TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 44956.2.1
(1252 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR110432.1|DR110432 RTS1_10_G10.g1_A029 Roots minus sulf... 469 e-131
gb|CO366379.1|CO366379 RTK1_27_B10.g1_A029 Roots minus pota... 442 e-123
gb|DR110341.1|DR110341 RTS1_10_G10.b1_A029 Roots minus sulf... 387 e-107
gb|DR164431.1|DR164431 RTFE1_48_H05.g1_A029 Roots minus iro... 377 e-103
gb|CX646481.1|CX646481 COLD1_9_D05.g1_A029 Root cold Pinus ... 376 e-103
gb|CO366298.1|CO366298 RTK1_27_B10.b1_A029 Roots minus pota... 375 e-103
gb|CX648630.1|CX648630 COLD1_29_H09.g1_A029 Root cold Pinus... 373 e-102
gb|DR387160.1|DR387160 RTHG1_19_H02.g1_A029 Roots plus adde... 359 2e-098
gb|DT638793.1|DT638793 EST1153724 Normalized pine embryo li... 265 2e-095
gb|DR691467.1|DR691467 EST1081554 Normalized pine embryo li... 316 2e-085
gb|DR387088.1|DR387088 RTHG1_19_H02.b1_A029 Roots plus adde... 313 2e-084
gb|DR056578.1|DR056578 RTCA1_31_E11.b1_A029 Roots minus cal... 296 2e-079
gb|DR068729.1|DR068729 RTDK1_2_C05.g1_A029 Roots, dark Pinu... 295 4e-079
gb|DR089313.1|DR089313 RTAL1_7_H09.g1_A029 Roots plus added... 284 8e-076
gb|DR690147.1|DR690147 EST1080233 Normalized pine embryo li... 243 3e-063
gb|DR386680.1|DR386680 RTHG1_16_F06.g1_A029 Roots plus adde... 237 9e-062
gb|BX678759.1|BX678759 BX678759 RS Pinus pinaster cDNA clon... 235 4e-061
gb|DT636058.1|DT636058 EST1150989 Normalized pine embryo li... 224 9e-058
gb|CX646399.1|CX646399 COLD1_9_D05.b1_A029 Root cold Pinus ... 219 4e-056
gb|DR386596.1|DR386596 RTHG1_16_F06.b1_A029 Roots plus adde... 187 2e-046
gb|DR068649.1|DR068649 RTDK1_2_C05.b1_A029 Roots, dark Pinu... 127 1e-043
gb|BG317846.1|BG317846 NXPV_006_D03_F NXPV (Nsf Xylem Plani... 171 7e-042
gb|BQ696933.1|BQ696933 NXPV_047_A08_F NXPV (Nsf Xylem Plani... 171 7e-042
gb|DR694408.1|DR694408 EST1084500 Normalized pine embryo li... 95 4e-036
gb|BE123745.1|BE123745 NXNV_153_F02_F Nsf Xylem Normal wood... 146 3e-034
gb|DR744138.1|DR744138 RTCU1_20_A08.g1_A029 Roots plus adde... 104 2e-026
gb|DR053427.1|DR053427 RTCA1_11_B12.b1_A029 Roots minus cal... 103 4e-026
gb|BQ698789.1|BQ698789 NXNV_063_H02_F Nsf Xylem Normal wood... 114 2e-024
gb|DR744058.1|DR744058 RTCU1_20_A08.b1_A029 Roots plus adde... 94 2e-023
gb|CD025117.1|CD025117 NXSI_009_F04_F NXSI (Nsf Xylem Side ... 110 3e-023
gb|BQ290504.1|BQ290504 NXRV045_B02_F NXRV (Nsf Xylem Root w... 106 3e-022
gb|BQ699985.1|BQ699985 NXRV132_F03_F NXRV (Nsf Xylem Root w... 106 3e-022
gb|DN448196.1|DN448196 EST943995 Sequencing ESTs from loblo... 75 6e-022
gb|DN448318.1|DN448318 EST944117 Sequencing ESTs from loblo... 75 6e-022
gb|DT624306.1|DT624306 EST1158581 Sequencing ESTs from lobl... 75 6e-022
gb|DT626557.1|DT626557 EST1158481 Sequencing ESTs from lobl... 75 6e-022
gb|CV138710.1|CV138710 EST849919 Sequencing ESTs from loblo... 68 2e-021
gb|DN447649.1|DN447649 EST943448 Sequencing ESTs from loblo... 68 2e-021
gb|CO413464.1|CO413464 EST843849 Sequencing ESTs from loblo... 68 2e-021
gb|CO411223.1|CO411223 EST841608 Sequencing ESTs from loblo... 68 2e-021
gb|DR090135.1|DR090135 RTAL1_12_H09.g1_A029 Roots plus adde... 103 2e-021
gb|CX646377.1|CX646377 COLD1_9_A11.b1_A029 Root cold Pinus ... 68 3e-021
gb|DR069225.1|DR069225 RTDK1_5_E12.g1_A029 Roots, dark Pinu... 68 3e-021
gb|DR069972.1|DR069972 RTDK1_10_B06.g1_A029 Roots, dark Pin... 68 3e-021
gb|DN465657.1|DN465657 EST961456 Sequencing ESTs from loblo... 68 4e-021
gb|CX715189.1|CX715189 RTPQ1_32_F12.b1_A032 Roots treated w... 68 4e-021
gb|CF402020.1|CF402020 RTWW1_16_E06.g1_A015 Well-watered lo... 68 1e-020
>gb|DR110432.1|DR110432 RTS1_10_G10.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_10_G10_A029 5', mRNA sequence
Length = 812
