TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8636641.2.1
(1326 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR024613.1|DR024613 STRS1_66_E01.b1_A034 Shoot tip pitch... 187 9e-085
gb|DR060871.1|DR060871 RTNIT1_30_C05.g1_A029 Roots minus ni... 189 9e-085
gb|CO161849.1|CO161849 FLD1_31_C06.g1_A029 Root flooded Pin... 171 4e-084
gb|DR079785.1|DR079785 RTFEPL1_17_D11.g1_A029 Roots plus ad... 177 6e-084
gb|CF388014.1|CF388014 RTDR1_17_B01.g1_A015 Loblolly pine r... 176 5e-077
gb|CX652982.1|CX652982 COLD1_62_E03.g1_A029 Root cold Pinus... 176 1e-074
gb|DT631437.1|DT631437 EST1146368 Normalized pine embryo li... 174 2e-074
gb|DR050769.1|DR050769 RTBOR1_25_C07.g1_A029 Roots plus add... 177 1e-073
gb|CF387989.1|CF387989 RTDR1_17_C01.g1_A015 Loblolly pine r... 181 3e-072
gb|CO201890.1|CO201890 RTCNT2_8_F12.g1_A029 Root control 2 ... 178 4e-072
gb|DR079581.1|DR079581 RTFEPL1_12_E11.b1_A029 Roots plus ad... 155 1e-071
gb|CF400609.1|CF400609 RTWW1_6_D05.g1_A015 Well-watered lob... 188 2e-071
gb|CF389670.1|CF389670 RTDR2_8_D11.g1_A021 Loblolly pine ro... 129 5e-071
gb|DR090425.1|DR090425 RTAL1_15_A06.b1_A029 Roots plus adde... 177 3e-070
gb|DR019354.1|DR019354 STRS1_29_B03.g1_A034 Shoot tip pitch... 265 4e-070
gb|CF664709.1|CF664709 RTCNT1_11_B04.g1_A029 Root control P... 156 8e-070
gb|DR079660.1|DR079660 RTFEPL1_12_E11.g1_A029 Roots plus ad... 178 5e-069
dbj|BD224562.1| Materials and methods for the modification ... 204 8e-069
gb|DR057895.1|DR057895 RTNIT1_8_A09.g1_A029 Roots minus nit... 100 9e-069
gb|CF671964.1|CF671964 RTCNT1_60_A05.g1_A029 Root control P... 174 1e-068
gb|DR078213.1|DR078213 RTFEPL1_2_D10.g1_A029 Roots plus add... 174 4e-068
gb|DR117522.1|DR117522 RTMG1_7_B03.g1_A029 Roots minus magn... 206 6e-067
gb|DR164099.1|DR164099 RTFE1_46_G03.g1_A029 Roots minus iro... 95 1e-066
gb|CO364127.1|CO364127 RTK1_13_G11.g1_A029 Roots minus pota... 96 2e-066
gb|CX649818.1|CX649818 COLD1_41_E02.g1_A029 Root cold Pinus... 127 3e-066
gb|CO365861.1|CO365861 RTK1_19_E01.g1_A029 Roots minus pota... 127 5e-066
gb|DR683429.1|DR683429 EST1073505 Normalized pine embryo li... 174 2e-065
gb|CO167718.1|CO167718 FLD1_70_E12.g1_A029 Root flooded Pin... 174 2e-065
gb|CF672738.1|CF672738 RTCNT1_73_D06.g1_A029 Root control P... 174 2e-065
gb|DR109614.1|DR109614 RTS1_3_B07.g1_A029 Roots minus sulfu... 121 2e-064
gb|DT634196.1|DT634196 EST1149127 Normalized pine embryo li... 160 4e-064
gb|DR682788.1|DR682788 EST1072863 Normalized pine embryo li... 159 4e-064
gb|AL751293.1|AL751293 AL751293 RS Pinus pinaster cDNA clon... 132 2e-063
gb|CO165064.1|CO165064 FLD1_52_D01.b1_A029 Root flooded Pin... 138 5e-063
gb|AL751213.1|AL751213 AL751213 RS Pinus pinaster cDNA clon... 132 8e-063
gb|DT633972.1|DT633972 EST1148903 Normalized pine embryo li... 160 1e-062
gb|BX678783.1|BX678783 BX678783 RS Pinus pinaster cDNA clon... 133 1e-062
gb|DR163369.1|DR163369 RTFE1_42_B11.g1_A029 Roots minus iro... 181 6e-062
gb|CF671723.1|CF671723 RTCNT1_58_H03.g1_A029 Root control P... 127 3e-061
gb|DR181212.1|DR181212 RTMNUT1_37_B09.g2_A029 Roots minus m... 127 3e-061
gb|DR744995.1|DR744995 RTCU1_26_G03.b1_A029 Roots plus adde... 127 3e-061
gb|CF665923.1|CF665923 RTCNT1_19_A06.g1_A029 Root control P... 127 3e-061
dbj|BD224556.1| Materials and methods for the modification ... 188 5e-061
gb|DR092596.1|DR092596 STRR1_2_A03.g1_A033 Stem Response Re... 151 7e-061
gb|DR682208.1|DR682208 EST1072283 Normalized pine embryo li... 159 1e-060
gb|CF663228.1|CF663228 RTCNT1_1_C11.g1_A029 Root control Pi... 152 2e-060
gb|CO161327.1|CO161327 FLD1_28_C11.b1_A029 Root flooded Pin... 148 4e-060
gb|DR017778.1|DR017778 STRS1_18_A05.g1_A034 Shoot tip pitch... 232 4e-060
gb|CF401192.1|CF401192 RTWW1_10_H07.g1_A015 Well-watered lo... 196 5e-060
dbj|BD224564.1| Materials and methods for the modification ... 93 7e-060
gb|CO163084.1|CO163084 FLD1_39_H03.b1_A029 Root flooded Pin... 209 1e-059
gb|CF666432.1|CF666432 RTCNT1_23_F04.b1_A029 Root control P... 143 2e-059
gb|DR683701.1|DR683701 EST1073777 Normalized pine embryo li... 208 3e-059
gb|DR687518.1|DR687518 EST1077600 Normalized pine embryo li... 160 3e-059
gb|DR096218.1|DR096218 STRR1_26_C02.g1_A033 Stem Response R... 141 5e-059
gb|BX678020.1|BX678020 BX678020 RN Pinus pinaster cDNA clon... 145 7e-059
gb|CF391811.1|CF391811 RTDR3_10_C10.b1_A022 Loblolly pine r... 205 9e-059
gb|DR177119.1|DR177119 RTMNUT1_3_F08.b1_A029 Roots minus mi... 95 1e-058
gb|CO167258.1|CO167258 FLD1_67_H01.g1_A029 Root flooded Pin... 164 2e-058
gb|AF291667.1|AF291667 Pinus sylvestris class III peroxidas... 94 7e-058
gb|CF402751.1|CF402751 RTWW1_22_C06.g1_A015 Well-watered lo... 180 8e-058
gb|DR057812.1|DR057812 RTNIT1_8_A09.b1_A029 Roots minus nit... 120 9e-058
gb|DR092597.1|DR092597 STRR1_2_A04.g1_A033 Stem Response Re... 141 9e-058
gb|BX681908.1|BX681908 BX681908 RS Pinus pinaster cDNA clon... 97 9e-058
gb|CX713178.1|CX713178 RTPQ1_7_B01.g1_A032 Roots treated wi... 207 1e-057
gb|CO164839.1|CO164839 FLD1_50_D08.g1_A029 Root flooded Pin... 115 1e-057
gb|DR088958.1|DR088958 RTAL1_5_E09.g1_A029 Roots plus added... 201 1e-057
gb|CO367149.1|CO367149 RTK1_32_B07.g1_A029 Roots minus pota... 207 3e-057
gb|CF475667.1|CF475667 RTWW2_11_A08.g1_A021 Well-watered lo... 186 4e-057
gb|CO365925.1|CO365925 RTK1_20_C04.b1_A029 Roots minus pota... 100 4e-057
gb|CO165979.1|CO165979 FLD1_58_B01.g1_A029 Root flooded Pin... 99 4e-057
gb|CO165441.1|CO165441 FLD1_54_C07.g1_A029 Root flooded Pin... 84 6e-057
gb|DR069645.1|DR069645 RTDK1_8_C03.g1_A029 Roots, dark Pinu... 207 1e-056
gb|BX678596.1|BX678596 BX678596 RS Pinus pinaster cDNA clon... 97 1e-056
gb|DR688296.1|DR688296 EST1078380 Normalized pine embryo li... 113 1e-056
gb|CR394388.1|CR394388 CR394388 RN Pinus pinaster cDNA clon... 143 3e-056
gb|DR020955.1|DR020955 STRS1_40_A01.g1_A034 Shoot tip pitch... 219 3e-056
gb|DR167700.1|DR167700 RTPHOS1_20_B06.g1_A029 Roots minus p... 100 4e-056
gb|DR023270.1|DR023270 STRS1_56_B11.g1_A034 Shoot tip pitch... 152 6e-056
gb|DR019663.1|DR019663 STRS1_31_C06.g1_A034 Shoot tip pitch... 218 6e-056
gb|DT634913.1|DT634913 EST1149844 Normalized pine embryo li... 113 7e-056
gb|CO163593.1|CO163593 FLD1_42_C09.g1_A029 Root flooded Pin... 208 9e-056
gb|DR011520.1|DR011520 HEAT1_6_E12.b1_A029 Root at 37 C for... 203 1e-055
gb|CX715978.1|CX715978 RTPQ1_39_D06.b1_A032 Roots treated w... 98 1e-055
gb|DR095060.1|DR095060 STRR1_18_C01.g1_A033 Stem Response R... 91 1e-055
gb|CO369651.1|CO369651 RTK1_48_C06.g1_A029 Roots minus pota... 207 2e-055
gb|DR093384.1|DR093384 STRR1_7_H12.g1_A033 Stem Response Re... 90 2e-055
gb|DR050470.1|DR050470 RTBOR1_23_E09.g1_A029 Roots plus add... 95 2e-055
gb|DR688340.1|DR688340 EST1078424 Normalized pine embryo li... 203 3e-055
gb|DR053196.1|DR053196 RTCA1_9_C11.g1_A029 Roots minus calc... 213 3e-055
gb|CO161773.1|CO161773 FLD1_31_C06.b1_A029 Root flooded Pin... 96 4e-055
gb|CX650543.1|CX650543 COLD1_46_A01.g1_A029 Root cold Pinus... 100 5e-055
gb|BX676904.1|BX676904 BX676904 RN Pinus pinaster cDNA clon... 143 6e-055
gb|CO161877.1|CO161877 FLD1_31_F05.g1_A029 Root flooded Pin... 172 7e-055
gb|CF385370.1|CF385370 RTDR1_3_C04.g1_A015 Loblolly pine ro... 155 8e-055
gb|DR096260.1|DR096260 STRR1_26_G02.g1_A033 Stem Response R... 201 9e-055
gb|CF666727.1|CF666727 RTCNT1_25_E03.g1_A029 Root control P... 200 1e-054
gb|CX646640.1|CX646640 COLD1_10_C08.g1_A029 Root cold Pinus... 115 1e-054
gb|DR090334.1|DR090334 RTAL1_14_H01.b1_A029 Roots plus adde... 100 1e-054
gb|CF400026.1|CF400026 RTWW1_2_G05.g1_A015 Well-watered lob... 154 1e-054
gb|CX651325.1|CX651325 COLD1_51_C12.g1_A029 Root cold Pinus... 207 2e-054
gb|DR386060.1|DR386060 RTHG1_12_E05.g1_A029 Roots plus adde... 207 2e-054
gb|CO161398.1|CO161398 FLD1_28_C04.g1_A029 Root flooded Pin... 207 2e-054
gb|CF388215.1|CF388215 RTDR2_1_A12.g1_A021 Loblolly pine ro... 100 3e-054
gb|CF479349.1|CF479349 RTWW3_23_H03.g1_A022 Well-watered lo... 207 6e-054
gb|DR098772.1|DR098772 STRR1_47_F07.g1_A033 Stem Response R... 211 1e-053
gb|CF390722.1|CF390722 RTDR2_17_B08.g1_A021 Loblolly pine r... 200 1e-053
gb|DR102850.1|DR102850 STRR1_84_B05.g1_A033 Stem Response R... 91 1e-053
gb|CO367969.1|CO367969 RTK1_37_G06.g1_A029 Roots minus pota... 207 1e-053
dbj|BD224561.1| Materials and methods for the modification ... 210 2e-053
gb|DR052270.1|DR052270 RTCA1_3_B12.g1_A029 Roots minus calc... 140 3e-053
gb|DR071838.1|DR071838 RTDK1_22_H10.b1_A029 Roots, dark Pin... 199 3e-053
gb|DT634565.1|DT634565 EST1149496 Normalized pine embryo li... 136 3e-053
gb|CX650746.1|CX650746 COLD1_47_G06.g1_A029 Root cold Pinus... 209 3e-053
gb|CF666458.1|CF666458 RTCNT1_23_A08.g1_A029 Root control P... 91 5e-053
gb|CO366046.1|CO366046 RTK1_20_G03.g1_A029 Roots minus pota... 207 1e-052
gb|CX648735.1|CX648735 COLD1_30_C06.g1_A029 Root cold Pinus... 207 1e-052
gb|CO161741.1|CO161741 FLD1_30_H02.g1_A029 Root flooded Pin... 126 1e-052
gb|DR021354.1|DR021354 STRS1_44_C09.b1_A034 Shoot tip pitch... 140 1e-052
gb|CF389796.1|CF389796 RTDR2_5_A11.g1_A021 Loblolly pine ro... 207 2e-052
gb|CF395450.1|CF395450 RTDS2_11_D11.g1_A021 Drought-stresse... 207 2e-052
gb|CF474576.1|CF474576 RTWW2_9_B10.g1_A021 Well-watered lob... 207 2e-052
gb|CF479199.1|CF479199 RTWW3_24_F05.g1_A022 Well-watered lo... 207 2e-052
gb|DR091318.1|DR091318 RTAL1_20_F12.g1_A029 Roots plus adde... 207 2e-052
gb|DR179945.1|DR179945 RTMNUT1_25_B11.g1_A029 Roots minus m... 207 2e-052
gb|CF387203.1|CF387203 RTDR1_11_E10.g1_A015 Loblolly pine r... 80 2e-052
dbj|BD224554.1| Materials and methods for the modification ... 206 2e-052
gb|DR016129.1|DR016129 STRS1_7_H01.g1_A034 Shoot tip pitch ... 154 2e-052
gb|CO161405.1|CO161405 FLD1_28_C11.g1_A029 Root flooded Pin... 143 3e-052
gb|CF385386.1|CF385386 RTDR1_3_E05.g1_A015 Loblolly pine ro... 206 3e-052
gb|CF401583.1|CF401583 RTWW1_13_A11.g1_A015 Well-watered lo... 206 3e-052
gb|CF402030.1|CF402030 RTWW1_16_F01.g1_A015 Well-watered lo... 206 3e-052
gb|CO367295.1|CO367295 RTK1_33_A07.g1_A029 Roots minus pota... 206 3e-052
gb|CX650291.1|CX650291 COLD1_44_E09.g1_A029 Root cold Pinus... 206 3e-052
gb|DR102535.1|DR102535 STRR1_81_G06.g1_A033 Stem Response R... 206 3e-052
gb|DR070887.1|DR070887 RTDK1_16_E10.b1_A029 Roots, dark Pin... 130 3e-052
gb|BX678243.1|BX678243 BX678243 RN Pinus pinaster cDNA clon... 205 4e-052
gb|CO361618.1|CO361618 NDL2_6_A03.b1_A029 Needles control 2... 204 5e-052
gb|CF386345.1|CF386345 RTDR1_13_H08.g1_A015 Loblolly pine r... 201 5e-052
gb|DR685604.1|DR685604 EST1075681 Normalized pine embryo li... 205 6e-052
gb|DR090469.1|DR090469 RTAL1_15_F06.b1_A029 Roots plus adde... 138 7e-052
gb|CV034435.1|CV034435 RTNACL1_40_H06.g1_A029 Roots plus ad... 100 1e-051
gb|CF385091.1|CF385091 RTDR1_1_H08.g1_A015 Loblolly pine ro... 201 2e-051
gb|CO365673.1|CO365673 RTK1_18_B06.g1_A029 Roots minus pota... 128 2e-051
gb|DR051349.1|DR051349 RTBOR1_29_A10.g1_A029 Roots plus add... 203 2e-051
gb|DR110447.1|DR110447 RTS1_11_A03.b1_A029 Roots minus sulf... 95 2e-051
gb|CF471915.1|CF471915 RTDS1_7_E08.g1_A015 Drought-stressed... 95 2e-051
gb|DR179643.1|DR179643 RTMNUT1_23_A02.g2_A029 Roots minus m... 95 2e-051
gb|DR742406.1|DR742406 RTCU1_3_G03.g2_A029 Roots plus added... 203 3e-051
gb|DT634752.1|DT634752 EST1149683 Normalized pine embryo li... 203 3e-051
gb|CO367504.1|CO367504 RTK1_34_E10.g1_A029 Roots minus pota... 117 4e-051
gb|CO364042.1|CO364042 RTK1_13_G11.b1_A029 Roots minus pota... 96 4e-051
gb|DT633320.1|DT633320 EST1148251 Normalized pine embryo li... 202 4e-051
gb|CV033874.1|CV033874 RTNACL1_37_D06.b1_A029 Roots plus ad... 138 5e-051
gb|CO167565.1|CO167565 FLD1_69_E12.g1_A029 Root flooded Pin... 79 5e-051
gb|DR099040.1|DR099040 STRR1_52_C09.b1_A033 Stem Response R... 202 5e-051
gb|CF476619.1|CF476619 RTWW3_2_E11.g1_A022 Well-watered lob... 177 6e-051
gb|DR025204.1|DR025204 STRS1_70_F04.b1_A034 Shoot tip pitch... 132 7e-051
gb|DR057942.1|DR057942 RTNIT1_8_F01.g1_A029 Roots minus nit... 122 8e-051
gb|CF475232.1|CF475232 RTWW2_14_B02.g1_A021 Well-watered lo... 201 8e-051
gb|CO164700.1|CO164700 FLD1_49_E11.g1_A029 Root flooded Pin... 84 8e-051
gb|DR109985.1|DR109985 RTS1_1_D12.b1_A029 Roots minus sulfu... 95 1e-050
gb|CF387078.1|CF387078 RTDR1_10_H09.g1_A015 Loblolly pine r... 201 1e-050
gb|CF391571.1|CF391571 RTDR3_9_C02.g1_A022 Loblolly pine ro... 201 1e-050
gb|CF400173.1|CF400173 RTWW1_3_F07.g1_A015 Well-watered lob... 201 1e-050
gb|DR742871.1|DR742871 RTCU1_7_C01.g2_A029 Roots plus added... 201 1e-050
gb|CF663696.1|CF663696 RTCNT1_4_C09.g1_A029 Root control Pi... 200 1e-050
gb|CO365129.1|CO365129 RTK1_23_G04.g1_A029 Roots minus pota... 126 2e-050
gb|CO165622.1|CO165622 FLD1_55_G07.g1_A029 Root flooded Pin... 87 2e-050
gb|CF477229.1|CF477229 RTWW3_6_G02.g1_A022 Well-watered lob... 200 2e-050
gb|CX646289.1|CX646289 COLD1_8_A11.g1_A029 Root cold Pinus ... 200 2e-050
gb|DR025273.1|DR025273 STRS1_70_D08.g1_A034 Shoot tip pitch... 200 2e-050
gb|CO198153.1|CO198153 GEO1_11_D08.g1_A029 Root gravitropis... 130 2e-050
gb|DR089283.1|DR089283 RTAL1_7_E08.g1_A029 Roots plus added... 199 3e-050
gb|DR177199.1|DR177199 RTMNUT1_3_F07.g1_A029 Roots minus mi... 199 3e-050
gb|DR690617.1|DR690617 EST1080703 Normalized pine embryo li... 199 3e-050
gb|CF666909.1|CF666909 RTCNT1_27_A03.b1_A029 Root control P... 197 3e-050
gb|CF387396.1|CF387396 RTDR1_12_G07.g1_A015 Loblolly pine r... 199 4e-050
dbj|BD224558.1| Materials and methods for the modification ... 199 4e-050
gb|DR052042.1|DR052042 RTCA1_2_C02.b1_A029 Roots minus calc... 122 5e-050
gb|DR014964.1|DR014964 HEAT1_52_E04.g1_A029 Root at 37 C fo... 122 5e-050
gb|CO369276.1|CO369276 RTK1_46_C07.b1_A029 Roots minus pota... 122 5e-050
gb|CO365485.1|CO365485 RTK1_17_G11.b1_A029 Roots minus pota... 122 5e-050
gb|DR163917.1|DR163917 RTFE1_45_E11.g1_A029 Roots minus iro... 122 5e-050
gb|CF673074.1|CF673074 RTCNT1_75_H04.g1_A029 Root control P... 122 5e-050
gb|DR080848.1|DR080848 RTFEPL1_25_D11.g1_A029 Roots plus ad... 122 5e-050
gb|CF390344.1|CF390344 RTDR2_18_B10.g1_A021 Loblolly pine r... 122 5e-050
gb|CO369092.1|CO369092 RTK1_44_H09.g1_A029 Roots minus pota... 122 5e-050
gb|DR013997.1|DR013997 HEAT1_22_F12.g1_A029 Root at 37 C fo... 122 5e-050
gb|CF670206.1|CF670206 RTCNT1_48_F03.g1_A029 Root control P... 122 5e-050
gb|CF668988.1|CF668988 RTCNT1_39_H03.g1_A029 Root control P... 122 5e-050
