 73/137 (53%)
Frame = -3 / -2
Query: 853 VVAERPSPNLQAIAGLHFLSLHA*AILVHGDDFRVAEYXXXXXXXXXHVAPDQKRSLGER 674
+V R P LQ + + FL+L++ IL+ + + E H+ P Q+ L +
Sbjct: 716 IVG*RTCPYLQIVIAVDFLALYSQWILIDCNHLCIVEDLHNPRTHRSHITPYQQWCLHQC 537
Query: 673 PDAEVRAVLRLGHAAVAHLKHVRIVPPARSGVGSPPVVLVCTRRHAAPVVGDIIGRSPAV 494
P+AE+ V A+++L+HVRI+P S + P V+ + + +A P V +++ R PA+
Sbjct: 536 PEAEM*PVFFSA*FAISYLQHVRIIPSTWSCIMCPSVIQIHSGSYANPTVVNVLCRPPAI 357
Query: 493 PHAACPGSRVLPPPFAQ 443
+ PGSR++ PF Q
Sbjct: 356 SNFGSPGSRMISSPFTQ 306
Score = 51.5 bits (106), Expect(2) = 3e-024
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = -3 / -2
Query: 406 VAHLRIPLHDAPAGVVAVVVFQIIDTPGRECLHVLLLVVK*PWHFLAARPCPSIAVDAQL 227
+ H +P A + +++F II+ P +C+ + LLV +* W F P I + Q
Sbjct: 269 IPHSWVPQFWFAAISITIIIF*IINPPFSKCICIYLLVSQ*AWLFP*TGTEPGI*IYPQF 90
Query: 226 EPLGVHVVRERLDARGEGLSVCNEASLVV 140
E VH++ + LD R E CN +S+ +
Sbjct: 89 ESFAVHIISKGLDPR*EC*FFCN*SSIFI 3
>gb|DR057149.1|DR057149 RTNIT1_2_H11.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_2_H11_A029 5', mRNA sequence
Length = 680
Score = 424 bits (921), Expect = e-118
Identities = 161/224 (71%), Positives = 188/224 (83%)
Frame = +2 / +1
Query: 53 TADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFPSGIKALADYVHAKGLKL 232
TADA+V+TGL+K+GY+YVNIDDCW E +RD QG+ V TFPSG+KALADYVH+KGLKL
Sbjct: 7 TADAMVSTGLSKVGYKYVNIDDCWGEQNRDAQGNLVPKASTFPSGMKALADYVHSKGLKL 186
Query: 233 GIYSDAGTRTCSQKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAM 412
GIYSDAG+ TCS MPGSL HEEQD +TF+SWGIDYLKYDNCN+ G ERY KMS A+
Sbjct: 187 GIYSDAGSNTCSNTMPGSLGHEEQDARTFASWGIDYLKYDNCNNGGIYPKERYPKMSEAL 366
Query: 413 KTYGKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPG 592
+ G+ IF+S+CEWG+QNPATWA + NSWRTT DI D W S+TS ADQN++WA+YAGPG
Sbjct: 367 RKTGRPIFYSMCEWGQQNPATWAPNIANSWRTTGDIQDKWDSITSLADQNNQWAAYAGPG 546
Query: 593 GWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRAMS 724
GWNDPDMLEVGNG M+ EYRSHFSIWAL KAPLLIGCD+R+ S
Sbjct: 547 GWNDPDMLEVGNGNMNTEEYRSHFSIWALMKAPLLIGCDIRSAS 678
Score = 193 bits (415), Expect(2) = 2e-060
Identities = 92/150 (61%), Positives = 103/150 (68%)
Frame = -1 / -1
Query: 708 SHPIRSGALASAQMLK*ERYSASDMPPLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQ 529
SHPI GA AQMLK +RYS+ + P PTS+MSGSFHPPGPA AH F SARDVML
Sbjct: 662 SHPISRGAFIKAQMLKCDRYSSVFILPFPTSNMSGSFHPPGPAYAAHWLF*SARDVMLSH 483
Query: 528 LSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLS 349
LS +S VVLQLF + AQVAGFC PHSH E + P A LIF YLS+ +P LQLS
Sbjct: 482 LS*MSPVVLQLFAILGAQVAGFC*PHSHIE*NIGRPVFLRASLIFGYLSLG*IPPLLQLS 303
Query: 348 YFR*SIPQDENVFTSCSSWSSDPGIFWLHV 259
YF+*SIP D NV SCSS +PGI LHV
Sbjct: 302 YFK*SIPHDANVLASCSSCPREPGIVLLHV 213
Score = 126 bits (270), Expect = 3e-028
Identities = 73/220 (33%), Positives = 114/220 (51%)
Frame = -3 / -3
Query: 709 VAPDQKRSLGERPDAEVRAVLRLGHAAVAHLKHVRIVPPARSGVGSPPVVLVCTRRHAAP 530
+ +Q+ L P+AEV + H A+++L+HVRIVP R + P V+L+ R A P
Sbjct: 663 ITSNQQGCLH*SPNAEV*PIFLSVHIAISNLQHVRIVPSTRPCICCPLVILIS*RCDAIP 484
Query: 529 VVGDIIGRSPAVPHAACPGSRVLPPPFAQREEDALPIRLHSVAHLRIPLHDAPAGVVAVV 350
+ ++ SP V + CP R+L PF E S H + L ++A++
Sbjct: 483 FILNVSCSSPTVCYIGCPSCRILLTPFTH*IEYRAACLSKSFTHFWVSLLRINTTIIAII 304
Query: 349 VFQIIDTPGRECLHVLLLVVK*PWHFLAARPCPSIAVDAQLEPLGVHVVRERLDARGEGL 170
+FQI+ P + +LLLV K H + A SI + ++LE L V+VV + L AR +
Sbjct: 303 IFQIVYPP*CKRSSILLLVSKGTRHSITACIGSSIRIYSKLESLRVYVVCQCLHARRKC* 124
Query: 169 SVCNEASLVVPVRLRPAIIYVDILVAQLRQTGVDQRISCL 50
S N +L + V L P +IY+ I ++ LR + D ISC+
Sbjct: 123 SFRN*ITLSISVLLTPTVIYIHIFISDLR*SSGDHCISCI 4
Score = 61.1 bits (127), Expect(2) = 2e-060
Identities = 32/54 (59%), Positives = 35/54 (64%)
Frame = -1 / -1
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAV 52
CT*SASA MPEG V T+LP S S QQSS+ TY P+F PV T ASAV
Sbjct: 167 CT*SASAFMPEGNVEALGTRLP*ASRFCSPQQSSIFTYLYPTFDNPVETIASAV 6
>gb|CO197758.1|CO197758 GEO1_8_H04.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_8_H04_A029 5', mRNA sequence
Length = 682
Score = 424 bits (920), Expect = e-118
Identities = 160/226 (70%), Positives = 189/226 (83%)
Frame = +2 / +3
Query: 59 DALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFPSGIKALADYVHAKGLKLGI 238
DA+V+TGL+K+GY+YVNIDDCW E +RD QG+ V TFPSG+KALADYVH+KGLKLGI
Sbjct: 3 DAMVSTGLSKVGYKYVNIDDCWGEQNRDAQGNLVPKASTFPSGMKALADYVHSKGLKLGI 182
Query: 239 YSDAGTRTCSQKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKT 418
YSDAG+ TCS MPGSL HEEQD +TF+SWGIDYLKYDNCN+ G ERY KMS A++
Sbjct: 183 YSDAGSNTCSNTMPGSLGHEEQDARTFASWGIDYLKYDNCNNGGIYPKERYPKMSEALRK 362
Query: 419 YGKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGW 598
G+ IF+S+CEWG+QNPATWA + NSWRTT DI D W S+TS ADQN++WA+YAGPGGW
Sbjct: 363 TGRPIFYSMCEWGQQNPATWAPNIANSWRTTGDIQDKWDSITSLADQNNQWAAYAGPGGW 542
Query: 599 NDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTM 736
NDPDMLEVGNG M+ EYRSHFSIWAL KAPLLIGCD+R+ S +T+
Sbjct: 543 NDPDMLEVGNGNMNTEEYRSHFSIWALMKAPLLIGCDIRSASSETI 680
Score = 193 bits (415), Expect(2) = 3e-059
Identities = 92/150 (61%), Positives = 103/150 (68%)
Frame = -1 / -1
Query: 708 SHPIRSGALASAQMLK*ERYSASDMPPLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQ 529
SHPI GA AQMLK +RYS+ + P PTS+MSGSFHPPGPA AH F SARDVML
Sbjct: 652 SHPISRGAFIKAQMLKCDRYSSVFILPFPTSNMSGSFHPPGPAYAAHWLF*SARDVMLSH 473
Query: 528 LSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLS 349
LS +S VVLQLF + AQVAGFC PHSH E + P A LIF YLS+ +P LQLS
Sbjct: 472 LS*MSPVVLQLFAILGAQVAGFC*PHSHIE*NIGRPVFLRASLIFGYLSLG*IPPLLQLS 293
Query: 348 YFR*SIPQDENVFTSCSSWSSDPGIFWLHV 259
YF+*SIP D NV SCSS +PGI LHV
Sbjct: 292 YFK*SIPHDANVLASCSSCPREPGIVLLHV 203
Score = 119 bits (255), Expect = 4e-026
Identities = 71/217 (32%), Positives = 111/217 (51%)
Frame = -3 / -3
Query: 709 VAPDQKRSLGERPDAEVRAVLRLGHAAVAHLKHVRIVPPARSGVGSPPVVLVCTRRHAAP 530
+ +Q+ L P+AEV + H A+++L+HVRIVP R + P V+L+ R A P
Sbjct: 653 ITSNQQGCLH*SPNAEV*PIFLSVHIAISNLQHVRIVPSTRPCICCPLVILIS*RCDAIP 474
Query: 529 VVGDIIGRSPAVPHAACPGSRVLPPPFAQREEDALPIRLHSVAHLRIPLHDAPAGVVAVV 350
+ ++ SP V + CP R+L PF E S H + L ++A++
Sbjct: 473 FILNVSCSSPTVCYIGCPSCRILLTPFTH*IEYRAACLSKSFTHFWVSLLRINTTIIAII 294
Query: 349 VFQIIDTPGRECLHVLLLVVK*PWHFLAARPCPSIAVDAQLEPLGVHVVRERLDARGEGL 170
+FQI+ P + +LLLV K H + A SI + ++LE L V+VV + L AR +
Sbjct: 293 IFQIVYPP*CKRSSILLLVSKGTRHSITACIGSSIRIYSKLESLRVYVVCQCLHARRKC* 114
Query: 169 SVCNEASLVVPVRLRPAIIYVDILVAQLRQTGVDQRI 59
S N +L + V L P +IY+ I ++ LR + D I
Sbjct: 113 SFRN*ITLSISVLLTPTVIYIHIFISDLR*SSGDHCI 3
Score = 57.4 bits (119), Expect(2) = 3e-059
Identities = 30/52 (57%), Positives = 33/52 (63%)
Frame = -1 / -1
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSAS 58
CT*SASA MPEG V T+LP S S QQSS+ TY P+F PV T AS
Sbjct: 157 CT*SASAFMPEGNVEALGTRLP*ASRFCSPQQSSIFTYLYPTFDNPVETIAS 2
>gb|CF672123.1|CF672123 RTCNT1_61_B09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_61_B09_A029 5', mRNA sequence
Length = 760
Score = 267 bits (577), Expect(2) = e-110
Identities = 105/161 (65%), Positives = 123/161 (76%)
Frame = +2 / +3
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLC
Sbjct: 276 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLC 455
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGN 628
EWG PATWA +G+SWRTT+DI D W S+ SRADQN+ +AS+AGPGGWNDPDMLEVGN
Sbjct: 456 EWGVDVPATWARQIGSSWRTTEDIEDKWESIVSRADQNNEYASFAGPGGWNDPDMLEVGN 635
Query: 629 GGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSN 751
G M++ EY SHFSIWAL KAPLLIGCDV +M ++T GILSN
Sbjct: 636 GHMTDEEYVSHFSIWALMKAPLLIGCDVTSMDKKTYGILSN 758
Score = 167 bits (359), Expect(2) = 8e-058
Identities = 88/161 (54%), Positives = 100/161 (62%)
Frame = -1 / -1
Query: 753 ELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSMSGSFHPPGPA*E 574
ELL +P V I TSHPI SGA AQMLK E YS+S M P PTS++SGSFHPPGPA
Sbjct: 760 ELLRIP*VFLSIDVTSHPINSGAFIRAQMLKCETYSSSVMWPFPTSNISGSFHPPGPAKL 581
Query: 573 AHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIF 394
A+ F SARD ML LS++SSVVLQL P+ A VAG PHSH EK + + A IF
Sbjct: 580 AYSLF*SARDTMLSHLSSMSSVVLQLLPICRAHVAGTSTPHSHREKNIGHRVLKSASCIF 401
Query: 393 VYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIF 271
Y L P+ QLSY R*S PQ NV S S +PG F
Sbjct: 400 GYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCSCPKEPGCF 278
Score = 154 bits (331), Expect(2) = e-110
Identities = 61/91 (67%), Positives = 73/91 (80%)
Frame = +2 / +3
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
N + +GC INE +I++TADALV++GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 12 NMLDFYGCNINENIIRETADALVSSGLSKLGYTYVNIDDCWAEPNRDQNGRLVASASKFP 191
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 192 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 284
Score = 78.0 bits (164), Expect(2) = 8e-058
Identities = 36/78 (46%), Positives = 51/78 (65%)
Frame = -3 / -3
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++ + LD RG+ S CN++ +++ +RL PAIIY+ I V QLR+T
Sbjct: 263 PSI*IYSQFEALVVHIISKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIGVPQLRETT 84
Query: 73 VDQRISCLLDEFLVDPAA 20
Q ISC L+D AA
Sbjct: 83 *YQSISCFSYNILIDVAA 30
Score = 78.0 bits (164), Expect(2) = 3e-028
Identities = 40/139 (28%), Positives = 69/139 (49%)
Frame = -3 / -3
Query: 685 LGERPDAEVRAVLRLGHAAVAHLKHVRIVPPARSGVGSPPVVLVCTRRHAAPVVGDIIGR 506
L + PDAE+ + + H A++ +H+ I+P + +VL+CT A P+V ++
Sbjct: 692 LHQSPDAEM*NIFLISHVAISDFQHIWIIPSTWTSKTCIFIVLICTGYDAFPLVLNVFCC 513
Query: 505 SPAVPHAACPGSRVLPPPFAQREEDALPIRLHSVAHLRIPLHDAPAGVVAVVVFQIIDTP 326
PA + P R + PF Q +E P + HL +P A +V V++F+II P
Sbjct: 512 PPAASNLPSPRGRNIHSPFTQGKEYWPPGSQKCIMHLWVPAFRLRAIIVTVIIFEIIHAP 333
Query: 325 GRECLHVLLLVVK*PWHFL 269
+ + + LL+ + W L
Sbjct: 332 ISKRIGIYLLMSQGTWLLL 276
Score = 68.4 bits (143), Expect(2) = 3e-028
Identities = 36/65 (55%), Positives = 43/65 (66%)
Frame = -1 / -1
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFS 34
CT*SA AL+PEG AT LP+*S SAQQSS+ T P+ RP+ T ASAV + FS
Sbjct: 223 CT*SARALIPEGNFEALATNLPF*SRLGSAQQSSIFT*VYPNLERPLDTKASAVSRIIFS 44
Query: 33 LIPQP 19
L+ QP
Sbjct: 43 LMLQP 29
>gb|DR387760.1|DR387760 RTHG1_24_A07.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_A07_A029 3', mRNA sequence
Length = 775
Score = 347 bits (752), Expect(2) = e-110
Identities = 140/204 (68%), Positives = 159/204 (77%)
Frame = +2 / -1
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLC
Sbjct: 625 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLC 446
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGN 628
EWG PATWA +G+SWRTT+DI D W S+ SRADQN+ +AS+AGPGGWNDPDMLEVGN
Sbjct: 445 EWGVDVPATWARQIGSSWRTTEDIEDKWESIVSRADQNNEYASFAGPGGWNDPDMLEVGN 266
Query: 629 GGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQ 808
G M++ EY SHFSIWAL KAPLLIGCDV +M ++T GILSNSEVIAVNQD LGVQGKKV
Sbjct: 265 GHMTDEEYVSHFSIWALMKAPLLIGCDVTSMDKKTYGILSNSEVIAVNQDPLGVQGKKVS 86
Query: 809 SSNGLEVWAGPLSNNRKAVVLWNR 880
LEVWAGPLSNNR AVVLWN+
Sbjct: 85 KQVDLEVWAGPLSNNRVAVVLWNK 14
Score = 217 bits (468), Expect(2) = 2e-061
Identities = 113/202 (55%), Positives = 127/202 (62%)
Frame = -1 / +3
Query: 876 FQRTTAFLLLLSGPAQTSKPLLDCTFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPI 697
F RTTA LL GPA TS+ TFFPCTPR S TA+TSELL +P V I TSHPI
Sbjct: 18 FHRTTATRLLDRGPAHTSRSTCLLTFFPCTPRGS*LTAITSELLRIP*VFLSIDVTSHPI 197
Query: 696 RSGALASAQMLK*ERYSASDMPPLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAI 517
SGA AQMLK E YS+S M P PTS++SGSFHPPGPA A+ F SARD ML LS++
Sbjct: 198 NSGAFIRAQMLKCETYSSSVM*PFPTSNISGSFHPPGPAKLAYSLF*SARDTMLSHLSSM 377
Query: 516 SSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR* 337
SSVVLQL P+ A VAG PHSH EK + + A IF Y L P+ QLSY R*
Sbjct: 378 SSVVLQLLPICRAHVAGTSTPHSHREKNIGHRVLKSASCIFGYRLSGLEPSL*QLSYLR* 557
Query: 336 SIPQDENVFTSCSSWSSDPGIF 271
S PQ NV S S +PG F
Sbjct: 558 STPQ*ANVSASTCSCPKEPGCF 623
Score = 72.5 bits (152), Expect(2) = e-110
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +2 / -1
Query: 149 GSFVANRQTFPSGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
G VA+ FPSGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 742 GRLVASASKFPSGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 617
Score = 40.5 bits (82), Expect(2) = 2e-061
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = -3 / +2
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASL 146
PSI + +Q E L VH++R+ LD RG+ S CN++ +
Sbjct: 638 PSI*IYSQFEALVVHIIRKSLDTRGKL*STCNQSPI 745
>gb|DR162592.1|DR162592 RTFE1_18_G09.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_18_G09_A029 5', mRNA sequence
Length = 726
Score = 343 bits (743), Expect(2) = e-109
Identities = 137/202 (67%), Positives = 156/202 (77%)
Frame = +2 / +1
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ + IF+SLC
Sbjct: 121 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRRPIFYSLC 300
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGN 628
EWG PATWA +G+SWRTT DI D W S+ SRAD+N+ +AS+AGPGGWNDPDMLEVGN
Sbjct: 301 EWGLDVPATWARQIGSSWRTTQDIEDKWESIVSRADENNEYASFAGPGGWNDPDMLEVGN 480
Query: 629 GGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQ 808
