TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8635730.2.1
(1031 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR015810.1|DR015810 STRS1_5_F07.g1_A034 Shoot tip pitch ... 149 2e-035
gb|CO368639.1|CO368639 RTK1_41_H02.g1_A029 Roots minus pota... 147 1e-034
gb|CF396536.1|CF396536 RTDS2_22_H07.g1_A021 Drought-stresse... 146 3e-034
gb|DR686108.1|DR686108 EST1076186 Normalized pine embryo li... 144 1e-033
gb|DR744906.1|DR744906 RTCU1_25_E06.g1_A029 Roots plus adde... 144 1e-033
gb|DT633531.1|DT633531 EST1148462 Normalized pine embryo li... 144 1e-033
gb|DR686505.1|DR686505 EST1076583 Normalized pine embryo li... 140 2e-032
gb|DT633408.1|DT633408 EST1148339 Normalized pine embryo li... 140 2e-032
gb|CF385274.1|CF385274 RTDR1_2_D01.g1_A015 Loblolly pine ro... 136 2e-031
gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine ro... 136 2e-031
gb|CF389081.1|CF389081 RTDR2_13_A10.g1_A021 Loblolly pine r... 136 2e-031
gb|CF400460.1|CF400460 RTWW1_5_H12.g1_A015 Well-watered lob... 136 2e-031
gb|CF401736.1|CF401736 RTWW1_14_C05.g1_A015 Well-watered lo... 136 2e-031
gb|CF402623.1|CF402623 RTWW1_21_B11.g1_A015 Well-watered lo... 136 2e-031
gb|CO162411.1|CO162411 FLD1_35_D02.b1_A029 Root flooded Pin... 136 2e-031
gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus ad... 136 2e-031
gb|CX646616.1|CX646616 COLD1_10_A05.g1_A029 Root cold Pinus... 136 2e-031
gb|CX648418.1|CX648418 COLD1_28_B12.g1_A029 Root cold Pinus... 136 2e-031
gb|DR057958.1|DR057958 RTNIT1_8_G05.g1_A029 Roots minus nit... 136 2e-031
gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulf... 136 2e-031
gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magn... 136 2e-031
gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iro... 136 2e-031
gb|DR168212.1|DR168212 RTPHOS1_23_H12.g1_A029 Roots minus p... 136 2e-031
gb|DR178268.1|DR178268 RTMNUT1_10_C01.g1_A029 Roots minus m... 136 2e-031
gb|DR179654.1|DR179654 RTMNUT1_23_B05.g2_A029 Roots minus m... 136 2e-031
gb|DR387764.1|DR387764 RTHG1_24_A11.b1_A029 Roots plus adde... 136 2e-031
gb|DR387774.1|DR387774 RTHG1_24_B11.b1_A029 Roots plus adde... 136 2e-031
gb|CN852309.1|CN852309 Pi148-1 Salicylate-treated slash pin... 136 3e-031
gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulf... 135 6e-031
gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine r... 134 8e-031
gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stresse... 134 8e-031
gb|CO365658.1|CO365658 RTK1_18_A01.g1_A029 Roots minus pota... 134 8e-031
gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus pota... 134 8e-031
gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for... 134 8e-031
gb|DR014928.1|DR014928 HEAT1_52_A11.g1_A029 Root at 37 C fo... 134 8e-031
gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch... 134 8e-031
gb|DR099337.1|DR099337 STRR1_54_G08.g1_A033 Stem Response R... 134 8e-031
gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iro... 134 8e-031
gb|BX679906.1|BX679906 BX679906 RS Pinus pinaster cDNA clon... 134 1e-030
gb|CO198121.1|CO198121 GEO1_11_A02.g1_A029 Root gravitropis... 134 1e-030
gb|CO361315.1|CO361315 NDL2_4_D03.b1_A029 Needles control 2... 134 1e-030
gb|CO361397.1|CO361397 NDL2_4_D03.g1_A029 Needles control 2... 134 1e-030
gb|DR117421.1|DR117421 RTMG1_6_G12.g1_A029 Roots minus magn... 134 1e-030
gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine r... 133 1e-030
gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine ro... 133 1e-030
gb|CF401126.1|CF401126 RTWW1_10_H02.b1_A015 Well-watered lo... 133 1e-030
gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clon... 133 1e-030
gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus... 133 1e-030
gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch... 133 1e-030
gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus ni... 133 1e-030
gb|DR111240.1|DR111240 RTS1_16_G05.b1_A029 Roots minus sulf... 133 1e-030
gb|DR164052.1|DR164052 RTFE1_46_B11.g1_A029 Roots minus iro... 133 1e-030
gb|CO173370.1|CO173370 NDL1_35_F03.g1_A029 Needles control ... 133 3e-030
gb|AW011253.1|AW011253 ST18F02 Pine TriplEx shoot tip libra... 132 4e-030