gb|CF668285.1|CF668285 RTCNT1_35_C05.g1_A029 Root control P... 122 5e-050
gb|DR060993.1|DR060993 RTNIT1_31_H08.b1_A029 Roots minus ni... 122 5e-050
gb|DR050282.1|DR050282 RTBOR1_22_A07.g1_A029 Roots plus add... 122 5e-050
gb|DR017780.1|DR017780 STRS1_18_A08.g1_A034 Shoot tip pitch... 196 5e-050
gb|CO370001.1|CO370001 RTK1_55_H10.g1_A029 Roots minus pota... 100 7e-050
gb|DR053478.1|DR053478 RTCA1_11_A02.g1_A029 Roots minus cal... 198 7e-050
gb|DR180626.1|DR180626 RTMNUT1_33_G02.g1_A029 Roots minus m... 198 7e-050
gb|DR743557.1|DR743557 RTCU1_16_E06.g1_A029 Roots plus adde... 198 7e-050
gb|DR683943.1|DR683943 EST1074019 Normalized pine embryo li... 186 7e-050
gb|CF477732.1|CF477732 RTWW3_9_H04.g1_A022 Well-watered lob... 182 9e-050
gb|CX650346.1|CX650346 COLD1_45_C05.b1_A029 Root cold Pinus... 126 9e-050
gb|CF391763.1|CF391763 RTDR3_11_E05.g1_A022 Loblolly pine r... 198 1e-049
gb|DR096092.1|DR096092 STRR1_25_E03.g1_A033 Stem Response R... 84 2e-049
gb|DR100118.1|DR100118 STRR1_61_G12.g1_A033 Stem Response R... 167 2e-049
gb|BI202915.1|BI202915 NXPV_092_D11_F NXPV (Nsf Xylem Plani... 197 2e-049
gb|CF474883.1|CF474883 RTWW2_8_F04.g1_A021 Well-watered lob... 197 2e-049
gb|CO159581.1|CO159581 FLD1_14_B02.g1_A029 Root flooded Pin... 197 2e-049
gb|CO167878.1|CO167878 FLD1_71_G07.g1_A029 Root flooded Pin... 197 2e-049
gb|DR117444.1|DR117444 RTMG1_7_B03.b1_A029 Roots minus magn... 133 3e-049
gb|DR110885.1|DR110885 RTS1_13_F04.g1_A029 Roots minus sulf... 95 3e-049
gb|CO159324.1|CO159324 FLD1_12_H06.g1_A029 Root flooded Pin... 84 4e-049
gb|CO157877.1|CO157877 FLD1_2_F04.g1_A029 Root flooded Pinu... 195 5e-049
gb|CO197729.1|CO197729 GEO1_8_D08.g1_A029 Root gravitropism... 100 6e-049
gb|CF402571.1|CF402571 RTWW1_21_C11.g1_A015 Well-watered lo... 87 7e-049
gb|CF385187.1|CF385187 RTDR1_2_C03.g1_A015 Loblolly pine ro... 87 7e-049
gb|DR097469.1|DR097469 STRR1_34_G07.g3_A033 Stem Response R... 114 1e-048
gb|DR070821.1|DR070821 RTDK1_15_G06.g1_A029 Roots, dark Pin... 122 1e-048
gb|CO366567.1|CO366567 RTK1_28_D08.g1_A029 Roots minus pota... 194 1e-048
gb|DR052199.1|DR052199 RTCA1_3_B12.b1_A029 Roots minus calc... 124 1e-048
gb|CO163625.1|CO163625 FLD1_42_F11.g1_A029 Root flooded Pin... 192 2e-048
gb|DR162792.1|DR162792 RTFE1_20_C02.g1_A029 Roots minus iro... 178 2e-048
gb|CO197967.1|CO197967 GEO1_10_H07.b1_A029 Root gravitropis... 133 2e-048
gb|BX679095.1|BX679095 BX679095 RS Pinus pinaster cDNA clon... 193 2e-048
gb|DT637471.1|DT637471 EST1152402 Normalized pine embryo li... 80 3e-048
gb|DR015946.1|DR015946 STRS1_6_E05.g1_A034 Shoot tip pitch ... 123 3e-048
gb|DR071585.1|DR071585 RTDK1_20_G11.g1_A029 Roots, dark Pin... 193 3e-048
gb|CV145607.1|CV145607 EST856816 Sequencing ESTs from loblo... 126 4e-048
gb|DT624624.1|DT624624 EST1158959 Sequencing ESTs from lobl... 126 4e-048
gb|DT624683.1|DT624683 EST1159018 Sequencing ESTs from lobl... 126 4e-048
gb|CV144839.1|CV144839 EST856048 Sequencing ESTs from loblo... 126 4e-048
gb|DR110599.1|DR110599 RTS1_11_G03.g1_A029 Roots minus sulf... 110 4e-048
gb|DR056948.1|DR056948 RTNIT1_1_D03.g1_A029 Roots minus nit... 183 4e-048
gb|DR386541.1|DR386541 RTHG1_15_H06.g1_A029 Roots plus adde... 192 4e-048
gb|CO200887.1|CO200887 RTCNT2_2_F01.b1_A029 Root control 2 ... 124 4e-048
gb|DR094440.1|DR094440 STRR1_14_D01.g1_A033 Stem Response R... 140 5e-048
gb|CO368475.1|CO368475 RTK1_40_G10.g1_A029 Roots minus pota... 185 6e-048
gb|DR182041.1|DR182041 RTMNUT1_42_C02.g1_A029 Roots minus m... 185 6e-048
gb|CF672147.1|CF672147 RTCNT1_61_E03.g1_A029 Root control P... 134 7e-048
gb|DR025291.1|DR025291 STRS1_70_F04.g1_A034 Shoot tip pitch... 122 7e-048
gb|DR050063.1|DR050063 RTBOR1_21_C03.b1_A029 Roots plus add... 93 7e-048
gb|CX653299.1|CX653299 COLD1_64_E06.g1_A029 Root cold Pinus... 98 7e-048
gb|CF666632.1|CF666632 RTCNT1_24_G05.g1_A029 Root control P... 113 1e-047
gb|DR094620.1|DR094620 STRR1_15_E08.g1_A033 Stem Response R... 186 1e-047
gb|CF387576.1|CF387576 RTDR1_20_A04.g1_A015 Loblolly pine r... 91 1e-047
gb|CV032135.1|CV032135 RTNACL1_6_D04.b1_A029 Roots plus add... 141 1e-047
gb|DR100195.1|DR100195 STRR1_62_H04.b1_A033 Stem Response R... 133 1e-047
gb|CV033076.1|CV033076 RTNACL1_20_D02.b1_A029 Roots plus ad... 121 2e-047
gb|CF665306.1|CF665306 RTCNT1_15_E09.b1_A029 Root control P... 126 2e-047
gb|CF390688.1|CF390688 RTDR2_20_D12.g1_A021 Loblolly pine r... 126 2e-047
gb|DR109392.1|DR109392 RTS1_1_D12.g1_A029 Roots minus sulfu... 95 2e-047
gb|CF402767.1|CF402767 RTWW1_22_E05.g1_A015 Well-watered lo... 74 2e-047
gb|DR057181.1|DR057181 RTNIT1_4_D04.b1_A029 Roots minus nit... 94 3e-047
gb|CF477895.1|CF477895 RTWW3_13_H05.g1_A022 Well-watered lo... 189 4e-047
gb|DR070964.1|DR070964 RTDK1_16_E10.g1_A029 Roots, dark Pin... 130 7e-047
gb|DR094759.1|DR094759 STRR1_16_C10.g1_A033 Stem Response R... 188 8e-047
gb|BQ701814.1|BQ701814 NXSI_120_H03_F NXSI (Nsf Xylem Side ... 90 9e-047
gb|DR017052.1|DR017052 STRS1_13_F06.g1_A034 Shoot tip pitch... 74 9e-047
gb|BX665987.1|BX665987 BX665987 RN Pinus pinaster cDNA clon... 188 1e-046
gb|DR024895.1|DR024895 STRS1_68_F04.b1_A034 Shoot tip pitch... 188 1e-046
gb|DR098451.1|DR098451 STRR1_45_C10.g1_A033 Stem Response R... 188 1e-046
gb|DR110107.1|DR110107 RTS1_8_C10.g1_A029 Roots minus sulfu... 188 1e-046
gb|CO165128.1|CO165128 FLD1_52_C03.g1_A029 Root flooded Pin... 91 1e-046
gb|CX715825.1|CX715825 RTPQ1_36_F03.g1_A032 Roots treated w... 109 1e-046
gb|CO197668.1|CO197668 GEO1_8_D08.b1_A029 Root gravitropism... 79 1e-046
gb|CF389421.1|CF389421 RTDR2_7_F05.g1_A021 Loblolly pine ro... 122 2e-046
gb|DR094127.1|DR094127 STRR1_12_D05.g1_A033 Stem Response R... 90 2e-046
gb|CO160800.1|CO160800 FLD1_24_B07.g1_A029 Root flooded Pin... 143 3e-046
gb|CF476953.1|CF476953 RTWW3_4_G10.g1_A022 Well-watered lob... 167 3e-046
gb|BX667556.1|BX667556 BX667556 RN Pinus pinaster cDNA clon... 186 3e-046
gb|DT631954.1|DT631954 EST1146885 Normalized pine embryo li... 186 3e-046
gb|CO369936.1|CO369936 RTK1_55_H10.b1_A029 Roots minus pota... 79 4e-046
gb|CO366003.1|CO366003 RTK1_20_C04.g1_A029 Roots minus pota... 79 4e-046
emb|AJ251254.1|PPI251254 Pinus pinaster partial mRNA for pe... 105 4e-046
gb|DR179333.1|DR179333 RTMNUT1_21_A03.g2_A029 Roots minus m... 185 5e-046
gb|DR097614.1|DR097614 STRR1_35_H07.g4_A033 Stem Response R... 150 6e-046
gb|DR016210.1|DR016210 STRS1_8_C05.g1_A034 Shoot tip pitch ... 89 6e-046
gb|DR022504.1|DR022504 STRS1_51_C02.g1_A034 Shoot tip pitch... 77 6e-046
gb|DR163290.1|DR163290 RTFE1_42_B11.b1_A029 Roots minus iro... 127 7e-046
dbj|BD224552.1| Materials and methods for the modification ... 185 7e-046
gb|CF669107.1|CF669107 RTCNT1_40_E05.g1_A029 Root control P... 94 7e-046
gb|DR686286.1|DR686286 EST1076364 Normalized pine embryo li... 184 8e-046
gb|DR021541.1|DR021541 STRS1_45_H03.b1_A034 Shoot tip pitch... 102 8e-046
gb|DR079272.1|DR079272 RTFEPL1_10_E10.b1_A029 Roots plus ad... 78 1e-045
gb|DR018090.1|DR018090 STRS1_20_A04.g1_A034 Shoot tip pitch... 91 1e-045
gb|DR070948.1|DR070948 RTDK1_16_D02.g1_A029 Roots, dark Pin... 94 2e-045
gb|CR393511.1|CR393511 CR393511 RN Pinus pinaster cDNA clon... 178 2e-045
gb|DR052296.1|DR052296 RTCA1_3_E07.g1_A029 Roots minus calc... 90 2e-045
gb|DR386769.1|DR386769 RTHG1_17_G09.b1_A029 Roots plus adde... 90 2e-045
gb|CO158751.1|CO158751 FLD1_9_B11.b1_A029 Root flooded Pinu... 90 2e-045
gb|DR386854.1|DR386854 RTHG1_17_G09.g1_A029 Roots plus adde... 90 2e-045
gb|CF399623.1|CF399623 RTDS3_25_E09.b1_A022 Drought-stresse... 90 3e-045
gb|DR016727.1|DR016727 STRS1_11_G02.g1_A034 Shoot tip pitch... 94 3e-045
gb|CO161841.1|CO161841 FLD1_31_B09.g1_A029 Root flooded Pin... 94 3e-045
gb|DR052158.1|DR052158 RTCA1_2_F12.g1_A029 Roots minus calc... 94 3e-045
gb|CF665386.1|CF665386 RTCNT1_15_E09.g1_A029 Root control P... 147 4e-045
gb|DR012568.1|DR012568 HEAT1_13_E03.g1_A029 Root at 37 C fo... 90 7e-045
gb|DR097295.1|DR097295 STRR1_33_F08.g3_A033 Stem Response R... 93 8e-045
gb|DR061033.1|DR061033 RTNIT1_31_D08.g1_A029 Roots minus ni... 94 8e-045
gb|DR089205.1|DR089205 RTAL1_7_E08.b1_A029 Roots plus added... 114 8e-045
gb|DR058888.1|DR058888 RTNIT1_14_B05.g1_A029 Roots minus ni... 181 9e-045
gb|DR387241.1|DR387241 RTHG1_20_A03.g1_A029 Roots plus adde... 91 1e-044
gb|DR012489.1|DR012489 HEAT1_13_E03.b1_A029 Root at 37 C fo... 94 1e-044
gb|CF394286.1|CF394286 RTDS2_4_D09.g1_A021 Drought-stressed... 181 1e-044
gb|CO166402.1|CO166402 FLD1_61_E10.g1_A029 Root flooded Pin... 98 1e-044
gb|CX646672.1|CX646672 COLD1_10_G02.g1_A029 Root cold Pinus... 89 2e-044
gb|CX646593.1|CX646593 COLD1_10_G02.b1_A029 Root cold Pinus... 89 2e-044
gb|CO164905.1|CO164905 FLD1_51_C02.b1_A029 Root flooded Pin... 89 2e-044
gb|CF400872.1|CF400872 RTWW1_8_H02.g1_A015 Well-watered lob... 89 2e-044
gb|CO164640.1|CO164640 FLD1_49_G12.b1_A029 Root flooded Pin... 126 2e-044
gb|DR094945.1|DR094945 STRR1_17_F11.g1_A033 Stem Response R... 92 2e-044
gb|BX676813.1|BX676813 BX676813 RN Pinus pinaster cDNA clon... 180 2e-044
gb|DR054945.1|DR054945 RTCA1_20_C08.g1_A029 Roots minus cal... 90 3e-044
gb|DR098785.1|DR098785 STRR1_47_G08.g1_A033 Stem Response R... 90 3e-044
gb|CX652846.1|CX652846 COLD1_61_G11.g1_A029 Root cold Pinus... 90 4e-044
gb|CO364812.1|CO364812 RTK1_22_A03.b1_A029 Roots minus pota... 89 4e-044
gb|CX652898.1|CX652898 COLD1_62_E03.b1_A029 Root cold Pinus... 93 4e-044
gb|DR742794.1|DR742794 RTCU1_7_C01.b2_A029 Roots plus added... 111 5e-044
gb|CO200480.1|CO200480 GEO2_7_E11.g1_A032 Root gravitropism... 95 5e-044
gb|DR385763.1|DR385763 RTHG1_10_E09.g1_A029 Roots plus adde... 92 5e-044
gb|CO166058.1|CO166058 FLD1_59_B07.b1_A029 Root flooded Pin... 72 5e-044
gb|DR099155.1|DR099155 STRR1_53_B10.g1_A033 Stem Response R... 126 5e-044
gb|DR069696.1|DR069696 RTDK1_8_H07.g1_A029 Roots, dark Pinu... 94 5e-044
gb|DR072451.1|DR072451 RTDK1_26_H06.b1_A029 Roots, dark Pin... 122 5e-044
gb|CF387636.1|CF387636 RTDR1_19_C02.b1_A015 Loblolly pine r... 178 8e-044
gb|CO167806.1|CO167806 FLD1_71_G07.b1_A029 Root flooded Pin... 129 1e-043
gb|CR393291.1|CR393291 CR393291 RN Pinus pinaster cDNA clon... 177 1e-043
gb|DR682787.1|DR682787 EST1072862 Normalized pine embryo li... 110 1e-043
gb|CF390300.1|CF390300 RTDR2_18_C09.g1_A021 Loblolly pine r... 95 1e-043
gb|CF663893.1|CF663893 RTCNT1_5_G12.g1_A029 Root control Pi... 177 2e-043
gb|CF386285.1|CF386285 RTDR1_13_E11.g1_A015 Loblolly pine r... 126 2e-043
gb|CR393173.1|CR393173 CR393173 RN Pinus pinaster cDNA clon... 126 2e-043
gb|DR163463.1|DR163463 RTFE1_43_C04.b1_A029 Roots minus iro... 96 2e-043
gb|CO364109.1|CO364109 RTK1_13_F05.g1_A029 Roots minus pota... 91 2e-043
gb|DR101820.1|DR101820 STRR1_76_C09.b1_A033 Stem Response R... 94 3e-043
gb|DR012184.1|DR012184 HEAT1_10_F10.g1_A029 Root at 37 C fo... 176 3e-043
gb|DR096212.1|DR096212 STRR1_26_B07.g1_A033 Stem Response R... 125 4e-043
gb|DR094872.1|DR094872 STRR1_17_G08.b1_A033 Stem Response R... 108 5e-043
gb|DR079726.1|DR079726 RTFEPL1_17_D11.b1_A029 Roots plus ad... 80 5e-043
gb|DR079676.1|DR079676 RTFEPL1_12_G05.g1_A029 Roots plus ad... 92 5e-043
gb|DR180204.1|DR180204 RTMNUT1_27_D03.b1_A029 Roots minus m... 94 6e-043
gb|DR054864.1|DR054864 RTCA1_20_B09.b1_A029 Roots minus cal... 89 6e-043
gb|CO162320.1|CO162320 FLD1_34_C07.g1_A029 Root flooded Pin... 93 6e-043
gb|CO162150.1|CO162150 FLD1_33_B03.g1_A029 Root flooded Pin... 87 8e-043
gb|DT634886.1|DT634886 EST1149817 Normalized pine embryo li... 82 8e-043
gb|DR688664.1|DR688664 EST1078749 Normalized pine embryo li... 82 8e-043
gb|CF470625.1|CF470625 RTDS1_13_E05.g1_A015 Drought-stresse... 93 8e-043
gb|CO173071.1|CO173071 NDL1_33_G05.g1_A029 Needles control ... 135 8e-043
gb|CX651389.1|CX651389 COLD1_52_C01.b1_A029 Root cold Pinus... 91 9e-043
gb|DT630985.1|DT630985 EST1145916 Normalized pine embryo li... 82 1e-042
gb|DR682260.1|DR682260 EST1072335 Normalized pine embryo li... 82 1e-042
gb|AW981992.1|AW981992 PC22E09 Pine TriplEx pollen cone lib... 174 1e-042
gb|DR161649.1|DR161649 RTFE1_13_C09.b1_A029 Roots minus iro... 84 1e-042
gb|DR080434.1|DR080434 RTFEPL1_22_D07.g1_A029 Roots plus ad... 100 1e-042
gb|CO363585.1|CO363585 RTK1_10_D05.g1_A029 Roots minus pota... 115 2e-042
gb|CO167173.1|CO167173 FLD1_67_H01.b1_A029 Root flooded Pin... 108 2e-042
gb|CO159022.1|CO159022 FLD1_10_G02.g1_A029 Root flooded Pin... 173 2e-042
gb|CO366211.1|CO366211 RTK1_26_B11.g1_A029 Roots minus pota... 81 2e-042
gb|DR050073.1|DR050073 RTBOR1_21_D02.b1_A029 Roots plus add... 84 3e-042
gb|DR179563.1|DR179563 RTMNUT1_23_A02.b2_A029 Roots minus m... 87 3e-042
dbj|BD224563.1| Materials and methods for the modification ... 113 3e-042
gb|CO369083.1|CO369083 RTK1_44_G07.g1_A029 Roots minus pota... 122 4e-042
gb|DR011877.1|DR011877 HEAT1_8_B03.g1_A029 Root at 37 C for... 122 4e-042
gb|DR015598.1|DR015598 STRS1_4_B03.g1_A034 Shoot tip pitch ... 172 4e-042
gb|CF390326.1|CF390326 RTDR2_18_B09.g1_A021 Loblolly pine r... 66 4e-042
gb|DR016156.1|DR016156 STRS1_8_C05.b1_A034 Shoot tip pitch ... 89 4e-042
gb|DR017843.1|DR017843 STRS1_18_G08.g1_A034 Shoot tip pitch... 91 4e-042
gb|BX680553.1|BX680553 BX680553 RS Pinus pinaster cDNA clon... 166 4e-042
gb|DT635728.1|DT635728 EST1150659 Normalized pine embryo li... 78 5e-042
gb|CF386338.1|CF386338 RTDR1_13_E09.g1_A015 Loblolly pine r... 84 5e-042
gb|DR025482.1|DR025482 STRS1_71_H02.g1_A034 Shoot tip pitch... 78 5e-042
gb|BX679939.1|BX679939 BX679939 RS Pinus pinaster cDNA clon... 90 5e-042
gb|DR016829.1|DR016829 STRS1_12_A06.g1_A034 Shoot tip pitch... 122 5e-042
gb|DT624617.1|DT624617 EST1158952 Sequencing ESTs from lobl... 113 6e-042
gb|BX680067.1|BX680067 BX680067 RS Pinus pinaster cDNA clon... 93 6e-042
gb|CF474383.1|CF474383 RTWW2_20_F10.g1_A021 Well-watered lo... 90 7e-042
gb|CO164764.1|CO164764 FLD1_50_D08.b1_A029 Root flooded Pin... 89 7e-042
gb|CV036319.1|CV036319 RTNACL1_58_H07.b1_A029 Roots plus ad... 122 7e-042
gb|CO170313.1|CO170313 NDL1_13_E07.b1_A029 Needles control ... 89 7e-042
gb|CO165883.1|CO165883 FLD1_57_F09.g1_A029 Root flooded Pin... 85 7e-042
gb|CO161767.1|CO161767 FLD1_31_B09.b1_A029 Root flooded Pin... 72 9e-042
gb|CV031899.1|CV031899 RTNACL1_4_A11.g1_A029 Roots plus add... 171 1e-041
gb|DT631708.1|DT631708 EST1146639 Normalized pine embryo li... 171 1e-041
dbj|BD224362.1| Materials and methods for the modification ... 94 1e-041