G M+ EY SHFSIWAL KAPLLIGCDV +M ++T GILSNSEVIAVNQD LGVQGKKV
Sbjct: 481 GHMTAEEYGSHFSIWALMKAPLLIGCDVTSMKKKTYGILSNSEVIAVNQDPLGVQGKKVS 660
Query: 809 SSNGLEVWAGPLSNNRKAVVLW 874
LEVWAGPLSNNR AVVLW
Sbjct: 661 KQGDLEVWAGPLSNNRVAVVLW 726
Score = 202 bits (436), Expect(2) = 3e-056
Identities = 107/200 (53%), Positives = 124/200 (62%)
Frame = -1 / -2
Query: 870 RTTAFLLLLSGPAQTSKPLLDCTFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRS 691
RTTA LL GPA TS+ TFFPCTP+ S TA+TSELL +P V + I TSHPI
Sbjct: 722 RTTATRLLDRGPAHTSRSPCLLTFFPCTPKGS*LTAITSELLRIP*VFFFIDVTSHPINR 543
Query: 690 GALASAQMLK*ERYSASDMPPLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISS 511
GA AQMLK E YS++ M P PTS++SGSFHPPGPA A+ F SARD ML LS++S
Sbjct: 542 GAFIRAQMLKCEPYSSAVMWPFPTSNISGSFHPPGPAKLAYSLFSSARDTMLSHLSSMSC 363
Query: 510 VVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR*SI 331
VVLQL P+ A VAG PHSH E + + A IF Y L P+ QLSY R*S
Sbjct: 362 VVLQLLPICRAHVAGTSNPHSHRE*NIGRRVLKSASCIFGYRLSGLEPSL*QLSYLR*ST 183
Query: 330 PQDENVFTSCSSWSSDPGIF 271
PQ NV S S +PG F
Sbjct: 182 PQ*ANVSASTCSCPKEPGCF 123
Score = 72.5 bits (152), Expect(2) = e-109
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +2 / +1
Query: 149 GSFVANRQTFPSGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
G VA+ FPSGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 4 GRLVASASKFPSGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 129
Score = 37.7 bits (76), Expect(2) = 3e-056
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3 / -1
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASL 146
PSI + +Q E L VH++ + LD RG+ S CN++ +
Sbjct: 108 PSI*IYSQFEALVVHIISKSLDTRGKL*STCNQSPI 1
>gb|DR016879.1|DR016879 STRS1_12_F01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_12_F01_A034 5', mRNA sequence
Length = 835
Score = 366 bits (794), Expect(2) = e-105
Identities = 149/230 (64%), Positives = 170/230 (73%)
Frame = +2 / +1
Query: 305 DVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLCEWGRQNPATWAG 484
D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLCEWG PATWA
Sbjct: 7 DADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLCEWGVDVPATWAR 186
Query: 485 GMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHF 664
+G+SWRTT+DI D W S+ SRADQN+ +AS+AGPGGWNDPDMLEVGNG M++ EY SHF
Sbjct: 187 QIGSSWRTTEDIEDKWESIVSRADQNNEYASFAGPGGWNDPDMLEVGNGHMTDEEYVSHF 366
Query: 665 SIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPL 844
SIWAL KAPLLIGCDV +M ++T GILSNSEVIAVNQD LGVQGKKV LEVWAGPL
Sbjct: 367 SIWALMKAPLLIGCDVTSMDKKTYGILSNSEVIAVNQDPLGVQGKKVSKQVDLEVWAGPL 546
Query: 845 SNNRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFSAQGQ 994
SNNR AVVLWN+ +ATITA+W IGL S V R+LW H A Q
Sbjct: 547 SNNRVAVVLWNKSNSRATITAKWEDIGLNPSAVVRVRNLWRHRELEANHQ 696
Score = 230 bits (497), Expect(2) = 1e-060
Identities = 121/230 (52%), Positives = 140/230 (60%)
Frame = -1 / -3
Query: 993 WP*AENDECAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPL 814
W A N C H+ +T E +P+ H AV+VA F RTTA LL GPA TS+
Sbjct: 695 W*FASNSLCLHKFLTLTTAEGFNPISSHLAVIVALELLLFHRTTATRLLDRGPAHTSRST 516
Query: 813 LDCTFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDM 634
TFFPCTP+ S TA+TSELL +P V I TSHPI SGA AQMLK E YS+S M
Sbjct: 515 CLLTFFPCTPKGS*LTAITSELLRIP*VFLSIDVTSHPINSGAFIRAQMLKCETYSSSVM 336
Query: 633 PPLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLP 454
P PTS++SGSFHPPGPA A+ F SARD ML LS++SSVVLQL P+ A VAG P
Sbjct: 335 *PFPTSNISGSFHPPGPAKLAYSLF*SARDTMLSHLSSMSSVVLQLLPICRAHVAGTSTP 156
Query: 453 HSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTS 304
HSH EK + + A IF Y L P+ QLSY R*S PQ NV S
Sbjct: 155 HSHREKNIGHRVLKSASCIFGYRLSGLEPSL*QLSYLR*STPQ*ANVSAS 6
Score = 38.2 bits (77), Expect(2) = e-105
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 986 QGQLSASVPPHDCKMYVLT 1042
QG L+ASV PH C+MYVLT
Sbjct: 694 QGSLTASVKPHGCRMYVLT 750
Score = 24.4 bits (47), Expect(2) = 1e-060
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 1041 VKTYILQS*GGTEADSWP 988
VKTYIL *G TEA P
Sbjct: 749 VKTYILHP*GFTEAVRLP 696
>gb|DR079527.1|DR079527 RTFEPL1_11_G08.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_11_G08_A029 5', mRNA sequence
Length = 794
Score = 368 bits (797), Expect(2) = e-105
Identities = 150/233 (64%), Positives = 172/233 (73%)
Frame = +2 / +2
Query: 287 LDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLCEWGRQN 466
L E+ D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLCEWG
Sbjct: 5 LGTEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLCEWGVDV 184
Query: 467 PATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEA 646
PATWA +G+SWRTT+DI D W S+ SRADQN+ +AS+AGPGGWNDPDMLEVGNG M++
Sbjct: 185 PATWARQIGSSWRTTEDIEDKWESIVSRADQNNEYASFAGPGGWNDPDMLEVGNGHMTDE 364
Query: 647 EYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLE 826
EY SHFSIWAL KAPLLIGCDV +M ++T GILSNSEVIAVNQD LGVQGKKV LE
Sbjct: 365 EYVSHFSIWALMKAPLLIGCDVTSMDKKTYGILSNSEVIAVNQDPLGVQGKKVSKQVDLE 544
Query: 827 VWAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFSA 985
VWAGPLSNNR AVVLWN+ +ATITA+W IGL S V R+LW H A
Sbjct: 545 VWAGPLSNNRVAVVLWNKSNSRATITAKWEDIGLNPSAVVRVRNLWRHRELEA 703
Score = 230 bits (496), Expect(2) = 1e-060
Identities = 121/230 (52%), Positives = 140/230 (60%)
Frame = -1 / -3
Query: 984 AENDECAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDC 805
A N C H+ +T E +P+ H AV+VA F RTTA LL GPA TS+
Sbjct: 702 ASNSLCLHKFLTLTTAEGFNPISSHLAVIVALELLLFHRTTATRLLDRGPAHTSRSTCLL 523
Query: 804 TFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPL 625
TFFPCTP+ S TA+TSELL +P V I TSHPI SGA AQMLK E YS+S M P
Sbjct: 522 TFFPCTPKGS*LTAITSELLRIP*VFLSIDVTSHPINSGAFIRAQMLKCETYSSSVMWPF 343
Query: 624 PTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSH 445
PTS++SGSFHPPGPA A+ F SARD ML LS++SSVVLQL P+ A VAG PHSH
Sbjct: 342 PTSNISGSFHPPGPAKLAYSLF*SARDTMLSHLSSMSSVVLQLLPICRAHVAGTSTPHSH 163
Query: 444 SEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSS 295
EK + + A IF Y L P+ QLSY R*S PQ NV S S
Sbjct: 162 REKNIGHRVLKSASCIFGYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCS 13
Score = 36.8 bits (74), Expect(2) = e-105
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 986 QGQLSASVPPHDCKMYVLT 1042
+G L+ASV PH C+MYVLT
Sbjct: 710 EGSLTASVKPHGCRMYVLT 766
Score = 24.4 bits (47), Expect(2) = 1e-060
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 1041 VKTYILQS*GGTEADSWP 988
VKTYIL *G TEA P
Sbjct: 765 VKTYILHP*GFTEAVRLP 712
>gb|BX249201.1|BX249201 BX249201 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP021B11, mRNA sequence
Length = 708
Score = 281 bits (608), Expect(2) = e-105
Identities = 111/170 (65%), Positives = 130/170 (76%)
Frame = +2 / +1
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ + IF+SLC
Sbjct: 196 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRRPIFYSLC 375
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGN 628
EWG PATWA +G+SWRTT DI D W S+ SRAD+N+ +AS+AGPGGWNDPDMLEVGN
Sbjct: 376 EWGLDVPATWARQIGSSWRTTQDIEDKWESIVSRADENNEYASFAGPGGWNDPDMLEVGN 555
Query: 629 GGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQD 778
G M+ EY SHFSIWAL KAPLLIGCDV +M ++T GILSNSE IAVNQD
Sbjct: 556 GQMTAEEYGSHFSIWALMKAPLLIGCDVTSMEKKTYGILSNSEGIAVNQD 705
Score = 161 bits (346), Expect(2) = 6e-048
Identities = 86/166 (51%), Positives = 102/166 (61%)
Frame = -1 / -2
Query: 768 TAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSMSGSFHPP 589
TA+ SELL +P V + I TSHPI GA AQMLK E YS++ + P PTS++SGSFHPP
Sbjct: 695 TAIPSELLRIP*VFFSIDVTSHPINKGAFIRAQMLKCEPYSSAVIWPFPTSNISGSFHPP 516
Query: 588 GPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFI 409
GPA A+ F SARD ML LS++S VVLQL P+ A VAG PHSH E + +
Sbjct: 515 GPAKLAYSLFSSARDTMLSHLSSMSCVVLQLLPICRAHVAGTSNPHSHRE*NIGRRVLKS 336
Query: 408 ALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIF 271
A IF Y L P+ QLSY R*S PQ NV S S +PG F
Sbjct: 335 ASCIFGYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCSCPKEPGCF 198
Score = 121 bits (258), Expect(2) = e-105
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +2 / +1
Query: 71 NTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFPSGIKALADYVHAKGLKLGIYSDA 250
+ GL+KLGY YVNIDDCWAE +RD G VA+ FPSGIKALADYVH+KGLKLGIYSDA
Sbjct: 1 SNGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFPSGIKALADYVHSKGLKLGIYSDA 180
Query: 251 GTRTCSQK 274
G TC ++
Sbjct: 181 GYYTCQKQ 204
Score = 51.0 bits (105), Expect(2) = 6e-048
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = -1 / -2
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARP 76
CT*SA AL+PEG AT LP+*S SAQQSS+ T P+ RP
Sbjct: 143 CT*SARALIPEGNFEALATNLPF*SRLGSAQQSSIFT*IYPNLERP 6
>gb|DT631219.1|DT631219 EST1146150 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF632 3' end, mRNA sequence
Length = 857
Score = 228 bits (492), Expect(2) = e-102
Identities = 94/124 (75%), Positives = 105/124 (84%)
Frame = +2 / +2
Query: 536 SMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVR 715
S+ SRADQN+ +AS+AGPGGWNDPDMLEVGNG M++ EY SHFSIWAL KAPLLIGCDV
Sbjct: 485 SIVSRADQNNEYASFAGPGGWNDPDMLEVGNGHMTDEEYVSHFSIWALMKAPLLIGCDVT 664
Query: 716 AMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRKAVVLWNRQGYQA 895
+M ++T GILSNSEVIAVNQD LGVQGKKV LEVWAGPLSNNR AVVLWN+ +A
Sbjct: 665 SMDKKTYGILSNSEVIAVNQDPLGVQGKKVSKQVDLEVWAGPLSNNRVAVVLWNKSNSRA 844
Query: 896 TITA 907
TITA
Sbjct: 845 TITA 856
Score = 168 bits (361), Expect(2) = e-102
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = +2 / +1
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNH+GC INE +I++TADALV++GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 193 NSWNHYGCNINENIIRETADALVSSGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFP 372
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 373 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 465
Score = 147 bits (315), Expect(2) = 2e-054
Identities = 75/124 (60%), Positives = 83/124 (66%)
Frame = -1 / -3
Query: 906 AVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPCTPRLSWFTAMTSELLSMPIVC 727
AV+VA F RTTA LL GPA TS+ TFFPCTPR S TA+TSELL +P V
Sbjct: 855 AVIVALELLLFHRTTATRLLDRGPAHTSRSTCLLTFFPCTPRGS*LTAITSELLRIP*VF 676
Query: 726 WLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSMSGSFHPPGPA*EAHLSFWSAR 547
I TSHPI SGA AQMLK E YS+S M P PTS++SGSFHPPGPA A+ F SAR
Sbjct: 675 LSIDVTSHPINSGAFIRAQMLKCETYSSSVM*PFPTSNISGSFHPPGPAKLAYSLF*SAR 496
Query: 546 DVML 535
D ML
Sbjct: 495 DTML 484
Score = 90.0 bits (190), Expect(2) = 2e-054
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = -3 / -3
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++R+ LD RG+ S CN++ +++ +RL PAIIY+ I V QLR+T
Sbjct: 444 PSI*IYSQFEALVVHIIRKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIDVPQLRETT 265
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
Q ISC L+D AA V+PAI
Sbjct: 264 *YQSISCFSYNILIDVAAVVIPAI 193
>gb|BX255691.1|BX255691 BX255691 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP008F07 similar to ALPHA GALACTOSIDASE
PRECURSOR, mRNA sequence
Length = 712
Score = 360 bits (781), Expect = 1e-098
Identities = 143/224 (63%), Positives = 165/224 (73%)
Frame = +2 / +1
Query: 311 KTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLCEWGRQNPATWAGGM 490
+TF+ WGIDYLKYDNC D G RY +M +A+ IF+SLCEWG NPATWA +
Sbjct: 1 RTFAEWGIDYLKYDNCFDDGSKPEVRYPRMRDALLKTDHPIFYSLCEWGVDNPATWARNV 180
Query: 491 GNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSI 670
GNSWRTT DI W S+TSRADQN+ WA YAGPGGWNDPDMLEVGNG M+ EYRSHFSI
Sbjct: 181 GNSWRTTLDIQSKWESITSRADQNNIWADYAGPGGWNDPDMLEVGNGNMTAEEYRSHFSI 360
Query: 671 WALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSN 850
WAL KAPLLIGCDVR +S + + IL N EVIAVNQD LGVQG+KV+ + LEVWAGPLSN
Sbjct: 361 WALMKAPLLIGCDVRFLSDKMLKILGNKEVIAVNQDPLGVQGRKVRQNGDLEVWAGPLSN 540
Query: 851 NRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFS 982
NR +VLWNR +A I A W IGL SS + R+LW H + +
Sbjct: 541 NRIVIVLWNRSSSRAMIKAHWKDIGLHSSISAKVRNLWKHRTLA 672
Score = 226 bits (489), Expect = 2e-058
Identities = 113/219 (51%), Positives = 134/219 (61%)
Frame = -1 / -3
Query: 969 CAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPC 790
C H+ + +EE SPM CA+++A F +T L SGPAQTS+ TF PC
Sbjct: 659 CFHKFLTLAEIEE*SPMSFQCALIIALDELLFHKTITIRLFESGPAQTSRSPFCLTFLPC 480
Query: 789 TPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSM 610
TP S TAMTS L + + L TS PI GA AQMLK ERYS++ M P PTS+M
Sbjct: 479 TPSGS*LTAMTSLLPRIFNILSLKNLTSQPISRGAFIRAQMLKCERYSSAVMLPFPTSNM 300
Query: 609 SGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKM 430
SGSFHPPGPA* A + FWSARDV+L L +SSVVLQLFP AQVAG PHSH E +
Sbjct: 299 SGSFHPPGPA*SAQMLFWSARDVILSHLLCMSSVVLQLFPTLRAQVAGLSTPHSHKE*NI 120
Query: 429 PFPYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENV 313
+ + A LI YL+ P+S QLSY R*SIP NV
Sbjct: 119 GWSVLRSASLILGYLTSGFEPSSKQLSYLR*SIPHSANV 3
Score = 102 bits (218), Expect(2) = 1e-022
Identities = 62/195 (31%), Positives = 95/195 (48%)
Frame = -3 / -2
Query: 970 VRP*ITSSDSSGRREPDARPLRGDGCLVSLPVPENHGLPVVAERPSPNLQAIAGLHFLSL 791
V P*+ + R + + P+ D C +P N+ VV + SPNL+ HF L
