TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAC22h02.sg.3.6
(2204 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR684169.1|DR684169 EST1074246 Normalized pine embryo li... 478 e-134
gb|DR693687.1|DR693687 EST1083776 Normalized pine embryo li... 362 7e-099
gb|DT638327.1|DT638327 EST1153258 Normalized pine embryo li... 362 7e-099
gb|CO159937.1|CO159937 FLD1_17_D09.b1_A029 Root flooded Pin... 351 1e-095
gb|DR687407.1|DR687407 EST1077489 Normalized pine embryo li... 210 3e-093
gb|DR081605.1|DR081605 RTFEPL1_30_H04.g1_A029 Roots plus ad... 341 2e-092
dbj|BD236812.1| Materials and method for modification of pl... 339 4e-092
gb|DR078589.1|DR078589 RTFEPL1_5_D12.g1_A029 Roots plus add... 321 1e-086
gb|AW754575.1|AW754575 PC03H04 Pine TriplEx pollen cone lib... 305 9e-082
dbj|BD236808.1| Materials and method for modification of pl... 290 2e-077
dbj|BD236811.1| Materials and method for modification of pl... 281 2e-074
dbj|BD236813.1| Materials and method for modification of pl... 271 1e-071
gb|BX251976.1|BX251976 BX251976 Pinus pinaster differenciat... 270 3e-071
dbj|BD236809.1| Materials and method for modification of pl... 205 8e-052
dbj|BD236810.1| Materials and method for modification of pl... 205 8e-052
gb|BF610181.1|BF610181 NXSI_055_F11_F NXSI (Nsf Xylem Side ... 148 2e-034
gb|BX679414.1|BX679414 BX679414 RS Pinus pinaster cDNA clon... 82 1e-027
>gb|DR684169.1|DR684169 EST1074246 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAP64 3' end, mRNA sequence
Length = 757
Score = 478 bits (1039), Expect = e-134
Identities = 188/238 (78%), Positives = 214/238 (89%)
Frame = +1 / +1
Query: 1060 LEVTHYLGGENYVFWGGREGYQTLLNTDMKRELDHLANFLQAAVDYKKKIGFNGTLLIEP 1239
++VTH LGGEN+VFWGGREGYQT LNTD+K+ELDH+A FLQAAV++KK IGFNGTLLIEP
Sbjct: 40 MQVTHELGGENFVFWGGREGYQTFLNTDLKKELDHMAKFLQAAVNWKKTIGFNGTLLIEP 219
Query: 1240 KPQEPTKHQYDWDVATTFAFLQKYGLTGEFKINVECNHATLSGHSCHHELETARINGLLG 1419
KPQEPTKHQYDWD ATT FLQ+YGL GEFK+NVECNHATLSGHSCHHELE ARI G+LG
Sbjct: 220 KPQEPTKHQYDWDAATTMGFLQRYGLGGEFKLNVECNHATLSGHSCHHELEIARIYGMLG 399
Query: 1420 NIDANTGDPQVGWDTDQFMTDIAEATLVMSSVVKNGGLAPGGFNFDAKLRRESTDVEDMF 1599
NIDANTGD Q GWDTDQF TDI EATL+M +V+KNGGLAPGGFNFDAKLRRES DVED+F
Sbjct: 400 NIDANTGDAQTGWDTDQFPTDIGEATLIMLTVIKNGGLAPGGFNFDAKLRRESVDVEDLF 579
Query: 1600 LAHISGMDTLARGLRNVAKLIEDGSLDDLVRKRYQSFDSEIGALIEAGKGDFETLEKK 1773
+AHISGMDTLARGLRN AKL++DG + +LV KRY++F+S++GALIE G+ FE LEKK
Sbjct: 580 IAHISGMDTLARGLRNAAKLLQDGRMSELVAKRYETFNSKLGALIEDGEVSFEELEKK 753
Score = 314 bits (679), Expect = 2e-084
Identities = 150/242 (61%), Positives = 166/242 (68%)
Frame = -1 / -3
Query: 1772 FFSSVSKSPFPASIKAPISLSKLWYRLRTRSSREPSSISLATLRRPRARVSIPEIWARNM 1593
FFSS SK P+SI+AP K+ R T S PS SLA +PRARVS+P+I A N
Sbjct: 752 FFSSSSKLTSPSSIRAPSFELKVS*RFATSSDILPSCNSLAAFLKPRARVSMPDI*AMNR 573
Query: 1592 SSTSVLSLRNLASKLKPPGASPPFLTTLDITKXXXXXXXXXXXXSQPT*GSPVFASIFPS 1413
SSTS LSLRN ASKL PPGASPPF T+++ K SQP SPVFAS+FPS
Sbjct: 572 SSTSTLSLRNFASKLNPPGASPPFFITVNMIKVASPISVGN*SVSQPVWASPVFASMFPS 393
Query: 1412 SPLIRAVSNS*WQLCPDRVAWLHSTLILNSPVRPYFCRKANVVATSQSYWCFVGSCGLGS 1233
P IRA+S+S* QLCP+RVA LHST LNSP PY CRK VVA SQSYWCFVGSCGLGS
Sbjct: 392 IP*IRAISSS**QLCPERVA*LHSTFNLNSPPSPYLCRKPIVVAASQSYWCFVGSCGLGS 213
Query: 1232 INSVPLNPIFFL*STAA*RKLARWSSSLFISVFRRVW*PSLPPQNT*FSPPR**VTSKAF 1053
I VPL P+ F TAA*R LA WSSS F SVF++VW*PSLPPQ T FSPP VT AF
Sbjct: 212 IRRVPLKPMVFFQFTAA*RNLAIWSSSFFRSVFKKVW*PSLPPQKTKFSPPNSCVTCMAF 33
Query: 1052 LT 1047
T
Sbjct: 32 FT 27
Score = 210 bits (453), Expect = 3e-053
Identities = 92/203 (45%), Positives = 122/203 (60%)
Frame = +3 / +3
Query: 1026 ICLCGCTS*ESFGGHSLPRW*KLCVLGWKRGLPNSSEY*YEERT*PSGXXXXXXXXXQEE 1205
+C+C +S ES G++ R KLC+LGWKR LPN EY* +E *P G +E
Sbjct: 6 LCICCSSSKESHAGNT*IRRRKLCLLGWKRRLPNFLEY*SKEGA*PYGQISSSGRELEEN 185
Query: 1206 DWIQRNTIDRA*TTGTNKTPV*LGCCDYVCFSTEVRSYRRVQD*C*VQPCYSIWTQLPS* 1385
W+Q + + A*TT T KTPV*LGCC+ T++ ++RR+ C*VQ C +W QL S
Sbjct: 186 HWLQWDPSN*A*TTRTYKTPV*LGCCNNYGLPTKIWAWRRI*IKC*VQSCNPLWAQLSSR 365
Query: 1386 IGDCTD*WAAWKYRCKHW*SSSWLGHRSVHDRHCRGYFGYVKCS*EWWTCTWWFQL*CQI 1565
G+ TD W AWK+ CKHW + LG+ S+ + R F +V C EWW CTWW QL*C+I
Sbjct: 366 AGNSTDLWDAWKH*CKHWRCPNRLGY*SISYGYWRSNFNHVDCYKEWWACTWWVQL*CKI 545
Query: 1566 AEGKY*C*GHVSCPYLRNGHPGT 1634
AE + C + C Y+ +GH T
Sbjct: 546 AERECRCGRSIHCSYIGHGHSCT 614
Score = 165 bits (355), Expect(2) = 5e-048
Identities = 76/174 (43%), Positives = 107/174 (61%)
Frame = -3 / -2
Query: 1755 KVSFPSLDQGTNLTIKALVPLADKII*GTILNQLGNVTEATCQGVHSGDMGKKHVLNIST 1576
K L+Q + I+ + +K+ +IL QL +++A C+ VH+ M + + +I T
Sbjct: 735 KTDLSILNQSS*F*IEGFITFCNKL*HSSILQQLSRISQAPCKSVHARYMSNE*IFHIYT 556
Query: 1575 FPPQFGIKVETTRCKSTILNYT*HNQSSLCNVCHELICVPTNLRITSVCIDISKQPINPC 1396
PQF IKVE TRCK TIL + H+ S N+ +LI +P L I+SVCI++SK PINPC
Sbjct: 555 LSPQFCIKVEPTRCKPTILYNSQHD*SCFSNIRRKLISIPACLGISSVCINVSKHPINPC 376
Query: 1395 SLQFMMAAVSR*SSMVALNINLELSCKTVLL*KSKRSRNIPVILVFCWFLWFRL 1234
Q +M AV R M+ALNI + S K + L*++ +IP+ILVFC FLWFRL
Sbjct: 375 YFQLVMTAVPREGCMIALNI*FKFSSKPISL*EAHSCCSIPIILVFCRFLWFRL 214
Score = 121 bits (259), Expect(2) = 4e-035
Identities = 65/135 (48%), Positives = 80/135 (59%)
Frame = +2 / +2
Query: 1235 SLNHRNQQNTSMTGMLRLRLLFYRSTVLQESSRLMLSATMLLYLDTAAIMNWRLHGLMGC 1414
SLNH+N QNTSM GML+ Y+ L+E+ MLSA M L TA I +W+ HG MGC
Sbjct: 215 SLNHKNLQNTSMIGMLQQLWASYKDMGLEENLN*MLSAIMQPSLGTAVITSWK*HGFMGC 394
Query: 1415 LEISMQTLVILKLVGTQISS*QTLQRLLWLCQV*LRMVDLHLVVSTLMPNCGGKVLMLRT 1594
LE MQTL + K G I+ + L++ L C + RMV LHLV STLM NCG +V M +
Sbjct: 395 LETLMQTLEMPKQAGILINFLRILEKQL*SC*LL*RMVGLHLVGSTLMQNCGERV*MWKI 574
Query: 1595 CFLPISPEWTPWHVA 1639
L I WT H A
Sbjct: 575 YSLLIYRAWTLLHGA 619
Score = 48.7 bits (100), Expect(2) = 4e-035
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = +2 / +2
Query: 1025 YMLMRLHKLRKLWRSLTT*VVKTMCSGVEERVTKLF*ILI*RENLTIW 1168