dbj|BD273000.1| Materials and methods for the modification ... 94 1e-041
gb|DR094825.1|DR094825 STRR1_17_B03.b1_A033 Stem Response R... 116 1e-041
gb|DR096972.1|DR096972 STRR1_31_D02.g1_A033 Stem Response R... 78 1e-041
gb|CF385526.1|CF385526 RTDR1_4_H07.g1_A015 Loblolly pine ro... 78 1e-041
gb|CO369379.1|CO369379 RTK1_46_E11.g1_A029 Roots minus pota... 122 1e-041
gb|CR392474.1|CR392474 CR392474 RN Pinus pinaster cDNA clon... 97 1e-041
gb|DR094953.1|DR094953 STRR1_17_G08.g1_A033 Stem Response R... 103 1e-041
gb|CF385663.1|CF385663 RTDR1_5_A11.g1_A015 Loblolly pine ro... 127 2e-041
gb|CF667641.1|CF667641 RTCNT1_31_D05.g1_A029 Root control P... 119 2e-041
gb|DR019353.1|DR019353 STRS1_29_B01.g1_A034 Shoot tip pitch... 84 2e-041
gb|DR055365.1|DR055365 RTCA1_23_F04.b1_A029 Roots minus cal... 126 2e-041
gb|CF477599.1|CF477599 RTWW3_8_F03.g1_A022 Well-watered lob... 126 2e-041
gb|CF385702.1|CF385702 RTDR1_5_C11.g1_A015 Loblolly pine ro... 78 3e-041
gb|CO167149.1|CO167149 FLD1_67_D11.b1_A029 Root flooded Pin... 89 5e-041
gb|DR164350.1|DR164350 RTFE1_48_H08.b1_A029 Roots minus iro... 85 6e-041
gb|DR102130.1|DR102130 STRR1_78_D11.g1_A033 Stem Response R... 91 7e-041
gb|DR050153.1|DR050153 RTBOR1_21_D02.g1_A029 Roots plus add... 90 7e-041
gb|DR047581.1|DR047581 RTBOR1_2_C02.b1_A029 Roots plus adde... 97 1e-040
gb|DN448978.1|DN448978 EST944777 Sequencing ESTs from loblo... 113 1e-040
gb|BX677579.1|BX677579 BX677579 RN Pinus pinaster cDNA clon... 167 1e-040
gb|BX678115.1|BX678115 BX678115 RN Pinus pinaster cDNA clon... 87 1e-040
gb|CX647831.1|CX647831 COLD1_20_D03.g1_A029 Root cold Pinus... 100 1e-040
gb|CF394136.1|CF394136 RTDS2_3_G10.g1_A021 Drought-stressed... 110 2e-040
gb|CF401639.1|CF401639 RTWW1_14_B03.b1_A015 Well-watered lo... 87 2e-040
gb|CF671224.1|CF671224 RTCNT1_55_D05.g1_A029 Root control P... 87 2e-040
gb|DN449410.1|DN449410 EST945209 Sequencing ESTs from loblo... 113 2e-040
gb|DR690397.1|DR690397 EST1080483 Normalized pine embryo li... 122 3e-040
gb|DR687396.1|DR687396 EST1077478 Normalized pine embryo li... 84 3e-040
gb|DR069429.1|DR069429 RTDK1_7_F01.b1_A029 Roots, dark Pinu... 106 3e-040
gb|CF387597.1|CF387597 RTDR1_20_H12.g1_A015 Loblolly pine r... 166 3e-040
gb|DR057121.1|DR057121 RTNIT1_2_E11.g1_A029 Roots minus nit... 101 4e-040
gb|CO369965.1|CO369965 RTK1_55_C11.g1_A029 Roots minus pota... 90 4e-040
gb|CO365109.1|CO365109 RTK1_23_E07.g1_A029 Roots minus pota... 83 5e-040
gb|DR178242.1|DR178242 RTMNUT1_10_G05.b1_A029 Roots minus m... 88 5e-040
gb|DR069584.1|DR069584 RTDK1_8_D05.b1_A029 Roots, dark Pinu... 72 6e-040
gb|DR020775.1|DR020775 STRS1_39_E10.b1_A034 Shoot tip pitch... 72 6e-040
gb|CO161433.1|CO161433 FLD1_28_F07.g1_A029 Root flooded Pin... 72 6e-040
gb|CO159641.1|CO159641 FLD1_14_G12.g1_A029 Root flooded Pin... 72 6e-040
gb|DR388706.1|DR388706 RTHG1_30_B04.b1_A029 Roots plus adde... 72 6e-040
gb|CX652768.1|CX652768 COLD1_61_G11.b1_A029 Root cold Pinus... 90 6e-040
gb|DR060481.1|DR060481 RTNIT1_28_C11.b1_A029 Roots minus ni... 94 6e-040
gb|CF479061.1|CF479061 RTWW3_21_H03.g1_A022 Well-watered lo... 72 6e-040
gb|CF386681.1|CF386681 RTDR1_16_G03.b1_A015 Loblolly pine r... 165 6e-040
gb|DR102256.1|DR102256 STRR1_79_E02.g1_A033 Stem Response R... 165 6e-040
gb|DR177200.1|DR177200 RTMNUT1_3_F08.g1_A029 Roots minus mi... 68 6e-040
gb|DR743106.1|DR743106 RTCU1_13_C11.g1_A029 Roots plus adde... 88 6e-040
gb|DR052119.1|DR052119 RTCA1_2_C02.g1_A029 Roots minus calc... 114 7e-040
gb|CO201226.1|CO201226 RTCNT2_4_A02.g1_A029 Root control 2 ... 77 7e-040
gb|CO369569.1|CO369569 RTK1_48_C06.b1_A029 Roots minus pota... 105 8e-040
gb|DR054873.1|DR054873 RTCA1_20_C08.b1_A029 Roots minus cal... 72 8e-040
gb|DR099394.1|DR099394 STRR1_55_F12.b1_A033 Stem Response R... 98 1e-039
gb|DR099384.1|DR099384 STRR1_55_E12.b1_A033 Stem Response R... 98 1e-039
gb|DR386249.1|DR386249 RTHG1_13_H06.g1_A029 Roots plus adde... 81 1e-039
gb|DR112253.1|DR112253 RTS1_26_H10.g1_A029 Roots minus sulf... 100 1e-039
gb|CR394179.1|CR394179 CR394179 RN Pinus pinaster cDNA clon... 164 2e-039
gb|DR017704.1|DR017704 STRS1_18_A05.b1_A034 Shoot tip pitch... 120 2e-039
gb|DR098377.1|DR098377 STRR1_45_C10.b1_A033 Stem Response R... 111 2e-039
gb|DR015519.1|DR015519 STRS1_4_B03.b1_A034 Shoot tip pitch ... 109 2e-039
gb|DR100064.1|DR100064 STRR1_61_G12.b1_A033 Stem Response R... 91 2e-039
gb|CO364892.1|CO364892 RTK1_22_A03.g1_A029 Roots minus pota... 72 2e-039
gb|DR166827.1|DR166827 RTPHOS1_14_F03.g1_A029 Roots minus p... 72 2e-039
gb|DR020411.1|DR020411 STRS1_36_F08.g1_A034 Shoot tip pitch... 150 2e-039
gb|CO168677.1|CO168677 NDL1_1_F03.g1_A029 Needles control P... 85 3e-039
gb|CF478836.1|CF478836 RTWW3_15_F06.g1_A022 Well-watered lo... 72 4e-039
gb|DR056492.1|DR056492 RTCA1_30_D07.g1_A029 Roots minus cal... 78 4e-039
gb|DN614715.1|DN614715 EST967765 Subtracted pine embryo lib... 116 4e-039
gb|CV035963.1|CV035963 RTNACL1_43_E04.g1_A029 Roots plus ad... 157 7e-039
gb|CO165056.1|CO165056 FLD1_52_C03.b1_A029 Root flooded Pin... 87 7e-039
gb|DR025391.1|DR025391 STRS1_71_H02.b1_A034 Shoot tip pitch... 93 7e-039
gb|CF391928.1|CF391928 RTDR3_10_C10.g1_A022 Loblolly pine r... 73 7e-039
gb|DN448778.1|DN448778 EST944577 Sequencing ESTs from loblo... 113 8e-039
gb|DR025010.1|DR025010 STRS1_69_B12.b1_A034 Shoot tip pitch... 94 9e-039
gb|DR092479.1|DR092479 STRR1_1_D06.g1_A033 Stem Response Re... 68 9e-039
gb|DR166815.1|DR166815 RTPHOS1_14_E01.g1_A029 Roots minus p... 68 9e-039
gb|CV036467.1|CV036467 RTNACL1_59_A08.g1_A029 Roots plus ad... 101 9e-039
gb|DR058106.1|DR058106 RTNIT1_9_F04.g1_A029 Roots minus nit... 96 9e-039
gb|CF479650.1|CF479650 RTWW3_11_F11.g1_A022 Well-watered lo... 101 9e-039
gb|DR019654.1|DR019654 STRS1_31_B07.g1_A034 Shoot tip pitch... 68 9e-039
gb|DN457526.1|DN457526 EST953325 Sequencing ESTs from loblo... 113 1e-038
gb|CR392234.1|CR392234 CR392234 RN Pinus pinaster cDNA clon... 92 1e-038
gb|CF403089.1|CF403089 RTWW1_24_F04.g1_A015 Well-watered lo... 71 1e-038
gb|CF386497.1|CF386497 RTDR1_14_C02.g1_A015 Loblolly pine r... 71 1e-038
gb|CX648292.1|CX648292 COLD1_27_F01.g1_A029 Root cold Pinus... 63 1e-038
gb|DT624332.1|DT624332 EST1158607 Sequencing ESTs from lobl... 113 1e-038
gb|CF392395.1|CF392395 RTDR3_7_B06.g1_A022 Loblolly pine ro... 114 2e-038
gb|CO199477.1|CO199477 GEO2_1_A09.g1_A032 Root gravitropism... 77 2e-038
gb|DR689651.1|DR689651 EST1079737 Normalized pine embryo li... 74 2e-038
gb|BX681726.1|BX681726 BX681726 RS Pinus pinaster cDNA clon... 97 2e-038
gb|DR112272.1|DR112272 RTS1_27_C02.b1_A029 Roots minus sulf... 121 2e-038
gb|DR693875.1|DR693875 EST1083965 Normalized pine embryo li... 116 2e-038
gb|CO160864.1|CO160864 FLD1_25_D04.b1_A029 Root flooded Pin... 108 2e-038
gb|CO365966.1|CO365966 RTK1_20_G03.b1_A029 Roots minus pota... 108 2e-038
gb|BQ699222.1|BQ699222 NXRV121_A06_F NXRV (Nsf Xylem Root w... 123 3e-038
gb|CF663333.1|CF663333 RTCNT1_2_F01.b1_A029 Root control Pi... 84 3e-038
gb|DR078140.1|DR078140 RTFEPL1_2_D10.b1_A029 Roots plus add... 68 3e-038
gb|DR057854.1|DR057854 RTNIT1_8_F01.b1_A029 Roots minus nit... 108 4e-038
gb|DR097379.1|DR097379 STRR1_34_G07.b1_A033 Stem Response R... 81 4e-038
gb|DR050396.1|DR050396 RTBOR1_23_E09.b1_A029 Roots plus add... 78 4e-038
gb|CF402460.1|CF402460 RTWW1_17_A06.g1_A015 Well-watered lo... 71 4e-038
gb|CF667757.1|CF667757 RTCNT1_32_H01.b1_A029 Root control P... 71 4e-038
gb|DR021619.1|DR021619 STRS1_45_H03.g1_A034 Shoot tip pitch... 115 4e-038
gb|CF470435.1|CF470435 RTDS1_17_F06.g1_A015 Drought-stresse... 72 4e-038
gb|DR061148.1|DR061148 RTNIT1_32_H07.b1_A029 Roots minus ni... 72 6e-038
gb|CF670585.1|CF670585 RTCNT1_51_E09.b1_A029 Root control P... 72 6e-038
gb|DR016861.1|DR016861 STRS1_12_D06.g1_A034 Shoot tip pitch... 68 6e-038
gb|CF398318.1|CF398318 RTDS3_24_E08.g1_A022 Drought-stresse... 69 6e-038
gb|DR060269.1|DR060269 RTNIT1_26_G01.g1_A029 Roots minus ni... 103 7e-038
gb|DR094864.1|DR094864 STRR1_17_F11.b1_A033 Stem Response R... 92 8e-038
gb|DR685336.1|DR685336 EST1075413 Normalized pine embryo li... 114 8e-038
gb|CF475874.1|CF475874 RTWW2_15_B12.g1_A021 Well-watered lo... 66 8e-038
gb|DR090620.1|DR090620 RTAL1_16_G09.b1_A029 Roots plus adde... 72 8e-038
gb|DR072085.1|DR072085 RTDK1_24_B05.b1_A029 Roots, dark Pin... 72 8e-038
gb|CF384952.1|CF384952 RTDR1_1_B07.b1_A015 Loblolly pine ro... 72 8e-038
gb|DR093649.1|DR093649 STRR1_9_C07.g1_A033 Stem Response Re... 73 9e-038
gb|CR392984.1|CR392984 CR392984 RN Pinus pinaster cDNA clon... 158 1e-037
gb|CO201166.1|CO201166 RTCNT2_4_C01.b1_A029 Root control 2 ... 69 1e-037
>gb|DR024613.1|DR024613 STRS1_66_E01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_66_E01_A034 3', mRNA sequence
Length = 847
Score = 187 bits (403), Expect(4) = 9e-085
Identities = 76/114 (66%), Positives = 87/114 (76%)
Frame = +2 / -1
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
VGFY +CP AE+IV + V A+ NSGVAP LIRMHFHDCFVRGCDGSVLID+ N TA
Sbjct: 796 VGFYRWSCPAAESIVFEAVRTAYMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDSTANNTA 617
Query: 257 EKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGY 418
EKD+P NNPSL F+V+D AK+ LE CP VSCAD+LAFAARDS L+ GY
Sbjct: 616 EKDSPANNPSLHGFEVIDAAKSRLEVVCPNTVSCADILAFAARDSAKLASPYGY 455
Score = 105 bits (224), Expect(4) = 9e-085
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +2 / -1
Query: 407 GLGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGV 586
GL + VP GRRDGRIS ++ NLPPPF N T+L FA+K L+ E++V+LSGAHTIGV
Sbjct: 454 GLSWDVPAGRRDGRISRASDIAGNLPPPFLNVTQLTQFFAAKGLSQEEMVILSGAHTIGV 275
Query: 587 SHCSGF 604
SHCS F
Sbjct: 274 SHCSSF 257
Score = 105 bits (223), Expect(2) = 2e-029
Identities = 52/94 (55%), Positives = 59/94 (62%)
Frame = -1 / +3
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL G SFSAV L S+ T+PS PLTKQSWKC+R
Sbjct: 516 QETVFGQTTSNLDFAASITSNP*RLGLLAGLSFSAVLLAVESMRTDPSHPLTKQSWKCIR 695
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPT 76
+S GATP F+ A T TM SA G + *KPT
Sbjct: 696 MSPGATPLFFMYAVRTASNTMDSAAGQLQR*KPT 797
Score = 45.5 bits (93), Expect(2) = 2e-029
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -1 / +3
Query: 594 QCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
Q +TP+VCAPES T SS R L A + V KNGGG+ S + +I
Sbjct: 267 Q*DTPIVCAPESMTISSCDRPLAAKNWVNCVTFKNGGGKFPAISEAREI 413
Score = 42.8 bits (87), Expect(4) = 9e-085
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2 / -1
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDS 886
TTV M+++TP DN Y L GLF SD ALLT+ +V++
Sbjct: 142 TTVPMEIVTPNTLDNVYYDELKRKHGLFTSDAALLTDPNTNNVVNA 5
Score = 37.3 bits (75), Expect(4) = 9e-085
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2 / -1
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNF++ DP+L YA +LK+ CP
Sbjct: 256 VSRLYNFNATFQTDPSLDPNYANILKARCP 167
>gb|DR060871.1|DR060871 RTNIT1_30_C05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_C05_A029 5', mRNA sequence
Length = 777
Score = 189 bits (407), Expect(4) = 9e-085
Identities = 77/114 (67%), Positives = 88/114 (77%)
Frame = +2 / +3
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
VGFY +CP AE+IV + V AA+ NSGVAP LIRMHFHDCFVRGCDGSVLID+ N TA
Sbjct: 15 VGFYRWSCPAAESIVFEAVRAAYMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDSTANNTA 194
Query: 257 EKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGY 418
EKD+P NNPSL F+V+D AK+ LE CP VSCAD+LAFAARDS L+ GY
Sbjct: 195 EKDSPANNPSLHGFEVIDAAKSRLEVVCPNTVSCADILAFAARDSTKLASPYGY 356
Score = 106 bits (227), Expect(2) = 5e-030
Identities = 53/94 (56%), Positives = 60/94 (63%)
Frame = -1 / -3
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL G SFSAV L S+ T+PS PLTKQSWKC+R
Sbjct: 295 QETVFGQTTSNLDFAASITSNP*RLGLLAGLSFSAVLLAVESMRTDPSHPLTKQSWKCIR 116
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPT 76
+S GATP F+ AA T TM SA G + *KPT
Sbjct: 115 MSPGATPLFFMYAARTASNTMDSAAGQLQR*KPT 14
Score = 105 bits (224), Expect(4) = 9e-085
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +2 / +3
Query: 407 GLGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGV 586
GL + VP GRRDGRIS ++ NLPPPF N T+L FA+K L+ E++V+LSGAHTIGV
Sbjct: 357 GLSWDVPAGRRDGRISRASDIAGNLPPPFLNVTQLTQFFAAKGLSQEEMVILSGAHTIGV 536
Query: 587 SHCSGF 604
SHCS F
Sbjct: 537 SHCSSF 554
Score = 45.5 bits (93), Expect(2) = 5e-030
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -1 / -3
Query: 594 QCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
Q +TP+VCAPES T SS R L A + V KNGGG+ S + +I
Sbjct: 544 Q*DTPIVCAPESMTISSCDRPLAAKNWVNCVTFKNGGGKFPAISEAREI 398
Score = 40.9 bits (83), Expect(4) = 9e-085
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +2 / +3
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLT 856
TTV M+++TP DN Y L GLF SD ALLT
Sbjct: 669 TTVPMEIVTPNTLDNVYYDELKRKHGLFTSDAALLT 776
Score = 37.3 bits (75), Expect(4) = 9e-085
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNF++ DP+L YA +LK+ CP
Sbjct: 555 VSRLYNFNATFQTDPSLDPNYANILKARCP 644
>gb|CO161849.1|CO161849 FLD1_31_C06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_31_C06_A029 5', mRNA sequence
Length = 888
Score = 171 bits (369), Expect(4) = 4e-084
Identities = 71/108 (65%), Positives = 82/108 (75%)
Frame = +2 / +2
Query: 80 GFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAE 259
GFYD +CP AE+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N TAE
Sbjct: 17 GFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNTAE 196
Query: 260 KDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
KD+ NNPSL FDV+D AK+ LE CP VSCAD++AFAARDS L+
Sbjct: 197 KDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSAKLA 340
Score = 96.4 bits (204), Expect(4) = 4e-084
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 359 LGWNVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 538
Query: 590 HCSGF 604
HC+ F
Sbjct: 539 HCTSF 553
Score = 95.5 bits (202), Expect(3) = 6e-032
Identities = 51/93 (54%), Positives = 58/93 (62%)
Frame = -1 / -1
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 294 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCIL 115
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KP 79
+S GAT LF NA+ T T+ SA G + S*KP
Sbjct: 114 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KP 16
Score = 62.9 bits (131), Expect(4) = 4e-084
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = +2 / +2
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDS 886
