TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAM14e11.yg.2.1
         (197 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BD236456.1|  Materials and method for modification of pl...   106   6e-023

>dbj|BD236456.1| Materials and method for modification of plant cell wall
           polysaccharides
          Length = 464

 Score =  106 bits (226), Expect = 6e-023
 Identities = 44/56 (78%), Positives = 52/56 (92%)
 Frame = -2 / +2

                                                                   
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTR 29
           PMVLTGHSLGRNKLEQ+LKQG  SKE+I++TYKIMRRIE EEL LD++ELV+TST+
Sbjct: 290 PMVLTGHSLGRNKLEQLLKQGLHSKEDINATYKIMRRIEAEELCLDSAELVVTSTK 457



  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 114,026,286
Number of Sequences: 355925
Number of extensions: 1285283
Number of successful extensions: 190128
Number of sequences better than 1.0e-020: 1
length of database: 72,425,745
effective HSP length: 46
effective length of database: 56,053,195
effective search space used: 1065010705
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)