+M M K RK R * KT+ SGVEE+VTKL *ILI*R +LTIW
Sbjct: 5 FMHMLQLK*RKPCR*HMN*EEKTLSSGVEEKVTKLS*ILI*RRSLTIW 148
Score = 47.8 bits (98), Expect(2) = 5e-048
Identities = 27/52 (51%), Positives = 28/52 (53%)
Frame = -2 / -1
Query: 1183 LEES*PDGQVLSSYQYSEEFGNPLFHPRTHSFHHLGSE*PPKLS*LVQPHKH 1028
LEE P GQ S QYS +FGN LFHPR SF L P LS L H H
Sbjct: 163 LEEIWPYGQAPSLDQYSRKFGNLLFHPRRQSFLLLIHVLPAWLSLLELQHMH 8
>gb|DR693687.1|DR693687 EST1083776 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE289 3' end, mRNA sequence
Length = 733
Score = 362 bits (784), Expect = 7e-099
Identities = 135/161 (83%), Positives = 150/161 (93%)
Frame = +1 / +1
Query: 535 DWEGEFFPGVPKIKYEGPTSKNPLAYKWYNKEEVILGKKMKDWMRFSVAFWHTFRGTGAD 714
+WEGEFFPG+PKI YEGP SKNPLAYKWYN EE ILGKKMKDW+RFSVAFWHTFRGTGAD
Sbjct: 235 EWEGEFFPGIPKINYEGPLSKNPLAYKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGAD 414
Query: 715 PFGAPTKTWPWEDGTNSLAMAKRRMRAHFEFMEKLGVDKWCFHDRDIAPDGKTLEETNSN 894
PFGAPTK+WPWEDGTNSLAMA RRMRA+FEF++KLGV++WCFHDRDIAPDG+TL E+N+N
Sbjct: 415 PFGAPTKSWPWEDGTNSLAMALRRMRANFEFLKKLGVERWCFHDRDIAPDGRTLAESNAN 594
Query: 895 LDEIVQLAKQLQGETNIKPLWGTAQLFMHPRYMHGAATSPE 1017
LD +V LAKQLQ T I+PLWGTAQLFMHPRYMHGAATSP+
Sbjct: 595 LDAVVALAKQLQEGTEIRPLWGTAQLFMHPRYMHGAATSPD 717
Score = 235 bits (507), Expect = 1e-060
Identities = 108/159 (67%), Positives = 114/159 (71%)
Frame = -1 / -3
Query: 1025 TLTSGLVAAPCM*RGCIKSCAVPHNGFILVSPCSCFASWTISSKLEFVSSRVFPSGAISL 846
T SGLVAAPCM*RGCI + AVPH G I V SC A T +S+L F S+ V PSGAIS
Sbjct: 725 TCISGLVAAPCM*RGCINNWAVPHRGRISVPS*SCLARATTASRLAFDSASVLPSGAISR 546
Query: 845 SWKHHLSTPNFSMNSKXXXXXXXXXAKEFVPSSQGQVFVGAPKGSAPVPRNVCQNATLKR 666
S KHHLSTPNF NSK A EFVPSS GQ+FVGAP GSAPVPRNVCQ ATL
Sbjct: 545 S*KHHLSTPNFLRNSKFALILRRAIANEFVPSSHGQLFVGAPNGSAPVPRNVCQKATLNL 366
Query: 665 IQSFIFLPRITSSLLYHL*ARGFLLVGPSYLIFGTPGKN 549
QSFIF PRI+SS LYHL ARGFLL GPS IFG PGKN
Sbjct: 365 NQSFIFFPRISSSALYHLYARGFLLNGPS*FIFGIPGKN 249
Score = 133 bits (286), Expect = 3e-030
Identities = 73/158 (46%), Positives = 88/158 (55%)
Frame = -2 / -1
Query: 1006 *QRHACNEDA*RAVQYPTMALYWSHPAAALPAGLSHPS*NLFLQESSHPGQYPCHGSTIC 827
*Q HAC+ DA* Q+PT + P AA H +L LQ H QYP H ST
Sbjct: 706 *QLHACSGDA*TTGQFPTEDEFQFLPEAAWQEQQQHLDWHLILQVFFHQEQYPGHESTTS 527
Query: 826 QLPTSP*TQSELSFFS*PWPKNLCRPPKAKSL*EHRKDQRQYHGTCARTQH*SASNPSSS 647
QL TS TQ+ LSF P P +LC P A SL E + DQ + HG CAR QH* ++NPS S
Sbjct: 526 QLLTS*ETQNLLSFCVEP*PMSLCHLPMASSLLELQMDQHRSHGMCARKQH*ISTNPSFS 347
Query: 646 YRESLPPCYTTYKQEGSCLLDPHT*FSGRRGRTPPPNH 533
++ESL YTTY EGS DPH+ + +T P H
Sbjct: 346 FQESLLLHYTTYMPEGSYSTDPHSLSLESQEKTRLPTH 233
Score = 128 bits (275), Expect(2) = 3e-034
Identities = 59/121 (48%), Positives = 82/121 (67%)
Frame = -3 / -2
Query: 894 VRICFFKSLPIRGNIPVMEAPFVNSQLLHELKVSSHSSLSHGQRICAVLPRPSLCRSTER 715
+ I F K IR NIPVM+AP +NS LL +LK+ SHS+ SH Q +CA+ P P+LC S++
Sbjct: 594 IGI*FCKCSSIRSNIPVMKAPPLNS*LLEKLKICSHSA*SHSQ*VCAIFPWPALCWSSKW 415
Query: 714 ISASTTERVPERNTEAHPILHLLTENHFLLVIPLISKRVLACWTLILDFRDAGEELPLPI 535
IS TE VPE NT++ PILH L++N F +IPLI +RVL TLI+ + ++L P+
Sbjct: 414 ISTGPTECVPESNTKSQPILHFLSKNLFFCIIPLICQRVLTQRTLIVYLWNPRKKLAFPL 235
Query: 534 I 532
+
Sbjct: 234 M 232
Score = 97.7 bits (207), Expect(2) = 1e-025
Identities = 55/118 (46%), Positives = 74/118 (62%)
Frame = +3 / +3
Query: 534 *LGGGVLPRRPENQV*GSNKQEPSCL*VV*QGGSDSR*EDEGLDALQCCVLAHVPWYWR* 713
*+G V ++++*GS + EPS +*VV* DS E+EGL + CC LAH+PW *
Sbjct: 234 *VGRRVFSWDSKDKL*GSVE*EPSGI*VV*CRRRDSWKENEGLVEI*CCFLAHIPWDRC* 413
Query: 714 SFRCSYKDLALGGRHKFFGHG*EKNESSL*VHGEVGS*QMVLP*QGYCPGWEDS*RNK 887
S S K+LA+G HK G+G +NES *V EV S*++VL * GYC W+++ R K
Sbjct: 414 SIWSSNKELAMGRWHKLIGYGSTQNESKF*VSQEVRS*EVVLS*PGYCS*WKNTCRIK 587
Score = 40.5 bits (82), Expect(2) = 1e-025
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3 / +3
Query: 918 KAAAG*DQYKAIVGYCTALYASSLHAWRCY*PRG*SIC 1031
+AA+G + + VG C +YAS LHAW CY R +C
Sbjct: 618 QAASGRN*NSSSVGNCPVVYASPLHAWSCYKSRYACLC 731
Score = 38.2 bits (77), Expect(2) = 3e-034
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -3 / -2
Query: 1029 IYFNLWASSSAMHVTRMHKELCSTPQ 952
I ++W SS+MHV MHK+L S+PQ
Sbjct: 729 INMHIWTCSSSMHVAGMHKQLGSSPQ 652
>gb|DT638327.1|DT638327 EST1153258 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHD74 3' end, mRNA sequence
Length = 794
Score = 362 bits (784), Expect = 7e-099
Identities = 135/161 (83%), Positives = 150/161 (93%)
Frame = +1 / +3
Query: 535 DWEGEFFPGVPKIKYEGPTSKNPLAYKWYNKEEVILGKKMKDWMRFSVAFWHTFRGTGAD 714
+WEGEFFPG+PKI YEGP SKNPLAYKWYN EE ILGKKMKDW+RFSVAFWHTFRGTGAD
Sbjct: 243 EWEGEFFPGIPKINYEGPLSKNPLAYKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGAD 422
Query: 715 PFGAPTKTWPWEDGTNSLAMAKRRMRAHFEFMEKLGVDKWCFHDRDIAPDGKTLEETNSN 894
PFGAPTK+WPWEDGTNSLAMA RRMRA+FEF++KLGV++WCFHDRDIAPDG+TL E+N+N
Sbjct: 423 PFGAPTKSWPWEDGTNSLAMALRRMRANFEFLKKLGVERWCFHDRDIAPDGRTLAESNAN 602
Query: 895 LDEIVQLAKQLQGETNIKPLWGTAQLFMHPRYMHGAATSPE 1017
LD +V LAKQLQ T I+PLWGTAQLFMHPRYMHGAATSP+
Sbjct: 603 LDAVVALAKQLQEGTEIRPLWGTAQLFMHPRYMHGAATSPD 725
Score = 240 bits (518), Expect = 3e-062
Identities = 114/172 (66%), Positives = 120/172 (69%)
Frame = -1 / -2
Query: 1064 SKAFLTCXXXXAYTLTSGLVAAPCM*RGCIKSCAVPHNGFILVSPCSCFASWTISSKLEF 885
S AFLT A T SGLVAAPCM*RGCI + AVPH G I V SC A T +S+L F
Sbjct: 772 SIAFLT*AAAYA*TCISGLVAAPCM*RGCINNWAVPHRGRISVPS*SCLARATTASRLAF 593
Query: 884 VSSRVFPSGAISLSWKHHLSTPNFSMNSKXXXXXXXXXAKEFVPSSQGQVFVGAPKGSAP 705
S+ V PSGAIS S KHHLSTPNF NSK A EFVPSS GQ+FVGAP GSAP
Sbjct: 592 DSASVLPSGAISRS*KHHLSTPNFLRNSKFALILRRAIANEFVPSSHGQLFVGAPNGSAP 413
Query: 704 VPRNVCQNATLKRIQSFIFLPRITSSLLYHL*ARGFLLVGPSYLIFGTPGKN 549
VPRNVCQ ATL QSFIF PRI+SS LYHL ARGFLL GPS IFG PGKN
Sbjct: 412 VPRNVCQKATLNLNQSFIFFPRISSSALYHLYARGFLLNGPS*FIFGIPGKN 257
Score = 139 bits (298), Expect = 8e-032