TTVFMD+ITPE DN Y GL N GLF SDVALLT+ +VD+
Sbjct: 668 TTVFMDIITPETLDNLYYDGLLNKHGLFTSDVALLTDPNTATVVDA 805
Score = 44.1 bits (90), Expect(3) = 6e-032
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 882 STRAFIVALVSSATSDLKRPRLLVRPTYYLLSNLSGVMRSMNTVV 748
ST + VS+ATS++ +P L RP+ LS +SGV+ SMNTVV
Sbjct: 801 STTVAVFGSVSNATSEVNKPCLFRRPS**RLSRVSGVIISMNTVV 667
Score = 42.8 bits (87), Expect(3) = 6e-032
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G +R S + +I
Sbjct: 546 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVRTSEASEI 397
Score = 39.6 bits (80), Expect(4) = 4e-084
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L YA LLK CP
Sbjct: 554 VTRLYNFSTTIPTDPSLDPKYAALLKEKCP 643
>gb|DR079785.1|DR079785 RTFEPL1_17_D11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_17_D11_A029 5', mRNA sequence
Length = 783
Score = 177 bits (380), Expect(4) = 6e-084
Identities = 74/115 (64%), Positives = 85/115 (73%)
Frame = +2 / +1
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 22 EVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 201
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGY 418
AEKD+ NNPSL FDV+D AK+ LE CP VSCAD+LAFAARDS L+ Y
Sbjct: 202 AEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADILAFAARDSAKLASPYQY 366
Score = 101 bits (216), Expect(3) = 1e-032
Identities = 54/96 (56%), Positives = 61/96 (63%)
Frame = -1 / -2
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 305 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCIL 126
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 125 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KPTSR 18
Score = 95.5 bits (202), Expect(4) = 6e-084
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +2 / +1
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN +L FASK L+ D+V+LSGAH+IGVS
Sbjct: 370 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVNQLTQSFASKGLSQNDMVILSGAHSIGVS 549
Query: 590 HCSGF 604
HC+ F
Sbjct: 550 HCTSF 564
Score = 56.1 bits (116), Expect(4) = 6e-084
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = +2 / +1
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALL 853
TTVFMD+ITPE DN Y GL N GLF SDVALL
Sbjct: 679 TTVFMDIITPETLDNLYYDGLLNKHGLFTSDVALL 783
Score = 41.8 bits (85), Expect(4) = 6e-084
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2 / +1
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ IDP+L YA LLK CP
Sbjct: 565 VTRLYNFSTTIPIDPSLDPKYAALLKEKCP 654
Score = 41.8 bits (85), Expect(3) = 1e-032
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -1 / -2
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + LK G G +R S + +I
Sbjct: 557 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWFTLKVGAGIFVRTSEASEI 408
Score = 40.9 bits (83), Expect(3) = 1e-032
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1 / -2
Query: 852 SSATSDLKRPRLLVRPTYYLLSNLSGVMRSMNTVV 748
SSATS++ +P L RP+ LS +SGV+ SMNTVV
Sbjct: 782 SSATSEVNKPCLFRRPS**RLSRVSGVIISMNTVV 678
>gb|CF388014.1|CF388014 RTDR1_17_B01.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_17_B01_A015 5', mRNA
sequence
Length = 763
Score = 176 bits (379), Expect(4) = 5e-077
Identities = 72/108 (66%), Positives = 84/108 (77%)
Frame = +2 / +2
Query: 80 GFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAE 259
GFYD +CP AE+ V + V AF + VAP LIRMHFHDCFVRGCDGSVLID++ N TAE
Sbjct: 2 GFYDHSCP*AESTVFEVVRDAFLKSREVAPGLIRMHFHDCFVRGCDGSVLIDSIANNTAE 181
Query: 260 KDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
KD+P NNPSL +DV+D AK+ LEA CP VSCAD+LAFAARDS L+
Sbjct: 182 KDSPVNNPSLHGYDVIDTAKSRLEAICPNTVSCADILAFAARDSTKLA 325
Score = 99.1 bits (210), Expect(3) = 5e-028
Identities = 52/93 (55%), Positives = 60/93 (64%)
Frame = -1 / -2
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G AS+ A S TS RLGLL G SFSAV L S+ T+PS PLTKQSWKC+
Sbjct: 279 QETVFGQMASNLDFAVSITSYP*RLGLLTGLSFSAVLLAMESMRTDPSHPLTKQSWKCIL 100
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KP 79
+S GAT LF NA+ T T+ SA G + S*KP
Sbjct: 99 MSPGATSRLFRNASLTTSNTVDSAYGQL*S*KP 1
Score = 91.3 bits (193), Expect(4) = 5e-077
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
L + VP GRRDG IS +E N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 344 LSWDVPAGRRDGIISLASEVATNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 523
Query: 590 HCSGF 604
HC+ F
Sbjct: 524 HCTSF 538
Score = 44.6 bits (91), Expect(4) = 5e-077
Identities = 21/37 (56%), Positives = 22/37 (59%)
Frame = +2 / +2
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTN 859
TTVFMD TPE DN Y GL GLF S LLT+
Sbjct: 653 TTVFMDTYTPETIDNLYYNGLLEKHGLFTSRCTLLTD 763
Score = 40.0 bits (81), Expect(3) = 5e-028
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = -1 / -2
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G + S + +I
Sbjct: 531 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVATSEASEI 382
Score = 34.5 bits (69), Expect(4) = 5e-077
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L A +LK CP
Sbjct: 539 VTRLYNFSTTIPTDPSLDPMLADILKKKCP 628
Score = 29.5 bits (58), Expect(3) = 5e-028
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1 / -2
Query: 855 VSSATSDLKRPRLLVRPTYYLLSNLSGVMRSMNTVV 748
VSS ++ +P RP LS +SGV SMNTVV
Sbjct: 759 VSSVHREVNKPCFSRRPL**RLSIVSGVYVSMNTVV 652
>gb|CX652982.1|CX652982 COLD1_62_E03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_E03_A029 5', mRNA sequence
Length = 796
Score = 176 bits (378), Expect(4) = 1e-074
Identities = 71/109 (65%), Positives = 84/109 (77%)
Frame = +2 / +2
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
VGFY+ +CP AE+ V + V AF ++ VAP LIRMHFHDCFVRGCDGS+LID+ TA
Sbjct: 89 VGFYNCSCPEAESTVFEVVRDAFLDSREVAPGLIRMHFHDCFVRGCDGSILIDSTATSTA 268
Query: 257 EKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
EKD+P NNPSL FDV+DRAK+ LE CP VSCAD+LAFAARDS L+
Sbjct: 269 EKDSPVNNPSLHGFDVIDRAKSRLETMCPNTVSCADILAFAARDSAKLA 415
Score = 94.5 bits (200), Expect(2) = 1e-024
Identities = 50/113 (44%), Positives = 60/113 (53%)
Frame = -1 / -2
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET GH S+ A S TS RLGLL G SFSAV + SI +PS P TKQSWKC+
Sbjct: 369 QETVFGHMVSNRDFALSITSNPWRLGLLTGLSFSAVLVAVESIRIDPSHPRTKQSWKCIL 190
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSRQAAVAERSVVARTVVKR 19
+S GAT L NA+ T T+ SA G + * PT R + +R
Sbjct: 189 MSPGATSRLSRNASLTTSNTVDSASGQLQL*NPTLRSPLTPAAMLAQNNTARR 31
Score = 92.7 bits (196), Expect(4) = 1e-074
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
L + VP GRRDG IS +E L N+P P FN ++L FA+K L+ E++++LSGAH+IGVS
Sbjct: 434 LSWDVPAGRRDGIISLASEVLTNIPAPTFNLSQLTQSFAAKGLSQEEMIILSGAHSIGVS 613
Query: 590 HCSGF 604
HCS F
Sbjct: 614 HCSSF 628
Score = 39.6 bits (80), Expect(4) = 1e-074
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFSS DP++ YA LLK CP
Sbjct: 629 VKRLYNFSSTIQTDPSIDPQYAGLLKEKCP 718
Score = 39.6 bits (80), Expect(2) = 1e-024
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = -1 / -2
Query: 594 QCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
Q ETP+ CAPES SS R L A L + + LK G G +R S + +I
Sbjct: 618 Q*ETPIECAPESIIISSWDRPLAAKLCVNWLRLKVGAGIFVRTSEASEI 472
Score = 30.9 bits (61), Expect(4) = 1e-074
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / +2
Query: 749 TTVFMDLITPERFDNK*Y 802
TTVFM++ITPE DN Y
Sbjct: 743 TTVFMNIITPETLDNLYY 796
>gb|DT631437.1|DT631437 EST1146368 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF876 3' end, mRNA sequence
Length = 933
Score = 174 bits (375), Expect(4) = 2e-074
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2 / +3
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 186 EVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 365
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
AEKD+ NNPSL FDV+D AK+ LE CP VSCAD++AFAARDS L+
Sbjct: 366 AEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSAKLA 515
Score = 101 bits (216), Expect(2) = 1e-027
Identities = 54/96 (56%), Positives = 61/96 (63%)
Frame = -1 / -3
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 469 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCIL 290
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 289 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KPTSR 182
Score = 96.4 bits (204), Expect(4) = 2e-074
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2 / +3
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 534 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 713
Query: 590 HCSGF 604
HC+ F
Sbjct: 714 HCTSF 728
Score = 42.8 bits (87), Expect(2) = 1e-027
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1 / -3
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G +R S + +I
Sbjct: 721 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVRTSEASEI 572
Score = 39.6 bits (80), Expect(4) = 2e-074
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L YA LLK CP
Sbjct: 729 VTRLYNFSTTIPTDPSLDPKYAALLKEKCP 818
Score = 27.6 bits (54), Expect(4) = 2e-074
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 749 TTVFMDLITPE 781
TTVFMD+ITPE
Sbjct: 843 TTVFMDIITPE 875
>gb|DR050769.1|DR050769 RTBOR1_25_C07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_C07_A029 5', mRNA sequence
Length = 836
Score = 177 bits (382), Expect(3) = 1e-073
Identities = 73/115 (63%), Positives = 86/115 (74%)
Frame = +2 / +2
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF + VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 155 EVGFYDHSCPKAESTVFEVVRHAFLKSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 334
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGY 418
AEKD+P NNPSL FDV++ AK+ LEA CP VSCAD++AFAARDS L+ Y
Sbjct: 335 AEKDSPINNPSLHGFDVIETAKSRLEAICPNTVSCADIVAFAARDSTKLASPYHY 499
Score = 108 bits (230), Expect(2) = 2e-029
Identities = 57/96 (59%), Positives = 62/96 (64%)
Frame = -1 / -3
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G AS+ A S TS RLGLL G SFSAV L SI TEPS PLTKQSWKC+
Sbjct: 438 QETVFGQMASNLDFAVSITSNP*RLGLLIGLSFSAVLLAVESIRTEPSHPLTKQSWKCIL 259
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA T T+ SA G + S*KPTSR
Sbjct: 258 MSPGATSRLFRNACLTTSNTVDSAFGQL*S*KPTSR 151
Score = 98.2 bits (208), Expect(3) = 1e-073
Identities = 39/65 (60%), Positives = 49/65 (75%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E N+P P FN ++L RFASK L+ +D+V+LSGAH+IGVS
Sbjct: 503 LGWDVPAGRRDGIISLASEVATNIPAPTFNVSQLTQRFASKGLSQKDMVILSGAHSIGVS 682
Query: 590 HCSGF 604
HCS F
Sbjct: 683 HCSSF 697
Score = 42.3 bits (86), Expect(2) = 2e-029
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = -1 / -3
Query: 594 QCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
Q ETP+ CAPES T S R L+ANL + + LK G G + S + +I
Sbjct: 687 Q*ETPIECAPESITMSFWDRPLDANLCVNWLTLKVGAGIFVATSEASEI 541
Score = 41.4 bits (84), Expect(3) = 1e-073
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFSS DP+L YA LLK CP
Sbjct: 698 VSRLYNFSSTIPTDPSLDPKYAALLKEKCP 787
>gb|CF387989.1|CF387989 RTDR1_17_C01.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_17_C01_A015 5', mRNA
sequence
Length = 712
Score = 181 bits (389), Expect(4) = 3e-072
Identities = 74/110 (67%), Positives = 86/110 (78%)
Frame = +2 / +2
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
DVGFYD +CP AE+ V + V AF + VAP LIRMHFHDCFVRGCDGSVLID++ N T
Sbjct: 17 DVGFYDHSCP*AESTVFEVVRDAFLKSREVAPGLIRMHFHDCFVRGCDGSVLIDSIANNT 196
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
AEKD+P NNPSL +DV+D AK+ LEA CP VSCAD+LAFAARDS L+
Sbjct: 197 AEKDSPVNNPSLHGYDVIDTAKSRLEAICPNTVSCADILAFAARDSTKLA 346
Score = 104 bits (221), Expect(2) = 1e-027
Identities = 55/96 (57%), Positives = 63/96 (65%)
Frame = -1 / -2
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G AS+ A S TS RLGLL G SFSAV L S+ T+PS PLTKQSWKC+
Sbjct: 300 QETVFGQMASNLDFAVSITSYP*RLGLLTGLSFSAVLLAMESMRTDPSHPLTKQSWKCIL 121
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 120 MSPGATSRLFRNASLTTSNTVDSA*GQL*S*KPTSR 13
Score = 91.3 bits (193), Expect(4) = 3e-072
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
L + VP GRRDG IS +E N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 365 LSWDVPAGRRDGIISLASEVATNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 544
Query: 590 HCSGF 604
HC+ F
Sbjct: 545 HCTSF 559
Score = 40.0 bits (81), Expect(2) = 1e-027
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = -1 / -2
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G + S + +I
Sbjct: 552 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVATSEASEI 403
Score = 34.5 bits (69), Expect(4) = 3e-072
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L A +LK CP
Sbjct: 560 VTRLYNFSTTIPTDPSLDPMLADILKKKCP 649
Score = 24.0 bits (46), Expect(4) = 3e-072
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 749 TTVFMDLITPE 781
TTVFMD TPE
Sbjct: 674 TTVFMDTYTPE 706
>gb|CO201890.1|CO201890 RTCNT2_8_F12.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_8_F12_A029 5', mRNA sequence
Length = 766
Score = 178 bits (384), Expect(3) = 4e-072
Identities = 74/115 (64%), Positives = 85/115 (73%)
Frame = +2 / +3
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF NN VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 126 EVGFYDYSCPKAESTVFEVVRDAFLNNREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 305
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGY 418
AEKD+ NNPSL FDV+D AK+ LE CP +SCAD+LAFAARDS L+ Y
Sbjct: 306 AEKDSIVNNPSLHGFDVIDTAKSRLETICPNTISCADILAFAARDSAKLASPYQY 470
Score = 99.1 bits (210), Expect(2) = 8e-026
Identities = 53/96 (55%), Positives = 60/96 (62%)
Frame = -1 / -1
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QE G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 409 QEIVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCIL 230
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 229 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KPTSR 122
Score = 93.6 bits (198), Expect(3) = 4e-072
Identities = 37/65 (56%), Positives = 47/65 (72%)
Frame = +2 / +3
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E N+P P FN +L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 474 LGWDVPAGRRDGIISLASEVATNIPAPTFNVNQLTQSFASKGLSQKDMVILSGAHSIGVS 653
Query: 590 HCSGF 604
HC+ F
Sbjct: 654 HCTSF 668
Score = 39.6 bits (80), Expect(3) = 4e-072
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L YA LLK CP
Sbjct: 669 VTRLYNFSTTIPTDPSLDPKYAALLKEKCP 758
Score = 39.1 bits (79), Expect(2) = 8e-026
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = -1 / -1
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + LK G G + S + +I