gb|CF669490.1|CF669490 RTCNT1_44_A10.b1_A029 Root control P... 132 5e-030
gb|CO173249.1|CO173249 NDL1_35_A08.b1_A029 Needles control ... 132 5e-030
gb|DR079932.1|DR079932 RTFEPL1_18_F11.g1_A029 Roots plus ad... 132 5e-030
gb|DR101609.1|DR101609 STRR1_74_C02.g1_A033 Stem Response R... 132 5e-030
gb|CO200901.1|CO200901 RTCNT2_2_G06.b1_A029 Root control 2 ... 131 7e-030
gb|CO163969.1|CO163969 FLD1_45_A11.b1_A029 Root flooded Pin... 131 1e-029
gb|DR744198.1|DR744198 RTCU1_20_G08.g1_A029 Roots plus adde... 130 1e-029
gb|DR746217.1|DR746217 RTCU1_35_B06.g1_A029 Roots plus adde... 130 1e-029
gb|CF395899.1|CF395899 RTDS2_19_G06.g1_A021 Drought-stresse... 130 2e-029
gb|CO201585.1|CO201585 RTCNT2_6_F07.g1_A029 Root control 2 ... 130 2e-029
gb|DR163874.1|DR163874 RTFE1_45_A12.g1_A029 Roots minus iro... 130 2e-029
gb|BX680288.1|BX680288 BX680288 RS Pinus pinaster cDNA clon... 129 4e-029
gb|DR161095.1|DR161095 RTFE1_9_G03.g1_A029 Roots minus iron... 129 4e-029
gb|BF517838.1|BF517838 NXSI_027_G09_F NXSI (Nsf Xylem Side ... 127 9e-029
gb|BX784172.1|BX784172 BX784172 Pinus pinaster differenciat... 126 3e-028
gb|DR101544.1|DR101544 STRR1_74_C02.b1_A033 Stem Response R... 126 3e-028
gb|BQ701670.1|BQ701670 NXSI_118_C02_F NXSI (Nsf Xylem Side ... 125 4e-028
gb|CF667045.1|CF667045 RTCNT1_27_G11.g1_A029 Root control P... 125 4e-028
gb|CF667523.1|CF667523 RTCNT1_30_H07.g1_A029 Root control P... 125 4e-028
gb|DR014691.1|DR014691 HEAT1_51_B07.b1_A029 Root at 37 C fo... 125 4e-028
gb|DR014768.1|DR014768 HEAT1_51_B07.g1_A029 Root at 37 C fo... 125 4e-028
gb|DR017658.1|DR017658 STRS1_17_E03.g1_A034 Shoot tip pitch... 125 4e-028
gb|CO170303.1|CO170303 NDL1_13_D05.b1_A029 Needles control ... 124 8e-028
gb|CO362169.1|CO362169 RTK1_1_F07.g1_A029 Roots minus potas... 124 8e-028
gb|DR058733.1|DR058733 RTNIT1_13_C07.g1_A029 Roots minus ni... 124 8e-028
gb|DR098778.1|DR098778 STRR1_47_G01.g1_A033 Stem Response R... 124 8e-028
gb|AW065119.1|AW065119 ST39H05 Pine TriplEx shoot tip libra... 124 1e-027
gb|CO368386.1|CO368386 RTK1_40_G08.b1_A029 Roots minus pota... 123 2e-027
gb|DR052727.1|DR052727 RTCA1_6_B03.g1_A029 Roots minus calc... 123 2e-027
gb|DR683147.1|DR683147 EST1073223 Normalized pine embryo li... 123 2e-027
gb|DT631233.1|DT631233 EST1146164 Normalized pine embryo li... 123 2e-027
gb|DR694940.1|DR694940 EST1085033 Normalized pine embryo li... 123 2e-027
gb|DT639133.1|DT639133 EST1154064 Normalized pine embryo li... 123 2e-027
gb|CF397637.1|CF397637 RTDS3_4_A07.g1_A022 Drought-stressed... 122 3e-027
gb|AY356371.1| Pinus taeda R2R3-MYB transcription factor (M... 122 3e-027
gb|CO172303.1|CO172303 NDL1_28_G10.g1_A029 Needles control ... 122 4e-027
gb|DR071883.1|DR071883 RTDK1_22_E02.g1_A029 Roots, dark Pin... 122 4e-027
gb|DR694707.1|DR694707 EST1084799 Normalized pine embryo li... 122 4e-027
gb|DT638995.1|DT638995 EST1153926 Normalized pine embryo li... 122 4e-027
gb|AY356372.1| Pinus taeda R2R3-MYB transcription factor (M... 122 4e-027
gb|CO361899.1|CO361899 NDL2_7_G04.g1_A029 Needles control 2... 121 8e-027
gb|DR685654.1|DR685654 EST1075731 Normalized pine embryo li... 121 8e-027
gb|DR694473.1|DR694473 EST1084565 Normalized pine embryo li... 121 8e-027
gb|DT638742.1|DT638742 EST1153673 Normalized pine embryo li... 121 8e-027
gb|CO158547.1|CO158547 FLD1_7_D03.g1_A029 Root flooded Pinu... 121 1e-026
gb|DR015700.1|DR015700 STRS1_5_D02.b1_A034 Shoot tip pitch ... 121 1e-026
gb|DR015783.1|DR015783 STRS1_5_D02.g1_A034 Shoot tip pitch ... 121 1e-026
gb|DR110104.1|DR110104 RTS1_8_C03.g1_A029 Roots minus sulfu... 121 1e-026
gb|BE520012.1|BE520012 NXCI_028_B03_F NXCI (Nsf Xylem Compr... 120 1e-026
gb|CF668816.1|CF668816 RTCNT1_38_G11.g1_A029 Root control P... 120 2e-026
gb|CO162972.1|CO162972 FLD1_38_D09.g1_A029 Root flooded Pin... 120 2e-026
gb|DR051127.1|DR051127 RTBOR1_27_G08.g1_A029 Roots plus add... 120 2e-026
gb|DR059561.1|DR059561 RTNIT1_18_A02.g1_A029 Roots minus ni... 120 2e-026
gb|DR081462.1|DR081462 RTFEPL1_29_G04.g1_A029 Roots plus ad... 120 2e-026
gb|DR167401.1|DR167401 RTPHOS1_18_C09.g1_A029 Roots minus p... 120 2e-026
gb|CF671993.1|CF671993 RTCNT1_60_D02.g1_A029 Root control P... 119 3e-026