Sbjct: 660 VLP*VPDFGRNRRVKSNVFPMCFDHCS**TSIP*NYNNTVV*KWTSPNLKITILPHFSPL 481
Query: 790 HA*AILVHGDDFRVAEYXXXXXXXXXHVAPDQKRSLGERPDAEVRAVLRLGHAAVAHLKH 611
++* +L+ +D +A+ H+ DQ R L + P+AE+ AVL H A+ +L H
Sbjct: 480 YS*WVLIDCNDLFIAKDLQHFITQKSHITTDQ*RCLHKSPNAEM*AVLLCSHVAIPNL*H 301
Query: 610 VRIVPPARSGVGSPPVVLVCTRRHAAPVVGDIIGRSPAVPHAACPGSRVLPPPFAQREED 431
VRI+P RS + P VVLVC + P + SPA+ + A P S ++ P QR E
Sbjct: 300 VRIIPSTRSCIVGPNVVLVCPGCYTLPFTLYV*CCSPAISYIASPSSGIIDTPLTQRIEY 121
Query: 430 ALPIRLHSVAHLRIP 386
+ + H +P
Sbjct: 120 RMVCLKKCIPHPWVP 76
Score = 24.9 bits (48), Expect(2) = 1e-022
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 364 VVAVVVFQIIDTPGREC 314
+ V++ +I+DTP EC
Sbjct: 54 IETVIILEIVDTPFSEC 4
>gb|DR687768.1|DR687768 EST1077850 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABW35 3' end, mRNA sequence
Length = 821
Score = 201 bits (433), Expect(2) = 2e-098
Identities = 77/110 (70%), Positives = 89/110 (80%)
Frame = +2 / +2
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNHFGC I+EK++++TADAL+++G KLGYEYVNIDDCWAE RD G VA TFP
Sbjct: 182 NSWNHFGCDIDEKIVRETADALISSGFNKLGYEYVNIDDCWAEQKRDKNGRLVAKASTFP 361
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQKMPGSLDHEEQDVKTFSSWG 331
SGIKALADYVH KGLKLGIYSDAG RTCS + PGSL +E+ D TF+ WG
Sbjct: 362 SGIKALADYVHNKGLKLGIYSDAGFRTCSGQQPGSLGYEQIDADTFAEWG 511
Score = 179 bits (386), Expect(2) = 2e-098
Identities = 66/104 (63%), Positives = 79/104 (75%)
Frame = +2 / +3
Query: 329 GIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLCEWGRQNPATWAGGMGNSWRT 508
G+DYLKYDNCN G RY +M +A+ G+ IF+SLCEWGR +PATW +GNSWRT
Sbjct: 510 GVDYLKYDNCNTDGSKPEVRYPRMRDALLRTGRPIFYSLCEWGRDHPATWGAKVGNSWRT 689
Query: 509 TDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMS 640
T DI ++W S+ SR D N+RWA YAGPGGWNDPDMLEVGNG +S
Sbjct: 690 TQDINNSWISIASRVDLNERWAHYAGPGGWNDPDMLEVGNGELS 821
Score = 130 bits (278), Expect(2) = 1e-048
Identities = 63/101 (62%), Positives = 71/101 (70%)
Frame = -1 / -2
Query: 630 PLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPH 451
P PTS+MSGSFHPPGPA* AHLSF S R+ ML QL +S VVLQLFP QVAG LPH
Sbjct: 811 PFPTSNMSGSFHPPGPA*CAHLSFRSTREAMLIQLLLMSCVVLQLFPTLAPQVAG*SLPH 632
Query: 450 SHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR*SIP 328
SH+E + P + A LI Y + LLP+ LQLSYFR*S P
Sbjct: 631 SHNE*NIGRPVLRSASLILGYRTSGLLPSVLQLSYFR*STP 509
Score = 84.5 bits (178), Expect(2) = 1e-048
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = -1 / -3
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFS 34
CT*SA AL+P+G V FAT LP+ S SAQQSS+ TYS PS +P +ASAV L FS
Sbjct: 393 CT*SARALIPDGNVEAFATNLPFLSRFCSAQQSSIFTYSYPSLLKPDEINASAVSLTIFS 214
Query: 33 LIPQPKWFQLF 1
I QPK FQLF
Sbjct: 213 SISQPK*FQLF 181
Score = 73.9 bits (155), Expect(2) = 6e-026
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = -3 / -2
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
P I + Q E VH++ + LD R E S CN +S+ + + LRP IIY+ IL+++ +T
Sbjct: 433 PGI*IYPQFESFVVHIISKGLDPRWEC*SFCN*SSIFITLLLRPTIIYIYILISKFVETR 254
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
DQRIS + F ++ AA+V+P I
Sbjct: 253 *DQRISSFSNYFFINIAAKVIPTI 182
Score = 64.8 bits (135), Expect(2) = 6e-026
Identities = 31/102 (30%), Positives = 55/102 (53%)
Frame = -3 / -1
Query: 631 AVAHLKHVRIVPPARSGVGSPPVVLVCTRRHAAPVVGDIIGRSPAVPHAACPGSRVLPPP 452
A+++L HVRI+P S + P + + +R +A P V +++ PA+ + PGSR++ P
Sbjct: 812 AISYL*HVRIIPSTWSCIMCPSFIQIYSRSYADPTVVNVLCCPPAISNFGSPGSRMISSP 633
Query: 451 FAQREEDALPIRLHSVAHLRIPLHDAPAGVVAVVVFQIIDTP 326
F Q + P + H +P A +A+++F II+ P
Sbjct: 632 FTQ*IKYWTPCSQKCIPHSWVPHFWFAAISIAIIIF*IINPP 507
>gb|DR069923.1|DR069923 RTDK1_10_E11.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_10_E11_A029 3', mRNA sequence
Length = 862
Score = 214 bits (462), Expect(2) = 9e-094
Identities = 80/132 (60%), Positives = 98/132 (74%)
Frame = +2 / -2
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
Q PGS+ +E++D F+SWG+DYLKYDNC + RY M A+ + IF+SLC
Sbjct: 396 QVRPGSIYNEKRDANLFASWGVDYLKYDNCYNLDIPPKTRYPPMRKALNATERTIFYSLC 217
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGN 628
EWG +PA WA +GNSWRTT DI+D+W SMT+ AD ND+WA+YAGPGGWNDPDMLEVGN
Sbjct: 216 EWGVDDPALWADNVGNSWRTTGDISDSWESMTAIADLNDKWAAYAGPGGWNDPDMLEVGN 37
Query: 629 GGMSEAEYRSHF 664
GGM+ EYRSHF
Sbjct: 36 GGMTYQEYRSHF 1
Score = 150 bits (323), Expect(2) = 9e-094
Identities = 60/88 (68%), Positives = 70/88 (79%)
Frame = +2 / -2
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWN F C INE +I++TADAL++TGLA LGY YVNIDDCW+ R+ +G + +TFP
Sbjct: 660 NSWNFFACAINETVIRETADALISTGLADLGYVYVNIDDCWSSIVRNLEGDLEPDPKTFP 481
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTC 265
SGIKALADYVHAK LKLGIYSDAG TC
Sbjct: 480 SGIKALADYVHAKYLKLGIYSDAGIFTC 397
Score = 97.7 bits (207), Expect(3) = 1e-041
Identities = 51/92 (55%), Positives = 56/92 (60%)
Frame = -1 / +2
Query: 663 K*ERYSASDMPPLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMP 484
K +RYS MPP PTS+MSGSFHPPGPA AHLSF SA V+L S +S VV QLFP
Sbjct: 2 KCDRYSWYVMPPFPTSNMSGSFHPPGPAYAAHLSFRSAIAVILSHESLMSPVVRQLFPTL 181
Query: 483 PAQVAGFCLPHSHSEKKMPFPYVFIALLIFVY 388
A AG PHS SE + F AL I Y
Sbjct: 182 SAHKAGSSTPHSQSE*NIVRSVAFNALRIGGY 277
Score = 68.9 bits (144), Expect(3) = 1e-041
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = -1 / +2
Query: 210 T*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFSL 31
T*SASAL+PEG V +K P + QQSS+LTY+*P A PV SASAV ++ SL
Sbjct: 452 T*SASALIPEGNVFGSGSKSPSKLRTIEDQQSSILTYT*PRSANPVDISASAVSRITVSL 631
Query: 30 IPQPKWFQLF 1
I Q K FQLF
Sbjct: 632 IAQAKKFQLF 661
Score = 55.1 bits (114), Expect(3) = 4e-023
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = -3 / +1
Query: 637 HAAVAHLKHVRIVPPARSGVGSPPVVLVCTRRHAAPVVGDIIGRSPAVPHAACPGSRVLP 458
HA +++L+HVRI+P R+ + P ++ + H P + + R+P + + CP V+
Sbjct: 28 HATISNLQHVRIIPSTRTSICCPLIIQISNSCHTFP*ITYVTSRAPTISNIICPQGWVIH 207
Query: 457 PPFAQ 443
PF +
Sbjct: 208 TPFTK 222
Score = 53.3 bits (110), Expect(3) = 4e-023
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = -3 / +1
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
P I +D + E +++V E D + L V + +L + RPAII ++I +A++RQ
Sbjct: 409 PCIRIDTKFEVFCMNIVSECFDP*RKCLWVWLQVAL*IAHY*RPAIININIYIAKIRQPS 588
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
+ ISC D LVD +E +P +
Sbjct: 589 RYKCISCFPDHSLVDSTSEKIPTV 660
Score = 43.2 bits (88), Expect(3) = 1e-041
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = -3 / +1
Query: 364 VVAVVVFQIIDTPGRECLHVLLLVVK*PWHFLAAR 260
V+A+V+FQ+++TPGR+ + + LL+V W LA++
Sbjct: 301 VIAIVIFQVVNTPGRKQICISLLIVNGTWSNLASK 405
Score = 38.2 bits (77), Expect(3) = 4e-023
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1 / +2
Query: 357 QLSYFR*SIPQDENVFTSCSSWSSDPGIFW 268
QLSYF+*S PQD N F S S +PG W
Sbjct: 308 QLSYFK*STPQDANRFASLFSL*MEPGRTW 397
>gb|CO168655.1|CO168655 NDL1_1_D02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_1_D02_A029 5', mRNA sequence
Length = 765
Score = 334 bits (724), Expect(2) = 9e-094
Identities = 129/183 (70%), Positives = 148/183 (80%)
Frame = +2 / +1
Query: 422 GKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWN 601
G+ IF+S+CEWG+QNPATWA + NSWRTT DI D W S+TS ADQN++WA+YAGPGGWN
Sbjct: 1 GRPIFYSMCEWGQQNPATWAPNIANSWRTTGDIQDKWDSITSLADQNNQWAAYAGPGGWN 180
Query: 602 DPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDS 781
DPDMLEVGNG M+ EYRSHFSIWAL KAPLLIGCD+R+ S +T+ IL N EVI VNQD
Sbjct: 181 DPDMLEVGNGNMNTEEYRSHFSIWALMKAPLLIGCDIRSASSETIQILGNKEVINVNQDR 360
Query: 782 LGVQGKKVQSSNGLEVWAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDL 961
LGVQGKKV LEVWAG LSN R A+VLWNR G QA+ITA+W+ IGLP + V ARDL
Sbjct: 361 LGVQGKKVSKQGDLEVWAGQLSNGRVAIVLWNRSGSQASITAKWTDIGLPYNAVVQARDL 540
Query: 962 WAH 970
WAH
Sbjct: 541 WAH 549
Score = 190 bits (410), Expect = 2e-047
Identities = 100/176 (56%), Positives = 110/176 (62%)
Frame = -1 / -2
Query: 966 AHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPCT 787
AH+S A T G PM H AV+ A P F RT A L L S PAQTS+ TFFP T
Sbjct: 545 AHKSLA*TTAL*GRPMSVHLAVIDACEPLLFHRTMATLPLDSCPAQTSRSPCLLTFFP*T 366
Query: 786 PRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSMS 607
P SW T MTS L + IV SHPI GA AQMLK +RYS+ + P PTS+MS
Sbjct: 365 PNRSWLTLMTSLLPKICIVSDDADLISHPISRGAFIKAQMLKCDRYSSVFILPFPTSNMS 186
Query: 606 GSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSE 439
GSFHPPGPA AH F SARDVML LS +S VVLQLF + AQVAGFC PHSH E
Sbjct: 185 GSFHPPGPAYAAHWLF*SARDVMLSHLS*MSPVVLQLFAILGAQVAGFC*PHSHIE 18
Score = 30.9 bits (61), Expect(2) = 9e-094
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 986 QGQLSASVPPHDCKMYVL 1039
+G L++ VP H CKMY+L
Sbjct: 571 KGSLTSYVPSHGCKMYIL 624
>gb|BM133882.1|BM133882 NXLV_013_F01_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_013_F01 5' similar to Arabidopsis thaliana
sequence At5g08380 alpha-galactosidase - like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 676
Score = 336 bits (729), Expect = 2e-091
Identities = 133/206 (64%), Positives = 157/206 (76%)
Frame = +2 / +2
Query: 329 GIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLCEWGRQNPATWAGGMGNSWRT 508
G+DYLKYDNCN G RY +M +A+ G+ IF+SLCEWGR +PATW +GNSWRT
Sbjct: 20 GVDYLKYDNCNTDGSKPEVRYPRMGDALLRTGRPIFYSLCEWGRDHPATWGAKVGNSWRT 199
Query: 509 TDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKA 688
T DI ++W S+ SR D N+RWA YAGPGGWNDPDMLEVGNG +S EYRSHF +WAL KA
Sbjct: 200 TQDINNSWISIASRVDLNERWAHYAGPGGWNDPDMLEVGNGELSREEYRSHFGLWALMKA 379
Query: 689 PLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRKAVV 868
PLLIGCDVR+MS T+ IL N+EVIAVNQD LGVQGKKV S++ LEVWAGPLSNNR V+
Sbjct: 380 PLLIGCDVRSMSSGTVEILGNAEVIAVNQDPLGVQGKKVYSNDNLEVWAGPLSNNRXVVI 559
Query: 869 LWNRQGYQATITAQWSSIGLPSSTAV 946
L N ++A+IT +W IG SS V
Sbjct: 560 LLNXXEWRASITXKWEDIGXXSSHXV 637
Score = 204 bits (439), Expect = 2e-051
Identities = 107/206 (51%), Positives = 125/206 (60%)
Frame = -1 / -2
Query: 945 TAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPCTPRLSWFT 766
T E+ P+ H V+ A + F R T LL GPA TS+ L TF PCTP S T
Sbjct: 636 TXCEDXXPISSHLXVIEALHSXXFNRITTXRLLDKGPAHTSRLSLL*TFLPCTPNGS*LT 457
Query: 765 AMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSMSGSFHPPG 586
A+TS L + V LI TSHPI +GA AQ K +RYS+ P PTS+MSGSFHPPG
Sbjct: 456 AITSALPRISTVPELIDLTSHPINNGAFIRAQRPKCDRYSSLLNSPFPTSNMSGSFHPPG 277
Query: 585 PA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIA 406
PA* AHLSF S R+ ML QL +S VVLQLFP QVAG LPHSH+E + P + A
Sbjct: 276 PA*CAHLSFRSTREAMLIQLLLMSCVVLQLFPTLAPQVAG*SLPHSHNE*NIGRPVLRSA 97
Query: 405 LLIFVYLSMTLLPASLQLSYFR*SIP 328
I Y + LLP+ LQLSYFR*S P
Sbjct: 96 SPILGYRTSGLLPSVLQLSYFR*STP 19
>gb|DR682936.1|DR682936 EST1073011 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAD25 3' end, mRNA sequence
Length = 783
Score = 192 bits (413), Expect(2) = 3e-091
Identities = 78/102 (76%), Positives = 87/102 (85%)
Frame = +2 / +3
Query: 536 SMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVR 715
S+ SRADQN+ +AS+AGPGGWNDPDMLEVGNG M++ EY SHFSIWAL KAPLLIGCDV
Sbjct: 477 SIVSRADQNNEYASFAGPGGWNDPDMLEVGNGHMTDEEYVSHFSIWALMKAPLLIGCDVT 656
Query: 716 AMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGP 841
+M ++T GILSNSEVIAVNQD LGVQGKKV LEVWAGP
Sbjct: 657 SMDKKTYGILSNSEVIAVNQDPLGVQGKKVSKQVDLEVWAGP 782
Score = 168 bits (361), Expect(2) = 3e-091
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = +2 / +2
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNH+GC INE +I++TADALV++GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 185 NSWNHYGCNINENIIRETADALVSSGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFP 364
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 365 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 457
Score = 133 bits (284), Expect(2) = 4e-050
Identities = 64/102 (62%), Positives = 71/102 (69%)
Frame = -1 / -3
Query: 840 GPAQTSKPLLDCTFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK 661
GPA TS+ TFFPCTPR S TA+TSELL +P V I TSHPI SGA AQMLK
Sbjct: 781 GPAHTSRSTCLLTFFPCTPRGS*LTAITSELLRIP*VFLSIDVTSHPINSGAFIRAQMLK 602
Query: 660 *ERYSASDMPPLPTSSMSGSFHPPGPA*EAHLSFWSARDVML 535
E YS+S M P PTS++SGSFHPPGPA A+ F SARD ML
Sbjct: 601 CETYSSSVM*PFPTSNISGSFHPPGPAKLAYSLF*SARDTML 476
Score = 90.0 bits (190), Expect(2) = 4e-050
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = -3 / -3
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++R+ LD RG+ S CN++ +++ +RL PAIIY+ I V QLR+T
Sbjct: 436 PSI*IYSQFEALVVHIIRKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIDVPQLRETT 257
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
Q ISC L+D AA V+PAI
Sbjct: 256 *YQSISCFSYNILIDVAAVVIPAI 185
>gb|CO173605.1|CO173605 NDL1_37_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_37_B04_A029 5', mRNA sequence
Length = 724
Score = 177 bits (382), Expect(2) = 3e-088
Identities = 68/112 (60%), Positives = 81/112 (72%)
Frame = +2 / +1
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLC
Sbjct: 388 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLC 567
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWND 604
EWG PATWA +G+SWRTT+DI D W S+ SRADQN+ +AS+AGPGGWND