Sbjct: 661 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWFTLKVGAGIFVATSEASEI 512
>gb|DR079581.1|DR079581 RTFEPL1_12_E11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_12_E11_A029 3', mRNA sequence
Length = 866
Score = 155 bits (334), Expect(4) = 1e-071
Identities = 63/87 (72%), Positives = 69/87 (79%)
Frame = +2 / +2
Query: 140 AFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEKDAPPNNPSLRFFDVVDRAK 319
AF NSGVAP LIRMHFHDCFVRGCDGSVLID+ + AEKD+P NNPSL FDV+D AK
Sbjct: 5 AFMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDSTASNIAEKDSPANNPSLHGFDVIDAAK 184
Query: 320 ASLEAQCPGVVSCADVLAFAARDSVVL 400
+ LE CP VSCAD+LAFAARDS L
Sbjct: 185 SRLEKDCPNTVSCADILAFAARDSAKL 265
Score = 104 bits (221), Expect(4) = 1e-071
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +2 / +1
Query: 407 GLGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGV 586
GL + VP GRRDGRIS ++ NLPPPFFN T+L F++K L+ E++V+LSGAHTIGV
Sbjct: 388 GLSWDVPAGRRDGRISRASDIAENLPPPFFNVTQLTQIFSAKGLSQEEMVILSGAHTIGV 567
Query: 587 SHCS 598
SHCS
Sbjct: 568 SHCS 579
Score = 91.8 bits (194), Expect(2) = 8e-025
Identities = 43/73 (58%), Positives = 49/73 (67%)
Frame = -1 / -3
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL G SFSA+ L SI T+PS PLTKQSWKC+R
Sbjct: 222 QETVFGQSFSNLDFAASMTSNP*RLGLLAGLSFSAILLAVESIRTDPSHPLTKQSWKCIR 43
Query: 177 ISAGATPELFLNA 139
+S GATP F+NA
Sbjct: 42 MSPGATPLFFMNA 4
Score = 46.4 bits (95), Expect(2) = 8e-025
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -1 / -1
Query: 594 QCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
Q +TP+VCAPES T SS R L + S V LK GGG+ S + +I
Sbjct: 575 Q*DTPIVCAPESMTISSCDRPLAEKIWVSCVTLKKGGGKFSAISEAREI 429
Score = 37.7 bits (76), Expect(4) = 1e-071
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALL 853
TTV M+++TP DN Y L GLF SD ALL
Sbjct: 761 TTVPMEIMTPNTLDNVYYDELKRKHGLFTSDAALL 865
Score = 37.7 bits (76), Expect(4) = 1e-071
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2 / +2
Query: 608 GPTDLNGPVDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
G + + V RLYNF++ DP+L YA +LK+ CP
Sbjct: 623 GVSHCSSLVSRLYNFNATFQTDPSLDPNYANILKARCP 736
>gb|CF400609.1|CF400609 RTWW1_6_D05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_D05_A015 5', mRNA sequence
Length = 752
Score = 188 bits (405), Expect(2) = 2e-071
Identities = 76/114 (66%), Positives = 87/114 (76%)
Frame = +2 / +1
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
VGFY +CP AE+IV + V A+ NSGVAP LIRMHFHDCFVRGCDGSVLID+ N TA
Sbjct: 214 VGFYRWSCPAAESIVFEAVRTAYMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDSTANNTA 393
Query: 257 EKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGY 418
EKD+P NNPSL F+V+D AK+ LE CP VSCAD+LAFAARDS L+ GY
Sbjct: 394 EKDSPANNPSLHGFEVIDAAKSRLEVVCPNTVSCADILAFAARDSATLASPYGY 555
Score = 105 bits (223), Expect(2) = 2e-029
Identities = 52/94 (55%), Positives = 59/94 (62%)
Frame = -1 / -1
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL G SFSAV L S+ T+PS PLTKQSWKC+R
Sbjct: 494 QETVFGQTTSNLDFAASITSNP*RLGLLAGLSFSAVLLAVESMRTDPSHPLTKQSWKCIR 315
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPT 76
+S GATP F+ A T TM SA G + *KPT
Sbjct: 314 MSPGATPLFFMYAVRTASNTMDSAAGQLQR*KPT 213
Score = 102 bits (218), Expect(2) = 2e-071
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +2 / +1
Query: 407 GLGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGV 586
GL + VP GRRDGRIS ++ NLPPPF N T+L FA+K L+ E++V+LSGAHTIGV
Sbjct: 556 GLSWDVPAGRRDGRISRASDIAGNLPPPFLNVTQLTQFFAAKGLSQEEMVILSGAHTIGV 735
Query: 587 SHCS 598
SHCS
Sbjct: 736 SHCS 747
Score = 45.5 bits (93), Expect(2) = 2e-029
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -1 / -1
Query: 594 QCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
Q +TP+VCAPES T SS R L A + V KNGGG+ S + +I
Sbjct: 743 Q*DTPIVCAPESMTISSCDRPLAAKNWVNCVTFKNGGGKFPAISEAREI 597
>gb|CF389670.1|CF389670 RTDR2_8_D11.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_D11_A021 5', mRNA
sequence
Length = 768
Score = 129 bits (277), Expect(4) = 5e-071
Identities = 52/74 (70%), Positives = 59/74 (79%)
Frame = +2 / +2
Query: 182 MHFHDCFVRGCDGSVLIDTVGNLTAEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCA 361
MHFHDCFVRGCDGSVLID+ N TAEKD+ NNPSL FDV+D AK+ LE CP VSCA
Sbjct: 5 MHFHDCFVRGCDGSVLIDSTANNTAEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCA 184
Query: 362 DVLAFAARDSVVLS 403
D++AFAARDS L+
Sbjct: 185 DIVAFAARDSAKLA 226
Score = 96.4 bits (204), Expect(4) = 5e-071
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 245 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 424
Query: 590 HCSGF 604
HC+ F
Sbjct: 425 HCTSF 439
Score = 65.7 bits (137), Expect(3) = 5e-023
Identities = 34/59 (57%), Positives = 37/59 (62%)
Frame = -1 / -1
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCM 181
QET G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 180 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCI 4
Score = 61.1 bits (127), Expect(4) = 5e-071
Identities = 27/46 (58%), Positives = 31/46 (67%)
Frame = +2 / +2
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDS 886
TTVFMD+ITPE DN Y GL N GLF SD ALLT+ +VD+
Sbjct: 554 TTVFMDIITPETLDNLYYDGLLNKHGLFTSDAALLTDPNTATVVDA 691
Score = 43.2 bits (88), Expect(3) = 5e-023
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = -1 / -1
Query: 882 STRAFIVALVSSATSDLKRPRLLVRPTYYLLSNLSGVMRSMNTVV 748
ST + VSSA S++ +P L RP+ LS +SGV+ SMNTVV
Sbjct: 687 STTVAVFGSVSSAASEVNKPCLFRRPS**RLSRVSGVIISMNTVV 553
Score = 42.8 bits (87), Expect(3) = 5e-023
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G +R S + +I
Sbjct: 432 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVRTSEASEI 283
Score = 39.6 bits (80), Expect(4) = 5e-071
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L YA LLK CP
Sbjct: 440 VTRLYNFSTTIPTDPSLDPKYAALLKEKCP 529
>gb|DR090425.1|DR090425 RTAL1_15_A06.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_15_A06_A029 3', mRNA sequence
Length = 766
Score = 177 bits (380), Expect(3) = 3e-070
Identities = 74/115 (64%), Positives = 85/115 (73%)
Frame = +2 / -1
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 622 EVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 443
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGY 418
AEKD+ NNPSL FDV+D AK+ LE CP VSCAD+LAFAARDS L+ Y
Sbjct: 442 AEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADILAFAARDSAKLASPYQY 278
Score = 101 bits (216), Expect(2) = 2e-027
Identities = 54/96 (56%), Positives = 61/96 (63%)
Frame = -1 / +3
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 339 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCIL 518
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 519 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KPTSR 626
Score = 95.5 bits (202), Expect(3) = 3e-070
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +2 / -1
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN +L FASK L+ D+V+LSGAH+IGVS
Sbjct: 274 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVNQLTQSFASKGLSQNDMVILSGAHSIGVS 95
Query: 590 HCSGF 604
HC+ F
Sbjct: 94 HCTSF 80
Score = 41.8 bits (85), Expect(2) = 2e-027
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -1 / +3
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + LK G G +R S + +I
Sbjct: 87 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWFTLKVGAGIFVRTSEASEI 236
Score = 33.6 bits (67), Expect(3) = 3e-070
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2 / -1
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLK 709
V RLYNFS+ DP+L YA LLK
Sbjct: 79 VTRLYNFSTTIPTDPSLDPKYAALLK 2
>gb|DR019354.1|DR019354 STRS1_29_B03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_29_B03_A034 5', mRNA sequence
Length = 765
Score = 265 bits (574), Expect = 4e-070
Identities = 108/177 (61%), Positives = 132/177 (74%)
Frame = +2 / +2
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
VG+Y CP AE IV VA A N GVAPALIRMHFHDCFVRGCDGS+LID+ A
Sbjct: 230 VGYYRDRCPEAEAIVGAAVAKAVTANPGVAPALIRMHFHDCFVRGCDGSILIDSTAGNQA 409
Query: 257 EKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGR 436
EK++P NNPSL F+++D AK+ LE +CP VVSCAD+LAFAARDS +GGL ++VP GR
Sbjct: 410 EKESPANNPSLHGFEIIDEAKSILEDKCPNVVSCADILAFAARDSAHQAGGLIWEVPAGR 589
Query: 437 RDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
RDGRIS ++ N+P P FN +L FA+K L++ED+V LSGAH+IGVSHCS F+
Sbjct: 590 RDGRISRASDIPGNIPAPQFNVNQLTQNFAAKFLSVEDMVTLSGAHSIGVSHCSSFS 760
>gb|CF664709.1|CF664709 RTCNT1_11_B04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_11_B04_A029 5', mRNA sequence
Length = 666
Score = 156 bits (336), Expect(4) = 8e-070
Identities = 65/98 (66%), Positives = 75/98 (76%)
Frame = +2 / +3
Query: 110 ETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEKDAPPNNPSL 289
E+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N TAEKD+P NNPSL
Sbjct: 3 ESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNTAEKDSPVNNPSL 182
Query: 290 RFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
FDV+D AK+ LE CP VSCAD++AFAARDS L+
Sbjct: 183 HGFDVIDTAKSRLETICPNTVSCADIVAFAARDSAKLA 296
Score = 96.4 bits (204), Expect(4) = 8e-070
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2 / +3
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 315 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 494
Query: 590 HCSGF 604
HC+ F
Sbjct: 495 HCTSF 509
Score = 89.5 bits (189), Expect(3) = 2e-024
Identities = 46/83 (55%), Positives = 52/83 (62%)
Frame = -1 / -3
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL G SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 250 QETVFGQMVSNLDFAVSITSNP*RLGLLTGLSFSAVLLAVESMRTEPSHPLTKQSWKCIL 71
Query: 177 ISAGATPELFLNAAATVCCTMVS 109
+S GAT LF NA+ T T+ S
Sbjct: 70 MSPGATSRLFRNASLTTSNTVDS 2
Score = 42.8 bits (87), Expect(3) = 2e-024
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1 / -3
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G +R S + +I
Sbjct: 502 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVRTSEASEI 353
Score = 39.6 bits (80), Expect(4) = 8e-070
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2 / +3
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L YA LLK CP
Sbjct: 510 VTRLYNFSTTIPTDPSLDPKYAALLKEKCP 599
Score = 29.9 bits (59), Expect(4) = 8e-070
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 749 TTVFMDLITPERFD 790
TTVFMD+ITPE D
Sbjct: 624 TTVFMDIITPETLD 665
Score = 23.5 bits (45), Expect(3) = 2e-024
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 789 SNLSGVMRSMNTVV 748
S +SGV+ SMNTVV
Sbjct: 664 SRVSGVIISMNTVV 623
>gb|DR079660.1|DR079660 RTFEPL1_12_E11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_12_E11_A029 5', mRNA sequence
Length = 831
Score = 178 bits (384), Expect(2) = 5e-069
Identities = 73/108 (67%), Positives = 83/108 (76%)
Frame = +2 / +1
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
VGFY +CP AE+IV + + AF NSGVAP LIRMHFHDCFVRGCDGSVLID+ + A
Sbjct: 109 VGFYRWSCPAAESIVFEALRNAFMKNSGVAPGLIRMHFHDCFVRGCDGSVLIDSTASNIA 288
Query: 257 EKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVL 400
EKD+P NNPSL FDV+D AK+ LE CP VSCAD+LAFAARDS L
Sbjct: 289 EKDSPANNPSLHGFDVIDAAKSRLEKDCPNTVSCADILAFAARDSAKL 432
Score = 105 bits (223), Expect(2) = 8e-029
Identities = 52/94 (55%), Positives = 59/94 (62%)
Frame = -1 / -2
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL G SFSA+ L SI T+PS PLTKQSWKC+R
Sbjct: 389 QETVFGQSFSNLDFAASMTSNP*RLGLLAGLSFSAILLAVESIRTDPSHPLTKQSWKCIR 210
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPT 76
+S GATP F+NA TM SA G + *KPT
Sbjct: 209 MSPGATPLFFMNAFRRASNTMDSAAGQLQR*KPT 108
Score = 104 bits (221), Expect(2) = 5e-069
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +2 / +3
Query: 407 GLGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGV 586
GL + VP GRRDGRIS ++ NLPPPFFN T+L F++K L+ E++V+LSGAHTIGV
Sbjct: 555 GLSWDVPAGRRDGRISRASDIAENLPPPFFNVTQLTQIFSAKGLSQEEMVILSGAHTIGV 734
Query: 587 SHCS 598
SHCS
Sbjct: 735 SHCS 746
Score = 46.4 bits (95), Expect(2) = 8e-029
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = -1 / -3
Query: 594 QCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
Q +TP+VCAPES T SS R L + S V LK GGG+ S + +I
Sbjct: 742 Q*DTPIVCAPESMTISSCDRPLAEKIWVSCVTLKKGGGKFSAISEAREI 596
>dbj|BD224562.1| Materials and methods for the modification of plant lignin content
Length = 1171
Score = 204 bits (441), Expect(3) = 8e-069
Identities = 84/174 (48%), Positives = 115/174 (66%)
Frame = +2 / +1
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FYD++CPTA ++V+ V A N + +L+R+HFHDCFV GCDGSVL+D +T EK
Sbjct: 139 FYDKSCPTALSVVKAAVKQAVANEKRMGASLLRLHFHDCFVNGCDGSVLLDDSSTITGEK 318
Query: 263 DAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRD 442
A PN S R FDV+D K+++E C GVVSCAD+LA AARDSVV GG + V GRRD
Sbjct: 319 TANPNANSARGFDVIDTIKSNVEKACSGVVSCADILAIAARDSVVELGGPSWTVMLGRRD 498
Query: 443 GRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGF 604
++ + A +N+PPP + + L F ++ L+ +++V LSG HTIG + C F
Sbjct: 499 STTASKSGANSNIPPPTSSLSNLISLFQAQGLSAKEMVALSGGHTIGQAQCKNF 660
Score = 73.0 bits (153), Expect(3) = 8e-069
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +2 / +1
Query: 761 MDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDSFVRSEATFRTKFARSMIK 940
+D +TP FD Y L + GL SD L + + V ++ ++ TF + FA +M+K
Sbjct: 766 LDYMTPTVFDKNYYSDLKSQKGLLHSDQELFNGGSTDSQVTTYASNQNTFFSDFAAAMVK 945
Query: 941 MGQIEVLTGTQGEIRRNCRVIN 1006
MG I+ LTGT G+I +NCR N
Sbjct: 946 MGNIKPLTGTSGQIPKNCRKPN 1011
Score = 23.1 bits (44), Expect(3) = 8e-069
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2 / +1
Query: 647 NFSSPDGIDPTLSKAYAFLLKSICPANT 730
NF + + + AYA L+S CP+ T
Sbjct: 655 NFRAHIYNETNIDSAYATSLRSKCPSTT 738
>gb|DR057895.1|DR057895 RTNIT1_8_A09.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_A09_A029 5', mRNA sequence
Length = 810
Score = 100 bits (213), Expect(4) = 9e-069
Identities = 37/67 (55%), Positives = 50/67 (74%)
Frame = +2 / +3
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
VGFY+ C AE+IV+ + + F + + AL+RMHFHDCFV+GCDGS+LID+VGN +
Sbjct: 30 VGFYNTNCSQAESIVRGVITSHFATDKSLPAALLRMHFHDCFVKGCDGSILIDSVGNNVS 209
Query: 257 EKDAPPN 277
EK+A PN
Sbjct: 210 EKEAGPN 230
Score = 90.9 bits (192), Expect(4) = 9e-069
Identities = 35/60 (58%), Positives = 47/60 (78%)
Frame = +2 / +3
Query: 278 NPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISN 457
N ++R F+++D AK LE+ CPGVVSCAD++A A RD+V L+GG Y +P GRRDGRIS+
Sbjct: 228 NLTVRGFEIIDEAKTKLESACPGVVSCADIVALATRDAVFLAGGPQYNLPTGRRDGRISS 407