gb|CO366297.1|CO366297 RTK1_27_B09.b1_A029 Roots minus pota... 119 4e-026
gb|DR020641.1|DR020641 STRS1_38_G12.b1_A034 Shoot tip pitch... 119 4e-026
gb|DR020720.1|DR020720 STRS1_38_G12.g1_A034 Shoot tip pitch... 119 4e-026
gb|DR167765.1|DR167765 RTPHOS1_20_H05.g1_A029 Roots minus p... 119 4e-026
gb|AW064634.1|AW064634 ST33H05 Pine TriplEx shoot tip libra... 118 5e-026
gb|CO164542.1|CO164542 FLD1_48_E08.g1_A029 Root flooded Pin... 117 1e-025
gb|DR050898.1|DR050898 RTBOR1_26_H05.b1_A029 Roots plus add... 117 1e-025
gb|CO173319.1|CO173319 NDL1_35_A08.g1_A029 Needles control ... 117 1e-025
gb|CX647457.1|CX647457 COLD1_16_B04.g1_A029 Root cold Pinus... 117 1e-025
gb|DR055413.1|DR055413 RTCA1_23_C03.g2_A029 Roots minus cal... 117 1e-025
gb|CF391376.1|CF391376 RTDR3_1_G04.g1_A022 Loblolly pine ro... 116 2e-025
gb|CF477905.1|CF477905 RTWW3_13_C03.g1_A022 Well-watered lo... 116 2e-025
gb|CO361388.1|CO361388 NDL2_4_C06.g1_A029 Needles control 2... 115 5e-025
gb|CF391408.1|CF391408 RTDR3_1_E10.g1_A022 Loblolly pine ro... 115 7e-025
gb|CF394327.1|CF394327 RTDS2_4_B08.g1_A021 Drought-stressed... 115 7e-025
gb|CF395727.1|CF395727 RTDS2_16_B07.g1_A021 Drought-stresse... 115 7e-025
gb|CF397272.1|CF397272 RTDS3_2_C01.g1_A022 Drought-stressed... 115 7e-025
gb|CF470618.1|CF470618 RTDS1_13_H10.g1_A015 Drought-stresse... 115 7e-025
gb|BQ290999.1|BQ290999 NXRV054_D07_F NXRV (Nsf Xylem Root w... 114 9e-025
gb|CF396041.1|CF396041 RTDS2_20_C12.g1_A021 Drought-stresse... 114 9e-025
gb|CO176256.1|CO176256 NDL1_60_G12.g1_A029 Needles control ... 114 9e-025
gb|DR683171.1|DR683171 EST1073247 Normalized pine embryo li... 114 9e-025
gb|DR683172.1|DR683172 EST1073248 Normalized pine embryo li... 114 9e-025
gb|DT631296.1|DT631296 EST1146227 Normalized pine embryo li... 114 9e-025
gb|CV034623.1|CV034623 RTNACL1_10_A11.g1_A029 Roots plus ad... 113 2e-024
gb|CF396247.1|CF396247 RTDS2_15_B11.g1_A021 Drought-stresse... 72 2e-024
gb|CV035967.1|CV035967 RTNACL1_43_E10.g1_A029 Roots plus ad... 112 3e-024
gb|DR384384.1|DR384384 RTHG1_1_H06.g1_A029 Roots plus added... 112 3e-024
gb|DR384689.1|DR384689 RTHG1_3_H06.g1_A029 Roots plus added... 112 3e-024
gb|AW065064.1|AW065064 ST39B10 Pine TriplEx shoot tip libra... 112 4e-024
gb|CF391868.1|CF391868 RTDR3_10_B04.g1_A022 Loblolly pine r... 112 4e-024
gb|CF399612.1|CF399612 RTDS3_26_H01.g1_A022 Drought-stresse... 112 4e-024
gb|DR069928.1|DR069928 RTDK1_10_F06.b1_A029 Roots, dark Pin... 112 4e-024
gb|DR072123.1|DR072123 RTDK1_24_F01.b1_A029 Roots, dark Pin... 112 4e-024
gb|DR079868.1|DR079868 RTFEPL1_18_F11.b1_A029 Roots plus ad... 112 4e-024
gb|DR094442.1|DR094442 STRR1_14_D03.g1_A033 Stem Response R... 112 4e-024
gb|CF667292.1|CF667292 RTCNT1_29_G02.b1_A029 Root control P... 111 6e-024
gb|BQ634727.1|BQ634727 NXRV072_E09_F NXRV (Nsf Xylem Root w... 111 1e-023
gb|DR111182.1|DR111182 RTS1_16_A02.b1_A029 Roots minus sulf... 110 2e-023
gb|DR167833.1|DR167833 RTPHOS1_21_A06.g1_A029 Roots minus p... 110 2e-023
gb|DR386238.1|DR386238 RTHG1_13_G03.g1_A029 Roots plus adde... 110 2e-023
gb|DR167893.1|DR167893 RTPHOS1_21_G02.g1_A029 Roots minus p... 109 4e-023
gb|CF663690.1|CF663690 RTCNT1_4_C02.g1_A029 Root control Pi... 108 6e-023
gb|CF390133.1|CF390133 RTDR2_12_C07.g1_A021 Loblolly pine r... 68 8e-023
gb|DR096412.1|DR096412 STRR1_27_G02.g1_A033 Stem Response R... 108 8e-023
gb|CV033497.1|CV033497 RTNACL1_34_H05.g1_A029 Roots plus ad... 106 3e-022
gb|DR089238.1|DR089238 RTAL1_7_A05.g1_A029 Roots plus added... 106 3e-022
gb|DR384837.1|DR384837 RTHG1_4_H08.g1_A029 Roots plus added... 106 3e-022
gb|DR098178.1|DR098178 STRR1_39_D04.g1_A033 Stem Response R... 105 5e-022
gb|BX250447.1|BX250447 BX250447 Pinus pinaster differenciat... 104 1e-021
gb|CF475091.1|CF475091 RTWW2_5_F10.g1_A021 Well-watered lob... 66 6e-021
gb|CF386912.1|CF386912 RTDR1_9_D07.g1_A015 Loblolly pine ro... 101 7e-021
gb|CF669684.1|CF669684 RTCNT1_45_A07.g1_A029 Root control P... 101 7e-021
gb|CF672556.1|CF672556 RTCNT1_64_A03.g1_A029 Root control P... 101 7e-021
gb|CO364221.1|CO364221 RTK1_14_A05.g1_A029 Roots minus pota... 101 7e-021
gb|CO366361.1|CO366361 RTK1_27_A03.g1_A029 Roots minus pota... 101 7e-021