Sbjct: 568 EWGVDVPATWARQIGSSWRTTEDIEDKWESIVSRADQNNEYASFAGPGGWND 723
Score = 169 bits (363), Expect(2) = 3e-088
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = +2 / +1
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNH+GC INE +I++TADALV++GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 124 NSWNHYGCNINENIIRETADALVSSGLSKLGYTYVNIDDCWAEPNRDQNGRLVASASKFP 303
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 304 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 396
Score = 110 bits (234), Expect(2) = 2e-043
Identities = 58/111 (52%), Positives = 66/111 (59%)
Frame = -1 / -3
Query: 603 SFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPF 424
SFHPPGPA A+ F SARD ML LS++SSVVLQL P+ A VAG PHSH EK +
Sbjct: 722 SFHPPGPAKLAYSLF*SARDTMLSHLSSMSSVVLQLLPICRAHVAGTSTPHSHREKNIGH 543
Query: 423 PYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIF 271
+ A IF Y L P+ QLSY R*S PQ NV S S +PG F
Sbjct: 542 RVLKSASCIFGYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCSCPKEPGCF 390
Score = 87.2 bits (184), Expect(2) = 2e-043
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = -3 / -2
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++ + LD RG+ S CN++ +++ +RL PAIIY+ I V QLR+T
Sbjct: 375 PSI*IYSQFEALVVHIISKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIGVPQLRETT 196
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
Q ISC L+D AA V+PAI
Sbjct: 195 *YQSISCFSYNILIDVAAVVIPAI 124
Score = 74.4 bits (156), Expect(2) = 9e-024
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = -1 / -3
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFS 34
CT*SA AL+PEG AT LP+*S SAQQSS+ T P+ RP+ T ASAV + FS
Sbjct: 335 CT*SARALIPEGNFEALATNLPF*SRLGSAQQSSIFT*VYPNLERPLDTKASAVSRIIFS 156
Query: 33 LIPQPKWFQLF 1
L+ QP FQLF
Sbjct: 155 LMLQP**FQLF 123
Score = 57.0 bits (118), Expect(2) = 9e-024
Identities = 30/99 (30%), Positives = 49/99 (49%)
Frame = -3 / -2
Query: 565 VVLVCTRRHAAPVVGDIIGRSPAVPHAACPGSRVLPPPFAQREEDALPIRLHSVAHLRIP 386
+VL+CT A P+V ++ PA + P R + PF Q +E P + HL +P
Sbjct: 684 IVLICTGYDAFPLVLNVFCCPPAASNLPSPRGRNIHSPFTQGKEYWPPGSQKCIMHLWVP 505
Query: 385 LHDAPAGVVAVVVFQIIDTPGRECLHVLLLVVK*PWHFL 269
A +V V++F+II P + + + LL+ + W L
Sbjct: 504 AFRLRAIIVTVIIFEIIHAPISKRIGIYLLMSQGTWLLL 388
>gb|DR683144.1|DR683144 EST1073220 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAE67 3' end, mRNA sequence
Length = 786
Score = 177 bits (380), Expect(2) = 1e-087
Identities = 66/112 (58%), Positives = 81/112 (72%)
Frame = +2 / +3
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ + IF+SLC
Sbjct: 450 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRRPIFYSLC 629
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWND 604
EWG PATWA +G+SWRTT DI D W S+ SRAD+N+ +AS+AGPGGWND
Sbjct: 630 EWGLDVPATWARQIGSSWRTTQDIEDKWESIVSRADENNEYASFAGPGGWND 785
Score = 167 bits (360), Expect(2) = 1e-087
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = +2 / +3
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNH+GC INE +I++TADALV+ GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 186 NSWNHYGCNINENIIRETADALVSNGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFP 365
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 366 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 458
Score = 102 bits (217), Expect(2) = 1e-040
Identities = 56/111 (50%), Positives = 64/111 (57%)
Frame = -1 / -3
Query: 603 SFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPF 424
SFHPPGPA A+ F SARD ML LS++S VVLQL P+ A VAG PHSH E +
Sbjct: 784 SFHPPGPAKLAYSLFSSARDTMLSHLSSMSCVVLQLLPICRAHVAGTSNPHSHRE*NIGR 605
Query: 423 PYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIF 271
+ A IF Y L P+ QLSY R*S PQ NV S S +PG F
Sbjct: 604 RVLKSASCIFGYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCSCPKEPGCF 452
Score = 85.8 bits (181), Expect(2) = 1e-040
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = -3 / -2
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++ + LD RG+ S CN++ +++ +RL PAIIY+ I + QLR+T
Sbjct: 437 PSI*IYSQFEALVVHIISKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIDIPQLRETI 258
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
Q ISC L+D AA V+PAI
Sbjct: 257 *YQSISCFSYNILIDVAAVVIPAI 186
Score = 73.5 bits (154), Expect(2) = 5e-022
Identities = 40/71 (56%), Positives = 46/71 (64%)
Frame = -1 / -3
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFS 34
CT*SA AL+PEG AT LP+*S SAQQSS+ T P+ RP T ASAV + FS
Sbjct: 397 CT*SARALIPEGNFEALATNLPF*SRLGSAQQSSIFT*IYPNLERPFDTKASAVSRIIFS 218
Query: 33 LIPQPKWFQLF 1
L+ QP FQLF
Sbjct: 217 LMLQP**FQLF 185
Score = 51.9 bits (107), Expect(2) = 5e-022
Identities = 32/112 (28%), Positives = 51/112 (45%)
Frame = -3 / -2
Query: 604 IVPPARSGVGSPPVVLVCTRRHAAPVVGDIIGRSPAVPHAACPGSRVLPPPFAQREEDAL 425
I+P + +V + T A P+V +++ P + P R + PF Q +
Sbjct: 785 IIPSTWTSKACIFIVFIRTGYDAFPLVLNVLCCPPTASNLPSPCGRNIQSPFTQGIKYWP 606
Query: 424 PIRLHSVAHLRIPLHDAPAGVVAVVVFQIIDTPGRECLHVLLLVVK*PWHFL 269
P + HL +P A +V VV+F+II TP + + V LLV + W L
Sbjct: 605 PSSQKCIMHLWVPAFRLRAIIVTVVIFEIIHTPVSKRISVYLLVSQGTWLLL 450
>gb|DR055288.1|DR055288 RTCA1_22_F01.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_22_F01_A029 5', mRNA sequence
Length = 598
Score = 293 bits (634), Expect(2) = 1e-086
Identities = 114/176 (64%), Positives = 136/176 (77%)
Frame = +2 / +2
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
Q PGS+ +E++D F+SWG+DYLKYDNC + RY M A+ + IF+SLC
Sbjct: 71 QVRPGSIYNEKRDANLFASWGVDYLKYDNCYNLDIPPKTRYPPMRKALNATERTIFYSLC 250
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGN 628
EWG +PA WA +GNSWRTT DI+D+W SMT+ AD ND+WA+YAGPGGWNDPDMLEVGN
Sbjct: 251 EWGVDDPALWADNVGNSWRTTGDISDSWESMTAIADLNDKWAAYAGPGGWNDPDMLEVGN 430
Query: 629 GGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQG 796
GGM+ EYRSHFSIWAL KAPLLIGCDVR M++ T+ ILSN EVI VNQD+LGVQG
Sbjct: 431 GGMTYQEYRSHFSIWALMKAPLLIGCDVRNMTKDTLEILSNKEVIGVNQDTLGVQG 598
Score = 143 bits (306), Expect(2) = 4e-040
Identities = 74/136 (54%), Positives = 84/136 (61%)
Frame = -1 / -2
Query: 795 PCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTS 616
PCTPR+S T MTS LL + V +I TS PI +GA AQ+LK +RYS MPP PTS
Sbjct: 597 PCTPRVS*LTPMTSLLLKISKVSLVIFLTSQPINNGAFIRAQILKCDRYSWYVMPPFPTS 418
Query: 615 SMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEK 436
+MSGSFHPPGPA AHLSF SA V+L S +S VV QLFP A AG PHS SE
Sbjct: 417 NMSGSFHPPGPAYAAHLSFRSAIAVILSHESLMSPVVRQLFPTLSAHKAGSSTPHSQSE* 238
Query: 435 KMPFPYVFIALLIFVY 388
+ F AL I Y
Sbjct: 237 NIVRSVAFNALRIGGY 190
Score = 48.3 bits (99), Expect(2) = 1e-086
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +2 / +2
Query: 197 LADYVHAKGLKLGIYSDAGTRTC 265
LADYVHAK LKLGIYSDAG TC
Sbjct: 2 LADYVHAKYLKLGIYSDAGIFTC 70
Score = 43.2 bits (88), Expect(2) = 4e-040
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = -3 / -1
Query: 364 VVAVVVFQIIDTPGRECLHVLLLVVK*PWHFLAAR 260
V+A+V+FQ+++TPGR+ + + LL+V W LA++
Sbjct: 166 VIAIVIFQVVNTPGRKQICISLLIVNGTWSNLASK 62
>gb|CO363233.1|CO363233 RTK1_8_B02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_8_B02_A029 5', mRNA sequence
Length = 714
Score = 248 bits (537), Expect(3) = 4e-086
Identities = 96/138 (69%), Positives = 114/138 (82%)
Frame = +2 / +3
Query: 398 MSNAMKTYGKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWAS 577
M A+ + IF+SLCEWG +PA WA +GNSWRTT DI+D+W SMT+ AD ND+WA+
Sbjct: 9 MRKALNATERTIFYSLCEWGVDDPALWADNVGNSWRTTGDISDSWESMTAIADLNDKWAA 188
Query: 578 YAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSE 757
YAGPGGWNDPDMLEVGNGGM+ EYRSHFSIWAL KAPLLIGCDVR M+++T+ ILSN E
Sbjct: 189 YAGPGGWNDPDMLEVGNGGMTYQEYRSHFSIWALMKAPLLIGCDVRNMTKETLEILSNKE 368
Query: 758 VIAVNQDSLGVQGKKVQS 811
VI VNQD+LGVQG+KV +
Sbjct: 369 VIGVNQDTLGVQGRKVSA 422
Score = 147 bits (316), Expect(2) = 2e-041
Identities = 75/136 (55%), Positives = 85/136 (62%)
Frame = -1 / -3
Query: 804 TFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPL 625
TF PCTPR+S T MTS LL + V +I TS PI +GA AQ+LK +RYS MPP
Sbjct: 415 TFLPCTPRVS*LTPMTSLLLKISKVSLVIFLTSQPINNGAFIRAQILKCDRYSWYVMPPF 236
Query: 624 PTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSH 445
PTS+MSGSFHPPGPA AHLSF SA V+L S +S VV QLFP A AG PHS
Sbjct: 235 PTSNMSGSFHPPGPAYAAHLSFRSAIAVILSHESLMSPVVRQLFPTLSAHKAGSSTPHSQ 56
Query: 444 SEKKMPFPYVFIALLI 397
SE + F AL I
Sbjct: 55 SE*NIVRSVAFNALRI 8
Score = 78.0 bits (164), Expect(3) = 4e-086
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = +2 / +3
Query: 824 EVWAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFS 982
+VWAGPLS R AVV WNR +ITA+W ++GL S+ AV+ RDLW H + S
Sbjct: 444 QVWAGPLSGGRLAVVFWNRCSEATSITAKWDAVGLESTVAVSVRDLWKHETLS 602
Score = 42.8 bits (87), Expect(2) = 2e-041
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -1 / -3
Query: 984 AENDECAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQT 826
+E C H+SR TA + P H AV+ FQ+TTA SGPAQT
Sbjct: 604 SERVSCFHKSRTETATVDSRPTASHLAVIEVASEHLFQKTTAKRPPESGPAQT 446
Score = 32.2 bits (64), Expect(3) = 4e-086
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 989 GQLSASVPPHDCKMYVLTPN 1048
G + +V H C+MYVLTPN
Sbjct: 615 GVMEVTVDTHGCEMYVLTPN 674
>gb|DT632758.1|DT632758 EST1147689 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFN44 3' end, mRNA sequence
Length = 758
Score = 317 bits (686), Expect = 1e-085
Identities = 121/189 (64%), Positives = 145/189 (76%)
Frame = +2 / +1
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNHFGC I+EK++++TADAL+++G KLGYEYVNIDDCWAE RD G VA TFP
Sbjct: 190 NSWNHFGCDIDEKIVRETADALISSGFNKLGYEYVNIDDCWAEQKRDKNGRLVAKASTFP 369
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQKMPGSLDHEEQDVKTFSSWGIDYLKYDNCN 361
SGIKALADYVH KGLKLGIYSDAG RTCS + PGSL +E+ D TF+ WG+DYLKYDNCN
Sbjct: 370 SGIKALADYVHNKGLKLGIYSDAGFRTCSGQQPGSLGYEQIDADTFAEWGVDYLKYDNCN 549
Query: 362 DAGRSVMERYTKMSNAMKTYGKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDIADNWGSM 541
G RY +M +A+ G+ IF+SLCEWGR +PATW +GNSWRTT DI ++W S+
Sbjct: 550 TDGSKPEVRYPRMRDALLGTGRPIFYSLCEWGRDHPATWGAKVGNSWRTTQDINNSWISI 729
Query: 542 TSRADQNDR 568
SR D N+R
Sbjct: 730 ASRVDLNER 756
Score = 101 bits (216), Expect(2) = 4e-040
Identities = 52/98 (53%), Positives = 61/98 (62%)
Frame = -1 / -1
Query: 570 HLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFV 391
HLSF S R+ ML QL +S VVLQLFP QVAG LPHSH+E + P A LI
Sbjct: 758 HLSFRSTREAMLIQLLLMSCVVLQLFPTLAPQVAG*SLPHSHNE*NIGRPVPRSASLILG 579
Query: 390 YLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPG 277
Y + LLP+ LQLSYFR*S P NV S S+ ++PG
Sbjct: 578 YRTSGLLPSVLQLSYFR*STPHSANVSASICSYPNEPG 465
Score = 84.5 bits (178), Expect(2) = 4e-040
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = -1 / -1
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFS 34
CT*SA AL+P+G V FAT LP+ S SAQQSS+ TYS PS +P +ASAV L FS
Sbjct: 401 CT*SARALIPDGNVEAFATNLPFLSRFCSAQQSSIFTYSYPSLLKPDEINASAVSLTIFS 222
Query: 33 LIPQPKWFQLF 1
I QPK FQLF
Sbjct: 221 SISQPK*FQLF 189
Score = 75.8 bits (159), Expect(2) = 2e-025
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = -3 / -3
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
P I + Q E VH++ + LD R E S CN +S+ + + LRP IIY+ IL+++ +T
Sbjct: 441 PGI*IYPQFESFVVHIISKGLDPRWEC*SFCN*SSIFITLLLRPTIIYIYILISKFVETR 262
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
DQRIS + FL++ AA+V+P I
Sbjct: 261 *DQRISSFSNYFLINIAAKVIPTI 190
Score = 61.1 bits (127), Expect(2) = 2e-025
Identities = 28/95 (29%), Positives = 52/95 (54%)
Frame = -3 / -3
Query: 562 VLVCTRRHAAPVVGDIIGRSPAVPHAACPGSRVLPPPFAQREEDALPIRLHSVAHLRIPL 383
+ + +R +A P V +++ PA+ + PGSR++ PF Q + P + H +P
Sbjct: 750 IQIYSRSYADPTVVNVLCCPPAISNFGSPGSRMISSPFTQ*IKYWTPCSQKCIPHSWVPH 571
Query: 382 HDAPAGVVAVVVFQIIDTPGRECLHVLLLVVK*PW 278
A +A+++F II+ P R+C+ + LL+ +* W
Sbjct: 570 FWFTAISIAIIIF*IINPPFRKCICIYLLISQ*AW 466
>gb|CF474603.1|CF474603 RTWW2_9_B08.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_9_B08_A021 5', mRNA sequence
Length = 772
Score = 312 bits (676), Expect = 3e-084
Identities = 127/188 (67%), Positives = 142/188 (75%)
Frame = +2 / +2
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGN 628
EWG PATWA +G+SWRTT DI D W S+ SRAD+N+ +AS+AGPGGWNDPDMLEVGN
Sbjct: 2 EWGLDVPATWARQIGSSWRTTQDIEDKWESIVSRADENNEYASFAGPGGWNDPDMLEVGN 181
Query: 629 GGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQ 808
G M+ EY SHFSIWAL KAPLLIGCDV +M ++T GILSNSEVIAVNQD LGVQGKKV
Sbjct: 182 GHMTAEEYGSHFSIWALMKAPLLIGCDVTSMEKKTYGILSNSEVIAVNQDPLGVQGKKVS 361
Query: 809 SSNGLEVWAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFSAQ 988
LEVWAGPLSNNR AVVLWNR +ATITA+W IGL SS V R+LW H A
Sbjct: 362 KQGDLEVWAGPLSNNRVAVVLWNRSNSRATITAKWEDIGLDSSAVVRVRNLWRHRELEAN 541
Query: 989 GQLSASVP 1012
Q S + P
Sbjct: 542 HQGSLTAP 565
Score = 198 bits (426), Expect = 1e-049
Identities = 98/182 (53%), Positives = 116/182 (63%)
Frame = -1 / -2
Query: 993 WP*AENDECAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPL 814
W A N C H+ +T EE +P+ H AV+VA F RTTA LL GPA TS+
Sbjct: 546 W*FASNSLCLHKFLTLTTAEESNPISSHLAVIVALELLLFHRTTATRLLDRGPAHTSRSP 367