Score = 64.8 bits (135), Expect(4) = 9e-069
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +2 / +3
Query: 476 NLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
+LP P F +E A FA+K LT++D+V+L GAHT+GV+HCS F+
Sbjct: 420 DLPGPSFQVSEAAAAFANKGLTLQDMVILLGAHTVGVAHCSFFS 551
Score = 62.9 bits (131), Expect(4) = 9e-069
Identities = 31/84 (36%), Positives = 42/84 (50%)
Frame = +2 / +3
Query: 635 DRLYNFSSPDGIDPTLSKAYAFLLKSICPANTSQFFPNTTVFMDLITPERFDNK*YVGLT 814
DRLYNF DP++ LK+ICP+ TS + TVF+D T FDN Y L
Sbjct: 552 DRLYNFQGSGTADPSMDPTLVATLKNICPSPTSSSTQDPTVFLDQNTSFAFDNSYYQQLQ 731
Query: 815 NNLGLFKSDVALLTNATMKALVDS 886
G+ + D L + + K +V S
Sbjct: 732 LKHGILQIDQELTSAGSTKGIVTS 803
>gb|CF671964.1|CF671964 RTCNT1_60_A05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_A05_A029 5', mRNA sequence
Length = 756
Score = 174 bits (375), Expect(3) = 1e-068
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2 / +2
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 140 EVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 319
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
AEKD+ NNPSL FDV+D AK+ LE CP VSCAD++AFAARDS L+
Sbjct: 320 AEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSAKLA 469
Score = 101 bits (216), Expect(2) = 1e-027
Identities = 54/96 (56%), Positives = 61/96 (63%)
Frame = -1 / -1
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 423 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCIL 244
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 243 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KPTSR 136
Score = 96.4 bits (204), Expect(3) = 1e-068
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 488 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 667
Query: 590 HCSGF 604
HC+ F
Sbjct: 668 HCTSF 682
Score = 42.8 bits (87), Expect(2) = 1e-027
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G +R S + +I
Sbjct: 675 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVRTSEASEI 526
Score = 29.5 bits (58), Expect(3) = 1e-068
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFL 703
V RLYNFS+ DP+L YA L
Sbjct: 683 VTRLYNFSTTIPTDPSLDPKYAAL 754
>gb|DR078213.1|DR078213 RTFEPL1_2_D10.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_2_D10_A029 5', mRNA sequence
Length = 751
Score = 174 bits (375), Expect(3) = 4e-068
Identities = 73/115 (63%), Positives = 84/115 (73%)
Frame = +2 / +2
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 140 EVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 319
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGY 418
AEKD+ NNPSL FDV+D AK+ LE CP VSCAD+L FAARDS L+ Y
Sbjct: 320 AEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADILLFAARDSAKLASPYQY 484
Score = 101 bits (216), Expect(2) = 2e-027
Identities = 54/96 (56%), Positives = 61/96 (63%)
Frame = -1 / -2
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 423 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCIL 244
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 243 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KPTSR 136
Score = 95.5 bits (202), Expect(3) = 4e-068
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN +L FASK L+ D+V+LSGAH+IGVS
Sbjct: 488 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVNQLTQSFASKGLSQNDMVILSGAHSIGVS 667
Query: 590 HCSGF 604
HC+ F
Sbjct: 668 HCTSF 682
Score = 41.8 bits (85), Expect(2) = 2e-027
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -1 / -2
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + LK G G +R S + +I
Sbjct: 675 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWFTLKVGAGIFVRTSEASEI 526
Score = 28.6 bits (56), Expect(3) = 4e-068
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYA 697
V RLYNFS+ DP+L YA
Sbjct: 683 VTRLYNFSTTIPTDPSLDPKYA 748
>gb|DR117522.1|DR117522 RTMG1_7_B03.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_B03_A029 5', mRNA sequence
Length = 923
Score = 206 bits (444), Expect(2) = 6e-067
Identities = 88/174 (50%), Positives = 112/174 (64%)
Frame = +2 / +1
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY + CPTA +IV+ V A N + +L+R+HFHDCFV GCDGS+L+D T EK
Sbjct: 82 FYSKVCPTALSIVKAAVTKAVNNEKRMGASLLRLHFHDCFVNGCDGSILLDDNATFTGEK 261
Query: 263 DAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRD 442
A PN S+R FDV+D K +EA C GVVSCAD+LA AARDSVV GG + V GRRD
Sbjct: 262 TAGPNANSVRGFDVIDTIKTQVEAACSGVVSCADILAIAARDSVVQLGGPTWTVLLGRRD 441
Query: 443 GRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGF 604
++ + A NN+P P N + L F + L+ +DLV LSGAHTIG + C+ F
Sbjct: 442 STTASLSAANNNIPSPASNLSALISSFTAHGLSTKDLVALSGAHTIGQARCTTF 603
Score = 73.0 bits (153), Expect(2) = 6e-067
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = +2 / +3
Query: 746 NTTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDSFVRSEATFRTKFA 925
NT +DL TP FDNK Y L + GL SD L + + + V ++ ++ TF T F
Sbjct: 687 NTLSPLDLATPTTFDNKYYTDLRSQKGLLHSDQQLFSGGSTNSQVTTYSSNQNTFFTDFT 866
Query: 926 RSMIKMGQIEVLTGTQGEI 982
+M+KMG I LTGT G+I
Sbjct: 867 AAMVKMGNISPLTGTNGQI 923
>gb|DR164099.1|DR164099 RTFE1_46_G03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_G03_A029 5', mRNA sequence
Length = 860
Score = 95.0 bits (201), Expect(5) = 1e-066
Identities = 39/69 (56%), Positives = 52/69 (75%)
Frame = +2 / +1
Query: 401 SGGLGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTI 580
+ G+ + V GRRDGR+SN +E L+N+P PFFN ++L FA+K L+IEDLVVLSG HTI
Sbjct: 397 NAGVSWPVKTGRRDGRVSNVSEVLSNIPSPFFNFSQLNAFFAAKGLSIEDLVVLSGGHTI 576
Query: 581 GVSHCSGFA 607
GV C+ F+
Sbjct: 577 GVGLCNFFS 603
Score = 90.4 bits (191), Expect(5) = 1e-066
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +2 / +1
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY TCP+AE+ +++ + + +A L+RMHFHDCFVRGCDGSVL+++ N TAEK
Sbjct: 76 FYKTTCPSAESTIKRVATKYIKKDKTLAAPLLRMHFHDCFVRGCDGSVLLNSTQNNTAEK 255
Query: 263 DAPPN 277
A PN
Sbjct: 256 AAIPN 270
Score = 68.0 bits (142), Expect(5) = 1e-066
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +2 / +1
Query: 278 NPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVP 427
N SLR FDV+D AK+ LE CPGVVSCAD+++ ARD+VV + G P
Sbjct: 268 NLSLRGFDVIDAAKSELEEICPGVVSCADIVSLVARDAVVAANNAGVSWP 417
Score = 40.5 bits (82), Expect(5) = 1e-066
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2 / +1
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVD 883
TTV MD + FD Y L +N GLF SD LLT++T K++ +
Sbjct: 709 TTVPMDPRSSLNFDRHYYRTLESNRGLFLSDAGLLTDSTSKSIAE 843
Score = 36.3 bits (73), Expect(5) = 1e-066
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2 / +1
Query: 635 DRLYNFSSPDGIDPTLSKAYAFLLKSIC 718
+RLYNF+ +DP+L K+YA LK+ C
Sbjct: 604 NRLYNFTGKGDMDPSLDKSYAKELKTKC 687
>gb|CO364127.1|CO364127 RTK1_13_G11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_G11_A029 5', mRNA sequence
Length = 829
Score = 96.4 bits (204), Expect(5) = 2e-066
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 173 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 352
Query: 590 HCSGF 604
HC+ F
Sbjct: 353 HCTSF 367
Score = 81.3 bits (171), Expect(5) = 2e-066
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = +2 / +2
Query: 251 TAEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
TAEKD+ NNPSL FDV+D AK+ LE CP VSCAD+LAFAARDS L+
Sbjct: 2 TAEKDSIVNNPSLHGFDVIDNAKSRLETICPNTVSCADILAFAARDSAKLA 154
Score = 62.9 bits (131), Expect(5) = 2e-066
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = +2 / +2
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDS 886
TTVFMD+ITPE DN Y GL N GLF SD ALLT+ A+VD+
Sbjct: 482 TTVFMDIITPETLDNLYYDGLLNKHGLFTSDAALLTDPNTAAVVDA 619
Score = 49.2 bits (101), Expect(5) = 2e-066
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 905 TFRTKFARSMIKMGQIEVLTGTQGEIRRNCRVINPVSAPDDV 1030
T++ FA +M+ MG I LTG +GEIRR C VIN A DV
Sbjct: 644 TWQQNFAAAMVNMGMIIDLTGNEGEIRRKCSVINSS*AKRDV 769
Score = 39.6 bits (80), Expect(5) = 2e-066
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L YA LLK CP
Sbjct: 368 VTRLYNFSTTIPTDPSLDPKYAALLKEKCP 457
>gb|CX649818.1|CX649818 COLD1_41_E02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_41_E02_A029 5', mRNA sequence
Length = 925
Score = 127 bits (271), Expect(4) = 3e-066
Identities = 55/103 (53%), Positives = 71/103 (68%)
Frame = +2 / +3
Query: 299 DVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISNDTEALNN 478
+ V AKA++EA CP +VSCAD+LA A RD V L+GG Y V GRRDG +S +E N
Sbjct: 351 NTVVAAKAAVEAVCPNLVSCADILALATRDVVGLTGGPSYSVELGRRDGLVSLASEVAAN 530
Query: 479 LPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
+P P + +L D F+ K L+ D++ LSGAHTIGVSHCSGF+
Sbjct: 531 IPAPTLDLDQLNDFFSVKGLSQIDMIALSGAHTIGVSHCSGFS 659
Score = 101 bits (216), Expect(4) = 3e-066
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +2 / +3
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY++TCP ETIV QTV A F++N PA +R+ FHDCFVRGCD SVLID+ TAEK
Sbjct: 132 FYEQTCPNLETIVTQTVTAQFQSNFATGPATLRLLFHDCFVRGCDASVLIDSTSTNTAEK 311
Query: 263 DAPPN 277
DA N
Sbjct: 312 DATEN 326
Score = 46.9 bits (96), Expect(4) = 3e-066
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2 / +3
Query: 608 GPTDLNGPVDRLYNFSSPDGIDPTLSKAYAFLLKSICPAN 727
G + +G +RLYNFSS + +DPTL +YA L+ CP N
Sbjct: 633 GVSHCSGFSNRLYNFSSSNQVDPTLDSSYAAQLQQECPVN 752
Score = 35.0 bits (70), Expect(4) = 3e-066
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2 / +3
Query: 755 VFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKAL 877
V MD TP +FDN Y L ++ GLF SD L T++ L
Sbjct: 771 VSMDPQTPTQFDNVYYQLLQSSEGLFSSDEILFTDSRSSVL 893
>gb|CO365861.1|CO365861 RTK1_19_E01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_19_E01_A029 5', mRNA sequence
Length = 835
Score = 127 bits (271), Expect(4) = 5e-066
Identities = 55/103 (53%), Positives = 71/103 (68%)
Frame = +2 / +1
Query: 299 DVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISNDTEALNN 478
+ V AKA++EA CP +VSCAD+LA A RD V L+GG Y V GRRDG +S +E N
Sbjct: 292 NTVVAAKAAVEAVCPNLVSCADILALATRDVVGLTGGPSYSVELGRRDGLVSLASEVAAN 471
Query: 479 LPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
+P P + +L D F+ K L+ D++ LSGAHTIGVSHCSGF+
Sbjct: 472 IPAPTLDLDQLNDFFSVKGLSQIDMIALSGAHTIGVSHCSGFS 600
Score = 101 bits (216), Expect(4) = 5e-066
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +2 / +1
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY++TCP ETIV QTV A F++N PA +R+ FHDCFVRGCD SVLID+ TAEK
Sbjct: 73 FYEQTCPNLETIVTQTVTAQFQSNFATGPATLRLLFHDCFVRGCDASVLIDSTSTNTAEK 252
Query: 263 DAPPN 277
DA N
Sbjct: 253 DATEN 267
Score = 46.9 bits (96), Expect(4) = 5e-066
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2 / +1
Query: 608 GPTDLNGPVDRLYNFSSPDGIDPTLSKAYAFLLKSICPAN 727
G + +G +RLYNFSS + +DPTL +YA L+ CP N
Sbjct: 574 GVSHCSGFSNRLYNFSSSNQVDPTLDSSYAAQLQQECPVN 693
Score = 34.1 bits (68), Expect(4) = 5e-066
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2 / +1
Query: 755 VFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNA 862
V MD TP +FDN Y L ++ GLF SD L T++
Sbjct: 712 VSMDPQTPTQFDNVYYQLLQSSEGLFSSDEILFTDS 819
>gb|DR683429.1|DR683429 EST1073505 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAH09 3' end, mRNA sequence
Length = 752
Score = 174 bits (375), Expect(2) = 2e-065
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2 / +1
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 178 EVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 357
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
AEKD+ NNPSL FDV+D AK+ LE CP VSCAD++AFAARDS L+
Sbjct: 358 AEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSAKLA 507
Score = 101 bits (216), Expect(2) = 1e-027
Identities = 54/96 (56%), Positives = 61/96 (63%)
Frame = -1 / -1
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 461 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCIL 282
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 281 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KPTSR 174
Score = 96.4 bits (204), Expect(2) = 2e-065
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2 / +1
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 526 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 705
Query: 590 HCSGF 604
HC+ F
Sbjct: 706 HCTSF 720
Score = 42.8 bits (87), Expect(2) = 1e-027
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1 / -1
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G +R S + +I
Sbjct: 713 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVRTSEASEI 564
>gb|CO167718.1|CO167718 FLD1_70_E12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_70_E12_A029 5', mRNA sequence
Length = 716
Score = 174 bits (375), Expect(2) = 2e-065
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2 / +3
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 147 EVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 326
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
AEKD+ NNPSL FDV+D AK+ LE CP VSCAD++AFAARDS L+
Sbjct: 327 AEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSAKLA 476
Score = 101 bits (216), Expect(2) = 1e-027
Identities = 54/96 (56%), Positives = 61/96 (63%)
Frame = -1 / -2
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL SFSAV L S+ TEPS PLTKQSWKC+
Sbjct: 430 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPLTKQSWKCIL 251
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 250 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KPTSR 143
Score = 96.4 bits (204), Expect(2) = 2e-065
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2 / +3
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 495 LGWNVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 674
Query: 590 HCSGF 604
HC+ F
Sbjct: 675 HCTSF 689
Score = 42.8 bits (87), Expect(2) = 1e-027
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1 / -2
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G +R S + +I
Sbjct: 682 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVRTSEASEI 533
>gb|CF672738.1|CF672738 RTCNT1_73_D06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_73_D06_A029 5', mRNA sequence
Length = 692
Score = 174 bits (375), Expect(2) = 2e-065
Identities = 72/110 (65%), Positives = 84/110 (76%)
Frame = +2 / +2
Query: 74 DVGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLT 253
+VGFYD +CP AE+ V + V AF N+ VAP LIRMHFHDCFVRGCDGSVLID+ N T
Sbjct: 119 EVGFYDYSCPKAESTVFEVVRDAFLNSREVAPGLIRMHFHDCFVRGCDGSVLIDSTANNT 298
Query: 254 AEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLS 403
AEKD+ NNPSL FDV+D AK+ LE CP VSCAD++AFAARDS L+
Sbjct: 299 AEKDSIVNNPSLHGFDVIDTAKSRLETICPNTVSCADIVAFAARDSAKLA 448