gb|CV139163.1|CV139163 EST850372 Sequencing ESTs from loblo... 101 7e-021
gb|DR013838.1|DR013838 HEAT1_21_G09.g1_A029 Root at 37 C fo... 101 7e-021
gb|DR024798.1|DR024798 STRS1_67_B12.g1_A034 Shoot tip pitch... 101 7e-021
gb|DR024941.1|DR024941 STRS1_68_B11.g1_A034 Shoot tip pitch... 101 7e-021
gb|DR050127.1|DR050127 RTBOR1_21_A09.g1_A029 Roots plus add... 101 7e-021
gb|DR089099.1|DR089099 RTAL1_6_B11.g1_A029 Roots plus added... 101 7e-021
gb|DT626587.1|DT626587 EST1158511 Sequencing ESTs from lobl... 101 7e-021
>gb|DR015810.1|DR015810 STRS1_5_F07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_F07_A034 5', mRNA sequence
Length = 829
Score = 149 bits (321), Expect = 2e-035
Identities = 52/70 (74%), Positives = 66/70 (94%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP++RHGGF+++ED++I SLY IGS+WS+IA++LPGRTDND+KNY
Sbjct: 147 RCGKSCRLRWLNYLRPDIRHGGFSEDEDNIICSLYASIGSRWSIIAAQLPGRTDNDIKNY 326
Query: 181 WNTKLKKRYL 210
WNT+LKK+ L
Sbjct: 327 WNTRLKKKLL 356
>gb|CO368639.1|CO368639 RTK1_41_H02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_41_H02_A029 5', mRNA sequence
Length = 782
Score = 147 bits (315), Expect = 1e-034
Identities = 52/76 (68%), Positives = 67/76 (88%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP+++HG F++EED +I +LY IGS+WS+IA++LPGRTDND+KNY
Sbjct: 553 RCGKSCRLRWLNYLRPDIKHGDFSEEEDDIICTLYTSIGSRWSIIAAQLPGRTDNDIKNY 732
Query: 181 WNTKLKKRYLASSTST 228
WNT+LKK LA++ T
Sbjct: 733 WNTRLKKNCLANAART 780
>gb|CF396536.1|CF396536 RTDS2_22_H07.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_22_H07_A021 5', mRNA sequence
Length = 777
Score = 146 bits (313), Expect = 3e-034
Identities = 51/73 (69%), Positives = 66/73 (90%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP ++HGGF++EED++I +LY IGS+WS+IA++LPGRTDND+KNY
Sbjct: 97 RCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICTLYLSIGSRWSIIAAQLPGRTDNDIKNY 276
Query: 181 WNTKLKKRYLASS 219
WNT+LKK+ L +
Sbjct: 277 WNTRLKKKLLGKT 315
>gb|DR686108.1|DR686108 EST1076186 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABC41 3' end, mRNA sequence
Length = 752
Score = 144 bits (309), Expect = 1e-033
Identities = 50/78 (64%), Positives = 66/78 (84%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP+++HG F++EED +I +LY IGS+WS+IA++LPGRTDND+KNY
Sbjct: 298 RCGKSCRLRWLNYLRPDIKHGDFSEEEDDIICTLYTSIGSRWSIIAAQLPGRTDNDIKNY 477
Query: 181 WNTKLKKRYLASSTSTGE 234
WNT+LKK+ L + +
Sbjct: 478 WNTRLKKKLLGKCSKDND 531
>gb|DR744906.1|DR744906 RTCU1_25_E06.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_25_E06_A029 5', mRNA sequence
Length = 691
Score = 144 bits (309), Expect = 1e-033
Identities = 50/78 (64%), Positives = 66/78 (84%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP+++HG F++EED +I +LY IGS+WS+IA++LPGRTDND+KNY
Sbjct: 267 RCGKSCRLRWLNYLRPDIKHGDFSEEEDDIICTLYTSIGSRWSIIAAQLPGRTDNDIKNY 446
Query: 181 WNTKLKKRYLASSTSTGE 234
WNT+LKK+ L + +
Sbjct: 447 WNTRLKKKLLGKCSKDND 500
>gb|DT633531.1|DT633531 EST1148462 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFV86 3' end, mRNA sequence
Length = 817
Score = 144 bits (309), Expect = 1e-033
Identities = 50/78 (64%), Positives = 66/78 (84%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP+++HG F++EED +I +LY IGS+WS+IA++LPGRTDND+KNY
Sbjct: 306 RCGKSCRLRWLNYLRPDIKHGDFSEEEDDIICTLYTSIGSRWSIIAAQLPGRTDNDIKNY 485
Query: 181 WNTKLKKRYLASSTSTGE 234
WNT+LKK+ L + +
Sbjct: 486 WNTRLKKKLLGKCSKDND 539
>gb|DR686505.1|DR686505 EST1076583 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABG77 3' end, mRNA sequence
Length = 681
Score = 140 bits (300), Expect = 2e-032
Identities = 50/70 (71%), Positives = 65/70 (92%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP L+HGGF++EED++I SL+ IGS+WS+IA++LPGRTDND+KN+
Sbjct: 212 RCGKSCRLRWLNYLRPNLKHGGFSEEEDNMIYSLFLGIGSRWSMIAAQLPGRTDNDIKNH 391
Query: 181 WNTKLKKRYL 210
WN++LKK+ L
Sbjct: 392 WNSRLKKKLL 421
>gb|DT633408.1|DT633408 EST1148339 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFU59 3' end, mRNA sequence
Length = 690
Score = 140 bits (300), Expect = 2e-032
Identities = 50/70 (71%), Positives = 65/70 (92%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRWLNYLRP L+HGGF++EED++I SL+ IGS+WS+IA++LPGRTDND+KN+