Identities = 81/177 (45%), Positives = 96/177 (54%)
Frame = -2 / -3
Query: 1063 PKLS*LVQPHKHIL*PLG**QRHACNEDA*RAVQYPTMALYWSHPAAALPAGLSHPS*NL 884
P LS*L H H L *Q HAC+ DA* Q+PT + P AA H +L
Sbjct: 771 P*LS*LELQHMHKHAYLDL*QLHACSGDA*TTGQFPTEDEFQFLPEAAWQEQQQHLDWHL 592
Query: 883 FLQESSHPGQYPCHGSTICQLPTSP*TQSELSFFS*PWPKNLCRPPKAKSL*EHRKDQRQ 704
LQ H QYP H ST QL TS TQ+ LSF P P +LC P A SL E + DQ +
Sbjct: 591 ILQVFFHQEQYPGHESTTSQLLTS*ETQNLLSFCVEP*PMSLCHLPMASSLLELQMDQHR 412
Query: 703 YHGTCARTQH*SASNPSSSYRESLPPCYTTYKQEGSCLLDPHT*FSGRRGRTPPPNH 533
HG CAR QH* ++NPS S++ESL YTTY EGS DPH+ + +T P H
Sbjct: 411 SHGMCARKQH*ISTNPSFSFQESLLLHYTTYMPEGSYSTDPHSLSLESQEKTRLPTH 241
Score = 128 bits (275), Expect(2) = 2e-037
Identities = 59/121 (48%), Positives = 82/121 (67%)
Frame = -3 / -1
Query: 894 VRICFFKSLPIRGNIPVMEAPFVNSQLLHELKVSSHSSLSHGQRICAVLPRPSLCRSTER 715
+ I F K IR NIPVM+AP +NS LL +LK+ SHS+ SH Q +CA+ P P+LC S++
Sbjct: 602 IGI*FCKCSSIRSNIPVMKAPPLNS*LLEKLKICSHSA*SHSQ*VCAIFPWPALCWSSKW 423
Query: 714 ISASTTERVPERNTEAHPILHLLTENHFLLVIPLISKRVLACWTLILDFRDAGEELPLPI 535
IS TE VPE NT++ PILH L++N F +IPLI +RVL TLI+ + ++L P+
Sbjct: 422 ISTGPTECVPESNTKSQPILHFLSKNLFFCIIPLICQRVLTQRTLIVYLWNPRKKLAFPL 243
Query: 534 I 532
+
Sbjct: 242 M 240
Score = 97.7 bits (207), Expect(2) = 4e-029
Identities = 55/118 (46%), Positives = 74/118 (62%)
Frame = +3 / +2
Query: 534 *LGGGVLPRRPENQV*GSNKQEPSCL*VV*QGGSDSR*EDEGLDALQCCVLAHVPWYWR* 713
*+G V ++++*GS + EPS +*VV* DS E+EGL + CC LAH+PW *
Sbjct: 242 *VGRRVFSWDSKDKL*GSVE*EPSGI*VV*CRRRDSWKENEGLVEI*CCFLAHIPWDRC* 421
Query: 714 SFRCSYKDLALGGRHKFFGHG*EKNESSL*VHGEVGS*QMVLP*QGYCPGWEDS*RNK 887
S S K+LA+G HK G+G +NES *V EV S*++VL * GYC W+++ R K
Sbjct: 422 SIWSSNKELAMGRWHKLIGYGSTQNESKF*VSQEVRS*EVVLS*PGYCS*WKNTCRIK 595
Score = 52.4 bits (108), Expect(2) = 4e-029
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +3 / +2
Query: 918 KAAAG*DQYKAIVGYCTALYASSLHAWRCY*PRG*SICLCGCTS*ESFG 1064
+AA+G + + VG C +YAS LHAW CY R +C+C +S ES+G
Sbjct: 626 QAASGRN*NSSSVGNCPVVYASPLHAWSCYKSRYACLCICCSSSQESYG 772
Score = 48.7 bits (100), Expect(2) = 2e-037
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -3 / -1
Query: 1065 LQSFLNLCSRISIYFNLWASSSAMHVTRMHKELCSTPQ 952
L SFL+L I I ++W SS+MHV MHK+L S+PQ
Sbjct: 773 LHSFLDLSCSICINMHIWTCSSSMHVAGMHKQLGSSPQ 660
>gb|CO159937.1|CO159937 FLD1_17_D09.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_17_D09_A029 3', mRNA sequence
Length = 760
Score = 351 bits (760), Expect = 1e-095
Identities = 133/161 (82%), Positives = 146/161 (90%)
Frame = +1 / -2
Query: 535 DWEGEFFPGVPKIKYEGPTSKNPLAYKWYNKEEVILGKKMKDWMRFSVAFWHTFRGTGAD 714
+WEGEFFPG+ KIKYEGP SKNPLA+KWYN EE ILGKKMKDW+RFSVAFWHTFRG+GAD
Sbjct: 528 EWEGEFFPGISKIKYEGPLSKNPLAFKWYNAEEEILGKKMKDWLRFSVAFWHTFRGSGAD 349
Query: 715 PFGAPTKTWPWEDGTNSLAMAKRRMRAHFEFMEKLGVDKWCFHDRDIAPDGKTLEETNSN 894
PFGAPTK WPWEDGTNSLAMA RRM+A+FEF+ KLGV+ WCFHDRDIAPDGKTL E+N+N
Sbjct: 348 PFGAPTKNWPWEDGTNSLAMALRRMKANFEFLTKLGVELWCFHDRDIAPDGKTLIESNAN 169
Query: 895 LDEIVQLAKQLQGETNIKPLWGTAQLFMHPRYMHGAATSPE 1017
LD +V LAKQLQ ET I LWGTAQLFMHPRYMHGAATSP+
Sbjct: 168 LDAVVALAKQLQEETGIHTLWGTAQLFMHPRYMHGAATSPD 46
Score = 228 bits (493), Expect = 1e-058
Identities = 107/170 (62%), Positives = 115/170 (67%)
Frame = -1 / +2
Query: 1058 AFLTCXXXXAYTLTSGLVAAPCM*RGCIKSCAVPHNGFILVSPCSCFASWTISSKLEFVS 879
AF T A T TSGLVAAPCM*RGC+ +CAVPH + VS SCFA T +S+L S
Sbjct: 5 AFFT*AAAYA*TRTSGLVAAPCM*RGCMNNCAVPHKV*MPVSS*SCFARATTASRLALDS 184
Query: 878 SRVFPSGAISLSWKHHLSTPNFSMNSKXXXXXXXXXAKEFVPSSQGQVFVGAPKGSAPVP 699
VFPSGA+S S KHH STPN NSK A E VPSS GQ VGAP GSAP+P
Sbjct: 185 MSVFPSGAMSRS*KHHSSTPNLVRNSKFAFILLRAIANELVPSSHGQFLVGAPNGSAPLP 364
Query: 698 RNVCQNATLKRIQSFIFLPRITSSLLYHL*ARGFLLVGPSYLIFGTPGKN 549
RNVCQ ATL QSFIF PRI+SS LYHL ARGFLL GPSY IF PGKN
Sbjct: 365 RNVCQKATLNLSQSFIFFPRISSSALYHLNARGFLLNGPSYFIFEIPGKN 514
Score = 109 bits (233), Expect(2) = 4e-032
Identities = 50/122 (40%), Positives = 75/122 (61%)
Frame = -3 / +1
Query: 894 VRICFFKSLPIRGNIPVMEAPFVNSQLLHELKVSSHSSLSHGQRICAVLPRPSLCRSTER 715
+ I ++ PIR N+ V++AP +NS +LK+ HSS SH + A+ P P L S +
Sbjct: 169 IGIRLYECFPIRSNVTVVKAPQLNS*FS*KLKIRFHSS*SHS**VSAIFPWPVLGWSPKW 348
Query: 714 ISASTTERVPERNTEAHPILHLLTENHFLLVIPLISKRVLACWTLILDFRDAGEELPLPI 535
IS + TE +PE NT++ PILH L++N F +IP +RVL W LIL R++ +E P P
Sbjct: 349 ISPTATECMPESNTKSQPILHFLSKNLFFCIIPFECQRVLTQWPLILYLRNSWKEFPFPF 528
Query: 534 II 529
++
Sbjct: 529 LL 534
Score = 105 bits (225), Expect = 9e-022
Identities = 74/173 (42%), Positives = 84/173 (48%)
Frame = -2 / +3
Query: 1057 LS*LVQPHKHIL*PLG**QRHACNEDA*RAVQYPTMALYWSHPAAALPAGLSHPS*NLFL 878
LS L H H L *Q HACNEDA* VQ+PT P AAL HP + L
Sbjct: 6 LSLLELQHMHKHVHLDS*QLHACNEDA*TTVQFPTKYECQFPPEAALQEPQLHPDWH*TL 185
Query: 877 QESSHPGQYPCHGSTICQLPTSP*TQSELSFFS*PWPKNLCRPPKAKSL*EHRKDQRQYH 698
SH Q ST QL TQ+ LSFF P + C P A S E + DQ H
Sbjct: 186 *VFSHQEQCHGRESTTAQLLI*LETQNSLSFFLEP*LMS*CHLPMASSWLEPQMDQPHCH 365
Query: 697 GTCARTQH*SASNPSSSYRESLPPCYTTYKQEGSCLLDPHT*FSGRRGRTPPP 539
G AR QH* ++NPS S++ESL YT EGS + PHT S R P P
Sbjct: 366 GMYARKQH*ISANPSFSFQESLLLHYTI*MPEGSYSMAPHTLSSKFLERIPLP 524
Score = 89.5 bits (189), Expect(2) = 2e-027
Identities = 48/115 (41%), Positives = 70/115 (60%)
Frame = +3 / -1
Query: 537 LGGGVLPRRPENQV*GSNKQEPSCL*VV*QGGSDSR*EDEGLDALQCCVLAHVPWYWR*S 716
+G G+L R E++V*G+ + EPS + +V* DS E+EGL + CC LA++PW W *S
Sbjct: 526 MGRGILSRNFEDKV*GAIE*EPSGIQMV*CRRRDSWKENEGLAEI*CCFLAYIPWQWG*S 347
Query: 717 FRCSYKDLALGGRHKFFGHG*EKNESSL*VHGEVGS*QMVLP*QGYCPGWEDS*R 881
S ++LA+G H +G +KNES *V + S* +VL +C WE++ R
Sbjct: 346 IWGSNQELAMGRWH*LISYGSKKNESEF*VSN*IRS*AVVLSRP*HCS*WENTHR 182
Score = 55.1 bits (114), Expect(2) = 2e-027
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +3 / -1
Query: 918 KAAAG*DQYKAIVGYCTALYASSLHAWRCY*PRG*SICLCGCTS*ES 1058
KAA+G + + VG CT ++ASSLHAW CY R +C+C +S ES