Score = 469 bits (1019), Expect = e-131
Identities = 199/259 (76%), Positives = 223/259 (86%)
Frame = -3 / +2
Query: 980 AAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKE 801
A++EQA + +EAPV VVTGASR GCKVLVNYARS KEAE+VS++
Sbjct: 2 ASIEQATAETPKFVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKEAEDVSRQ 181
Query: 800 IEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQD 621
IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM KSQWQD
Sbjct: 182 IEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRMTKSQWQD 361
Query: 620 VIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTV 441
VIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKAGVIG TKTV
Sbjct: 362 VIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTV 541
Query: 440 AREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALN 261
AREYA+RNI NAIAPGFIASDMTA+LG+E+EKKIL TIPLGRYGQPEEVAGLVEFLALN
Sbjct: 542 AREYATRNITANAIAPGFIASDMTAKLGDEIEKKILQTIPLGRYGQPEEVAGLVEFLALN 721
Query: 260 PAASYMTGQVLTIDGGMVM 204
PAA+Y+TGQV IDGGMVM
Sbjct: 722 PAANYITGQVFNIDGGMVM 778
Score = 257 bits (555), Expect = 1e-067
Identities = 117/258 (45%), Positives = 156/258 (60%)
Frame = +3 / -2
Query: 201 LHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGSHIR 380
LH H S+N ++L+ I +K QEL Q CNFL L+I R G ++FLL +KF SH+
Sbjct: 781 LHNHSSINIENLACDIVGSWIKSQELHQTCNFLRLSIPTQRYGLENFLLNFITKFCSHV* 602
Query: 381 CNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFH 560
N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D+ SL L H
Sbjct: 601 SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYIDDSSLPLLH 422
Query: 561 HYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRLY 740
H F C LCTK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP + F H L
Sbjct: 421 HNFSCCLCTKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKHTLN 242
Query: 741 ISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCN 920
IS *+I S + T FNL ++FSL PGIV++NL +C + S+ N SR +
Sbjct: 241 ISLL*HIPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFANSSRSSSY 62
Query: 921 NNNWSFQLGSIFYNCLFN 974
N++W F F +CLFN
Sbjct: 61 NSHWGFNKFRSFSSCLFN 8
Score = 211 bits (455), Expect(2) = 5e-088
Identities = 99/158 (62%), Positives = 112/158 (70%)
Frame = +1 / -3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 474 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 295
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
S VPH S I STSASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA
Sbjct: 294 RMSTVPHESITVLNIPSTSASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPA 115
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAA 981
P RA+ALPIPL+APVTT TGAS+ + +ACS A
Sbjct: 114 LPSDRAMALPIPLEAPVTTATGASTNLGVSAVACSIDA 1
Score = 200 bits (431), Expect = 2e-050
Identities = 101/235 (42%), Positives = 137/235 (58%)
Frame = -2 / +1
Query: 903 RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDE 724
R+W +CS SR+ GS +LCPV + G*R D*S WW + L R K *C Y
Sbjct: 79 RNWQSHCSVTR*SRL*GSCELCPVDKGG*RCF*TD*SCWWLSHCLWRGYVKGG*C*GYV* 258
Query: 723 SSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKG 544
+ + MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+G
Sbjct: 259 NGN*LMGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEG 438
Query: 543 KNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCR 364
K++Q+ C W WQ S*L SQ S W + C+G+C KY +C+ + ++C +DC+
Sbjct: 439 KSHQYSFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHSSWIYCFRHDCK 618
Query: 363 TWRRA*EENLVNHSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGNVR 199
TW *EEN +H+ +W T GSCR G V G * LY G * R+G V+
Sbjct: 619 TW**N*EENSPDHTSG*VWTTGGSCRFGGVLGS*SSCQLYHRPGFQY*WRNGYVK 783
Score = 134 bits (288), Expect(2) = 5e-088
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1 / -3