Sbjct: 220 RCGKSCRLRWLNYLRPNLKHGGFSEEEDNMIYSLFLGIGSRWSMIAAQLPGRTDNDIKNH 399
Query: 181 WNTKLKKRYL 210
WN++LKK+ L
Sbjct: 400 WNSRLKKKLL 429
>gb|CF385274.1|CF385274 RTDR1_2_D01.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_2_D01_A015 5', mRNA
sequence
Length = 703
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 38 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 217
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 218 WNTHIKRKLL 247
>gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_4_A10_A021 5', mRNA
sequence
Length = 760
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 166 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 345
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 346 WNTHIKRKLL 375
>gb|CF389081.1|CF389081 RTDR2_13_A10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_13_A10_A021 5', mRNA
sequence
Length = 743
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 92 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 271
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 272 WNTHIKRKLL 301
>gb|CF400460.1|CF400460 RTWW1_5_H12.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_H12_A015 5', mRNA sequence
Length = 747
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 100 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 279
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 280 WNTHIKRKLL 309
>gb|CF401736.1|CF401736 RTWW1_14_C05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_14_C05_A015 5', mRNA sequence
Length = 792
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 135 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 314
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 315 WNTHIKRKLL 344
>gb|CF402623.1|CF402623 RTWW1_21_B11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_21_B11_A015 5', mRNA sequence
Length = 755
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 112 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 291
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 292 WNTHIKRKLL 321
>gb|CO162411.1|CO162411 FLD1_35_D02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_35_D02_A029 3', mRNA sequence
Length = 717
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / -3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 664 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 485
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 484 WNTHIKRKLL 455
>gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_B11_A029 5', mRNA sequence
Length = 734
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 143 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 322
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 323 WNTHIKRKLL 352
>gb|CX646616.1|CX646616 COLD1_10_A05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_A05_A029 5', mRNA sequence
Length = 887
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 135 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 314
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 315 WNTHIKRKLL 344
>gb|CX648418.1|CX648418 COLD1_28_B12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_B12_A029 5', mRNA sequence
Length = 868
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 147 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 326
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 327 WNTHIKRKLL 356
>gb|DR057958.1|DR057958 RTNIT1_8_G05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_G05_A029 5', mRNA sequence
Length = 849
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 103 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 282
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 283 WNTHIKRKLL 312
>gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_17_F02_A029 5', mRNA sequence
Length = 630
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 152 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 331
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 332 WNTHIKRKLL 361
>gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_4_G10_A029 5', mRNA sequence
Length = 805
Score = 136 bits (292), Expect = 2e-031