Score = 99.1 bits (210), Expect(2) = 6e-027
Identities = 53/96 (55%), Positives = 60/96 (62%)
Frame = -1 / -3
Query: 357 QETTPGH*ASSDALARSTTSKNRRLGLLGGASFSAVRLPTVSISTEPSQPLTKQSWKCMR 178
QET G S+ A S TS RLGLL SFSAV L S+ TEPS P TKQSWKC+
Sbjct: 402 QETVFGQMVSNLDFAVSITSNP*RLGLLTILSFSAVLLAVESMRTEPSHPRTKQSWKCIL 223
Query: 177 ISAGATPELFLNAAATVCCTMVSAVGHVLS*KPTSR 70
+S GAT LF NA+ T T+ SA G + S*KPTSR
Sbjct: 222 MSPGATSRLFRNASLTTSNTVDSAFGQL*S*KPTSR 115
Score = 96.4 bits (204), Expect(2) = 2e-065
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2 / +2
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
LG+ VP GRRDG IS +E L N+P P FN ++L FASK L+ +D+V+LSGAH+IGVS
Sbjct: 467 LGWDVPAGRRDGIISLASEVLTNIPAPTFNVSQLTQSFASKGLSQKDMVILSGAHSIGVS 646
Query: 590 HCSGF 604
HC+ F
Sbjct: 647 HCTSF 661
Score = 42.8 bits (87), Expect(2) = 6e-027
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -1 / -3
Query: 597 LQCETPMVCAPESTTRSSIVRFLEANLSASSVALKNGGGRLLRASVSLDI 448
+Q ETP+ CAPES T S R L+A L + + LK G G +R S + +I
Sbjct: 654 VQ*ETPIECAPESITMSFWDRPLDAKLCVNWLTLKVGAGIFVRTSEASEI 505
>gb|DR109614.1|DR109614 RTS1_3_B07.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_3_B07_A029 5', mRNA sequence
Length = 766
Score = 121 bits (259), Expect(4) = 2e-064
Identities = 53/103 (51%), Positives = 70/103 (67%)
Frame = +2 / +2
Query: 299 DVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISNDTEALNN 478
+ V A+A++EA CP +VSCAD+LA A RD V L+GG Y V GRRDG +S +E N
Sbjct: 224 NTVVAAEAAVEAVCPNLVSCADILALATRDVVGLTGGPSYSVELGRRDGLVSLASEVAAN 403
Query: 479 LPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
+P P + +L D F+ K L+ D++ LS AHTIGVSHCSGF+
Sbjct: 404 IPAPTLDLDQLNDFFSVKGLSQIDMIALSRAHTIGVSHCSGFS 532
Score = 101 bits (216), Expect(4) = 2e-064
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +2 / +2
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY++TCP ETIV QTV A F++N PA +R+ FHDCFVRGCD SVLID+ TAEK
Sbjct: 5 FYEQTCPNLETIVTQTVTAQFQSNFATGPATLRLLFHDCFVRGCDASVLIDSTSTNTAEK 184
Query: 263 DAPPN 277
DA N
Sbjct: 185 DATEN 199
Score = 46.9 bits (96), Expect(4) = 2e-064
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2 / +2
Query: 608 GPTDLNGPVDRLYNFSSPDGIDPTLSKAYAFLLKSICPAN 727
G + +G +RLYNFSS + +DPTL +YA L+ CP N
Sbjct: 506 GVSHCSGFSNRLYNFSSSNQVDPTLDSSYAAQLQQECPVN 625
Score = 34.1 bits (68), Expect(4) = 2e-064
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2 / +2
Query: 755 VFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNA 862
V MD TP +FDN Y L ++ GLF SD L T++
Sbjct: 644 VSMDPQTPTQFDNVYYQLLQSSEGLFSSDEILFTDS 751
>gb|DT634196.1|DT634196 EST1149127 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG334 3' end, mRNA sequence
Length = 937
Score = 160 bits (344), Expect(4) = 4e-064
Identities = 66/110 (60%), Positives = 85/110 (77%)
Frame = +2 / +1
Query: 278 NPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISN 457
N ++R F+V+D KA +E +CPGVVSCAD++A AARD+V GG +QV GRRDGRIS
Sbjct: 403 NLTVRGFEVIDHVKAQIEDKCPGVVSCADIVALAARDAVFARGGPFWQVKTGRRDGRISV 582
Query: 458 DTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
++EAL+N+P P FN +L D FA K L ++DLVVLSGAHTIG+SHCS F+
Sbjct: 583 ESEALSNIPAPTFNFQQLKDSFARKGLNVQDLVVLSGAHTIGMSHCSFFS 732
Score = 83.1 bits (175), Expect(4) = 4e-064
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2 / +1
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY ++CP E +V+Q V + +A +L+R+HFHDCFVRGCD S+L+++ N AEK
Sbjct: 211 FYIKSCPGVEGLVRQLVNKYIAADHTIAASLLRLHFHDCFVRGCDASLLLNSTQNNRAEK 390
Query: 263 DAPPN 277
DA PN
Sbjct: 391 DAIPN 405
Score = 36.8 bits (74), Expect(4) = 4e-064
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2 / +1
Query: 635 DRLYNFSSPDGIDPTLSKAYAFLLKSIC 718
+RLY F G+DPTL YA LLK C
Sbjct: 733 NRLYTFGRSGGMDPTLESLYAQLLKMQC 816
Score = 23.1 bits (44), Expect(4) = 4e-064
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2 / +1
Query: 755 VFMDLITPERFDNK*YVGLTNNLGLFKSDVA 847
V MD + FD+ + L N GLF+SD A
Sbjct: 844 VEMDPGSSLAFDSHYFGNLELNRGLFQSDAA 936
>gb|DR682788.1|DR682788 EST1072863 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC22 3' end, mRNA sequence
Length = 775
Score = 159 bits (342), Expect(4) = 4e-064
Identities = 66/110 (60%), Positives = 85/110 (77%)
Frame = +2 / +2
Query: 278 NPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISN 457
N ++R F+V+D KA +E +CPGVVSCAD++A AARD+ GG +QV GRRDGRIS
Sbjct: 242 NLTVRGFEVIDHVKAQIEDKCPGVVSCADIVALAARDAGFARGGPFWQVKTGRRDGRISV 421
Query: 458 DTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
++EAL+N+P P FN +L D FASK L ++DLVVLSGAHTIG+SHCS F+
Sbjct: 422 ESEALSNIPAPTFNFQQLKDSFASKGLNVQDLVVLSGAHTIGMSHCSFFS 571
Score = 83.5 bits (176), Expect(4) = 4e-064
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2 / +2
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY ++CP E +V+Q V + +A +L+R+HFHDCFVRGCD S+L+++ N AEK
Sbjct: 50 FYMKSCPGVEGLVRQVVNKYIAADHTIAASLLRLHFHDCFVRGCDASLLLNSTQNNRAEK 229
Query: 263 DAPPN 277
DA PN
Sbjct: 230 DAIPN 244
Score = 37.3 bits (75), Expect(4) = 4e-064
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 635 DRLYNFSSPDGIDPTLSKAYAFLLKSIC 718
+RLY+F G+DPTL YA LLK C
Sbjct: 572 NRLYSFGRSGGMDPTLENLYAQLLKMQC 655
Score = 23.1 bits (44), Expect(4) = 4e-064
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2 / +2
Query: 755 VFMDLITPERFDNK*YVGLTNNLGLFKSDVA 847
V MD + FD+ + L N GLF+SD A
Sbjct: 683 VEMDPGSSLAFDSHYFGNLELNRGLFQSDAA 775
>gb|AL751293.1|AL751293 AL751293 RS Pinus pinaster cDNA clone RS07B11 similar to
PEROXIDASE, mRNA sequence
Length = 706
Score = 132 bits (282), Expect(5) = 2e-063
Identities = 53/78 (67%), Positives = 60/78 (76%)
Frame = +2 / +3
Query: 185 HFHDCFVRGCDGSVLIDTVGNLTAEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCAD 364
HFHDCFVRGCDGSVLID+ TAEKD+P NNPSL FDV+D AK+ LEA CP VSCAD
Sbjct: 3 HFHDCFVRGCDGSVLIDSTAKNTAEKDSPVNNPSLHGFDVIDTAKSRLEAICPNTVSCAD 182
Query: 365 VLAFAARDSVVLSGGLGY 418
++AFAARDS L+ Y
Sbjct: 183 IVAFAARDSTKLASPYHY 236
Score = 71.6 bits (150), Expect(5) = 2e-063
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +2 / +3
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSG 568
LG+ VP GRRDG IS +E N+P P FN ++L RFASK L+ +D+V+LSG
Sbjct: 240 LGWDVPAGRRDGIISLASEVATNIPAPTFNVSQLTQRFASKGLSQKDMVILSG 398
Score = 54.2 bits (112), Expect(5) = 2e-063
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALV 880
TTVFMD TPE DN Y GL N GLF SD LLT+ +++V
Sbjct: 545 TTVFMDTYTPETIDNLYYKGLLNKHGLFTSDXTLLTDRNXRSVV 676
Score = 35.0 bits (70), Expect(5) = 2e-063
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L A +LK CP
Sbjct: 434 VSRLYNFSATIPTDPSLDPMLADILKKKCP 523
Score = 26.3 bits (51), Expect(5) = 2e-063
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 572 HTIGVSHCSGF 604
H+IGVSHC+ F
Sbjct: 401 HSIGVSHCTSF 433
>gb|CO165064.1|CO165064 FLD1_52_D01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_D01_A029 3', mRNA sequence
Length = 912
Score = 138 bits (295), Expect(4) = 5e-063
Identities = 60/107 (56%), Positives = 75/107 (70%)
Frame = +2 / -1
Query: 278 NPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISN 457
N +L FDV+D K++LE CPGVVSCAD+LA AARD+V+ SGG + V GRRDG S
Sbjct: 756 NLTLSQFDVIDEIKSNLEKACPGVVSCADILALAARDAVLQSGGPTWAVEMGRRDGLTSR 577
Query: 458 DTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCS 598
++A+++LP NA L D F+S L+I DLV LSGAHT G SHCS
Sbjct: 576 SSDAISHLPSSRSNAQALIDSFSSNGLSIRDLVTLSGAHTFGKSHCS 436
Score = 87.2 bits (184), Expect(4) = 5e-063
Identities = 36/91 (39%), Positives = 55/91 (60%)
Frame = +2 / -1
Query: 746 NTTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDSFVRSEATFRTKFA 925
N T+ +D TP FD + L N G+F SD AL+ ++ K V + E +FR +F
Sbjct: 327 NATIPLDPSTPNIFDKNYFQDLLQNEGIFASDSALVIDSRTKVFVTEYANDEDSFRDQFG 148
Query: 926 RSMIKMGQIEVLTGTQGEIRRNCRVINPVSA 1018
+MI++G++++LTG QGEIR+ C +N SA
Sbjct: 147 YAMIRLGRVQILTGQQGEIRKRCGFVNSNSA 55
Score = 46.9 bits (96), Expect(4) = 5e-063
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2 / -1
Query: 146 RNNSGVAPALIRMHFHDCFVRGCDGSVLI 232
+ ++ + ++RM FHDCFVRGCD SVL+
Sbjct: 882 KQDNTIGAPIVRMFFHDCFVRGCDASVLL 796
Score = 27.6 bits (54), Expect(4) = 5e-063
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 665 GIDPTLSKAYAFLLKSIC 718
GIDPTL+K YA L + C
Sbjct: 399 GIDPTLNKTYAVGLMNQC 346
>gb|AL751213.1|AL751213 AL751213 RS Pinus pinaster cDNA clone RS06C12 similar to
PEROXIDASE, mRNA sequence
Length = 709
Score = 132 bits (282), Expect(5) = 8e-063
Identities = 53/78 (67%), Positives = 60/78 (76%)
Frame = +2 / +3
Query: 185 HFHDCFVRGCDGSVLIDTVGNLTAEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCAD 364
HFHDCFVRGCDGSVLID+ TAEKD+P NNPSL FDV+D AK+ LEA CP VSCAD
Sbjct: 3 HFHDCFVRGCDGSVLIDSTAKNTAEKDSPVNNPSLHGFDVIDTAKSRLEAICPNTVSCAD 182
Query: 365 VLAFAARDSVVLSGGLGY 418
++AFAARDS L+ Y
Sbjct: 183 IVAFAARDSTKLASPYHY 236
Score = 71.6 bits (150), Expect(5) = 8e-063
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +2 / +3
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSG 568
LG+ VP GRRDG IS +E N+P P FN ++L RFASK L+ +D+V+LSG
Sbjct: 240 LGWDVPAGRRDGIISLASEVATNIPAPTFNVSQLTQRFASKGLSQKDMVILSG 398
Score = 54.7 bits (113), Expect(5) = 8e-063
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 749 TTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALV 880
TTVFMD TPE DN Y GL NN+ LF SD LLT+ ++V
Sbjct: 545 TTVFMDTYTPETIDNLYYKGLLNNMXLFTSDXTLLTDRNTASVV 676
Score = 32.2 bits (64), Expect(5) = 8e-063
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2 / +2
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICP 721
V RLYNFS+ DP+L A +L CP
Sbjct: 434 VSRLYNFSATIPTDPSLDPMLADILXKKCP 523
Score = 26.3 bits (51), Expect(5) = 8e-063
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 572 HTIGVSHCSGF 604
H+IGVSHC+ F
Sbjct: 401 HSIGVSHCTSF 433
>gb|DT633972.1|DT633972 EST1148903 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG076 3' end, mRNA sequence
Length = 820
Score = 160 bits (344), Expect(3) = 1e-062
Identities = 66/110 (60%), Positives = 85/110 (77%)
Frame = +2 / +2
Query: 278 NPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISN 457
N ++R F+V+D KA +E +CPGVVSCAD++A AARD+V GG +QV GRRDGRIS
Sbjct: 407 NLTVRGFEVIDHVKAQIEDKCPGVVSCADIVALAARDAVFARGGPFWQVKTGRRDGRISV 586
Query: 458 DTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
++EAL+N+P P FN +L D FA K L ++DLVVLSGAHTIG+SHCS F+
Sbjct: 587 ESEALSNIPAPTFNFQQLKDSFARKGLNVQDLVVLSGAHTIGMSHCSFFS 736
Score = 83.1 bits (175), Expect(3) = 1e-062
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2 / +2
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY ++CP E +V+Q V + +A +L+R+HFHDCFVRGCD S+L+++ N AEK
Sbjct: 215 FYIKSCPGVEGLVRQLVNKYIAADHTIAASLLRLHFHDCFVRGCDASLLLNSTQNNRAEK 394
Query: 263 DAPPN 277
DA PN
Sbjct: 395 DAIPN 409
Score = 36.8 bits (74), Expect(3) = 1e-062
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 635 DRLYNFSSPDGIDPTLSKAYAFLLKSIC 718
+RLY F G+DPTL YA LLK C
Sbjct: 737 NRLYTFGRSGGMDPTLESLYAQLLKMQC 820
>gb|BX678783.1|BX678783 BX678783 RS Pinus pinaster cDNA clone RS15A09, mRNA sequence
Length = 605
Score = 133 bits (285), Expect(4) = 1e-062
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2 / +1
Query: 185 HFHDCFVRGCDGSVLIDTVGNLTAEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCAD 364
HFHDCFVRGCDGS+LID+ AEKD+P NNPSL FDV+DRAK+ LEA CP VSCAD
Sbjct: 1 HFHDCFVRGCDGSILIDSTATNIAEKDSPVNNPSLHGFDVIDRAKSRLEAMCPNTVSCAD 180
Query: 365 VLAFAARDSVVLS 403
+LAFAARDS L+
Sbjct: 181 ILAFAARDSAKLA 219
Score = 92.7 bits (196), Expect(4) = 1e-062
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +2 / +1
Query: 410 LGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVS 589
L + VP GRRDG IS +E L N+P P FN ++L FA+K L+ E++++LSGAH+IGVS
Sbjct: 238 LSWDVPAGRRDGIISLASEVLTNIPAPTFNLSQLTQSFAAKGLSQEEMIILSGAHSIGVS 417
Query: 590 HCSGF 604
HCS F
Sbjct: 418 HCSSF 432
Score = 41.4 bits (84), Expect(4) = 1e-062
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICPANTSQ 736
V RLYNFSS DP++ YA LLK CP + Q
Sbjct: 433 VTRLYNFSSTIQTDPSIDPQYAGLLKEKCPQGSPQ 537
Score = 30.9 bits (61), Expect(4) = 1e-062
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / +2
Query: 749 TTVFMDLITPERFDNK*Y 802
TTVFM++ITPE DN Y
Sbjct: 548 TTVFMNIITPETLDNLYY 601
>gb|DR163369.1|DR163369 RTFE1_42_B11.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_42_B11_A029 5', mRNA sequence
Length = 871
Score = 181 bits (390), Expect(2) = 6e-062
Identities = 76/162 (46%), Positives = 106/162 (65%)
Frame = +2 / +1
Query: 170 ALIRMHFHDCFVRGCDGSVLIDTVGNLTAEKDAPPNNPSLRFFDVVDRAKASLEAQCPGV 349
+L+R+HFHDCFV GCDGSVL+D +T EK A PN S R FDV+D K+++E C GV
Sbjct: 13 SLLRLHFHDCFVNGCDGSVLLDDSSTITGEKTAIPNANSARGFDVIDAIKSNVEKACSGV 192
Query: 350 VSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFAS 529
VSCAD+LA AARDSVV GG + V GRRD ++ + A NN+PPP + ++L F +
Sbjct: 193 VSCADILAIAARDSVVELGGPSWTVMLGRRDSTTASKSGANNNIPPPTSSLSKLISLFQA 372
Query: 530 KNLTIEDLVVLSGAHTIGVSHCSGFAGPTDLNGPVDRLYNFS 655
+ L+ +++V L+G HTIG + C F + +D +Y+ S
Sbjct: 373 QGLSAKEMVALAGGHTIGQAQCKNFRAHIYNDTNIDTMYSTS 498
Score = 77.6 bits (163), Expect(2) = 6e-062
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +2 / +1
Query: 761 MDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDSFVRSEATFRTKFARSMIK 940
+D +TP FD Y L + GL SD L + + V ++ ++ TF + FA +MIK
Sbjct: 553 LDYMTPTVFDKNYYSNLKSKKGLLHSDQELFNGGSTDSQVSTYASNQNTFFSDFAAAMIK 732
Query: 941 MGQIEVLTGTQGEIRRNCRVIN 1006
MG I+ LTGT G+IR+NCR N
Sbjct: 733 MGNIKPLTGTSGQIRKNCRKPN 798
>gb|CF671723.1|CF671723 RTCNT1_58_H03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_58_H03_A029 5', mRNA sequence
Length = 794
Score = 127 bits (271), Expect(3) = 3e-061
Identities = 55/103 (53%), Positives = 71/103 (68%)
Frame = +2 / +2
Query: 299 DVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISNDTEALNN 478
+ V AKA++EA CP +VSCAD+LA A RD V L+GG Y V GRRDG +S +E N
Sbjct: 308 NTVVAAKAAVEAVCPNLVSCADILALATRDVVGLTGGPSYSVELGRRDGLVSLASEVAAN 487
Query: 479 LPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
+P P + +L D F+ K L+ D++ LSGAHTIGVSHCSGF+
Sbjct: 488 IPAPTLDLDQLNDFFSVKGLSQIDMIALSGAHTIGVSHCSGFS 616
Score = 101 bits (216), Expect(3) = 3e-061
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +2 / +2
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY++TCP ETIV QTV A F++N PA +R+ FHDCFVRGCD SVLID+ TAEK
Sbjct: 89 FYEQTCPNLETIVTQTVTAQFQSNFATGPATLRLLFHDCFVRGCDASVLIDSTSTNTAEK 268
Query: 263 DAPPN 277
DA N
Sbjct: 269 DATEN 283
Score = 46.9 bits (96), Expect(3) = 3e-061