Query: 813 LDCTFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDM 634
TFFPCTP+ S TA+TSELL +P V + I TSHPI GA AQMLK E YS++ M
Sbjct: 366 CLLTFFPCTPKGS*LTAITSELLRIP*VFFSIDVTSHPINRGAFIRAQMLKCEPYSSAVM 187
Query: 633 PPLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLP 454
P PTS++SGSFHPPGPA A+ F SARD ML LS++S VVLQL P+ A VAG P
Sbjct: 186 WPFPTSNISGSFHPPGPAKLAYSLFSSARDTMLSHLSSMSCVVLQLLPICRAHVAGTSNP 7
Query: 453 HS 448
HS
Sbjct: 6 HS 1
>gb|DT628777.1|DT628777 EST1155347 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMD187 5' end, mRNA sequence
Length = 746
Score = 311 bits (673), Expect = 8e-084
Identities = 123/194 (63%), Positives = 149/194 (76%)
Frame = +2 / +3
Query: 395 KMSNAMKTYGKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWA 574
KM +A+ G+ IF+SLCEWG +PATWA +GNSWRTT DI + W + SRAD N++WA
Sbjct: 6 KMRDALLKAGRPIFYSLCEWGVDDPATWAPKIGNSWRTTQDINNTWTRIVSRADLNNKWA 185
Query: 575 SYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNS 754
YAGPGGWNDPDMLEVGNG +++ EY +HFS+WAL KAPLLIGCDVR+MS T+ ILSN
Sbjct: 186 KYAGPGGWNDPDMLEVGNGNVTKDEYGAHFSLWALMKAPLLIGCDVRSMSLGTVKILSNK 365
Query: 755 EVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPS 934
EVIAVNQD LG+QG+KV GLEVWAGPLS+NR V+L+NR+ ATITA+W IGL
Sbjct: 366 EVIAVNQDLLGIQGEKVYKHGGLEVWAGPLSDNRIVVILFNREKSSATITAKWEDIGLKP 545
Query: 935 STAVTARDLWAHSS 976
S V R+LW H +
Sbjct: 546 SEEVQVRNLWKHKN 587
Score = 172 bits (370), Expect = 5e-042
Identities = 94/192 (48%), Positives = 109/192 (56%)
Frame = -1 / -2
Query: 969 CAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPC 790
C HR T+ E P+ H AV+VA + T L GPA TS+P TF PC
Sbjct: 580 CFHRFLTWTSSEGLRPISSHFAVIVALDFSLLNKITTIRLSDKGPAHTSRPPCL*TFSPC 401
Query: 789 TPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSM 610
P SW TA+TS LL + V LI TSHPI +GA A LK YS+ P PTS+M
Sbjct: 400 IPNRSWLTAITSLLLRIFTVPRLIDLTSHPINNGAFIKAHKLKCAPYSSLVTLPFPTSNM 221
Query: 609 SGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKM 430
SGSFHPPGPA AHL F SA +L Q+ IS VVLQLFP+ AQVAG PHSH+E +
Sbjct: 220 SGSFHPPGPAYFAHLLFRSALLTILVQVLLISCVVLQLFPILGAQVAGSSTPHSHNE*NI 41
Query: 429 PFPYVFIALLIF 394
P A LIF
Sbjct: 40 GRPAFRSASLIF 5
>gb|DT628835.1|DT628835 EST1155405 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMD251 5' end, mRNA sequence
Length = 746
Score = 311 bits (673), Expect = 8e-084
Identities = 123/194 (63%), Positives = 149/194 (76%)
Frame = +2 / +3
Query: 395 KMSNAMKTYGKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWA 574
KM +A+ G+ IF+SLCEWG +PATWA +GNSWRTT DI + W + SRAD N++WA
Sbjct: 6 KMRDALLKAGRPIFYSLCEWGVDDPATWAPKIGNSWRTTQDINNTWTRIVSRADLNNKWA 185
Query: 575 SYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNS 754
YAGPGGWNDPDMLEVGNG +++ EY +HFS+WAL KAPLLIGCDVR+MS T+ ILSN
Sbjct: 186 KYAGPGGWNDPDMLEVGNGNVTKDEYGAHFSLWALMKAPLLIGCDVRSMSLGTVKILSNK 365
Query: 755 EVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPS 934
EVIAVNQD LG+QG+KV GLEVWAGPLS+NR V+L+NR+ ATITA+W IGL
Sbjct: 366 EVIAVNQDLLGIQGEKVYKHGGLEVWAGPLSDNRIVVILFNREKSSATITAKWEDIGLKP 545
Query: 935 STAVTARDLWAHSS 976
S V R+LW H +
Sbjct: 546 SEEVQVRNLWKHKN 587
Score = 172 bits (370), Expect = 5e-042
Identities = 94/192 (48%), Positives = 109/192 (56%)
Frame = -1 / -2
Query: 969 CAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPC 790
C HR T+ E P+ H AV+VA + T L GPA TS+P TF PC
Sbjct: 580 CFHRFLTWTSSEGLRPISSHFAVIVALDFSLLNKITTIRLSDKGPAHTSRPPCL*TFSPC 401
Query: 789 TPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSM 610
P SW TA+TS LL + V LI TSHPI +GA A LK YS+ P PTS+M
Sbjct: 400 IPNRSWLTAITSLLLRIFTVPRLIDLTSHPINNGAFIKAHKLKCAPYSSLVTLPFPTSNM 221
Query: 609 SGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKM 430
SGSFHPPGPA AHL F SA +L Q+ IS VVLQLFP+ AQVAG PHSH+E +
Sbjct: 220 SGSFHPPGPAYFAHLLFRSALLTILVQVLLISCVVLQLFPILGAQVAGSSTPHSHNE*NI 41
Query: 429 PFPYVFIALLIF 394
P A LIF
Sbjct: 40 GRPAFRSASLIF 5
>gb|DR079644.1|DR079644 RTFEPL1_12_D02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_12_D02_A029 5', mRNA sequence
Length = 869
Score = 180 bits (387), Expect(2) = 3e-083
Identities = 66/115 (57%), Positives = 83/115 (72%)
Frame = +2 / +1
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
Q PGS+ +E++D F+SWG+DYLKYDNC + RY M A+ + IF+SLC
Sbjct: 523 QVRPGSIYNEKRDANLFASWGVDYLKYDNCYNLDIPPKTRYPPMRKALNATERTIFYSLC 702
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDM 613
EWG +PA WA +GNSWRTT DI+D+W SMT+ AD ND+WA+YAGPGGWNDPDM
Sbjct: 703 EWGVDDPALWADNVGNSWRTTGDISDSWESMTAIADLNDKWAAYAGPGGWNDPDM 867
Score = 150 bits (322), Expect(2) = 3e-083
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +2 / +1
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWN F C INE ++++TADAL++TGLA LGY YVNIDDCW+ R+ +G + +TFP
Sbjct: 259 NSWNFFACAINETVVRETADALISTGLADLGYVYVNIDDCWSSIVRNLEGDLEPDPKTFP 438
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTC 265
SGIKALADYVHAK LKLGIYSDAG TC
Sbjct: 439 SGIKALADYVHAKYLKLGIYSDAGIFTC 522
Score = 76.7 bits (161), Expect(3) = 3e-035
Identities = 41/76 (53%), Positives = 45/76 (59%)
Frame = -1 / -1
Query: 615 SMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEK 436
+MSGSFHPPGPA AHLSF SA V+L S +S VV QLFP A AG PHS SE
Sbjct: 869 NMSGSFHPPGPAYAAHLSFRSAIAVILSHESLMSPVVRQLFPTLSAHKAGSSTPHSQSE* 690
Query: 435 KMPFPYVFIALLIFVY 388
+ F AL I Y
Sbjct: 689 NIVRSVAFNALRIGGY 642
Score = 68.0 bits (142), Expect(3) = 3e-035
Identities = 39/70 (55%), Positives = 45/70 (64%)
Frame = -1 / -1
Query: 210 T*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFSL 31
T*SASAL+PEG V +K P + QQSS+LTY+*P A PV SASAV + SL
Sbjct: 467 T*SASALIPEGNVFGSGSKSPSKLRTIEDQQSSILTYT*PRSANPVDISASAVSRTTVSL 288
Query: 30 IPQPKWFQLF 1
I Q K FQLF
Sbjct: 287 IAQAKKFQLF 258
Score = 43.2 bits (88), Expect(3) = 3e-035
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = -3 / -3
Query: 364 VVAVVVFQIIDTPGRECLHVLLLVVK*PWHFLAAR 260
V+A+V+FQ+++TPGR+ + + LL+V W LA++
Sbjct: 618 VIAIVIFQVVNTPGRKQICISLLIVNGTWSNLASK 514
>gb|AL751195.1|AL751195 AL751195 RS Pinus pinaster cDNA clone RS06B05 similar to ALPHA
GALACTOSIDASE, mRNA sequence
Length = 672
Score = 292 bits (632), Expect(2) = 6e-083
Identities = 119/173 (68%), Positives = 134/173 (77%)
Frame = +2 / +3
Query: 467 PATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEA 646
PATWA +G+SWRTT DI D W S+ SRADQN+ +AS+AGPGGWNDPDMLEVGNG M+
Sbjct: 12 PATWARQIGSSWRTTQDIEDKWESIVSRADQNNEYASFAGPGGWNDPDMLEVGNGHMTAE 191
Query: 647 EYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLE 826
EY SHFSIWAL KAPLLIGCDV +M+++T ILSNSEVIAVNQD LGVQGKKV LE
Sbjct: 192 EYVSHFSIWALMKAPLLIGCDVTSMNKKTYRILSNSEVIAVNQDPLGVQGKKVSKQVDLE 371
Query: 827 VWAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFSA 985
VWAGPLSNNR AVVLWN+ +ATITA+W IGL S V R+LW H A
Sbjct: 372 VWAGPLSNNRVAVVLWNKSNSRATITAKWEDIGLNPSAVVRVRNLWRHRELEA 530
Score = 187 bits (403), Expect(2) = 8e-048
Identities = 94/173 (54%), Positives = 111/173 (64%)
Frame = -1 / -3
Query: 984 AENDECAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDC 805
A N C H+ +T E +P+ H AV+VA F RTTA LL GPA TS+
Sbjct: 529 ASNSLCLHKFLTLTTAEGFNPISSHLAVIVALELLLFHRTTATRLLDKGPAHTSRSTCLL 350
Query: 804 TFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPL 625
TFFPCTP+ S TA+TSELL + V I TSHPI SGA AQMLK E YS++ M P
Sbjct: 349 TFFPCTPKGS*LTAITSELLRIR*VFLFIDVTSHPINSGAFIRAQMLKCETYSSAVMWPF 170
Query: 624 PTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAG 466
PTS++SGSFHPPGPA A+ F SARD ML LS++S VVLQL P+ AQVAG
Sbjct: 169 PTSNISGSFHPPGPAKLAYSLF*SARDTMLSHLSSMSCVVLQLLPICRAQVAG 11
Score = 36.8 bits (74), Expect(2) = 6e-083
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 986 QGQLSASVPPHDCKMYVLT 1042
+G L+ASV PH C+MYVLT
Sbjct: 537 EGSLTASVKPHGCRMYVLT 593
Score = 24.4 bits (47), Expect(2) = 8e-048
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 1041 VKTYILQS*GGTEADSWP 988
VKTYIL *G TEA P
Sbjct: 592 VKTYILHP*GFTEAVRLP 539
>gb|DR016795.1|DR016795 STRS1_12_F01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_12_F01_A034 3', mRNA sequence
Length = 872
Score = 287 bits (621), Expect(2) = 8e-082
Identities = 116/169 (68%), Positives = 132/169 (78%)
Frame = +2 / +2
Query: 488 MGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFS 667
+G+SWRTT+DI D W S+ SRADQN+ +AS+AGPGGWNDPDMLEVGNG M++ EY SHFS
Sbjct: 5 IGSSWRTTEDIEDKWXSIVSRADQNNEYASFAGPGGWNDPDMLEVGNGHMTDEEYVSHFS 184
Query: 668 IWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLS 847
IWAL KAPLLIGCDV +M ++T GILSNSEVIAVNQD LGVQGKKV LEVWAGPLS
Sbjct: 185 IWALMKAPLLIGCDVTSMDKKTYGILSNSEVIAVNQDPLGVQGKKVSKQVDLEVWAGPLS 364
Query: 848 NNRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFSAQGQ 994
NNR AVVLWN+ +ATITA+W IGL S V R+LW H A Q
Sbjct: 365 NNRVAVVLWNKSNSRATITAKWEDIGLNPSAVVRVRNLWRHRELEANHQ 511
Score = 187 bits (402), Expect(2) = 1e-047
Identities = 93/169 (55%), Positives = 109/169 (64%)
Frame = -1 / -3
Query: 993 WP*AENDECAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPL 814
W A N C H+ +T E +P+ H AV+VA F RTTA LL GPA TS+
Sbjct: 510 W*FASNSLCLHKFLTLTTAEGFNPISSHLAVIVALELLLFHRTTATRLLDRGPAHTSRST 331
Query: 813 LDCTFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDM 634
TFFPCTP+ S TA+TSELL +P V I TSHPI SGA AQMLK E YS+S M
Sbjct: 330 CLLTFFPCTPKGS*LTAITSELLRIP*VFLSIDVTSHPINSGAFIRAQMLKCETYSSSVM 151
Query: 633 PPLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPM 487
P PTS++SGSFHPPGPA A+ F SARD ML LS++SSVVLQL P+
Sbjct: 150 *PFPTSNISGSFHPPGPAKLAYSLF*SARDTMLSHLSSMSSVVLQLLPI 4
Score = 38.2 bits (77), Expect(2) = 8e-082
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 986 QGQLSASVPPHDCKMYVLT 1042
QG L+ASV PH C+MYVLT
Sbjct: 509 QGSLTASVKPHGCRMYVLT 565
Score = 24.4 bits (47), Expect(2) = 1e-047
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 1041 VKTYILQS*GGTEADSWP 988
VKTYIL *G TEA P
Sbjct: 564 VKTYILHP*GFTEAVRLP 511
>gb|CO198298.1|CO198298 GEO1_12_E02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_12_E02_A029 5', mRNA sequence
Length = 750
Score = 300 bits (649), Expect = 2e-080
Identities = 118/167 (70%), Positives = 133/167 (79%)
Frame = +2 / +3
Query: 470 ATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAE 649
ATWA + NSWRTT DI D W S+TS ADQN++WA+YAGPGGWNDPDMLEVGNG M+ E
Sbjct: 234 ATWAPNIANSWRTTGDIQDKWDSITSLADQNNQWAAYAGPGGWNDPDMLEVGNGNMNTEE 413
Query: 650 YRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEV 829
YRSHFSIWAL KAPLLIGCD+R+ S +T+ IL N EVI VNQD LGVQGKKV LEV
Sbjct: 414 YRSHFSIWALMKAPLLIGCDIRSASSETIQILGNKEVINVNQDRLGVQGKKVSKQGDLEV 593
Query: 830 WAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAH 970
WAG LSN R A+VLWNR G QA+ITA+W+ IGLP + V ARDLWAH
Sbjct: 594 WAGQLSNGRVAIVLWNRSGSQASITAKWTDIGLPYNAVVQARDLWAH 734
Score = 169 bits (363), Expect = 5e-041
Identities = 92/166 (55%), Positives = 102/166 (61%)
Frame = -1 / -3
Query: 966 AHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPCT 787
AH+S A T G PM H AV+ A P F RT A L L S PAQTS+ TFFP T
Sbjct: 730 AHKSLA*TTAL*GRPMSVHLAVIDACEPLLFHRTMATLPLDSCPAQTSRSPCLLTFFP*T 551
Query: 786 PRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSMS 607
P SW T MTS L + IV SHPI GA AQMLK +RYS+ + P PTS+MS
Sbjct: 550 PNRSWLTLMTSLLPKICIVSDDADLISHPISRGAFIKAQMLKCDRYSSVFILPFPTSNMS 371
Query: 606 GSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVA 469
GSFHPPGPA AH F SARDVML LS +S VVLQLF + AQVA
Sbjct: 370 GSFHPPGPAYAAHWLF*SARDVMLSHLS*MSPVVLQLFAILGAQVA 233
>gb|BG318720.1|BG318720 NXPV_016_B04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_016_B04 5' similar to Arabidopsis
thaliana sequence At5g08370 alpha-galactosidase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 531
Score = 298 bits (646), Expect = 4e-080
Identities = 115/170 (67%), Positives = 135/170 (79%)
Frame = +2 / +2
Query: 56 ADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFPSGIKALADYVHAKGLKLG 235
ADA+V+TGL+K+GYEYVNIDDCW E +RD +G+ VA TFPSGIKALADYVH+KGLK G
Sbjct: 2 ADAMVSTGLSKIGYEYVNIDDCWGELNRDNEGNLVAKASTFPSGIKALADYVHSKGLKFG 181
Query: 236 IYSDAGTRTCSQKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMK 415
IYSDAG TC + MPGS +EEQD KTF+SWG+DYLKYDNC + S ERY KMS A+
Sbjct: 182 IYSDAGNYTCDKTMPGSFGYEEQDAKTFASWGVDYLKYDNCFNDDISPKERYPKMSQALT 361
Query: 416 TYGKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQND 565
G+ IF+S+CEWG +NPATWA + NSWRTT DI DNW S+TSRAD ND
Sbjct: 362 NSGRPIFYSMCEWGDENPATWAPKIANSWRTTGDIQDNWDSITSRADMND 511
Score = 111 bits (237), Expect(2) = 1e-036
Identities = 55/102 (53%), Positives = 67/102 (65%)
Frame = -1 / -1
Query: 564 SFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYL 385
SF SA DVML QLS +S VVLQLF + AQVAGF PHSH E + P + A LIF YL
Sbjct: 510 SFMSALDVMLSQLS*MSPVVLQLFAILGAQVAGFSSPHSHIE*NIGRPELVRAWLIFGYL 331
Query: 384 SMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIFWLHV 259
S+ L+ + QLSYF+*S P + V SCSS+ +PG+ HV
Sbjct: 330 SLGLMSSLKQLSYFK*STPHEAKVLASCSSYPKEPGMVLSHV 205
Score = 105 bits (225), Expect = 5e-022
Identities = 55/170 (32%), Positives = 91/170 (53%)
Frame = -3 / -3
Query: 565 VVLVCTRRHAAPVVGDIIGRSPAVPHAACPGSRVLPPPFAQREEDALPIRLHSVAHLRIP 386