Sbjct: 145 KAASGGNWHSYFVGNCTVVHASSLHAWSCYESRCTCLCICCSSSKES 5
Score = 50.6 bits (104), Expect(2) = 4e-032
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -3 / +1
Query: 1056 FLNLCSRISIYFNLWASSSAMHVTRMHKELCSTPQ 952
FL L I I +W SS+MHVTRMH++LCS+PQ
Sbjct: 7 FLYLSCSICINTYIWTRSSSMHVTRMHEQLCSSPQ 111
>gb|DR687407.1|DR687407 EST1077489 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABS09 3' end, mRNA sequence
Length = 762
Score = 210 bits (454), Expect(2) = 3e-093
Identities = 78/89 (87%), Positives = 82/89 (92%)
Frame = +1 / +1
Query: 535 DWEGEFFPGVPKIKYEGPTSKNPLAYKWYNKEEVILGKKMKDWMRFSVAFWHTFRGTGAD 714
+WEGEFFPG+PKI YEGP SKNPLAYKWYN EE ILGKKMKDW+RFSVAFWHTFRGTGAD
Sbjct: 235 EWEGEFFPGIPKINYEGPLSKNPLAYKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGAD 414
Query: 715 PFGAPTKTWPWEDGTNSLAMAKRRMRAHF 801
PFGAPTK+WPWED TNSLAMA RRMRA F
Sbjct: 415 PFGAPTKSWPWEDSTNSLAMALRRMRAKF 501
Score = 153 bits (329), Expect(2) = 3e-093
Identities = 57/74 (77%), Positives = 68/74 (91%)
Frame = +1 / +2
Query: 796 HFEFMEKLGVDKWCFHDRDIAPDGKTLEETNSNLDEIVQLAKQLQGETNIKPLWGTAQLF 975
+FEF++KLGV++WCFHDRDIAPDG+TL E+N+NLD +V LAKQLQ T I+PLWGTAQLF
Sbjct: 497 NFEFLKKLGVERWCFHDRDIAPDGRTLAESNANLDAVVALAKQLQEGTEIRPLWGTAQLF 676
Query: 976 MHPRYMHGAATSPE 1017
MHPRYMHGAATSP+
Sbjct: 677 MHPRYMHGAATSPD 718
Score = 128 bits (274), Expect(2) = 2e-056
Identities = 56/72 (77%), Positives = 58/72 (80%)
Frame = -1 / -2
Query: 764 EFVPSSQGQVFVGAPKGSAPVPRNVCQNATLKRIQSFIFLPRITSSLLYHL*ARGFLLVG 585
EFV SS GQ+FVGAP GSAPVPRNVCQ ATL QSFIF PRI+SS LYHL ARGFLL G
Sbjct: 464 EFVLSSHGQLFVGAPNGSAPVPRNVCQKATLNLNQSFIFFPRISSSALYHLYARGFLLNG 285
Query: 584 PSYLIFGTPGKN 549
PS IFG PGKN
Sbjct: 284 PS*FIFGIPGKN 249
Score = 112 bits (240), Expect(2) = 2e-056
Identities = 55/87 (63%), Positives = 59/87 (67%)
Frame = -1 / -1
Query: 1058 AFLTCXXXXAYTLTSGLVAAPCM*RGCIKSCAVPHNGFILVSPCSCFASWTISSKLEFVS 879
AFLT A T SGLVAAPCM*RGCI + AVPH G I V SC A T +S+L F S
Sbjct: 759 AFLT*AAAYA*TCISGLVAAPCM*RGCINNWAVPHRGRISVPS*SCLARATTASRLAFDS 580
Query: 878 SRVFPSGAISLSWKHHLSTPNFSMNSK 798
+ V PSGAIS S KHHLSTPNF NSK
Sbjct: 579 ASVLPSGAISRS*KHHLSTPNFLRNSK 499
Score = 96.4 bits (204), Expect(2) = 3e-029
Identities = 43/94 (45%), Positives = 61/94 (64%)
Frame = -3 / -1
Query: 813 LHELKVSSHSSLSHGQRICAVLPRPSLCRSTERISASTTERVPERNTEAHPILHLLTENH 634
L K SHS+ SH Q +CA+ P P+LC S++ IS TE VPE NT++ PILH L++N
Sbjct: 513 LRNSKFCSHSA*SHSQ*VCAIFPWPALCWSSKWISTGPTECVPESNTKSQPILHFLSKNL 334
Query: 633 FLLVIPLISKRVLACWTLILDFRDAGEELPLPII 532
F +IPLI +RVL TLI+ + ++L P++
Sbjct: 333 FFCIIPLICQRVLTQRTLIVYLWNPRKKLAFPLM 232
Score = 85.4 bits (180), Expect(2) = 1e-021
Identities = 42/87 (48%), Positives = 52/87 (59%)
Frame = -2 / -3
Query: 793 LSFFS*PWPKNLCRPPKAKSL*EHRKDQRQYHGTCARTQH*SASNPSSSYRESLPPCYTT 614
LSF P P +LC P A SL E + DQ + HG CAR QH* ++NPS S++ESL YTT
Sbjct: 493 LSFCVEP*PMSLCYLPMASSLLELQMDQHRSHGMCARKQH*ISTNPSFSFQESLLLHYTT 314
Query: 613 YKQEGSCLLDPHT*FSGRRGRTPPPNH 533
Y EGS DPH+ + +T P H
Sbjct: 313 YMPEGSYSTDPHSLSLESQEKTRLPTH 233
Score = 71.6 bits (150), Expect(3) = 2e-022
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = +3 / +3
Query: 534 *LGGGVLPRRPENQV*GSNKQEPSCL*VV*QGGSDSR*EDEGLDALQCCVLAHVPWYWR* 713
*+G V ++++*GS + EPS +*VV* DS E+EGL + CC LAH+PW *
Sbjct: 234 *VGRRVFSWDSKDKL*GSVE*EPSGI*VV*CRRRDSWKENEGLVEI*CCFLAHIPWDRC* 413
Query: 714 SFRCSYKDLALGGRHKFFGHG*EKNESSL 800
S S K+LA+G HK G+G +NES +
Sbjct: 414 SIWSSNKELAMGR*HKLIGYGSTQNESKI 500
Score = 54.2 bits (112), Expect(2) = 3e-029
Identities = 37/87 (42%), Positives = 43/87 (49%)
Frame = -2 / -2
Query: 1057 LS*LVQPHKHIL*PLG**QRHACNEDA*RAVQYPTMALYWSHPAAALPAGLSHPS*NLFL 878
LS*L H H L *+ HAC+ DA* Q+PT + P AA H +L L
Sbjct: 758 LS*LELQHMHRHAYLDL*RPHACSGDA*TTGQFPTEDEFQFLPEAAWQEQQQHLDWHLIL 579
Query: 877 QESSHPGQYPCHGSTICQLPTSP*TQS 797
Q H QYP H ST QL TS TQ+
Sbjct: 578 QVFFHQEQYPGHESTTSQLLTS*ETQN 498
Score = 43.7 bits (89), Expect(3) = 2e-022
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3 / +1
Query: 918 KAAAG*DQYKAIVGYCTALYASSLHAWRCY*PRG*SICLCGCTS*ESF 1061
+AA+G + + VG C +YAS LHAW Y R +C+C +S ES+
Sbjct: 619 QAASGRN*NSSSVGNCPVVYASPLHAWGRYKSRYACLCICCSSSQESY 762
Score = 43.7 bits (89), Expect(2) = 1e-021
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -3 / -3
Query: 1059 SFLNLCSRISIYFNLWASSSAMHVTRMHKELCSTPQ 952
SFL+L I I ++W S MHV MHK+L S+PQ
Sbjct: 760 SFLDLSCSICIDMHIWTCSGPMHVAGMHKQLGSSPQ 653
Score = 29.9 bits (59), Expect(3) = 2e-022
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3 / +1
Query: 792 SSL*VHGEVGS*QMVLP*QGYCPGWEDS*RNK 887
+ *V EV S*++VL * GYC W+++ R K
Sbjct: 493 AKF*VSQEVRS*EVVLS*PGYCS*WKNTCRIK 588
>gb|DR081605.1|DR081605 RTFEPL1_30_H04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_30_H04_A029 5', mRNA sequence
Length = 680
Score = 341 bits (738), Expect = 2e-092
Identities = 129/156 (82%), Positives = 141/156 (90%)
Frame = +1 / +1
Query: 535 DWEGEFFPGVPKIKYEGPTSKNPLAYKWYNKEEVILGKKMKDWMRFSVAFWHTFRGTGAD 714
+WEGEFFPG+ KIKYEGP SKNPLA+KWYN EE ILGKKMKDW+RFSVAFWHTFRG+GAD
Sbjct: 211 EWEGEFFPGISKIKYEGPLSKNPLAFKWYNAEEEILGKKMKDWLRFSVAFWHTFRGSGAD 390
Query: 715 PFGAPTKTWPWEDGTNSLAMAKRRMRAHFEFMEKLGVDKWCFHDRDIAPDGKTLEETNSN 894
PFGAPTK WPWEDGTNSLAMA RRM+A+FEF+ KLGV+ WCFHDRDIAPDGKTL E+N+N
Sbjct: 391 PFGAPTKNWPWEDGTNSLAMALRRMKANFEFLTKLGVELWCFHDRDIAPDGKTLIESNAN 570
Query: 895 LDEIVQLAKQLQGETNIKPLWGTAQLFMHPRYMHGA 1002
LD +V LAKQLQ ET I LWGTAQLFMHPRYMHGA
Sbjct: 571 LDAVVALAKQLQEETGIHTLWGTAQLFMHPRYMHGA 678
Score = 214 bits (461), Expect = 2e-054
Identities = 97/152 (63%), Positives = 105/152 (69%)
Frame = -1 / -1
Query: 1004 AAPCM*RGCIKSCAVPHNGFILVSPCSCFASWTISSKLEFVSSRVFPSGAISLSWKHHLS 825
AAPCM*RGC+ +CAVPH + VS SCFA T +S+L S VFPSGA+S S KHH S
Sbjct: 680 AAPCM*RGCMNNCAVPHKV*MPVSS*SCFARATTASRLALDSMSVFPSGAMSRS*KHHSS 501
Query: 824 TPNFSMNSKXXXXXXXXXAKEFVPSSQGQVFVGAPKGSAPVPRNVCQNATLKRIQSFIFL 645