Identities = 47/71 (66%), Positives = 62/71 (87%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 163 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNY 342
Query: 181 WNTKLKKRYLA 213
WNT +K++ L+
Sbjct: 343 WNTHIKRKLLS 375
>gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_D10_A029 5', mRNA sequence
Length = 766
Score = 136 bits (292), Expect = 2e-031
Identities = 47/71 (66%), Positives = 62/71 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 162 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNY 341
Query: 181 WNTKLKKRYLA 213
WNT +K++ L+
Sbjct: 342 WNTHIKRKLLS 374
>gb|DR168212.1|DR168212 RTPHOS1_23_H12.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_23_H12_A029 5', mRNA sequence
Length = 600
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 144 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 323
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 324 WNTHIKRKLL 353
>gb|DR178268.1|DR178268 RTMNUT1_10_C01.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_10_C01_A029 5', mRNA sequence
Length = 719
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 130 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 309
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 310 WNTHIKRKLL 339
>gb|DR179654.1|DR179654 RTMNUT1_23_B05.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_23_B05_A029 5', mRNA sequence
Length = 685
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 54 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 233
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 234 WNTHIKRKLL 263
>gb|DR387764.1|DR387764 RTHG1_24_A11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_A11_A029 3', mRNA sequence
Length = 796
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / -3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 650 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 471
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 470 WNTHIKRKLL 441
>gb|DR387774.1|DR387774 RTHG1_24_B11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_B11_A029 3', mRNA sequence
Length = 781
Score = 136 bits (292), Expect = 2e-031
Identities = 47/70 (67%), Positives = 61/70 (87%)
Frame = +1 / -3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 626 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNY 447
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 446 WNTHIKRKLL 417
>gb|CN852309.1|CN852309 Pi148-1 Salicylate-treated slash pine seedlings Pinus elliottii
cDNA, mRNA sequence
Length = 270
Score = 136 bits (291), Expect = 3e-031
Identities = 47/68 (69%), Positives = 60/68 (88%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G FT+EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 67 RCGKSCRLRWINYLRPDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNY 246
Query: 181 WNTKLKKR 204
WNT +KK+
Sbjct: 247 WNTHIKKK 270
>gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_F03_A029 5', mRNA sequence
Length = 729
Score = 135 bits (289), Expect = 6e-031
Identities = 47/71 (66%), Positives = 62/71 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGFT+EED LI+ L+ +G+KWS+IA RL GRTDN++KNY
Sbjct: 155 RCGKSCRLRWINYLRPDLKRGGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNEIKNY 334
Query: 181 WNTKLKKRYLA 213
WN+ +KK+ L+
Sbjct: 335 WNSHIKKKLLS 367
>gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_17_D12_A022 5', mRNA
sequence
Length = 659
Score = 134 bits (288), Expect = 8e-031
Identities = 46/71 (64%), Positives = 63/71 (88%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGF+++ED LIL L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 184 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNY 363
Query: 181 WNTKLKKRYLA 213
WN+ LK++ ++
Sbjct: 364 WNSHLKRKLIS 396
>gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_D09_A015 5', mRNA sequence
Length = 667
Score = 134 bits (288), Expect = 8e-031
Identities = 46/71 (64%), Positives = 63/71 (88%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGF+++ED LIL L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 155 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNY 334
Query: 181 WNTKLKKRYLA 213
WN+ LK++ ++
Sbjct: 335 WNSHLKRKLIS 367