++ V +R A P+V ++ SPAV + CP R+L PF E P S+AH +P
Sbjct: 511 IIHVSSRCDAIPIVLNVTSSSPAVCNLGCPSCRILITPFTH*IEYRTP*VSKSLAHFWVP 332
Query: 385 LHDAPAGVVAVVVFQIIDTPGRECLHVLLLVVK*PWHFLAARPCPSIAVDAQLEPLGVHV 206
L A + +++FQ++ +P + +L LV K WH A SI + ++LE V+V
Sbjct: 331 LFRAYVVIKTIIIFQVVYSP*SKGFSILFLVSKGTWHGFVACIISSIRIYSKLESFRVYV 152
Query: 205 VRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTGVDQRIS 56
V E L++ + S+ N+ +L++ V L P IIY+ + ++ L T + IS
Sbjct: 151 VCESLNSGRKR*SLSNQITLIISV*LTPTIIYIHVFISNLG*TSGNHCIS 2
Score = 62.9 bits (131), Expect(2) = 1e-036
Identities = 32/53 (60%), Positives = 36/53 (67%)
Frame = -1 / -1
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASA 55
CT*SA AL+PEG V AT+LP SL S QQSS+ TYS P +PV T ASA
Sbjct: 159 CT*SARALIPEGNVEALATRLPSLSLFSSPQQSSIFTYSYPILDKPVETIASA 1
>gb|DR079447.1|DR079447 RTFEPL1_11_G08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_11_G08_A029 3', mRNA sequence
Length = 863
Score = 282 bits (611), Expect(2) = 5e-080
Identities = 114/164 (69%), Positives = 129/164 (78%)
Frame = +2 / +1
Query: 494 NSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIW 673
+SWRTT+DI D W S+ SRADQN+ +AS+AGPGGWNDPDMLEVGNG M++ EY SHFSIW
Sbjct: 1 SSWRTTEDIEDKWXSIVSRADQNNEYASFAGPGGWNDPDMLEVGNGHMTDEEYVSHFSIW 180
Query: 674 ALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNN 853
AL KAPLLIGCDV +M ++T GILSNSEVIAVNQD LGVQGKKV LEVWAGPLSNN
Sbjct: 181 ALMKAPLLIGCDVTSMDKKTYGILSNSEVIAVNQDPLGVQGKKVSKQVDLEVWAGPLSNN 360
Query: 854 RKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFSA 985
R AVVLWN+ +ATITA+W IGL S V R+LW H A
Sbjct: 361 RVAVVLWNKSNSRATITAKWEDIGLNPSAVVRVRNLWRHRELEA 492
Score = 182 bits (391), Expect(2) = 4e-046
Identities = 91/163 (55%), Positives = 106/163 (65%)
Frame = -1 / -1
Query: 984 AENDECAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDC 805
A N C H+ +T E +P+ H AV+VA F RTTA LL GPA TS+
Sbjct: 491 ASNSLCLHKFLTLTTAEGFNPISSHLAVIVALELLLFHRTTATRLLDRGPAHTSRSTCLL 312
Query: 804 TFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPL 625
TFFPCTP+ S TA+TSELL +P V I TSHPI SGA AQMLK E YS+S M P
Sbjct: 311 TFFPCTPKGS*LTAITSELLRIP*VFLSIDVTSHPINSGAFIRAQMLKCETYSSSVMWPF 132
Query: 624 PTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQL 496
PTS++SGSFHPPGPA A+ F SARD ML LS++SSVVLQL
Sbjct: 131 PTSNISGSFHPPGPAKLAYSLF*SARDTMLSHLSSMSSVVLQL 3
Score = 36.8 bits (74), Expect(2) = 5e-080
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 986 QGQLSASVPPHDCKMYVLT 1042
+G L+ASV PH C+MYVLT
Sbjct: 499 EGSLTASVKPHGCRMYVLT 555
Score = 24.4 bits (47), Expect(2) = 4e-046
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1 / -1
Query: 1041 VKTYILQS*GGTEADSWP 988
VKTYIL *G TEA P
Sbjct: 554 VKTYILHP*GFTEAVRLP 501
>gb|CF389793.1|CF389793 RTDR2_5_C08.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_5_C08_A021 5', mRNA
sequence
Length = 738
Score = 165 bits (355), Expect(2) = 5e-080
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = +2 / +2
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNH+GC INE +I +TADALV++GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 161 NSWNHYGCNINENII*ETADALVSSGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFP 340
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 341 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 433
Score = 154 bits (330), Expect(2) = 5e-080
Identities = 60/104 (57%), Positives = 73/104 (70%)
Frame = +2 / +2
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLC
Sbjct: 425 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLC 604
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASY 580
EWG PATWA +G+SWRTT+DI D W S+ SRADQN+ +AS+
Sbjct: 605 EWGVDVPATWARQIGSSWRTTEDIEDKWESIVSRADQNNEYASF 736
Score = 90.9 bits (192), Expect(2) = 2e-038
Identities = 50/101 (49%), Positives = 58/101 (57%)
Frame = -1 / -1
Query: 573 AHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIF 394
A+ F SARD ML LS++SSVVLQL P+ A VAG PHSH EK + + A IF
Sbjct: 729 AYSLF*SARDTMLSHLSSMSSVVLQLLPICRAHVAGTSTPHSHREKNIGHRVLKSASCIF 550
Query: 393 VYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIF 271
Y L P+ QLSY R*S PQ NV S S +PG F
Sbjct: 549 GYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCSCPKEPGCF 427
Score = 90.0 bits (190), Expect(2) = 2e-038
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = -3 / -3
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++R+ LD RG+ S CN++ +++ +RL PAIIY+ I V QLR+T
Sbjct: 412 PSI*IYSQFEALVVHIIRKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIDVPQLRETT 233
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
Q ISC L+D AA V+PAI
Sbjct: 232 *YQSISCFSYNILIDVAAVVIPAI 161
Score = 74.4 bits (156), Expect(2) = 3e-023
Identities = 40/71 (56%), Positives = 47/71 (66%)
Frame = -1 / -1
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFS 34
CT*SA AL+PEG AT LP+*S SAQQSS+ T P+ RP+ T ASAV + FS
Sbjct: 372 CT*SARALIPEGNFEALATNLPF*SRLGSAQQSSIFT*MYPNLERPLDTKASAVSHIIFS 193
Query: 33 LIPQPKWFQLF 1
L+ QP FQLF
Sbjct: 192 LMLQP**FQLF 160
Score = 55.1 bits (114), Expect(2) = 3e-023
Identities = 29/99 (29%), Positives = 48/99 (48%)
Frame = -3 / -3
Query: 565 VVLVCTRRHAAPVVGDIIGRSPAVPHAACPGSRVLPPPFAQREEDALPIRLHSVAHLRIP 386
+VL+CT A P+V ++ P + P R + PF Q +E P + HL +P
Sbjct: 721 IVLICTGYDAFPLVLNVFCCPPTASNLPSPRGRNIHSPFTQGKEYWPPGSQKCIMHLWVP 542
Query: 385 LHDAPAGVVAVVVFQIIDTPGRECLHVLLLVVK*PWHFL 269
A +V V++F+II P + + + LL+ + W L
Sbjct: 541 AFRLRAIIVTVIIFEIIHAPISKRIGIYLLMSQGTWLLL 425
>gb|DR054462.1|DR054462 RTCA1_17_B10.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_17_B10_A029 5', mRNA sequence
Length = 833
Score = 277 bits (599), Expect(2) = 4e-078
Identities = 112/164 (68%), Positives = 130/164 (79%)
Frame = +2 / -2
Query: 491 GNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSI 670
GNSWRTT DI ++W S+ SR D N+RWA YAGPGGWNDPDMLEVGNG +S EYRSHFS+
Sbjct: 802 GNSWRTTQDINNSWISIASRVDLNERWAHYAGPGGWNDPDMLEVGNGELSREEYRSHFSL 623
Query: 671 WALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSN 850
WAL KAPLLIGCDVR+MS T+ IL N+EVIAVNQD LGVQGKKV S++ LEVWAGPLSN
Sbjct: 622 WALMKAPLLIGCDVRSMSSGTVEILGNAEVIAVNQDPLGVQGKKVYSNDNLEVWAGPLSN 443
Query: 851 NRKAVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFS 982
NR V+L NR +A+ITA+W IGL SS V R+LW + S +
Sbjct: 442 NRMVVILLNRSESRASITAKWEDIGLESSHEVQIRNLWKYKSLA 311
Score = 161 bits (347), Expect = 8e-039
Identities = 83/159 (52%), Positives = 98/159 (61%)
Frame = -1 / +3
Query: 963 HRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPCTP 784
H+ T+ E+ P+ H AV+ A F R T LL GPA TS+ L TF PCTP
Sbjct: 330 HKFLIWTSWEDSRPISSHLAVIEALDSLLFNRITTIRLLDKGPAHTSRLSLL*TFLPCTP 509
Query: 783 RLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSMSG 604
S TA+TS L + V LI TSHPI +GA AQ LK +RYS+ P PTS+MSG
Sbjct: 510 NGS*LTAITSALPRISTVPELIDLTSHPINNGAFIRAQRLKCDRYSSLLNSPFPTSNMSG 689
Query: 603 SFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPM 487
SFHPPGPA* AHLSF S R+ ML QL +S VVLQLFP+
Sbjct: 690 SFHPPGPA*CAHLSFRSTREAMLIQLLLMSCVVLQLFPL 806
Score = 35.9 bits (72), Expect(2) = 4e-078
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2 / -2
Query: 986 QGQLSASVPPHDCKMYVLT 1042
+G L++SV PH CKMYVLT
Sbjct: 301 KGSLTSSVKPHACKMYVLT 245
>gb|CF390626.1|CF390626 RTDR2_20_E02.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_E02_A021 5', mRNA
sequence
Length = 666
Score = 287 bits (621), Expect = 1e-076
Identities = 110/169 (65%), Positives = 130/169 (76%)
Frame = +2 / +3
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNHFGC I+EK++++TADAL+++G KLGYEYVNIDDCWAE RD G VA TFP
Sbjct: 159 NSWNHFGCDIDEKIVRETADALISSGFNKLGYEYVNIDDCWAEQKRDKNGRLVAKASTFP 338
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQKMPGSLDHEEQDVKTFSSWGIDYLKYDNCN 361
SGIKALADYVH KGLKLGIYSDAG RTCS + PGSL +E+ D TF+ WG+DYLKYDNCN
Sbjct: 339 SGIKALADYVHNKGLKLGIYSDAGFRTCSGQQPGSLGYEQIDADTFAEWGVDYLKYDNCN 518
Query: 362 DAGRSVMERYTKMSNAMKTYGKGIFFSLCEWGRQNPATWAGGMGNSWRT 508
G RY +M +A+ G+ IF+SLCEWGR +PAT +GNSWRT
Sbjct: 519 TDGSKPEVRYPRMRDALLRTGRPIFYSLCEWGRDHPATXGAKVGNSWRT 665
Score = 84.5 bits (178), Expect(2) = 1e-033
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = -1 / -3
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFS 34
CT*SA AL+P+G V FAT LP+ S SAQQSS+ TYS PS +P +ASAV L FS
Sbjct: 370 CT*SARALIPDGNVEAFATNLPFLSRFCSAQQSSIFTYSYPSLLKPDEINASAVSLTIFS 191
Query: 33 LIPQPKWFQLF 1
I QPK FQLF
Sbjct: 190 SISQPK*FQLF 158
Score = 80.3 bits (169), Expect(2) = 1e-033
Identities = 40/77 (51%), Positives = 48/77 (62%)
Frame = -1 / -3
Query: 507 VLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR*SIP 328
VLQLFP QVAG LPHSH+E + P + A LI Y + LLP+ LQLSYFR*S P
Sbjct: 664 VLQLFPTLAPQVAG*SLPHSHNE*NIGRPVLRSASLILGYRTSGLLPSVLQLSYFR*STP 485
Query: 327 QDENVFTSCSSWSSDPG 277
NV S S+ ++PG
Sbjct: 484 HSANVSASICSYPNEPG 434
Score = 75.8 bits (159), Expect(2) = 9e-022
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = -3 / -2
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
P I + Q E VH++ + LD R E S CN +S+ + + LRP IIY+ IL+++ +T
Sbjct: 410 PGI*IYPQFESFVVHIISKGLDPRWEC*SFCN*SSIFITLLLRPTIIYIYILISKFVETR 231
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
DQRIS + FL++ AA+V+P I
Sbjct: 230 *DQRISSFSNYFLINIAAKVIPTI 159
Score = 48.7 bits (100), Expect(2) = 9e-022
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = -3 / -2
Query: 502 PAVPHAACPGSRVLPPPFAQREEDALPIRLHSVAHLRIPLHDAPAGVVAVVVFQIIDTPG 323
PA+ + GSR++ PF Q + P + H +P A +A+++F II+ P
Sbjct: 659 PAISNFGSXGSRMISSPFTQ*IKYWTPCSQKCIPHSWVPHFWFAAISIAIIIF*IINPPF 480
Query: 322 RECLHVLLLVVK*PW 278
R+C+ + LL+ +* W
Sbjct: 479 RKCICIYLLISQ*AW 435
>gb|BQ697915.1|BQ697915 NXPV_062_D11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_062_D11 5' similar to Arabidopsis
thaliana sequence At5g08370 alpha-galactosidase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 512
Score = 281 bits (609), Expect = 6e-075
Identities = 110/170 (64%), Positives = 129/170 (75%)
Frame = +2 / +2
Query: 56 ADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFPSGIKALADYVHAKGLKLG 235
ADA+V+TGL+K+GYEYVNIDDCW E +RD +G+ VA TFPSGIKALADYVH+KGLK G
Sbjct: 2 ADAMVSTGLSKIGYEYVNIDDCWGELNRDNEGNLVAKASTFPSGIKALADYVHSKGLKFG 181
Query: 236 IYSDAGTRTCSQKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMK 415
IYSDAG TC + MPGS +EEQD KTF+SWG+DYLKYDNC + S ERY KMS A+
Sbjct: 182 IYSDAGNYTCDKTMPGSFGYEEQDAKTFASWGVDYLKYDNCFNDDISPKERYPKMSQALT 361
Query: 416 TYGKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQND 565
+ IF+S+CEWG PAT + NSWRTT DI DNW +TSRAD ND
Sbjct: 362 NXXRPIFYSMCEWGDXXPATXXPKIANSWRTTGDIQDNWDXITSRADMND 511
Score = 95.0 bits (201), Expect(2) = 1e-031
Identities = 49/102 (48%), Positives = 61/102 (59%)
Frame = -1 / -3
Query: 564 SFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYL 385
SF SA DV QLS +S VVLQLF + VAG PHSH E + + A LIF YL
Sbjct: 510 SFMSALDVXXSQLS*MSPVVLQLFAILGXXVAGXSSPHSHIE*NIGRXXLVRAWLIFGYL 331
Query: 384 SMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIFWLHV 259
S+ L+ + QLSYF+*S P + V SCSS+ +PG+ HV
Sbjct: 330 SLGLMSSLKQLSYFK*STPHEAKVLASCSSYPKEPGMVLSHV 205
Score = 62.9 bits (131), Expect(2) = 1e-031
Identities = 32/53 (60%), Positives = 36/53 (67%)
Frame = -1 / -3
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASA 55
CT*SA AL+PEG V AT+LP SL S QQSS+ TYS P +PV T ASA
Sbjct: 159 CT*SARALIPEGNVEALATRLPSLSLFSSPQQSSIFTYSYPILDKPVETIASA 1
>gb|DR180454.1|DR180454 RTMNUT1_28_E10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_28_E10_A029 5', mRNA sequence
Length = 675
Score = 168 bits (361), Expect(2) = 1e-074
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = +2 / +2
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNH+GC INE +I++TADALV++GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 140 NSWNHYGCNINENIIRETADALVSSGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFP 319
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 320 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 412
Score = 133 bits (285), Expect(2) = 1e-074
Identities = 52/90 (57%), Positives = 61/90 (67%)
Frame = +2 / +2
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLC
Sbjct: 404 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLC 583
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGS 538
EWG PATWA +G+SWRTT+DI D W S
Sbjct: 584 EWGVDVPATWARQIGSSWRTTEDIEDKWES 673
Score = 90.0 bits (190), Expect(2) = 2e-035
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = -3 / -3
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++R+ LD RG+ S CN++ +++ +RL PAIIY+ I V QLR+T
Sbjct: 391 PSI*IYSQFEALVVHIIRKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIDVPQLRETT 212
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
Q ISC L+D AA V+PAI
Sbjct: 211 *YQSISCFSYNILIDVAAVVIPAI 140
Score = 80.3 bits (169), Expect(2) = 2e-035
Identities = 44/90 (48%), Positives = 51/90 (56%)
Frame = -1 / -1
Query: 540 MLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYLSMTLLPAS 361
ML LS++SSVVLQL P+ A VAG PHSH EK + + A IF Y L P+
Sbjct: 675 MLSHLSSMSSVVLQLLPICRAHVAGTSTPHSHREKNIGHRVLKSASCIFGYRLSGLEPSL 496