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPSI+ T PVI*LAAGLRA+NST PATSSG PYLP GMV +IFF AV+S+
Sbjct: 780 YITIPPSILKTWPVI*LAAGLRAKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSE 601
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 600 AINPGAMALAVIFLVAYSLATVLV 529
Score = 59.7 bits (124), Expect(3) = 2e-022
Identities = 47/107 (43%), Positives = 49/107 (45%)
Frame = +2 / -1
Query: 203 TLPSLRQL*APVQSYS*LRG*GPGTRPTLQLPLVGHISLTEWLTRFSSQALLQVRQSYQM 382
T P L Q * P YS * P T P LQLP V H W FSSQ QV QS
Sbjct: 779 T*PFLHQY*KPGL*YSWQLD*EPRTPPNLQLPPVVHTYPEVWSGEFSSQFHHQVLQSCLK 600
Query: 383 Q*TLVQ*HSH*YFCLHTPWQLFL*NQSLQPWLRYN*LGQHCQ*DQLQ 523
Q* H *YF H P Q Q L WL N*L +CQ +Q Q
Sbjct: 599 Q*IQELWHWL*YF*WHIPLQQS*SAQ*LLLWLHCN*LALYCQSNQPQ 459
Score = 46.9 bits (96), Expect(3) = 2e-022
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +2 / -1
Query: 578 PVYKGRHQ*DSDQLRLATEIXXXXXTMCLV*SLHYLPAHLLFPI 709
PVYK HQ*DS Q ATEI +C +* LH LP LFP+
Sbjct: 404 PVYKEIHQ*DSSQ*HPATEILSFSSLVCPL*YLHCLPGCQLFPM 273
Score = 37.7 bits (76), Expect(3) = 2e-022
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2 / -1
Query: 785 HQMLQSLWRPLQPLSRTGHSLPEPCILLFQGLEQ 886
HQ LQS+ + LQP TGHS EP LL+ EQ
Sbjct: 197 HQQLQSV*KHLQPPLSTGHSSQEPYSLLYLVTEQ 96
>gb|CO366379.1|CO366379 RTK1_27_B10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_B10_A029 5', mRNA sequence
Length = 852
Score = 442 bits (960), Expect = e-123
Identities = 183/219 (83%), Positives = 203/219 (92%)
Frame = -3 / -2
Query: 860 CKVLVNYARSSKEAEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVN 681
CKVLVNYARS KEAE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVN
Sbjct: 842 CKVLVNYARSIKEAEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVN 663
Query: 680 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGN 501
NAGIT+DTL+MRM KSQWQDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN
Sbjct: 662 NAGITKDTLMMRMTKSQWQDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGN 483
Query: 500 VGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTIP 321
+GQANYSAAKAGVIG TKTVAREYA+RNI NAIAPGFIASDMTA+LG+E+EKKIL TIP
Sbjct: 482 IGQANYSAAKAGVIGLTKTVAREYATRNITANAIAPGFIASDMTAKLGDEIEKKILQTIP 303
Query: 320 LGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
LGRYGQPEEVAGLVEFLALNPAA+Y+TGQV IDGGMVM
Sbjct: 302 LGRYGQPEEVAGLVEFLALNPAANYITGQVFNIDGGMVM 186
Score = 235 bits (508), Expect = 4e-061
Identities = 105/222 (47%), Positives = 138/222 (62%)
Frame = +3 / +3
Query: 201 LHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGSHIR 380
LH H S+N ++L+ I +K QEL Q CNFL L+I R G ++FLL +KF SH+
Sbjct: 183 LHNHSSINIENLACDIVGSWIKSQELHQTCNFLRLSIPTQRYGLENFLLNFITKFCSHV* 362
Query: 381 CNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFH 560
N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D+ SL L H
Sbjct: 363 SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYIDDSSLPLLH 542
Query: 561 HYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRLY 740
H F C LCTK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP + F H L
Sbjct: 543 HNFSCCLCTKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKHTLN 722
Query: 741 ISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASC 866
IS *+I S + T FNL ++FSL PGIV++NL +C
Sbjct: 723 ISLL*HIPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTAC 848
Score = 192 bits (414), Expect = 4e-048
Identities = 97/223 (43%), Positives = 131/223 (58%)
Frame = -2 / -1
Query: 867 SRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCA 688
SR+ GS +LCPV + G*R D*S WW + L R K *C Y + + MGN+
Sbjct: 849 SRL*GSCELCPVDKGG*RCF*TD*SCWWLSHCLWRGYVKGG*C*GYV*NGN*LMGNS*HP 670
Query: 687 GK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQHCICSWSY 508
GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+GK++Q+ C W