TPN NSK A E VPSS GQ VGAP GSAP+PRNVCQ ATL QSFIF
Sbjct: 500 TPNLVRNSKFAFILLRAIANELVPSSHGQFLVGAPNGSAPLPRNVCQKATLNLSQSFIFF 321
Query: 644 PRITSSLLYHL*ARGFLLVGPSYLIFGTPGKN 549
PRI+SS LYHL ARGFLL GPSY IF PGKN
Sbjct: 320 PRISSSALYHLNARGFLLNGPSYFIFEIPGKN 225
Score = 110 bits (234), Expect(2) = 1e-028
Identities = 51/122 (41%), Positives = 75/122 (61%)
Frame = -3 / -3
Query: 894 VRICFFKSLPIRGNIPVMEAPFVNSQLLHELKVSSHSSLSHGQRICAVLPRPSLCRSTER 715
+ I ++ PIR N+ V++AP +NS +LKV HSS SH + A+ P P L S +
Sbjct: 570 IGIRLYECFPIRSNVTVVKAPQLNS*FS*KLKVRFHSS*SHS**VSAIFPWPVLGWSPKW 391
Query: 714 ISASTTERVPERNTEAHPILHLLTENHFLLVIPLISKRVLACWTLILDFRDAGEELPLPI 535
IS + TE +PE NT++ PILH L++N F +IP +RVL W LIL R++ +E P P
Sbjct: 390 ISPTATECMPESNTKSQPILHFLSKNLFFCIIPFECQRVLTQWPLILYLRNSWKEFPFPF 211
Query: 534 II 529
++
Sbjct: 210 LL 205
Score = 104 bits (222), Expect = 2e-021
Identities = 68/155 (43%), Positives = 77/155 (49%)
Frame = -2 / -2
Query: 1003 QRHACNEDA*RAVQYPTMALYWSHPAAALPAGLSHPS*NLFLQESSHPGQYPCHGSTICQ 824
Q HACNEDA* VQ+PT P AAL HP + L SH Q ST Q
Sbjct: 679 QLHACNEDA*TTVQFPTKYECQFPPEAALQEPQLHPDWH*TL*VFSHQEQCHGRESTTAQ 500
Query: 823 LPTSP*TQSELSFFS*PWPKNLCRPPKAKSL*EHRKDQRQYHGTCARTQH*SASNPSSSY 644
L TQS LSFF P + C P A S E + DQ HG AR QH* ++NPS S+
Sbjct: 499 LLI*LETQSSLSFFLEP*LMS*CHLPMASSWLEPQMDQPHCHGMYARKQH*ISANPSFSF 320
Query: 643 RESLPPCYTTYKQEGSCLLDPHT*FSGRRGRTPPP 539
+ESL YT EGS + PHT S R P P
Sbjct: 319 QESLLLHYTI*MPEGSYSMAPHTLSSKFLERIPLP 215
Score = 91.3 bits (193), Expect(2) = 2e-024
Identities = 49/115 (42%), Positives = 71/115 (61%)
Frame = +3 / +3
Query: 537 LGGGVLPRRPENQV*GSNKQEPSCL*VV*QGGSDSR*EDEGLDALQCCVLAHVPWYWR*S 716
+G G+L R E++V*G+ + EPS + +V* DS E+EGL + CC LA++PW W *S
Sbjct: 213 MGRGILSRNFEDKV*GAIE*EPSGIQMV*CRRRDSWKENEGLAEI*CCFLAYIPWQWG*S 392
Query: 717 FRCSYKDLALGGRHKFFGHG*EKNESSL*VHGEVGS*QMVLP*QGYCPGWEDS*R 881
S ++LA+G H +G +KNES L*V + S* +VL +C WE++ R
Sbjct: 393 IWGSNQELAMGRWH*LISYGSKKNESEL*VSN*IRS*AVVLSRP*HCS*WENTHR 557
Score = 42.8 bits (87), Expect(2) = 2e-024
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3 / +3
Query: 918 KAAAG*DQYKAIVGYCTALYASSLHAWRC 1004
KAA+G + + VG CT ++ASSLHAW C
Sbjct: 594 KAASGGNWHSYFVGNCTVVHASSLHAWSC 680
Score = 38.6 bits (78), Expect(2) = 1e-028
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = -3 / -3
Query: 1002 SAMHVTRMHKELCSTPQ 952
S+MHVTRMH++LCS+PQ
Sbjct: 678 SSMHVTRMHEQLCSSPQ 628
>dbj|BD236812.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 530
Score = 339 bits (735), Expect = 4e-092
Identities = 129/176 (73%), Positives = 148/176 (84%)
Frame = +1 / +1
Query: 826 DKWCFHDRDIAPDGKTLEETNSNLDEIVQLAKQLQGETNIKPLWGTAQLFMHPRYMHGAA 1005
++WCFHDRDIAPDG+TL E+N+NLD +V LAKQLQ T I+PLWGTAQLFMHPRYMHGAA
Sbjct: 1 ERWCFHDRDIAPDGRTLAESNANLDAVVALAKQLQEGTEIRPLWGTAQLFMHPRYMHGAA 180
Query: 1006 TSPEXXXXXXXXXXXXXXLEVTHYLGGENYVFWGGREGYQTLLNTDMKRELDHLANFLQA 1185
TSP+ +EVT+ LGGEN+VFWGGREGYQTLLNTD+K+ELDH+A FLQA
Sbjct: 181 TSPDMHVYAYAAAQVKKAMEVTNELGGENFVFWGGREGYQTLLNTDLKKELDHMARFLQA 360
Query: 1186 AVDYKKKIGFNGTLLIEPKPQEPTKHQYDWDVATTFAFLQKYGLTGEFKINVECNH 1353
AV++KK IGFNGTLLIEPKPQEPTKHQYDWD ATT FLQ+YGL EFK+N+ECNH
Sbjct: 361 AVNWKKNIGFNGTLLIEPKPQEPTKHQYDWDAATTMGFLQRYGLADEFKLNIECNH 528
Score = 246 bits (531), Expect = 5e-064
Identities = 117/176 (66%), Positives = 122/176 (69%)
Frame = -1 / -1
Query: 1355 AWLHSTLILNSPVRPYFCRKANVVATSQSYWCFVGSCGLGSINSVPLNPIFFL*STAA*R 1176
AWLHS LNS RPY CRK VVA SQSYWCFVGSCGLGSI VPL PIFF TAA R
Sbjct: 530 AWLHSMFNLNSSARPYLCRKPIVVAASQSYWCFVGSCGLGSIRRVPLKPIFFFQLTAACR 351
Query: 1175 KLARWSSSLFISVFRRVW*PSLPPQNT*FSPPR**VTSKAFLTCXXXXAYTLTSGLVAAP 996
LA WSSS F SVF +V *PSLPPQ T FSPP VTS AFLT A T SGLVAAP
Sbjct: 350 NLAIWSSSFFRSVFSKV**PSLPPQKTKFSPPSSFVTSIAFLT*AAAYA*TCISGLVAAP 171
Query: 995 CM*RGCIKSCAVPHNGFILVSPCSCFASWTISSKLEFVSSRVFPSGAISLSWKHHL 828
CM*RGCI + AVPH G I V SC A T +S+L F S+ V PSGAIS S KHHL
Sbjct: 170 CM*RGCINNWAVPHRGRISVPS*SCLARATTASRLAFDSASVLPSGAISRS*KHHL 3
Score = 120 bits (257), Expect(2) = 3e-027
Identities = 58/131 (44%), Positives = 76/131 (58%)
Frame = +3 / +3
Query: 918 KAAAG*DQYKAIVGYCTALYASSLHAWRCY*PRG*SICLCGCTS*ESFGGHSLPRW*KLC 1097
+ A+G + + VG C +YAS LHAW CY R +C+C +S ES+GG R + C
Sbjct: 93 QTASGRN*NSSSVGNCPVVYASPLHAWSCYKSRYACLCICCSSSQESYGGDK*TRGREFC 272
Query: 1098 VLGWKRGLPNSSEY*YEERT*PSGXXXXXXXXXQEEDWIQRNTIDRA*TTGTNKTPV*LG 1277
LGWKRGL N +EY* E+ T*P G +EE +Q N+ + TT T KTPV*LG
Sbjct: 273 FLGWKRGLSNFAEY*SEKGT*PYG*VSTSSSQLEEEYRLQWNSSN*TQTTRTYKTPV*LG 452
Query: 1278 CCDYVCFSTEV 1310
CC+ F E+
Sbjct: 453 CCNNNGFPAEI 485
Score = 84.0 bits (177), Expect(2) = 4e-024
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = -3 / -3
Query: 1164 MVKFSLHISIQKSLVTLSSTPEHIVFTT*VVSDLQSFLNLCSRISIYFNLWASSSAMHVT 985
MVKF ISIQ+SL+ LSSTPE+ + + * + L SFL+L I I ++W SS+MHV
Sbjct: 339 MVKFLFQISIQQSLIALSSTPENKILSP*FICHLHSFLDLSCSICIDMHIWTCSSSMHVA 160
Query: 984 RMHKELCSTPQ 952
MHK+L S+PQ
Sbjct: 159 GMHKQLGSSPQ 127
Score = 49.2 bits (101), Expect(2) = 4e-024
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -3 / -3
Query: 1353 MVALNINLELSCKTVLL*KSKRSRNIPVILVFCWFLWF 1240
MVALN+ + CK + L ++ +IPVILVFC FLWF
Sbjct: 528 MVALNVQFKFICKAISLQETHCCCSIPVILVFCRFLWF 415
Score = 23.1 bits (44), Expect(2) = 3e-027
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 828 QMVLP*QGYCPGWEDS*RNK 887
++VL * GYC W+++ R K
Sbjct: 3 EVVLS*PGYCS*WKNTCRIK 62
>gb|DR078589.1|DR078589 RTFEPL1_5_D12.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_5_D12_A029 5', mRNA sequence
Length = 722
Score = 321 bits (696), Expect = 1e-086
Identities = 124/157 (78%), Positives = 135/157 (85%)
Frame = +1 / +2
Query: 535 DWEGEFFPGVPKIKYEGPTSKNPLAYKWYNKEEVILGKKMKDWMRFSVAFWHTFRGTGAD 714
+WEGEFFPG+ IKYEGP SKNPLA+KWYN EE ILGKKMKDW+RFSVAFWHTF AD
Sbjct: 251 EWEGEFFPGISNIKYEGPLSKNPLAFKWYNAEEEILGKKMKDWLRFSVAFWHTFLFFWAD 430