Query: 360 LQLSYFR*SIPQDENVFTSCSSWSSDPGIF 271
QLSY R*S PQ NV S S +PG F
Sbjct: 495 *QLSYLR*STPQ*ANVSASTCSCPKEPGCF 406
>gb|BQ703220.1|BQ703220 NXSI_121_A01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_121_A01 5' similar to Arabidopsis thaliana
sequence At5g08370 alpha-galactosidase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 551
Score = 269 bits (582), Expect(2) = 4e-073
Identities = 112/167 (67%), Positives = 125/167 (74%)
Frame = +2 / +2
Query: 500 WRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWAL 679
WRTT+DI D W S+ SRADQN+ +AS+AGPGGWNDPDMLEVGNG M+ EY SHFSIWAL
Sbjct: 2 WRTTEDIEDKWESIVSRADQNNEYASFAGPGGWNDPDMLEVGNGHMTAEEYVSHFSIWAL 181
Query: 680 AKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRK 859
KAPLLIGCDV +M ++T GILSNSEVIAVNQD LGVQGKKV LEVWAGPLSNNR
Sbjct: 182 MKAPLLIGCDVTSMDKKTYGILSNSEVIAVNQDPLGVQGKKVSKQVDLEVWAGPLSNNRV 361
Query: 860 AVVLWNRQGYQATITAQWSSIGLPSSTAVTARDLWAHSSFSAQGQLS 1000
AVVL + +ATITA W IGL S V R+LW H A + S
Sbjct: 362 AVVLXXKSNSRATITAXWEDIGLNPSAVVRXRNLWRHREXXANHEXS 502
Score = 167 bits (360), Expect = 1e-040
Identities = 85/157 (54%), Positives = 101/157 (64%)
Frame = -1 / -3
Query: 969 CAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPC 790
C H+ +T E +P+ AV+VA RTTA LL GPA TS+ TFFPC
Sbjct: 471 CLHKFLXLTTAEGFNPISSXXAVIVALELLLXHRTTATRLLDRGPAHTSRSTCLLTFFPC 292
Query: 789 TPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSM 610
TP+ S TA+TSELL +P V I TSHPI SGA AQMLK E YS++ M P PTS++
Sbjct: 291 TPKGS*LTAITSELLRIP*VFLSIDVTSHPINSGAFIRAQMLKCETYSSAVMWPFPTSNI 112
Query: 609 SGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQ 499
SGSFHPPGPA A+ F SARD ML LS++SSVVLQ
Sbjct: 111 SGSFHPPGPAKLAYSLF*SARDTMLSHLSSMSSVVLQ 1
Score = 27.2 bits (53), Expect(2) = 4e-073
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2 / +2
Query: 995 LSASVPPHDCKMYVLT 1042
L+ASV PH C MY T
Sbjct: 503 LTASVKPHGCXMYXXT 550
>gb|BF610498.1|BF610498 NXSI_059_C12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_059_C12 5' similar to Arabidopsis thaliana
sequence At3g56310 alpha-galactosidase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 545
Score = 166 bits (357), Expect(2) = 5e-073
Identities = 62/111 (55%), Positives = 77/111 (69%)
Frame = +2 / +2
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ + IF+SLC
Sbjct: 212 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRRPIFYSLC 391
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWN 601
EWG PATWA +G+SWRTT DI D W S+ AD+N+ +AS+AGP GWN
Sbjct: 392 EWGLDVPATWARQIGSSWRTTQDIEDKWESIVXXADENNEYASFAGPXGWN 544
Score = 129 bits (277), Expect(2) = 5e-073
Identities = 53/73 (72%), Positives = 59/73 (80%)
Frame = +2 / +2
Query: 56 ADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFPSGIKALADYVHAKGLKLG 235
ADALV+ GL+KLGY YVNIDDCWAE +RD G VA+ FPSGIKALADYVH KGLKLG
Sbjct: 2 ADALVSNGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFPSGIKALADYVHNKGLKLG 181
Query: 236 IYSDAGTRTCSQK 274
IYSDAG TC ++
Sbjct: 182 IYSDAGYYTCQKQ 220
Score = 90.4 bits (191), Expect(2) = 3e-031
Identities = 52/110 (47%), Positives = 60/110 (54%)
Frame = -1 / -3
Query: 600 FHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFP 421
FHP GPA A+ F SA ML LS++S VVLQL P+ A VAG PHSH E +
Sbjct: 543 FHPXGPAKLAYSLFSSAXXTMLSHLSSMSCVVLQLLPICRAHVAGTSNPHSHRE*NIGRR 364
Query: 420 YVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIF 271
+ A IF Y L P+ QLSY R*S PQ NV S S +PG F
Sbjct: 363 VLKSASCIFGYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCSCPKEPGCF 214
Score = 66.1 bits (138), Expect(2) = 3e-031
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = -3 / -2
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++ + LD RG+ S CN++ +++ +RL PAIIY+ I + QLR+T
Sbjct: 199 PSI*IYSQFEALVVHIISKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIDIPQLRETI 20
Query: 73 VDQRIS 56
Q IS
Sbjct: 19 *YQSIS 2
>gb|DR179555.1|DR179555 RTMNUT1_22_H06.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_22_H06_A029 5', mRNA sequence
Length = 649
Score = 168 bits (361), Expect(2) = 8e-072
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = +2 / +1
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNH+GC INE +I++TADALV++GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 127 NSWNHYGCNINENIIRETADALVSSGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFP 306
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 307 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 399
Score = 123 bits (264), Expect(2) = 8e-072
Identities = 49/86 (56%), Positives = 58/86 (67%)
Frame = +2 / +1
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLC
Sbjct: 391 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLC 570
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIAD 526
EWG ATWA +G+SWRTT+DI D
Sbjct: 571 EWGVDVSATWARQIGSSWRTTEDIED 648
Score = 90.0 bits (190), Expect(2) = 1e-032
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = -3 / -2
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++R+ LD RG+ S CN++ +++ +RL PAIIY+ I V QLR+T
Sbjct: 378 PSI*IYSQFEALVVHIIRKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIDVPQLRETT 199
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
Q ISC L+D AA V+PAI
Sbjct: 198 *YQSISCFSYNILIDVAAVVIPAI 127
Score = 71.2 bits (149), Expect(2) = 1e-032
Identities = 40/85 (47%), Positives = 47/85 (55%)
Frame = -1 / -3
Query: 525 SAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSY 346
S++SSVVLQL P+ A VA PHSH EK + + A IF Y L P+ QLSY
Sbjct: 647 SSMSSVVLQLLPICRAHVAETSTPHSHREKNIGHRVLKSASCIFGYRLSGLEPSL*QLSY 468
Query: 345 FR*SIPQDENVFTSCSSWSSDPGIF 271
R*S PQ NV S S +PG F
Sbjct: 467 LR*STPQ*ANVSASTCSCPKEPGCF 393
>gb|DR180375.1|DR180375 RTMNUT1_28_E10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_28_E10_A029 3', mRNA sequence
Length = 857
Score = 253 bits (547), Expect(2) = 1e-071
Identities = 104/149 (69%), Positives = 116/149 (77%)
Frame = +2 / +3
Query: 548 RADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQ 727
RADQN+ +AS+AGPGGWNDPDMLEVGNG M++ EY SHFSIWAL KAPLLIGCDV +M +
Sbjct: 3 RADQNNEYASFAGPGGWNDPDMLEVGNGHMTDEEYVSHFSIWALMKAPLLIGCDVTSMDK 182
Query: 728 QTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRKAVVLWNRQGYQATITA 907
+T GILSNSEVIAVNQD LGVQGKKV LEVWAGPLSNNR AVVLWN+ +ATITA
Sbjct: 183 KTYGILSNSEVIAVNQDPLGVQGKKVSKQVDLEVWAGPLSNNRVAVVLWNKSNSRATITA 362
Query: 908 QWSSIGLPSSTAVTARDLWAHSSFSAQGQ 994
+W IGL S V R+LW H A Q
Sbjct: 363 KWEDIGLNPSAVVRVRNLWRHRELEANHQ 449
Score = 160 bits (344), Expect(2) = 9e-040
Identities = 81/149 (54%), Positives = 93/149 (62%)
Frame = -1 / -2
Query: 993 WP*AENDECAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPL 814
W A N C H+ +T E +P+ H AV+VA F RTTA LL GPA TS+
Sbjct: 448 W*FASNSLCLHKFLTLTTAEGFNPISSHLAVIVALELLLFHRTTATRLLDRGPAHTSRST 269
Query: 813 LDCTFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDM 634
TFFPCTPR S TA+TSELL +P V I TSHPI SGA AQMLK E YS+S M
Sbjct: 268 CLLTFFPCTPRGS*LTAITSELLRIP*VFLSIDVTSHPINSGAFIRAQMLKCETYSSSVM 89
Query: 633 PPLPTSSMSGSFHPPGPA*EAHLSFWSAR 547
P PTS++SGSFHPPGPA A+ F SAR
Sbjct: 88 *PFPTSNISGSFHPPGPAKLAYSLF*SAR 2
Score = 38.2 bits (77), Expect(2) = 1e-071
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 986 QGQLSASVPPHDCKMYVLT 1042
QG L+ASV PH C+MYVLT
Sbjct: 447 QGSLTASVKPHGCRMYVLT 503
Score = 24.4 bits (47), Expect(2) = 9e-040
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1 / -2
Query: 1041 VKTYILQS*GGTEADSWP 988
VKTYIL *G TEA P
Sbjct: 502 VKTYILHP*GFTEAVRLP 449
>gb|BM428162.1|BM428162 NXRV_011_D07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_011_D07 5' similar to Arabidopsis thaliana
sequence At5g08370 alpha-galactosidase - like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 606
Score = 161 bits (346), Expect(4) = 8e-070
Identities = 63/109 (57%), Positives = 76/109 (69%)
Frame = +2 / +1
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ IFFSLC
Sbjct: 142 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRWPIFFSLC 321
Query: 449 EWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGG 595
EWG PATWA +G+ WRTT+DI D W S+ SRADQN+ +AS+AG GG
Sbjct: 322 EWGVDVPATWARQIGSXWRTTEDIEDKWESIVSRADQNNEYASFAGXGG 468
Score = 93.6 bits (198), Expect(4) = 1e-034
Identities = 52/108 (48%), Positives = 60/108 (55%)
Frame = -1 / -2
Query: 594 PPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKKMPFPYV 415
PP PA A+ F SARD ML LS++SSVVL P+ A VAG PHSH EK + +
Sbjct: 467 PPXPAKLAYSLF*SARDTMLSHLSSMSSVVLXXLPICRAHVAGTSTPHSHREKNIGHRVL 288
Query: 414 FIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIF 271
A IF Y L P+ QLSY R*S PQ NV S S +PG F
Sbjct: 287 KSASCIFGYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCSCPKEPGCF 144
Score = 81.3 bits (171), Expect(4) = 8e-070
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +2 / +1
Query: 125 AESDRDYQGSFVANRQTFPSGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
AE +RD G VA+ FPSGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 1 AEPNRDQNGRLVASASKFPSGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 150
Score = 49.6 bits (102), Expect(4) = 8e-070
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2 / +2
Query: 593 GWNDPDMLEVGNGGMSEAEYRSHF 664
GWNDPDM EVGNG M++ EY SHF
Sbjct: 467 GWNDPDMXEVGNGHMTD*EYVSHF 538
Score = 47.3 bits (97), Expect(4) = 1e-034
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = -3 / -1
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRL 128
PSI + +Q E L VH++R+ LD RG+ S CN++ +++ +RL
Sbjct: 129 PSI*IYSQFEALVVHIIRKSLDTRGKL*STCNQSPILITIRL 4
Score = 36.3 bits (73), Expect(4) = 1e-034
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / -1
Query: 663 K*ERYSASDMPPLPTSSMSGSFHP 592
K E YS S M P PTS +SGSFHP
Sbjct: 537 KCETYS*SVM*PFPTSXISGSFHP 466
Score = 30.4 bits (60), Expect(4) = 8e-070
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2 / +3
Query: 662 FSIWALAKAPLLIGCDVRAMSQ 727
FSIWA PLL GC +M +
Sbjct: 537 FSIWAXXXXPLLXGCXXTSMXK 602
Score = 25.8 bits (50), Expect(4) = 1e-034
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1 / -3
Query: 708 SHPIRSGALASAQMLK 661
SHP SG AQMLK
Sbjct: 583 SHPXNSGXXXXAQMLK 536
>gb|BX255141.1|BX255141 BX255141 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP111G01, mRNA sequence
Length = 665
Score = 237 bits (513), Expect(2) = 5e-069
Identities = 92/145 (63%), Positives = 109/145 (75%)
Frame = +2 / +1
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNHFGC I+EK++++T DAL+++G KLGYEYVNIDDCWAE RD G VA TFP
Sbjct: 181 NSWNHFGCHIDEKIVRETVDALISSGFNKLGYEYVNIDDCWAEQKRDKNGRLVAKASTFP 360
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQKMPGSLDHEEQDVKTFSSWGIDYLKYDNCN 361
SGIKALADYVH+KGLKLGIYSDAG RTCS + PGSL +E+ D TF+ WG+DYLKYDNCN
Sbjct: 361 SGIKALADYVHSKGLKLGIYSDAGFRTCSGQQPGSLGYEQIDADTFAEWGVDYLKYDNCN 540
Query: 362 DAGRSVMERYTKMSNAMKTYGKGIF 436
G RY +M +A+ G F
Sbjct: 541 TDGSKPEVRYPRMRDALLRQGVQYF 615
Score = 80.8 bits (170), Expect(3) = 2e-026
Identities = 42/71 (59%), Positives = 47/71 (66%)
Frame = -1 / -1
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFS 34
CT*SA AL+P+G V FAT LP+ S SAQQSS+ TYS PS +P AS V L FS
Sbjct: 392 CT*SARALIPDGNVEAFATNLPFLSRFCSAQQSSIFTYSYPSLLKPDEIKASTVSLTIFS 213
Query: 33 LIPQPKWFQLF 1
I QPK FQLF
Sbjct: 212 SIWQPK*FQLF 180
Score = 50.6 bits (104), Expect(3) = 2e-026
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = -1 / -1
Query: 423 PYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPG 277
P + A LI Y + LLP+ LQLSYFR*S P NV S S+ S+PG
Sbjct: 602 PCLRSASLILGYRTSGLLPSVLQLSYFR*STPHSANVSASICSYPSEPG 456
Score = 45.1 bits (92), Expect(2) = 5e-069
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2 / +3
Query: 422 GKGIFFSLCEWGRQNPATW 478
G+ IF+SLCEWGR +PATW
Sbjct: 600 GRXIFYSLCEWGRDHPATW 656
Score = 26.3 bits (51), Expect(3) = 2e-026
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 477 QVAGFCLPHSHSE 439
QVAG LPHSH+E
Sbjct: 655 QVAG*SLPHSHNE 617
>gb|BM158725.1|BM158725 NXLV_039_D05_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_039_D05 5' similar to Arabidopsis thaliana
sequence At5g08370 alpha-galactosidase - like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 513
Score = 257 bits (555), Expect = 2e-067
Identities = 105/150 (70%), Positives = 117/150 (78%)
Frame = +2 / +1
Query: 536 SMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVR 715
S+ SRAD+N+ +AS+AGPGGWNDPDMLEVGNG M+ EY SHFSIWAL KAPLLIGCDV
Sbjct: 22 SIVSRADENNEYASFAGPGGWNDPDMLEVGNGHMTAEEYGSHFSIWALMKAPLLIGCDVT 201
Query: 716 AMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRKAVVLWNRQGYQA 895
+M ++ GILSNSEVIAVNQD LGVQGKKV LEVWAGPLSNNR AVVLWNR +A
Sbjct: 202 SMEKKAYGILSNSEVIAVNQDPLGVQGKKVSKQGDLEVWAGPLSNNRVAVVLWNRSNSRA 381
Query: 896 TITAQWSSIGLPSSTAVTARDLWAHSSFSA 985
TITA+W IGL SS V R+LW H A
Sbjct: 382 TITAKWEDIGLDSSAVVRVRNLWRHRELEA 471
Score = 160 bits (344), Expect = 2e-038
Identities = 79/150 (52%), Positives = 94/150 (62%)
Frame = -1 / -2
Query: 984 AENDECAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDC 805