Sbjct: 669 GKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEGKSHQYSFCGWFD 490
Query: 507 WQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRTWRRA*EENLVN 328
WQ S*L SQ S W + C+G+C KY +C+ + ++C +DC+TW *EEN +
Sbjct: 489 WQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHSSWIYCFRHDCKTW**N*EENSPD 310
Query: 327 HSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGNVR 199
H+ +W T GSCR G V G * LY G * R+G V+
Sbjct: 309 HTSG*VWTTGGSCRFGGVLGS*SSCQLYHRPGFQY*WRNGYVK 181
Score = 162 bits (349), Expect(2) = 2e-073
Identities = 77/120 (64%), Positives = 85/120 (70%)
Frame = +1 / +1
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 490 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 669
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
S VPH S I STSASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA
Sbjct: 670 RMSTVPHESITVLNIPSTSASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPA 849
Score = 134 bits (288), Expect(2) = 2e-073
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1 / +1
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPSI+ T PVI*LAAGLRA+NST PATSSG PYLP GMV +IFF AV+S+
Sbjct: 184 YITIPPSILKTWPVI*LAAGLRAKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSE 363
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 364 AINPGAMALAVIFLVAYSLATVLV 435
Score = 59.7 bits (124), Expect(3) = 2e-021
Identities = 47/107 (43%), Positives = 49/107 (45%)
Frame = +2 / +2
Query: 203 TLPSLRQL*APVQSYS*LRG*GPGTRPTLQLPLVGHISLTEWLTRFSSQALLQVRQSYQM 382
T P L Q * P YS * P T P LQLP V H W FSSQ QV QS
Sbjct: 185 T*PFLHQY*KPGL*YSWQLD*EPRTPPNLQLPPVVHTYPEVWSGEFSSQFHHQVLQSCLK 364
Query: 383 Q*TLVQ*HSH*YFCLHTPWQLFL*NQSLQPWLRYN*LGQHCQ*DQLQ 523
Q* H *YF H P Q Q L WL N*L +CQ +Q Q
Sbjct: 365 Q*IQELWHWL*YF*WHIPLQQS*SAQ*LLLWLHCN*LALYCQSNQPQ 505
Score = 46.9 bits (96), Expect(3) = 2e-021
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +2 / +2
Query: 578 PVYKGRHQ*DSDQLRLATEIXXXXXTMCLV*SLHYLPAHLLFPI 709
PVYK HQ*DS Q ATEI +C +* LH LP LFP+
Sbjct: 560 PVYKEIHQ*DSSQ*HPATEILSFSSLVCPL*YLHCLPGCQLFPM 691
Score = 34.5 bits (69), Expect(3) = 2e-021
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 785 HQMLQSLWRPLQPLSRTGHSLPEPCILL 868
HQ LQS+ + LQP TGHS EP LL
Sbjct: 767 HQQLQSV*KHLQPPLSTGHSSQEPYSLL 850
>gb|DR110341.1|DR110341 RTS1_10_G10.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_10_G10_A029 3', mRNA sequence
Length = 745
Score = 387 bits (840), Expect = e-107
Identities = 160/188 (85%), Positives = 175/188 (93%)
Frame = -3 / +3
Query: 767 GGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFL 588
GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM KSQWQDVIDLNLTGVFL
Sbjct: 3 GGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRMTKSQWQDVIDLNLTGVFL 182
Query: 587 CTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINV 408
CTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKAGVIG TKTVAREYA+RNI
Sbjct: 183 CTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVAREYATRNITA 362
Query: 407 NAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVL 228
NAIAPGFIASDMTA+LG+E+EKKIL TIPLGRYGQPEEVAGLVEFLALNPAA+Y+TGQV
Sbjct: 363 NAIAPGFIASDMTAKLGDEIEKKILQTIPLGRYGQPEEVAGLVEFLALNPAANYITGQVF 542
Query: 227 TIDGGMVM 204
IDGGMVM
Sbjct: 543 NIDGGMVM 566
Score = 205 bits (442), Expect = 6e-052
Identities = 91/189 (48%), Positives = 118/189 (62%)
Frame = +3 / -3
Query: 201 LHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGSHIR 380
LH H S+N ++L+ I +K QEL Q CNFL L+I R G ++FLL +KF SH+
Sbjct: 569 LHNHSSINIENLACDIVGSWIKSQELHQTCNFLRLSIPTQRYGLENFLLNFITKFCSHV* 390
Query: 381 CNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFH 560
N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D+ SL L H