>gb|CO365658.1|CO365658 RTK1_18_A01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_18_A01_A029 5', mRNA sequence
Length = 812
Score = 134 bits (288), Expect = 8e-031
Identities = 46/71 (64%), Positives = 63/71 (88%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGF+++ED LIL L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 103 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNY 282
Query: 181 WNTKLKKRYLA 213
WN+ LK++ ++
Sbjct: 283 WNSHLKRKLIS 315
>gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_E03_A029 5', mRNA sequence
Length = 873
Score = 134 bits (288), Expect = 8e-031
Identities = 46/71 (64%), Positives = 63/71 (88%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGF+++ED LIL L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 157 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNY 336
Query: 181 WNTKLKKRYLA 213
WN+ LK++ ++
Sbjct: 337 WNSHLKRKLIS 369
>gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_A03_A029 3', mRNA sequence
Length = 790
Score = 134 bits (288), Expect = 8e-031
Identities = 46/71 (64%), Positives = 63/71 (88%)
Frame = +1 / -1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGF+++ED LIL L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 640 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNY 461
Query: 181 WNTKLKKRYLA 213
WN+ LK++ ++
Sbjct: 460 WNSHLKRKLIS 428
>gb|DR014928.1|DR014928 HEAT1_52_A11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_A11_A029 5', mRNA sequence
Length = 854
Score = 134 bits (288), Expect = 8e-031
Identities = 46/71 (64%), Positives = 63/71 (88%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGF+++ED LIL L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 106 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNY 285
Query: 181 WNTKLKKRYLA 213
WN+ LK++ ++
Sbjct: 286 WNSHLKRKLIS 318
>gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_A05_A034 5', mRNA sequence
Length = 752
Score = 134 bits (288), Expect = 8e-031
Identities = 46/71 (64%), Positives = 63/71 (88%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGF+++ED LIL L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 162 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNY 341
Query: 181 WNTKLKKRYLA 213
WN+ LK++ ++
Sbjct: 342 WNSHLKRKLIS 374
>gb|DR099337.1|DR099337 STRR1_54_G08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_G08_A033 5', mRNA sequence
Length = 499
Score = 134 bits (288), Expect = 8e-031
Identities = 46/71 (64%), Positives = 63/71 (88%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGF+++ED LIL L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 132 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNY 311
Query: 181 WNTKLKKRYLA 213
WN+ LK++ ++
Sbjct: 312 WNSHLKRKLIS 344
>gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_11_H03_A029 5', mRNA sequence
Length = 669
Score = 134 bits (288), Expect = 8e-031
Identities = 46/71 (64%), Positives = 63/71 (88%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ GGF+++ED LIL L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 162 RCGKSCRLRWINYLRPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNY 341
Query: 181 WNTKLKKRYLA 213
WN+ LK++ ++
Sbjct: 342 WNSHLKRKLIS 374
>gb|BX679906.1|BX679906 BX679906 RS Pinus pinaster cDNA clone RS36A06, mRNA sequence
Length = 448
Score = 134 bits (287), Expect = 1e-030
Identities = 46/71 (64%), Positives = 62/71 (87%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 178 RCGKSCRLRWINYLRPDLKRGSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 357
Query: 181 WNTKLKKRYLA 213
WNT +K++ L+
Sbjct: 358 WNTHMKRKLLS 390
>gb|CO198121.1|CO198121 GEO1_11_A02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_11_A02_A029 5', mRNA sequence
Length = 667
Score = 134 bits (287), Expect = 1e-030
Identities = 46/71 (64%), Positives = 62/71 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 114 RCGKSCRLRWINYLRPDLKRGSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 293
Query: 181 WNTKLKKRYLA 213
WNT +K++ L+
Sbjct: 294 WNTHMKRKLLS 326
>gb|CO361315.1|CO361315 NDL2_4_D03.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_D03_A029 3', mRNA sequence