A N C H+ +T EE +P+ H AV+VA F RTTA LL GPA TS+
Sbjct: 470 ASNSLCLHKFLTLTTAEESNPISSHLAVIVALELLLFHRTTATRLLDRGPAHTSRSPCLL 291
Query: 804 TFFPCTPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPL 625
TFFPCTP+ S TA+TSELL +P + I TS PI GA AQMLK E YS++ M P
Sbjct: 290 TFFPCTPKGS*LTAITSELLRIP*AFFSIDVTSQPINRGAFIRAQMLKCEPYSSAVMWPF 111
Query: 624 PTSSMSGSFHPPGPA*EAHLSFWSARDVML 535
PTS++SGSFHPPGPA A+ F SARD ML
Sbjct: 110 PTSNISGSFHPPGPAKLAYSLFSSARDTML 21
>gb|BQ698213.1|BQ698213 NXPV_067_G07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_067_G07 5' similar to Arabidopsis
thaliana sequence At5g08370 alpha-galactosidase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 463
Score = 257 bits (555), Expect = 2e-067
Identities = 100/151 (66%), Positives = 115/151 (76%)
Frame = +2 / +1
Query: 161 ANRQTFPSGIKALADYVHAKGLKLGIYSDAGTRTCSQKMPGSLDHEEQDVKTFSSWGIDY 340
A TFPSGIKALADYVH+KGLK GIYSDAG TC + MPGS +EEQD KTF+SWG+DY
Sbjct: 1 AKASTFPSGIKALADYVHSKGLKFGIYSDAGNYTCDKTMPGSFGYEEQDAKTFASWGVDY 180
Query: 341 LKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLCEWGRQNPATWAGGMGNSWRTTDDI 520
LKYDNC + S ERY KMS A+ G+ IF+S+CEWG +NPATWA + NSWRTT DI
Sbjct: 181 LKYDNCFNDDISPKERYPKMSQALTNSGRPIFYSMCEWGDENPATWAPKIANSWRTTGDI 360
Query: 521 ADNWGSMTSRADQNDRWASYAGPGGWNDPDM 613
DNW S+TSRAD ND+ A+YA GGWN DM
Sbjct: 361 QDNWDSITSRADMNDKXAAYAXXGGWNXXDM 453
Score = 131 bits (280), Expect(2) = 8e-032
Identities = 65/118 (55%), Positives = 77/118 (65%)
Frame = -1 / -3
Query: 612 MSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPHSHSEKK 433
MS SFHPP A A LSF SA DVML QLS +S VVLQLF + AQVAGF PHSH E
Sbjct: 452 MSXSFHPPXXAYAAXLSFMSALDVMLSQLS*MSPVVLQLFAILGAQVAGFSSPHSHIE*N 273
Query: 432 MPFPYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPGIFWLHV 259
+ P + A LIF YLS+ L+ + QLSYF+*S P + V SCSS+ +PG+ HV
Sbjct: 272 IGRPELVRAWLIFGYLSLGLMSSLKQLSYFK*STPHEAKVLASCSSYPKEPGMVLSHV 99
Score = 27.2 bits (53), Expect(2) = 8e-032
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 213 CT*SASALMPEGKV 172
CT*SA AL+PEG V
Sbjct: 53 CT*SARALIPEGNV 12
>gb|DR686537.1|DR686537 EST1076615 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABH14 3' end, mRNA sequence
Length = 856
Score = 167 bits (360), Expect(3) = 5e-067
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = +2 / +3
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNH+GC INE +I++TADALV+ GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 345 NSWNHYGCNINENIIRETADALVSNGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFP 524
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 525 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 617
Score = 94.5 bits (200), Expect(3) = 5e-067
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = +2 / +3
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ + IF+SLC
Sbjct: 609 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRRPIFYSLC 788
Query: 449 EWGRQNP 469
EWG P
Sbjct: 789 EWGLDVP 809
Score = 85.8 bits (181), Expect(3) = 3e-025
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = -3 / -3
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++ + LD RG+ S CN++ +++ +RL PAIIY+ I + QLR+T
Sbjct: 596 PSI*IYSQFEALVVHIISKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIDIPQLRETI 417
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
Q ISC L+D AA V+PAI
Sbjct: 416 *YQSISCFSYNILIDVAAVVIPAI 345
Score = 46.0 bits (94), Expect(3) = 3e-025
Identities = 27/62 (43%), Positives = 31/62 (50%)
Frame = -1 / -1
Query: 456 PHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPG 277
PHSH E + + A IF Y L P+ QLSY R*S PQ NV S S +PG
Sbjct: 796 PHSHRE*NIGRRVLKSASCIFGYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCSCPKEPG 617
Query: 276 IF 271
F
Sbjct: 616 CF 611
Score = 32.7 bits (65), Expect(3) = 5e-067
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 467 PATWAGGMGNSWRTT 511
PATWA +G+SWRTT
Sbjct: 808 PATWARQIGSSWRTT 852
Score = 22.1 bits (42), Expect(3) = 3e-025
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -3
Query: 510 VVLQLFPMPPAQVAG 466
VVLQL P+ A VAG
Sbjct: 851 VVLQLLPICRAHVAG 807
>gb|AI813019.1|AI813019 2G8 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 665
Score = 247 bits (533), Expect(2) = 1e-065
Identities = 100/147 (68%), Positives = 118/147 (80%)
Frame = +2 / +1
Query: 524 DNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIG 703
++W S+ SR D NDRWA YAGPGGWNDPDMLEVGNG +S EYRSHFS+WAL KAPLLIG
Sbjct: 151 NSWISIASRVDLNDRWAHYAGPGGWNDPDMLEVGNGKLSREEYRSHFSLWALMKAPLLIG 330
Query: 704 CDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRKAVVLWNRQ 883
CDVR+MS + IL+N+EVIAVNQD LGVQGKKV S++ LEVWAGPLSN+R V+L NR+
Sbjct: 331 CDVRSMSSGIVEILNNAEVIAVNQDPLGVQGKKVYSNDNLEVWAGPLSNSRMVVILLNRR 510
Query: 884 GYQATITAQWSSIGLPSSTAVTARDLW 964
+A+ITA+W IGL SS R+LW
Sbjct: 511 ESRASITAKWEDIGLESSHEXQIRNLW 591
Score = 148 bits (317), Expect = 1e-034
Identities = 75/147 (51%), Positives = 90/147 (61%)
Frame = -1 / -1
Query: 966 AHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPCT 787
+H+ + E+ P+ H AV+ A F R T LL GPA TS+ L TF PCT
Sbjct: 593 SHKFLIWXSWEDSRPISSHLAVIEALDSLLFNRITTIRLLDKGPAHTSRLSLLYTFLPCT 414
Query: 786 PRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSMS 607
P S TA+TS LL + + LI TSHPI +GA SAQ LK +RYS+ P PTS+MS
Sbjct: 413 PNGS*LTAITSALLRISTIPELIDLTSHPINNGAFISAQRLKCDRYSSLLNLPFPTSNMS 234
Query: 606 GSFHPPGPA*EAHLSFWSARDVMLPQL 526
GSFHPPGPA* AHLSF S R+ ML QL
Sbjct: 233 GSFHPPGPA*CAHLSFRSTREAMLIQL 153
Score = 24.4 bits (47), Expect(2) = 1e-065
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 986 QGQLSASVPPHDCK 1027
+G L++SV PH CK
Sbjct: 621 KGSLTSSVKPHACK 662
>gb|BQ197470.1|BQ197470 NXLV114_G11_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV114_G11 5' similar to Arabidopsis thaliana
sequence At3g56310 alpha-galactosidase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 538
Score = 147 bits (315), Expect(2) = 4e-064
Identities = 62/100 (62%), Positives = 73/100 (73%)
Frame = +2 / +3
Query: 647 EYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEVIAVNQDSLGVQGKKVQSSNGLE 826
EYRSH +WAL KAPLLIGCDVR+MS T+ IL N+EVIAVNQD LGVQGKKV S++ LE
Sbjct: 231 EYRSHCGLWALMKAPLLIGCDVRSMSSGTVEILGNAEVIAVNQDPLGVQGKKVYSNDNLE 410
Query: 827 VWAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPSSTAV 946
VWAGPLSNNR +L N ++A A+W + SS V
Sbjct: 411 VWAGPLSNNRMVXILLNTSEWRAXXXAKWENXXXQSSXEV 530
Score = 119 bits (254), Expect(2) = 4e-064
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +2 / +2
Query: 446 CEWGRQNPATWAGGMGNSWRTTDDIADNWGSMTSRADQNDRWASYAGPGGWNDPDMLEVG 625
C R +PATW +GNSWRTT DI ++W S+ SR D N+RWA YAGPGGWNDPDMLEVG
Sbjct: 29 CNGXRDHPATWGAKVGNSWRTTQDINNSWISIASRVDLNERWAHYAGPGGWNDPDMLEVG 208
Query: 626 NGGMS 640
NG +S
Sbjct: 209 NGELS 223
Score = 86.8 bits (183), Expect(2) = 9e-033
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -1 / -2
Query: 630 PLPTSSMSGSFHPPGPA*EAHLSFWSARDVMLPQLSAISSVVLQLFPMPPAQVAGFCLPH 451
P PTS+MSGSFHPPGPA* AHLSF S R+ ML QL +S VVLQLFP QVAG L
Sbjct: 213 PFPTSNMSGSFHPPGPA*CAHLSFRSTREAMLIQLLLMSCVVLQLFPTLAPQVAG*SLXP 34
Query: 450 SH 445
H
Sbjct: 33 LH 28
Score = 74.8 bits (157), Expect(2) = 9e-033
Identities = 42/102 (41%), Positives = 54/102 (52%)
Frame = -1 / -1
Query: 945 TAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPCTPRLSWFT 766
T+ E+ H A A + F+R LL GPA TS+ L TF PCTP S T
Sbjct: 529 TSXED*XXXFSHLAXXXALHSLVFKRIXTIRLLDKGPAHTSRLSLL*TFLPCTPNGS*LT 350
Query: 765 AMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSAS 640
A+TS L + V LI TSHPI +GA AQ + +RYS++
Sbjct: 349 AITSALPRISTVPELIDLTSHPINNGAFIRAQRPQCDRYSSA 224
>gb|BX250803.1|BX250803 BX250803 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP041D12 similar to ALPHA GALACTOSIDASE
PRECURSOR, mRNA sequence
Length = 674
Score = 160 bits (344), Expect(2) = 1e-063
Identities = 58/91 (63%), Positives = 72/91 (79%)
Frame = +2 / +2
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNHF C +N+ +I++TADA ++TGL+KLGY+Y+NIDDCWAE RD G + TFP
Sbjct: 188 NSWNHFDCNVNDSVIRETADAFISTGLSKLGYKYINIDDCWAEPQRDKDGKLIPRALTFP 367
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
GIKALADYVH KGLK+GIYSDAG TC ++
Sbjct: 368 FGIKALADYVHEKGLKIGIYSDAGQYTCQKQ 460
Score = 104 bits (222), Expect(2) = 1e-063
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = +2 / +2
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL EE+D +TF+ WGIDYLKYDNC D G RY +M +A+ IF+SLC
Sbjct: 452 QKQPGSLGFEEEDARTFAEWGIDYLKYDNCFDDGSKPEVRYPRMRDALLKTDHPIFYSLC 631
Query: 449 EWGRQNPATW 478
EW NPATW
Sbjct: 632 EWXVDNPATW 661
Score = 77.6 bits (163), Expect(2) = 6e-026
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -1 / -3
Query: 213 CT*SASALMPEGKVCLFATKLPW*SLSDSAQQSSMLTYS*PSFARPVLTSASAVCLMSFS 34
CT*SA ALMP G V P SL SAQQSS+L Y PS PV +ASAV LM+ S
Sbjct: 399 CT*SARALMPNGNVKARGINFPSLSLCGSAQQSSILIYLYPSLESPVDINASAVSLMTLS 220
Query: 33 LIPQPKWFQLF 1
Q KWFQLF
Sbjct: 219 FTLQSKWFQLF 187
Score = 61.1 bits (127), Expect(2) = 6e-026
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -1 / -3
Query: 477 QVAGFCLPHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCS 298
QVAG HSH E + + + A LI YL+ P+S QLSY R*SIP NV S S
Sbjct: 660 QVAGLSTXHSHKE*NIGWSVLRSASLILGYLTSGFEPSSKQLSYLR*SIPHSANVRASSS 481
Query: 297 SWSSDPGIF 271
S ++PG F
Sbjct: 480 SNPNEPGCF 454
>gb|DR050367.1|DR050367 RTBOR1_23_B01.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_23_B01_A029 3', mRNA sequence
Length = 780
Score = 167 bits (360), Expect(2) = 7e-063
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = +2 / -1
Query: 2 NSWNHFGCGINEKLIKQTADALVNTGLAKLGYEYVNIDDCWAESDRDYQGSFVANRQTFP 181
NSWNH+GC INE +I++TADALV+ GL+KLGY YVNIDDCWAE +RD G VA+ FP
Sbjct: 465 NSWNHYGCNINENIIRETADALVSNGLSKLGYIYVNIDDCWAEPNRDQNGRLVASASKFP 286
Query: 182 SGIKALADYVHAKGLKLGIYSDAGTRTCSQK 274
SGIKALADYVH KGLKLGIYSDAG TC ++
Sbjct: 285 SGIKALADYVHNKGLKLGIYSDAGYYTCQKQ 193
Score = 94.5 bits (200), Expect(2) = 7e-063
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = +2 / -1
Query: 269 QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKGIFFSLC 448
QK PGSL HE+ D TF+ WG+DYLKYDNC + G RY KM +A+ + IF+SLC
Sbjct: 201 QKQPGSLGHEQVDADTFAYWGVDYLKYDNCYNDGSKPESRYPKMHDALLRTRRPIFYSLC 22
Query: 449 EWGRQNP 469
EWG P
Sbjct: 21 EWGLDVP 1
Score = 85.8 bits (181), Expect(2) = 6e-024
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = -3 / +1
Query: 253 PSIAVDAQLEPLGVHVVRERLDARGEGLSVCNEASLVVPVRLRPAIIYVDILVAQLRQTG 74
PSI + +Q E L VH++ + LD RG+ S CN++ +++ +RL PAIIY+ I + QLR+T
Sbjct: 214 PSI*IYSQFEALVVHIISKSLDTRGKL*STCNQSPILITIRLCPAIIYIYIDIPQLRETI 393
Query: 73 VDQRISCLLDEFLVDPAAEVVPAI 2
Q ISC L+D AA V+PAI
Sbjct: 394 *YQSISCFSYNILIDVAAVVIPAI 465
Score = 46.0 bits (94), Expect(2) = 6e-024
Identities = 27/62 (43%), Positives = 31/62 (50%)
Frame = -1 / +2
Query: 456 PHSHSEKKMPFPYVFIALLIFVYLSMTLLPASLQLSYFR*SIPQDENVFTSCSSWSSDPG 277
PHSH E + + A IF Y L P+ QLSY R*S PQ NV S S +PG
Sbjct: 14 PHSHRE*NIGRRVLKSASCIFGYRLSGLEPSL*QLSYLR*STPQ*ANVSASTCSCPKEPG 193
Query: 276 IF 271
F
Sbjct: 194 CF 199
>gb|CX648034.1|CX648034 COLD1_26_C12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_C12_A029 3', mRNA sequence
Length = 812
Score = 223 bits (482), Expect(2) = 2e-062
Identities = 90/135 (66%), Positives = 103/135 (76%)
Frame = +2 / +3
Query: 581 AGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRAMSQQTMGILSNSEV 760
AGPGGWNDPDMLEVGNG M+ EYRSHFSIWAL KAPLLIGCDVR +S + + IL N EV
Sbjct: 3 AGPGGWNDPDMLEVGNGNMTADEYRSHFSIWALMKAPLLIGCDVRLLSDKILKILGNKEV 182
Query: 761 IAVNQDSLGVQGKKVQSSNGLEVWAGPLSNNRKAVVLWNRQGYQATITAQWSSIGLPSST 940
IAVNQD LGVQG+KV+ + LEVWAGPLSNN +VLWNR +A ITA W IGL SS
Sbjct: 183 IAVNQDPLGVQGRKVRQNGDLEVWAGPLSNNCIVIVLWNRSSSRAMITAHWKDIGLHSSI 362
Query: 941 AVTARDLWAHSSFSA 985
+ R+LW H + +A
Sbjct: 363 SAKVRNLWKHRTLAA 407
Score = 134 bits (288), Expect(2) = 6e-032
Identities = 66/130 (50%), Positives = 78/130 (60%)
Frame = -1 / -2
Query: 969 CAHRSRAVTAVEEGSPMLDHCAVMVAWYPCRFQRTTAFLLLLSGPAQTSKPLLDCTFFPC 790
C H+ + +EE SPM CAV++A F +T L SGPAQTS+ TF PC
Sbjct: 391 CFHKFLTLAEIEE*SPMSFQCAVIIALDELLFHKTITIQLFESGPAQTSRSPFCLTFLPC 212
Query: 789 TPRLSWFTAMTSELLSMPIVCWLIARTSHPIRSGALASAQMLK*ERYSASDMPPLPTSSM 610
TP S TAMTS L + + L TS PI GA AQMLK ERYS++ M P PTS+M
Sbjct: 211 TPSGS*LTAMTSLLPRIFNILSLNNLTSQPISRGAFIRAQMLKCERYSSAVMLPFPTSNM 32
Query: 609 SGSFHPPGPA 580
SGSFHPPGPA
Sbjct: 31 SGSFHPPGPA 2
Score = 37.3 bits (75), Expect(2) = 2e-062
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 986 QGQLSASVPPHDCKMYVLT 1042
+G L+ASV PH CKMYVLT
Sbjct: 414 KGSLTASVKPHACKMYVLT 470
Score = 24.0 bits (46), Expect(2) = 6e-032
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 1041 VKTYILQS*GGTEADSWP 988
VKTYIL +*G T+A P
Sbjct: 469 VKTYILHA*GFTDAVRLP 416
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 757,515,585
Number of Sequences: 355925
Number of extensions: 11738544
Number of successful extensions: 69822
Number of sequences better than 1.0e-020: 184
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 20856671640
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)