Sbjct: 389 SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYIDDSSLPLLH 210
Query: 561 HYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRLY 740
H F C LCTK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP + F H L
Sbjct: 209 HNFSCCLCTKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKHTLN 30
Query: 741 ISFF*NISS 767
IS *+I S
Sbjct: 29 ISLL*HIPS 3
Score = 162 bits (348), Expect = 5e-039
Identities = 75/170 (44%), Positives = 103/170 (60%)
Frame = -2 / +2
Query: 708 MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQH 529
MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+GK++Q+
Sbjct: 62 MGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEGKSHQY 241
Query: 528 CICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRTWRRA 349
C W WQ S*L SQ S W + C+G+C KY +C+ + ++C +DC+TW
Sbjct: 242 SFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHSSWIYCFRHDCKTW**N 421
Query: 348 *EENLVNHSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGNVR 199
*EEN +H+ +W T GSCR G V G * LY G * R+G V+
Sbjct: 422 *EENSPDHTSG*VWTTGGSCRFGGVLGS*SSCQLYHRPGFQY*WRNGYVK 571
Score = 134 bits (288), Expect(2) = 2e-058
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1 / -1
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPSI+ T PVI*LAAGLRA+NST PATSSG PYLP GMV +IFF AV+S+
Sbjct: 568 YITIPPSILKTWPVI*LAAGLRAKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSE 389
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 388 AINPGAMALAVIFLVAYSLATVLV 317
Score = 112 bits (240), Expect(2) = 2e-058
Identities = 52/87 (59%), Positives = 59/87 (67%)
Frame = +1 / -1
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 262 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 83
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPP 768
S VPH S I STSASF+ SPP
Sbjct: 82 RMSTVPHESITVLNIPSTSASFDISPP 2
>gb|DR164431.1|DR164431 RTFE1_48_H05.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_48_H05_A029 5', mRNA sequence
Length = 852
Score = 377 bits (817), Expect = e-103
Identities = 159/218 (72%), Positives = 183/218 (83%)
Frame = -3 / +3
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 198 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 377
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 378 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 557
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGV 462
K QWQDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKAGV
Sbjct: 558 TKFQWQDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKAGV 737
Query: 461 IGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEEL 348
IG TKTVAREYA+RNI NAIAPGFIASDMTA+LG+E+
Sbjct: 738 IGLTKTVAREYATRNITANAIAPGFIASDMTAKLGDEI 851
Score = 217 bits (469), Expect(2) = 4e-064
Identities = 103/176 (58%), Positives = 118/176 (67%)
Frame = +1 / -3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*+F ILI +VS VIPALFT
Sbjct: 691 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*NFVILIISVSFVIPALFT 512
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
S VPH S I STSASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA
Sbjct: 511 RMSTVPHESITVLNIPSTSASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPA 332
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
P RA+ALPIPL+APVTT TGAS+ + +ACS AT TP D + K
Sbjct: 331 LPSDRAMALPIPLEAPVTTATGASTFLGVSAVACSIDAT*ALTPATWHSDLDLNRK 164
Score = 213 bits (460), Expect = 2e-054
Identities = 97/214 (45%), Positives = 130/214 (60%)
Frame = +3 / -2
Query: 357 SKFGSHIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVD 536
+KF SH+ N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D
Sbjct: 842 TKFCSHV*SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYID 663
Query: 537 NFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI* 716