Query: 715 PFGAPTKTWPWEDGTNSLAMAKRRMRAHFEFMEKLGVDKWCFHDRDIAPDGKTLEETNSN 894
PFGAP WPWEDGTNSLAMA RRM+A+FEF+ KLGV+ WCFHDRDIAPDGKTL E+N+N
Sbjct: 431 PFGAPIFNWPWEDGTNSLAMALRRMKANFEFLTKLGVELWCFHDRDIAPDGKTLIESNAN 610
Query: 895 LDEIVQLAKQLQGETNIKPLWGTAQLFMHPRYMHGAA 1005
LD +V LAKQLQ ET I LWGTAQLFMHPRYMHGAA
Sbjct: 611 LDAVVALAKQLQEETGIHTLWGTAQLFMHPRYMHGAA 721
Score = 203 bits (437), Expect = 5e-051
Identities = 93/152 (61%), Positives = 103/152 (67%)
Frame = -1 / -3
Query: 1004 AAPCM*RGCIKSCAVPHNGFILVSPCSCFASWTISSKLEFVSSRVFPSGAISLSWKHHLS 825
AAPCM*RGC+ +CAVPH + VS SCFA T +S+L S VFPSGA+S S KHH S
Sbjct: 720 AAPCM*RGCMNNCAVPHKV*MPVSS*SCFARATTASRLALDSMSVFPSGAMSRS*KHHSS 541
Query: 824 TPNFSMNSKXXXXXXXXXAKEFVPSSQGQVFVGAPKGSAPVPRNVCQNATLKRIQSFIFL 645
TPN NSK A E VPSS GQ+ +GAP GSA RNVCQ ATL QSFIF
Sbjct: 540 TPNLVRNSKFAFILLRAIANELVPSSHGQLKIGAPNGSAQKKRNVCQKATLNLSQSFIFF 361
Query: 644 PRITSSLLYHL*ARGFLLVGPSYLIFGTPGKN 549
PRI+SS LYHL ARGFLL GPSY +F PGKN
Sbjct: 360 PRISSSALYHLNARGFLLNGPSYFMFEIPGKN 265
Score = 102 bits (218), Expect(2) = 4e-027
Identities = 48/122 (39%), Positives = 72/122 (59%)
Frame = -3 / -2
Query: 894 VRICFFKSLPIRGNIPVMEAPFVNSQLLHELKVSSHSSLSHGQRICAVLPRPSLCRSTER 715
+ I ++ PIR N+ V++AP +NS +LK+ HSS SH + A+ P P S +
Sbjct: 610 IGIRLYECFPIRSNVTVVKAPQLNS*FS*KLKIRFHSS*SHS**VSAIFPWPVKDWSPKW 431
Query: 714 ISASTTERVPERNTEAHPILHLLTENHFLLVIPLISKRVLACWTLILDFRDAGEELPLPI 535
IS E +PE NT++ PILH L++N F +IP +RVL W LIL R++ +E P P
Sbjct: 430 ISPKKKECMPESNTKSQPILHFLSKNLFFCIIPFECQRVLTQWPLILYVRNSWKEFPFPF 251
Query: 534 II 529
++
Sbjct: 250 LL 245
Score = 40.5 bits (82), Expect(2) = 4e-027
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = -3 / -2
Query: 1005 SSAMHVTRMHKELCSTPQ 952
SS+MHVTRMH++LCS+PQ
Sbjct: 721 SSSMHVTRMHEQLCSSPQ 668
>gb|AW754575.1|AW754575 PC03H04 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC03H04, mRNA sequence
Length = 497
Score = 305 bits (660), Expect = 9e-082
Identities = 116/159 (72%), Positives = 134/159 (84%)
Frame = +1 / +2
Query: 688 HTFRGTGADPFGAPTKTWPWEDGTNSLAMAKRRMRAHFEFMEKLGVDKWCFHDRDIAPDG 867
HTFRGTGADPFGAPTK+WPWEDGTNSLAMA RRMRA+FEF++KLGV++WCFHDRDIAPDG
Sbjct: 20 HTFRGTGADPFGAPTKSWPWEDGTNSLAMALRRMRANFEFLKKLGVERWCFHDRDIAPDG 199
Query: 868 KTLEETNSNLDEIVQLAKQLQGETNIKPLWGTAQLFMHPRYMHGAATSPEXXXXXXXXXX 1047
+TL E+N+NLD +V LAKQLQ T I+PLWGTAQLFMHPRYMHGAATSP+
Sbjct: 200 RTLAESNANLDAVVALAKQLQEGTEIRPLWGTAQLFMHPRYMHGAATSPDMHVYAYAAAQ 379
Query: 1048 XXXXLEVTHYLGGENYVFWGGREGYQTLLNTDMKRELDH 1164
+E+T+ LGGEN+VFWGG EGYQTLLNTD+K+ DH
Sbjct: 380 VKKAMEMTNELGGENFVFWGGXEGYQTLLNTDLKKXXDH 496
Score = 204 bits (441), Expect = 1e-051
Identities = 99/159 (62%), Positives = 105/159 (66%)
Frame = -1 / -3
Query: 1163 WSSSLFISVFRRVW*PSLPPQNT*FSPPR**VTSKAFLTCXXXXAYTLTSGLVAAPCM*R 984
WS F SVF +V *PS PPQ T FSPP V S AFLT A T SGLVAAPCM*R
Sbjct: 495 WSXXFFRSVFSKV**PSXPPQKTKFSPPSSFVISIAFLT*AAAYA*TCISGLVAAPCM*R 316
Query: 983 GCIKSCAVPHNGFILVSPCSCFASWTISSKLEFVSSRVFPSGAISLSWKHHLSTPNFSMN 804
GCI + AVPH G I V SC A T +S+L F S+ V PSGAIS S KHHLSTPNF N
Sbjct: 315 GCINNWAVPHRGRISVPS*SCLARATTASRLAFDSASVLPSGAISRS*KHHLSTPNFLRN 136
Query: 803 SKXXXXXXXXXAKEFVPSSQGQVFVGAPKGSAPVPRNVC 687
SK A EFVPSS GQ+FVGAP GSAPVPRNVC
Sbjct: 135 SKFALILRRAIANEFVPSSHGQLFVGAPNGSAPVPRNVC 19
Score = 109 bits (232), Expect = 1e-022
Identities = 68/154 (44%), Positives = 79/154 (51%)
Frame = -2 / -1
Query: 1147 SYQYSEEFGNPLFHPRTHSFHHLGSE*PPKLS*LVQPHKHIL*PLG**QRHACNEDA*RA 968
S QYS +F +PL HPR + L P LS*L H H L *Q HAC+ DA*
Sbjct: 479 SDQYSAKFDSPLXHPRKQNSLPLVHLSSP*LS*LELQHMHRHAYLDL*QLHACSGDA*TT 300
Query: 967 VQYPTMALYWSHPAAALPAGLSHPS*NLFLQESSHPGQYPCHGSTICQLPTSP*TQSELS 788
Q+PT + P AA H +L LQ H QYP H ST QL TS TQ+ LS
Sbjct: 299 GQFPTEDEFQFLPEAAWQEQQQHLDWHLILQVFFHQEQYPGHESTTSQLLTS*ETQNLLS 120
Query: 787 FFS*PWPKNLCRPPKAKSL*EHRKDQRQYHGTCA 686
F P P +LC P A SL E + DQ + HG CA
Sbjct: 119 FCVEP*PMSLCHLPMASSLLELQMDQHRSHGMCA 18
Score = 81.3 bits (171), Expect(2) = 3e-031
Identities = 37/70 (52%), Positives = 48/70 (68%)
Frame = -3 / -2
Query: 894 VRICFFKSLPIRGNIPVMEAPFVNSQLLHELKVSSHSSLSHGQRICAVLPRPSLCRSTER 715
+ I F K IR NIPVM+AP +NS LL +LK+ SHS+ SH Q +CA+ P P+LC S++
Sbjct: 226 IGI*FCKCSSIRSNIPVMKAPPLNS*LLEKLKICSHSA*SHSQ*VCAIFPWPALCWSSKW 47
Query: 714 ISASTTERVP 685
IS TE VP
Sbjct: 46 ISTGPTECVP 17
Score = 78.5 bits (165), Expect(2) = 6e-028
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = +3 / +1
Query: 918 KAAAG*DQYKAIVGYCTALYASSLHAWRCY*PRG*SICLCGCTS*ESFGGHSLPRW*KLC 1097
+AA+G + + VG C +YAS LHAW CY R +C+C +S ES+G R + C
Sbjct: 250 QAASGRN*NSSSVGNCPVVYASPLHAWSCYKSRYACLCICCSSSQESYGDDK*TRGREFC 429
Query: 1098 VLGWKRGLPNSSEY*YEE 1151
LGW RGL N +EY* E+
Sbjct: 430 FLGWXRGLSNFAEY*SEK 483
Score = 76.2 bits (160), Expect(2) = 3e-031
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = -3 / -2
Query: 1164 MVKFSLHISIQKSLVTLSSTPEHIVFTT*VVSDLQSFLNLCSRISIYFNLWASSSAMHVT 985
MV ISIQ+SL+ LS TPE+ + + * + L SFL+L I I ++W SS+MHV
Sbjct: 496 MVXXLFQISIQQSLIALSXTPENKILSP*FICHLHSFLDLSCSICIDMHIWTCSSSMHVA 317
Query: 984 RMHKELCSTPQ 952
MHK+L S+PQ
Sbjct: 316 GMHKQLGSSPQ 284
Score = 67.5 bits (141), Expect(2) = 6e-028
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = +3 / +1
Query: 687 AHVPWYWR*SFRCSYKDLALGGRHKFFGHG*EKNESSL*VHGEVGS*QMVLP*QGYCPGW 866
AH+PW *S S K+LA+G HK G+G +NES *V EV S*++VL * GYC W
Sbjct: 19 AHIPWDRC*SIWSSNKELAMGRWHKLIGYGSTQNESKF*VSQEVRS*EVVLS*PGYCS*W 198
Query: 867 EDS*RNK 887
+++ R K
Sbjct: 199 KNTCRIK 219
>dbj|BD236808.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 417
Score = 290 bits (628), Expect = 2e-077
Identities = 110/133 (82%), Positives = 123/133 (92%)
Frame = +1 / +1
Query: 1087 ENYVFWGGREGYQTLLNTDMKRELDHLANFLQAAVDYKKKIGFNGTLLIEPKPQEPTKHQ 1266
+++VFWGGREGYQTLLNTD+K+ELDH+A FLQAAV++KK IGFNGTLLIEPKPQEPTKHQ