Length = 894
Score = 134 bits (287), Expect = 1e-030
Identities = 46/71 (64%), Positives = 62/71 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 101 RCGKSCRLRWINYLRPDLKRGSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 280
Query: 181 WNTKLKKRYLA 213
WNT +K++ L+
Sbjct: 281 WNTHMKRKLLS 313
>gb|CO361397.1|CO361397 NDL2_4_D03.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_D03_A029 5', mRNA sequence
Length = 804
Score = 134 bits (287), Expect = 1e-030
Identities = 46/71 (64%), Positives = 62/71 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 107 RCGKSCRLRWINYLRPDLKRGSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 286
Query: 181 WNTKLKKRYLA 213
WNT +K++ L+
Sbjct: 287 WNTHMKRKLLS 319
>gb|DR117421.1|DR117421 RTMG1_6_G12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_G12_A029 5', mRNA sequence
Length = 872
Score = 134 bits (287), Expect = 1e-030
Identities = 46/71 (64%), Positives = 62/71 (87%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 46 RCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 225
Query: 181 WNTKLKKRYLA 213
WNT +K++ L+
Sbjct: 226 WNTHIKRKLLS 258
>gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_10_E10_A015 5', mRNA
sequence
Length = 733
Score = 133 bits (286), Expect = 1e-030
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 153 RCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 332
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 333 WNTHIKRKLL 362
>gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_B07_A021 5', mRNA
sequence
Length = 712
Score = 133 bits (286), Expect = 1e-030
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 195 RCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 374
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 375 WNTHIKRKLL 404
>gb|CF401126.1|CF401126 RTWW1_10_H02.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_10_H02_A015 3', mRNA sequence
Length = 620
Score = 133 bits (286), Expect = 1e-030
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = +1 / -2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 466 RCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 287
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 286 WNTHIKRKLL 257
>gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clone RS58C06, mRNA sequence
Length = 605
Score = 133 bits (286), Expect = 1e-030
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = +1 / +3
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 141 RCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 320
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 321 WNTHIKRKLL 350
>gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_F10_A029 5', mRNA sequence
Length = 826
Score = 133 bits (286), Expect = 1e-030
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = +1 / +1
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 184 RCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 363
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 364 WNTHIKRKLL 393
>gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_E05_A034 5', mRNA sequence
Length = 791
Score = 133 bits (286), Expect = 1e-030
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 179 RCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 358
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 359 WNTHIKRKLL 388
>gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_D06_A029 5', mRNA sequence
Length = 726
Score = 133 bits (286), Expect = 1e-030
Identities = 46/70 (65%), Positives = 61/70 (87%)
Frame = +1 / +2
Query: 1 RCGKSCRLRWLNYLRPELRHGGFTDEEDSLILSLYGEIGSKWSVIASRLPGRTDNDVKNY 180
RCGKSCRLRW+NYLRP+L+ G F++EED LI+ L+ +G+KWS+IA RLPGRTDN++KNY
Sbjct: 167 RCGKSCRLRWINYLRPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNY 346
Query: 181 WNTKLKKRYL 210
WNT +K++ L
Sbjct: 347 WNTHIKRKLL 376
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 416,966,335
Number of Sequences: 355925
Number of extensions: 5523424
Number of successful extensions: 150747
Number of sequences better than 1.0e-020: 194
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 15532898800
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)