+ SL L HH F C LCTK+ TS+IQ+N +LPL+F H H CV CN CI+YQ + CSP +
Sbjct: 662 DSSLPLLHHNFSCCLCTKKYTSEIQVNDILPLKFCHSHH*CVLCNTCIVYQDVNCSP*VN 483
Query: 717 SCFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLT 896
F H L IS *+I S + T FNL ++FSL PGIV++NL +C + S+
Sbjct: 482 YRFKHTLNISLL*HIPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFA 303
Query: 897 NPSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHT 998
N SR + N++W F L F +CLFN N+ L T
Sbjct: 302 NSSRSSSYNSHWGFNLFRSFSSCLFN*CNLSLDT 201
Score = 168 bits (362), Expect = 6e-041
Identities = 79/182 (43%), Positives = 110/182 (60%)
Frame = -2 / +2
Query: 903 RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDE 724
R+W +CS SR+ GS +LCPV + G*R D*S WW + L R K *C Y
Sbjct: 296 RNWQSHCSVTR*SRL*GSCELCPVDKGG*RCF*TD*SCWWLSHCLWRGYVKGG*C*GYV* 475
Query: 723 SSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKG 544
+ + MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+G
Sbjct: 476 NGN*LMGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEG 655
Query: 543 KNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCR 364
K++Q+ C W WQ S*L SQ S W + C+G+C KY +C+ + ++C +DC+
Sbjct: 656 KSHQYSFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHSSWIYCFRHDCK 835
Query: 363 TW 358
TW
Sbjct: 836 TW 841
Score = 48.7 bits (100), Expect(2) = 4e-064
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +1 / -3
Query: 367 AVISDAMNPGAIAFTLIFLLAYSLATVFV 453
AV+S+A+NPGA+A +IFL+AYSLATV V
Sbjct: 832 AVMSEAINPGAMALAVIFLVAYSLATVLV 746
>gb|CX646481.1|CX646481 COLD1_9_D05.g1_A029 Root cold Pinus taeda cDNA clone COLD1_9_D05_A029
5', mRNA sequence
Length = 876
Score = 376 bits (815), Expect = e-103
Identities = 158/216 (73%), Positives = 182/216 (84%)
Frame = -3 / +3
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+G++ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 228 AGIKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 407
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 408 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 587
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGV 462
KSQWQDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKAGV
Sbjct: 588 TKSQWQDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKAGV 767
Query: 461 IGFTKTVAREYASRNINVNAIAPGFIASDMTAELGE 354
IG TKTVAREYA+RNI NAIAPGFIASDMTA+LG+
Sbjct: 768 IGLTKTVAREYATRNITANAIAPGFIASDMTAKLGD 875
Score = 217 bits (468), Expect(2) = 5e-064
Identities = 103/176 (58%), Positives = 117/176 (66%)
Frame = +1 / -3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 721 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 542
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
S VPH S I STSASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA
Sbjct: 541 RMSTVPHESITVLNIPSTSASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPA 362
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
P RA+ALPIPL+APVTT TGAS+ + +ACS AT P D + K
Sbjct: 361 LPSDRAMALPIPLEAPVTTATGASTFLGVSAVACSIDAT*ALIPATWHSDLDLNRK 194
Score = 215 bits (463), Expect = 7e-055
Identities = 98/214 (45%), Positives = 130/214 (60%)
Frame = +3 / -2
Query: 357 SKFGSHIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVD 536
+KF SH+ N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D
Sbjct: 872 TKFCSHV*SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYID 693
Query: 537 NFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI* 716
+ SL L HH F C LCTK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP +
Sbjct: 692 DSSLPLLHHNFSCCLCTKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VN 513
Query: 717 SCFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLT 896
F H L IS *+I S + T FNL ++FSL PGIV++NL +C + S+