Sbjct: 16 QSFVFWGGREGYQTLLNTDLKKELDHMAKFLQAAVNWKKTIGFNGTLLIEPKPQEPTKHQ 195
Query: 1267 YDWDVATTFAFLQKYGLTGEFKINVECNHATLSGHSCHHELETARINGLLGNIDANTGDP 1446
YDWD ATT FLQ+YGL GEFK+NVECNHATLSGHSCHHELE A+I G+LGNIDANTGD
Sbjct: 196 YDWDAATTMGFLQRYGLGGEFKLNVECNHATLSGHSCHHELEIAQIYGMLGNIDANTGDA 375
Query: 1447 QVGWDTDQFMTDI 1485
Q GWDTDQF+TDI
Sbjct: 376 QTGWDTDQFLTDI 414
Score = 196 bits (423), Expect = 4e-049
Identities = 87/121 (71%), Positives = 93/121 (76%)
Frame = -1 / -2
Query: 1457 QPT*GSPVFASIFPSSPLIRAVSNS*WQLCPDRVAWLHSTLILNSPVRPYFCRKANVVAT 1278
QP SPVFAS+FPS P I A+S+S* QLCP+RVA LHST LNSP PY CRK VVA
Sbjct: 386 QPVWASPVFASMFPSIP*ICAISSS**QLCPERVA*LHSTFNLNSPPSPYLCRKPIVVAA 207
Query: 1277 SQSYWCFVGSCGLGSINSVPLNPIFFL*STAA*RKLARWSSSLFISVFRRVW*PSLPPQN 1098
SQSYWCFVGSCGLGSI VPL P+ F TAA*R LA WSSS F SVF+RVW*PSLPPQ
Sbjct: 206 SQSYWCFVGSCGLGSIRRVPLKPMVFFQFTAA*RNLAIWSSSFFRSVFKRVW*PSLPPQK 27
Query: 1097 T 1095
T
Sbjct: 26 T 24
Score = 136 bits (291), Expect = 7e-031
Identities = 61/133 (45%), Positives = 81/133 (60%)
Frame = +3 / +3
Query: 1074 LPRW*KLCVLGWKRGLPNSSEY*YEERT*PSGXXXXXXXXXQEEDWIQRNTIDRA*TTGT 1253
+P +LC+LGWKR LPNS EY* +E *P G +E W+Q + + A* T T
Sbjct: 3 VPNSAELCLLGWKRRLPNSLEY*SKEGA*PYGQISSSGRELEENHWLQWDPSN*A*ATRT 182
Query: 1254 NKTPV*LGCCDYVCFSTEVRSYRRVQD*C*VQPCYSIWTQLPS*IGDCTD*WAAWKYRCK 1433
KTPV*LGCC+ T++ ++RR+ C*VQ C +W QL S G+ TD W AWK+ CK
Sbjct: 183 YKTPV*LGCCNNYGLPTKIWAWRRI*IKC*VQSCNPLWAQLSSRAGNSTDLWDAWKH*CK 362
Query: 1434 HW*SSSWLGHRSV 1472
HW + LG+ S+
Sbjct: 363 HWRCPNRLGY*SI 401
Score = 95.0 bits (201), Expect(2) = 5e-026
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = -3 / -1
Query: 1485 NVCHELICVPTNLRITSVCIDISKQPINPCSLQFMMAAVSR*SSMVALNINLELSCKTVL 1306
N+ +LI +P L I+SVCI++SK PIN C Q +M AV R M+ALNI + S K +
Sbjct: 414 NIRKKLISIPACLGISSVCINVSKHPINLCYFQLVMTAVPREGCMIALNI*FKFSSKPIS 235
Query: 1305 L*KSKRSRNIPVILVFCWFLWFRL 1234
L*++ +IP+ILVFC FLW RL
Sbjct: 234 L*EAHSCCSIPIILVFCRFLWLRL 163
Score = 44.6 bits (91), Expect(2) = 5e-026
Identities = 21/37 (56%), Positives = 22/37 (59%)
Frame = -2 / -3
Query: 1183 LEES*PDGQVLSSYQYSEEFGNPLFHPRTHSFHHLGS 1073
LEE P GQ S QYS EFGN LFHPR S G+
Sbjct: 112 LEEIWPYGQAPSLDQYSREFGNLLFHPRRQSSAEFGT 2
>dbj|BD236811.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 421
Score = 281 bits (607), Expect = 2e-074
Identities = 109/139 (78%), Positives = 127/139 (91%)
Frame = +1 / +3
Query: 1306 KYGLTGEFKINVECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFMTDI 1485
+YGL GEFK+NVECNHATLSGHSCHHELE A+I G+LGNIDANTGD Q GWDTDQF+TDI
Sbjct: 3 RYGLGGEFKLNVECNHATLSGHSCHHELEIAQIYGMLGNIDANTGDAQTGWDTDQFLTDI 182
Query: 1486 AEATLVMSSVVKNGGLAPGGFNFDAKLRRESTDVEDMFLAHISGMDTLARGLRNVAKLIE 1665
EATL+M +V+KNGGLAPGGFNFDAKLRRES DVED+F+AHISGMDTLARGLRN AKL++
Sbjct: 183 GEATLIMLTVIKNGGLAPGGFNFDAKLRRESVDVEDLFIAHISGMDTLARGLRNAAKLLQ 362
Query: 1666 DGSLDDLVRKRYQSFDSEI 1722
DG + +LV KRY++F+SE+
Sbjct: 363 DGRMPELVAKRYETFNSEL 419
Score = 156 bits (335), Expect = 6e-037
Identities = 79/139 (56%), Positives = 90/139 (64%)
Frame = -1 / -1
Query: 1724 PISLSKLWYRLRTRSSREPSSISLATLRRPRARVSIPEIWARNMSSTSVLSLRNLASKLK 1545
P S K+ R T S PS SLA +PRARVS+P+I A N SSTS LSLRN ASKL
Sbjct: 421 PSSELKVS*RFATSSGILPSCNSLAAFLKPRARVSMPDI*AMNRSSTSTLSLRNFASKLN 242
Query: 1544 PPGASPPFLTTLDITKXXXXXXXXXXXXSQPT*GSPVFASIFPSSPLIRAVSNS*WQLCP 1365
PPGASPPF T+++ K SQP SPVFAS+FPS P I A+S+S* QLCP
Sbjct: 241 PPGASPPFFITVNMIKVASPISVRN*SVSQPVWASPVFASMFPSIP*ICAISSS**QLCP 62
Query: 1364 DRVAWLHSTLILNSPVRPY 1308
+RVA LHST LNSP PY
Sbjct: 61 ERVA*LHSTFNLNSPPSPY 5
Score = 124 bits (266), Expect = 2e-027
Identities = 57/135 (42%), Positives = 82/135 (60%)
Frame = -3 / -3
Query: 1713 IKALVPLADKII*GTILNQLGNVTEATCQGVHSGDMGKKHVLNISTFPPQFGIKVETTRC 1534
I+ + +K+ +IL QL +++A C+ VH+ M + + +I T PQF IKVE TRC
Sbjct: 410 IEGFITFCNKLWHSSILQQLSRISQAPCKSVHARYMSNE*IFHIYTLSPQFCIKVEPTRC 231
Query: 1533 KSTILNYT*HNQSSLCNVCHELICVPTNLRITSVCIDISKQPINPCSLQFMMAAVSR*SS 1354
K TIL + H+ S N+ +LI +P L I+SVCI++SK PIN C Q +M AV R
Sbjct: 230 KPTILYNSQHD*SCFSNIRKKLISIPACLGISSVCINVSKHPINLCYFQLVMTAVPREGC 51
Query: 1353 MVALNINLELSCKTV 1309
M+ALNI + S K +
Sbjct: 50 MIALNI*FKFSSKPI 6
Score = 123 bits (264), Expect = 4e-027
Identities = 49/110 (44%), Positives = 67/110 (60%)
Frame = +3 / +2
Query: 1305 EVRSYRRVQD*C*VQPCYSIWTQLPS*IGDCTD*WAAWKYRCKHW*SSSWLGHRSVHDRH 1484
++ ++RR+ C*VQ C +W QL S G+ TD W AWK+ CKHW + LG+ S+ +
Sbjct: 2 KIWAWRRI*IKC*VQSCNPLWAQLSSRAGNSTDLWDAWKH*CKHWRCPNRLGY*SISYGY 181
Query: 1485 CRGYFGYVKCS*EWWTCTWWFQL*CQIAEGKY*C*GHVSCPYLRNGHPGT 1634
R F +V C EWW CTWW QL*C+IAE + C + C Y+ +GH T
Sbjct: 182 WRSNFNHVDCYKEWWACTWWVQL*CKIAERECRCGRSIHCSYIGHGHSCT 331
>dbj|BD236813.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 373
Score = 271 bits (586), Expect = 1e-071
Identities = 105/124 (84%), Positives = 113/124 (91%)
Frame = +1 / +2
Query: 1216 NGTLLIEPKPQEPTKHQYDWDVATTFAFLQKYGLTGEFKINVECNHATLSGHSCHHELET 1395
NGTLLIEPKPQEPTKHQYDWD ATT FLQ+YGL GEFK+NVECNHATLSGHSCHHELE
Sbjct: 2 NGTLLIEPKPQEPTKHQYDWDAATTMGFLQRYGLGGEFKLNVECNHATLSGHSCHHELEI 181
Query: 1396 ARINGLLGNIDANTGDPQVGWDTDQFMTDIAEATLVMSSVVKNGGLAPGGFNFDAKLRRE 1575
A+I G+LGNIDANTGD Q GWDTDQF+TDI EATL+M +V+KNGGLAPGGFNFDAKLRRE
Sbjct: 182 AQIYGMLGNIDANTGDAQTGWDTDQFLTDIGEATLIMLTVIKNGGLAPGGFNFDAKLRRE 361
Query: 1576 STDV 1587
S DV
Sbjct: 362 SVDV 373
Score = 179 bits (386), Expect = 5e-044
Identities = 81/124 (65%), Positives = 88/124 (70%)
Frame = -1 / -2
Query: 1586 TSVLSLRNLASKLKPPGASPPFLTTLDITKXXXXXXXXXXXXSQPT*GSPVFASIFPSSP 1407
TS LSLRN ASKL PPGASPPF T+++ K SQP SPVFAS+FPS P
Sbjct: 372 TSTLSLRNFASKLNPPGASPPFFITVNMIKVASPISVRN*SVSQPVWASPVFASMFPSIP 193
Query: 1406 LIRAVSNS*WQLCPDRVAWLHSTLILNSPVRPYFCRKANVVATSQSYWCFVGSCGLGSIN 1227
I A+S+S* QLCP+RVA LHST LNSP PY CRK VVA SQSYWCFVGSCGLGSI
Sbjct: 192 *ICAISSS**QLCPERVA*LHSTFNLNSPPSPYLCRKPIVVAASQSYWCFVGSCGLGSIR 13