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2 / +2
Query: 608 GPTDLNGPVDRLYNFSSPDGIDPTLSKAYAFLLKSICPAN 727
G + +G +RLYNFSS + +DPTL +YA L+ CP N
Sbjct: 590 GVSHCSGFSNRLYNFSSSNQVDPTLDSSYAAQLQQDCPVN 709
>gb|DR181212.1|DR181212 RTMNUT1_37_B09.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_37_B09_A029 5', mRNA sequence
Length = 777
Score = 127 bits (271), Expect(3) = 3e-061
Identities = 55/103 (53%), Positives = 71/103 (68%)
Frame = +2 / +3
Query: 299 DVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISNDTEALNN 478
+ V AKA++EA CP +VSCAD+LA A RD V L+GG Y V GRRDG +S +E N
Sbjct: 291 NTVVAAKAAVEAVCPNLVSCADILALATRDVVGLTGGPSYSVELGRRDGLVSLASEVAAN 470
Query: 479 LPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
+P P + +L D F+ K L+ D++ LSGAHTIGVSHCSGF+
Sbjct: 471 IPAPTLDLDQLNDFFSVKGLSQIDMIALSGAHTIGVSHCSGFS 599
Score = 101 bits (216), Expect(3) = 3e-061
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +2 / +3
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY++TCP ETIV QTV A F++N PA +R+ FHDCFVRGCD SVLID+ TAEK
Sbjct: 72 FYEQTCPNLETIVTQTVTAQFQSNFATGPATLRLLFHDCFVRGCDASVLIDSTSTNTAEK 251
Query: 263 DAPPN 277
DA N
Sbjct: 252 DATEN 266
Score = 46.9 bits (96), Expect(3) = 3e-061
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2 / +3
Query: 608 GPTDLNGPVDRLYNFSSPDGIDPTLSKAYAFLLKSICPAN 727
G + +G +RLYNFSS + +DPTL +YA L+ CP N
Sbjct: 573 GVSHCSGFSNRLYNFSSSNQVDPTLDSSYAAQLQQECPVN 692
>gb|DR744995.1|DR744995 RTCU1_26_G03.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_26_G03_A029 3', mRNA sequence
Length = 742
Score = 127 bits (271), Expect(3) = 3e-061
Identities = 55/103 (53%), Positives = 71/103 (68%)
Frame = +2 / -3
Query: 299 DVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISNDTEALNN 478
+ V AKA++EA CP +VSCAD+LA A RD V L+GG Y V GRRDG +S +E N
Sbjct: 404 NTVVAAKAAVEAVCPNLVSCADILALATRDVVGLTGGPSYSVELGRRDGLVSLASEVAAN 225
Query: 479 LPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
+P P + +L D F+ K L+ D++ LSGAHTIGVSHCSGF+
Sbjct: 224 IPAPTLDLDQLNDFFSVKGLSQIDMIALSGAHTIGVSHCSGFS 96
Score = 101 bits (216), Expect(3) = 3e-061
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +2 / -3
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY++TCP ETIV QTV A F++N PA +R+ FHDCFVRGCD SVLID+ TAEK
Sbjct: 623 FYEQTCPNLETIVTQTVTAQFQSNFATGPATLRLLFHDCFVRGCDASVLIDSTSTNTAEK 444
Query: 263 DAPPN 277
DA N
Sbjct: 443 DATEN 429
Score = 46.9 bits (96), Expect(3) = 3e-061
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2 / -3
Query: 608 GPTDLNGPVDRLYNFSSPDGIDPTLSKAYAFLLKSICPAN 727
G + +G +RLYNFSS + +DPTL +YA L+ CP N
Sbjct: 122 GVSHCSGFSNRLYNFSSSNQVDPTLDSSYAAQLQQDCPVN 3
>gb|CF665923.1|CF665923 RTCNT1_19_A06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_19_A06_A029 5', mRNA sequence
Length = 720
Score = 127 bits (271), Expect(3) = 3e-061
Identities = 55/103 (53%), Positives = 71/103 (68%)
Frame = +2 / +3
Query: 299 DVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISNDTEALNN 478
+ V AKA++EA CP +VSCAD+LA A RD V L+GG Y V GRRDG +S +E N
Sbjct: 276 NTVVAAKAAVEAVCPNLVSCADILALATRDVVGLTGGPSYSVELGRRDGLVSLASEVAAN 455
Query: 479 LPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
+P P + +L D F+ K L+ D++ LSGAHTIGVSHCSGF+
Sbjct: 456 IPAPTLDLDQLNDFFSVKGLSQIDMIALSGAHTIGVSHCSGFS 584
Score = 101 bits (216), Expect(3) = 3e-061
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +2 / +3
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY++TCP ETIV QTV A F++N PA +R+ FHDCFVRGCD SVLID+ TAEK
Sbjct: 57 FYEQTCPNLETIVTQTVTAQFQSNFATGPATLRLLFHDCFVRGCDASVLIDSTSTNTAEK 236
Query: 263 DAPPN 277
DA N
Sbjct: 237 DATEN 251
Score = 46.9 bits (96), Expect(3) = 3e-061
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2 / +3
Query: 608 GPTDLNGPVDRLYNFSSPDGIDPTLSKAYAFLLKSICPAN 727
G + +G +RLYNFSS + +DPTL +YA L+ CP N
Sbjct: 558 GVSHCSGFSNRLYNFSSSNQVDPTLDSSYAAQLQQDCPVN 677
>dbj|BD224556.1| Materials and methods for the modification of plant lignin content
Length = 1224
Score = 188 bits (405), Expect(2) = 5e-061
Identities = 81/174 (46%), Positives = 107/174 (61%)
Frame = +2 / +2
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY ++CP +IV+ V A + +L+R+HFHDCFV GCDGS+L+D T EK
Sbjct: 146 FYAKSCPRLPSIVKSVVKQAVAKEKRMGASLVRLHFHDCFVNGCDGSILLDDNATFTGEK 325
Query: 263 DAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRD 442
A PN S R F+V+D K +EA C GVVSCAD+L AARDS+V G + V GRRD
Sbjct: 326 TAGPNANSARGFEVIDSIKTQVEAACSGVVSCADILTIAARDSIVELQGPTWTVMLGRRD 505
Query: 443 GRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGF 604
++ + A NN+P P + + L F + L+ +DLV LSGAHTIG S C+ F
Sbjct: 506 STTASLSAANNNIPSPASSLSTLISSFQAHGLSTKDLVALSGAHTIGQSRCAFF 667
Score = 71.6 bits (150), Expect(2) = 5e-061
Identities = 32/82 (39%), Positives = 45/82 (54%)
Frame = +2 / +2
Query: 761 MDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDSFVRSEATFRTKFARSMIK 940
+D +T FDNK Y L GL SD L + + V ++ ++ +F F +M+K
Sbjct: 767 LDAVTSITFDNKYYSNLKIQKGLLHSDQQLFNGGSTDSQVTAYSSNQNSFFIDFTAAMVK 946
Query: 941 MGQIEVLTGTQGEIRRNCRVIN 1006
MG I LTGT G+IR+NCR N
Sbjct: 947 MGNISPLTGTNGQIRKNCRKSN 1012
>gb|DR092596.1|DR092596 STRR1_2_A03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_2_A03_A033 5', mRNA sequence
Length = 866
Score = 151 bits (325), Expect(4) = 7e-061
Identities = 66/132 (50%), Positives = 85/132 (64%)
Frame = +2 / +1
Query: 209 GCDGSVLIDTVGNLTAEKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARD 388
GCDGSVL+D N T EK A PNN SLR FDVVD K+++E+ C VSCAD+LA AA
Sbjct: 16 GCDGSVLLDDTANFTGEKTAGPNNNSLRGFDVVDNIKSAVESACNATVSCADILAIAAEQ 195
Query: 389 SVVLSGGLGYQVPGGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSG 568
SVVLSGG + + GRRD +N T +P P N + + +F + L++ D+V LSG
Sbjct: 196 SVVLSGGPSWTIQLGRRDSTTANATLPNTAIPAPTDNLSVITTKFQNVGLSLTDVVALSG 375
Query: 569 AHTIGVSHCSGF 604
AHTIG + C+ F
Sbjct: 376 AHTIGRARCTVF 411
Score = 59.3 bits (123), Expect(4) = 7e-061
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +2 / +1
Query: 854 TNATMKALVDSFVRSEATFRTKFARSMIKMGQIEVLTGTQGEIRRNCRVIN 1006
T A+ ++V+ + S+ F + F+ SMI MG I LTGT GEIR NCR +N
Sbjct: 631 TGASTISIVNDYTSSQTDFFSNFSNSMINMGNISPLTGTSGEIRLNCRKVN 783
Score = 42.3 bits (86), Expect(4) = 7e-061
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2 / +1
Query: 632 VDRLYNFSSPDGIDPTLSKAYAFLLKSICPAN 727
+ RLYNFS DPTL+ +Y L+S CP N
Sbjct: 412 ISRLYNFSGTGNPDPTLNSSYLSTLQSTCPLN 507
Score = 39.1 bits (79), Expect(4) = 7e-061
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2 / +1
Query: 761 MDLITPERFDNK*YVGLTNNLGLFKSDVALL 853
+D TP FDN Y+ L N +GLF+SD LL
Sbjct: 532 LDPGTPNTFDNNYYINLQNEMGLFQSDQELL 624
>gb|DR682208.1|DR682208 EST1072283 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA827 3' end, mRNA sequence
Length = 789
Score = 159 bits (342), Expect(3) = 1e-060
Identities = 66/110 (60%), Positives = 85/110 (77%)
Frame = +2 / +2
Query: 278 NPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISN 457
N ++R F+V+D KA +E +CPGVVSCAD++A AARD+ GG +QV GRRDGRIS
Sbjct: 395 NLTVRGFEVIDHVKAQIEDKCPGVVSCADIVALAARDAGFARGGPFWQVKTGRRDGRISV 574
Query: 458 DTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
++EAL+N+P P FN +L D FASK L ++DLVVLSGAHTIG+SHCS F+
Sbjct: 575 ESEALSNIPAPTFNFQQLKDSFASKGLNVQDLVVLSGAHTIGMSHCSFFS 724
Score = 83.5 bits (176), Expect(3) = 1e-060
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2 / +2
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEK 262
FY ++CP E +V+Q V + +A +L+R+HFHDCFVRGCD S+L+++ N AEK
Sbjct: 203 FYMKSCPGVEGLVRQVVNKYIAADHTIAASLLRLHFHDCFVRGCDASLLLNSTQNNRAEK 382
Query: 263 DAPPN 277
DA PN
Sbjct: 383 DAIPN 397
Score = 30.4 bits (60), Expect(3) = 1e-060
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 635 DRLYNFSSPDGIDPTLSKAYA 697
+RLY+F G+DPTL YA
Sbjct: 725 NRLYSFGRSGGMDPTLENLYA 787
>gb|CF663228.1|CF663228 RTCNT1_1_C11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_1_C11_A029 5', mRNA sequence
Length = 824
Score = 152 bits (326), Expect(4) = 2e-060
Identities = 64/110 (58%), Positives = 79/110 (71%)
Frame = +2 / +1
Query: 278 NPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISN 457
N SLR F ++D KA++E CPGVVSCAD+LA ARD+V + GG + VP GRRDG +S
Sbjct: 304 NQSLRGFQIIDTVKAAVEKVCPGVVSCADILALVARDAVHMLGGPFWNVPTGRRDGVVSI 483
Query: 458 DTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGFA 607
EAL LPPP N ++L FAS L ++DLVVLSGAHTIG+SHCS F+
Sbjct: 484 KKEALAKLPPPTVNFSQLTSIFASNGLDVKDLVVLSGAHTIGISHCSSFS 633
Score = 77.1 bits (162), Expect(4) = 2e-060
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +2 / +3
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
+ FY++TCP V V N +A L+R+HFHDCFVRGCDGSVL+++ + +
Sbjct: 105 LNFYEKTCPGVNNAVTNVVGQYISKNPTLAAPLLRLHFHDCFVRGCDGSVLLNSTNSTXS 284
Query: 257 EKDAPPNNPSLR 292
K + S R
Sbjct: 285 RKGCASESESER 320
Score = 35.0 bits (70), Expect(4) = 2e-060
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2 / +1
Query: 635 DRLYNFSSPDGIDPTLSKAYAFLLKSIC 718
+RLYNF+ +DP+L+K YA LK C
Sbjct: 634 NRLYNFTGKGDMDPSLNKHYAAKLKLQC 717
Score = 26.7 bits (52), Expect(4) = 2e-060
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2 / +1
Query: 740 FPNTTVFMDLITPERFDNK*YVGLTNNLGLFK 835
+ NTTV MD + FD Y L + GLF+
Sbjct: 727 YKNTTVEMDPGSFRTFDKHYYTNLMKHKGLFQ 822
>gb|CO161327.1|CO161327 FLD1_28_C11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_28_C11_A029 3', mRNA sequence
Length = 812
Score = 148 bits (318), Expect(3) = 4e-060
Identities = 64/109 (58%), Positives = 78/109 (71%)
Frame = +2 / -2
Query: 278 NPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRISN 457
N SLR F V+D AKA++E CPGVVSCAD++A ARD V + GG + VP GRRDG +S
Sbjct: 442 NLSLRGFQVIDAAKAAVEKICPGVVSCADIVALVARDGVHMLGGPFWTVPTGRRDGVVSI 263
Query: 458 DTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGF 604
+ EAL LP P N ++L FAS L ++DLVVLSGAHTIGVSHC+ F
Sbjct: 262 ENEALTKLPAPTANFSQLTSIFASNGLDVQDLVVLSGAHTIGVSHCTSF 116
Score = 91.8 bits (194), Expect(3) = 4e-060
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +2 / -2
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
+ FYD+TCP A + V+ V +A L+RMHFHDCFVRGCDGSVL+++ + A
Sbjct: 640 LNFYDKTCPAAYSAVENVVGEYISKAPSLAAPLLRMHFHDCFVRGCDGSVLLNSTNSTKA 461
Query: 257 EKDAPPN 277
EKDA PN
Sbjct: 460 EKDAFPN 440
Score = 31.3 bits (62), Expect(3) = 4e-060
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2 / -2
Query: 635 DRLYNFSSPDGIDPTLSKAYAFLLKSIC 718
+RLY F+ +DP+L K YA LK C
Sbjct: 112 NRLYRFTGKGDMDPSLDKYYAAHLKIKC 29
>gb|DR017778.1|DR017778 STRS1_18_A05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_A05_A034 5', mRNA sequence
Length = 702
Score = 232 bits (501), Expect = 4e-060
Identities = 95/160 (59%), Positives = 117/160 (73%)
Frame = +2 / +2
Query: 77 VGFYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTA 256
VG+Y CP AE IV VA A N GVAPALIRMHFHDCFVRGCDGS+LID+ A
Sbjct: 218 VGYYRDRCPEAEAIVGAAVAKAVTANPGVAPALIRMHFHDCFVRGCDGSILIDSTAGNQA 397
Query: 257 EKDAPPNNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGR 436
EK++P NNPSL F+++D AK+ LE +CP VVSCAD+LAFAARDS +GGL ++VP GR
Sbjct: 398 EKESPANNPSLHGFEIIDEAKSILEDKCPNVVSCADILAFAARDSAHQAGGLIWEVPAGR 577
Query: 437 RDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLV 556
RDGRIS ++ N+P P FN +L FA+K L++ED+V
Sbjct: 578 RDGRISRASDIPGNIPAPQFNVNQLTQNFAAKFLSVEDMV 697
>gb|CF401192.1|CF401192 RTWW1_10_H07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_10_H07_A015 5', mRNA sequence
Length = 799
Score = 196 bits (422), Expect(2) = 5e-060
Identities = 86/170 (50%), Positives = 110/170 (64%)
Frame = +2 / +2
Query: 95 TCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLIDTVGNLTAEKDAPP 274
+CPTA +IV V A + + +L+R+HFHDCFV+GCDGS+L+D T EK A
Sbjct: 5 SCPTALSIVNAAVKNAVASEKRMGASLLRLHFHDCFVQGCDGSILLDDNSTFTGEKTAGA 184
Query: 275 NNPSLRFFDVVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRDGRIS 454
N S+R FDVVD K +LEA C GVVSCAD+LA AARDSVV GG Y V GRRD +
Sbjct: 185 NANSVRGFDVVDTIKTNLEAACSGVVSCADILAIAARDSVVALGGRSYTVQLGRRDSTTA 364
Query: 455 NDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGF 604
+ + A +NLP P + + L F + L+ +DLV LSGAHTIG + C+ F
Sbjct: 365 SLSSANSNLPSPASSLSTLMTAFQKQGLSTKDLVALSGAHTIGQARCTTF 514
Score = 59.7 bits (124), Expect(2) = 5e-060
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = +2 / +2
Query: 746 NTTVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDSFVRSEATFRTKFA 925
NT +D++TP FDNK Y L + GLF SD L + + V + S+A F T FA
Sbjct: 599 NTLSPLDVLTPTTFDNKYYTNLKSQKGLFHSDQELFNGGSTDSRVSIYSTSQAIFFTDFA 778
Query: 926 RSMIKMG 946
+M+ MG
Sbjct: 779 AAMVNMG 799
>dbj|BD224564.1| Materials and methods for the modification of plant lignin content
Length = 1522
Score = 93.2 bits (197), Expect(5) = 7e-060
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +2 / +2
Query: 752 TVFMDLITPERFDNK*YVGLTNNLGLFKSDVALLTNATMKALVDSFVRSEATFRTKFARS 931
T +D+ TP FDNK YV L N LF SD L T+ + +V +F +++ F +F S
Sbjct: 824 TTKLDIRTPNVFDNKYYVDLLNRQTLFTSDQTLYTDTRTRDIVINFAVNQSLFFEQFVLS 1003
Query: 932 MIKMGQIEVLTGTQGEIRRNCRVINP 1009
M+KMGQ++VLTG++GEIR+NC NP
Sbjct: 1004 MLKMGQLDVLTGSEGEIRKNCWAANP 1081
Score = 68.0 bits (142), Expect(5) = 7e-060
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +2 / +2
Query: 83 FYDRTCPTAETIVQQTVAAAFRNNSGVAPALIRMHFHDCFVRGCDGSVLID 235
FY +CP+ E+IV + + A + A L+R+HFHDCFV+GCDGSVL++
Sbjct: 194 FYSSSCPSLESIVWERMEAYLSADITQAAGLLRLHFHDCFVQGCDGSVLLN 346
Score = 66.1 bits (138), Expect(5) = 7e-060
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +2 / +2
Query: 302 VVDRAKASLEAQCPGVVSCADVLAFAARDSVVLSGGLGYQVPGGRRD 442
+++ K ++EA C G+VSCAD++ AARDSVV++GG Y +P GRRD
Sbjct: 407 IINDIKENVEAACSGIVSCADIVTLAARDSVVMAGGPFYPLPLGRRD 547
Score = 56.1 bits (116), Expect(5) = 7e-060
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = +2 / +2
Query: 428 GGRRDGRISNDTEALNNLPPPFFNATELADRFASKNLTIEDLVVLSGAHTIGVSHCSGF 604
G R +N + L NLP P N T L K L DLV LSG HTIG S+CS F
Sbjct: 536 GRRDSLTFANRSTVLANLPSPTSNVTGLISVLGPKGLNFTDLVALSGGHTIGRSNCSSF 712
Score = 23.5 bits (45), Expect(5) = 7e-060
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 671 DPTLSKAYAFLLKSICPANTS 733
DPT+ +++A L CP +T+
Sbjct: 755 DPTMDQSFAKNLYLTCPTSTT 817
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 578,948,011
Number of Sequences: 355925
Number of extensions: 8313227
Number of successful extensions: 60243
Number of sequences better than 1.0e-020: 1096
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 20590642665
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)