Query: 1226 SVPL 1215
VPL
Sbjct: 12 RVPL 1
Score = 139 bits (298), Expect = 8e-032
Identities = 58/117 (49%), Positives = 74/117 (63%)
Frame = +3 / +1
Query: 1236 A*TTGTNKTPV*LGCCDYVCFSTEVRSYRRVQD*C*VQPCYSIWTQLPS*IGDCTD*WAA 1415
A* T T KTPV*LGCC+ T++ ++RR+ C*VQ C +W QL S G+ TD W A
Sbjct: 22 A*ATRTYKTPV*LGCCNNYGLPTKIWAWRRI*IKC*VQSCNPLWAQLSSRAGNSTDLWDA 201
Query: 1416 WKYRCKHW*SSSWLGHRSVHDRHCRGYFGYVKCS*EWWTCTWWFQL*CQIAEGKY*C 1586
WK+ CKHW + LG+ S+ + R F +V C EWW CTWW QL*C+IAE + C
Sbjct: 202 WKH*CKHWRCPNRLGY*SISYGYWRSNFNHVDCYKEWWACTWWVQL*CKIAERECRC 372
Score = 129 bits (276), Expect = 8e-029
Identities = 60/118 (50%), Positives = 77/118 (65%)
Frame = -3 / -1
Query: 1587 NISTFPPQFGIKVETTRCKSTILNYT*HNQSSLCNVCHELICVPTNLRITSVCIDISKQP 1408
+I T PQF IKVE TRCK TIL + H+ S N+ +LI +P L I+SVCI++SK P
Sbjct: 373 HIYTLSPQFCIKVEPTRCKPTILYNSQHD*SCFSNIRKKLISIPACLGISSVCINVSKHP 194
Query: 1407 INPCSLQFMMAAVSR*SSMVALNINLELSCKTVLL*KSKRSRNIPVILVFCWFLWFRL 1234
IN C Q +M AV R M+ALNI + S K + L*++ +IP+ILVFC FLW RL
Sbjct: 193 INLCYFQLVMTAVPREGCMIALNI*FKFSSKPISL*EAHSCCSIPIILVFCRFLWLRL 20
Score = 108 bits (231), Expect = 1e-022
Identities = 57/117 (48%), Positives = 72/117 (61%)
Frame = +2 / +3
Query: 1235 SLNHRNQQNTSMTGMLRLRLLFYRSTVLQESSRLMLSATMLLYLDTAAIMNWRLHGLMGC 1414
SL+H+N QNTSM GML+ Y+ L+E+ MLSA M L TA I +W+ H MGC
Sbjct: 21 SLSHKNLQNTSMIGMLQQLWASYKDMGLEENLN*MLSAIMQPSLGTAVITSWK*HRFMGC 200
Query: 1415 LEISMQTLVILKLVGTQISS*QTLQRLLWLCQV*LRMVDLHLVVSTLMPNCGGKVLM 1585
LE MQTL + K G I+ + L++ L C + RMV LHLV STLM NCG +V M
Sbjct: 201 LETLMQTLEMPKQAGILINFLRILEKQL*SC*LL*RMVGLHLVGSTLMQNCGERV*M 371
>gb|BX251976.1|BX251976 BX251976 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP058A03, mRNA sequence
Length = 604
Score = 270 bits (584), Expect = 3e-071
Identities = 109/149 (73%), Positives = 131/149 (87%)
Frame = +1 / +2
Query: 1408 GLLGNIDANTGDPQVGWDTDQFMTDIAEATLVMSSVVKNGGLAPGGFNFDAKLRRESTDV 1587
G+LGNIDAN+GD Q GWDTDQF TDI EATL+M +V+KNGGLAPGGFNFDAKLRRES DV
Sbjct: 2 GMLGNIDANSGDAQTGWDTDQFPTDIGEATLIMLTVIKNGGLAPGGFNFDAKLRRESVDV 181
Query: 1588 EDMFLAHISGMDTLARGLRNVAKLIEDGSLDDLVRKRYQSFDSEIGALIEAGKGDFETLE 1767
ED+F+AHISGMDTLARGLRN AKL++DG + +LV KRY++F+S++GALIE G+ FE LE
Sbjct: 182 EDLFIAHISGMDTLARGLRNAAKLLQDGRMSELVAKRYETFNSKLGALIEDGEVSFEELE 361
Query: 1768 KKVLEWGEPTVASGKQELAEILFQSAL*M 1854
KK EWGEP ++SGKQELAE++FQS L*+
Sbjct: 362 KKAHEWGEPPLSSGKQELAEMIFQSYL*L 448
Score = 168 bits (361), Expect = 2e-040
Identities = 82/148 (55%), Positives = 94/148 (63%)
Frame = -1 / -2
Query: 1850 YRADWNRISASSCLPDATVGSPHSRTFFSSVSKSPFPASIKAPISLSKLWYRLRTRSSRE 1671
Y+ DW ISASSC PD + GSPHS FFSS SK P+SI+AP K+ R T S
Sbjct: 444 YKYDWKIISASSCFPDDSGGSPHS*AFFSSSSKLTSPSSIRAPSFELKVS*RFATSSDIL 265
Query: 1670 PSSISLATLRRPRARVSIPEIWARNMSSTSVLSLRNLASKLKPPGASPPFLTTLDITKXX 1491
PS SLA +PRARVS+P+I A N SSTS LSLRN ASKL PPGASPPF T++I K
Sbjct: 264 PSCNSLAAFLKPRARVSMPDI*AMNRSSTSTLSLRNFASKLNPPGASPPFFITVNIIKVA 85
Query: 1490 XXXXXXXXXXSQPT*GSPVFASIFPSSP 1407
SQP SP+FAS+FPS P
Sbjct: 84 SPISVGN*SVSQPVWASPLFASMFPSIP 1
>dbj|BD236809.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 314
Score = 205 bits (443), Expect = 8e-052
Identities = 81/104 (77%), Positives = 96/104 (92%)
Frame = +1 / +2
Query: 1432 NTGDPQVGWDTDQFMTDIAEATLVMSSVVKNGGLAPGGFNFDAKLRRESTDVEDMFLAHI 1611
NTGD Q GWDTDQF+TDI+EATL+M +V+KNGGLAPGGFNFDAKLRRES DVED+F+AHI
Sbjct: 2 NTGDAQTGWDTDQFLTDISEATLIMLTVIKNGGLAPGGFNFDAKLRRESVDVEDLFIAHI 181
Query: 1612 SGMDTLARGLRNVAKLIEDGSLDDLVRKRYQSFDSEIGALIEAG 1743
SGMDTLARGLRN A+L++DG+L +LVRKRY+SFDS++GA IE G
Sbjct: 182 SGMDTLARGLRNAAQLLQDGTLTELVRKRYESFDSKLGASIEEG 313
>dbj|BD236810.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 323
Score = 205 bits (443), Expect = 8e-052
Identities = 81/104 (77%), Positives = 96/104 (92%)
Frame = +1 / +2
Query: 1432 NTGDPQVGWDTDQFMTDIAEATLVMSSVVKNGGLAPGGFNFDAKLRRESTDVEDMFLAHI 1611
NTGD Q GWDTDQF+TDI+EATL+M +V+KNGGLAPGGFNFDAKLRRES DVED+F+AHI
Sbjct: 2 NTGDAQTGWDTDQFLTDISEATLIMLTVIKNGGLAPGGFNFDAKLRRESVDVEDLFIAHI 181
Query: 1612 SGMDTLARGLRNVAKLIEDGSLDDLVRKRYQSFDSEIGALIEAG 1743
SGMDTLARGLRN A+L++DG+L +LVRKRY+SFDS++GA IE G
Sbjct: 182 SGMDTLARGLRNAAQLLQDGTLTELVRKRYESFDSKLGASIEEG 313
>gb|BF610181.1|BF610181 NXSI_055_F11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_055_F11 5' similar to Arabidopsis thaliana
sequence At5g57655 xylose isomerase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 413
Score = 148 bits (317), Expect = 2e-034
Identities = 55/73 (75%), Positives = 59/73 (80%)
Frame = +1 / +2
Query: 535 DWEGEFFPGVPKIKYEGPTSKNPLAYKWYNKEEVILGKKMKDWMRFSVAFWHTFRGTGAD 714
+WEGEFFPG+ KIKYEGP SKNPLA+KWYN EE ILGKKMKDW+RFSVAFWHTF A
Sbjct: 194 EWEGEFFPGISKIKYEGPLSKNPLAFKWYNAEEEILGKKMKDWLRFSVAFWHTFXXXXAX 373
Query: 715 PFGAPTKTWPWED 753
GAPTK WED
Sbjct: 374 XXGAPTKNXXWED 412
>gb|BX679414.1|BX679414 BX679414 RS Pinus pinaster cDNA clone RS24H08, mRNA sequence
Length = 214
Score = 82.2 bits (173), Expect(2) = 1e-027
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1 / +1
Query: 1351 HATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDT 1464
H+TLSGH CHHELE RI G+LGNIDANTGD Q GWDT
Sbjct: 4 HSTLSGHRCHHELEITRIYGMLGNIDANTGDAQTGWDT 117
Score = 62.9 bits (131), Expect(2) = 1e-027
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +1 / +3
Query: 1468 QFMTDIAEATLVMSSVVKNGGLAPGGFNFD 1557
+F+TDI+EATL+M +V+KNGGLAPGGFNFD
Sbjct: 123 KFLTDISEATLIMLTVIKNGGLAPGGFNFD 212
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,291,093,947
Number of Sequences: 355925
Number of extensions: 21328709
Number of successful extensions: 96142
Number of sequences better than 1.0e-020: 20
length of database: 72,425,745
effective HSP length: 55
effective length of database: 52,849,870
effective search space used: 35885061730
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)