Sbjct: 512 YRFKHTLNISLL*HIPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFA 333
Query: 897 NPSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHT 998
N SR + N++W F L F +CLFN N+ L T
Sbjct: 332 NSSRSSSYNSHWGFNLFRSFSSCLFN*CNLSLDT 231
Score = 168 bits (362), Expect = 6e-041
Identities = 79/182 (43%), Positives = 110/182 (60%)
Frame = -2 / +2
Query: 903 RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDE 724
R+W +CS SR+ GS +LCPV + G*R D*S WW + L R K *C Y
Sbjct: 326 RNWQSHCSVTR*SRL*GSCELCPVDKGG*RCF*TD*SCWWLSHCLWRGYVKGG*C*GYV* 505
Query: 723 SSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKG 544
+ + MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+G
Sbjct: 506 NGN*LMGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEG 685
Query: 543 KNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCR 364
K++Q+ C W WQ S*L SQ S W + C+G+C KY +C+ + ++C +DC+
Sbjct: 686 KSHQYSFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHSSWIYCFRHDCK 865
Query: 363 TW 358
TW
Sbjct: 866 TW 871
Score = 48.7 bits (100), Expect(2) = 5e-064
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +1 / -3
Query: 367 AVISDAMNPGAIAFTLIFLLAYSLATVFV 453
AV+S+A+NPGA+A +IFL+AYSLATV V
Sbjct: 862 AVMSEAINPGAMALAVIFLVAYSLATVLV 776
>gb|CO366298.1|CO366298 RTK1_27_B10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_B10_A029 3', mRNA sequence
Length = 868
Score = 375 bits (813), Expect = e-103
Identities = 158/215 (73%), Positives = 181/215 (84%)
Frame = -3 / -3
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+G++ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 647 AGIKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 468
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 467 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 288
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGV 462
KSQWQDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKAGV
Sbjct: 287 TKSQWQDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKAGV 108
Query: 461 IGFTKTVAREYASRNINVNAIAPGFIASDMTAELG 357
IG TKTVAREYA+RNI NAIAPGFIASDMTA+LG
Sbjct: 107 IGLTKTVAREYATRNITANAIAPGFIASDMTAKLG 3
Score = 217 bits (468), Expect(2) = 5e-064
Identities = 103/176 (58%), Positives = 117/176 (66%)
Frame = +1 / +1
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 154 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 333
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
S VPH S I STSASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA
Sbjct: 334 RMSTVPHESITVLNIPSTSASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPA 513
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
P RA+ALPIPL+APVTT TGAS+ + +ACS AT P D + K
Sbjct: 514 LPSDRAMALPIPLEAPVTTATGASTFLGVSAVACSIDAT*ALIPATWHSDLDLNRK 681
Score = 215 bits (463), Expect = 7e-055
Identities = 98/214 (45%), Positives = 130/214 (60%)
Frame = +3 / +3
Query: 357 SKFGSHIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVD 536
+KF SH+ N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D
Sbjct: 3 TKFCSHV*SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYID 182
Query: 537 NFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI* 716
+ SL L HH F C LCTK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP +
Sbjct: 183 DSSLPLLHHNFSCCLCTKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VN 362
Query: 717 SCFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLT 896
F H L IS *+I S + T FNL ++FSL PGIV++NL +C + S+
Sbjct: 363 YRFKHTLNISLL*HIPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFA 542
Query: 897 NPSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHT 998
N SR + N++W F L F +CLFN N+ L T
Sbjct: 543 NSSRSSSYNSHWGFNLFRSFSSCLFN*CNLSLDT 644
Score = 168 bits (362), Expect = 6e-041
Identities = 79/182 (43%), Positives = 110/182 (60%)
Frame = -2 / -2
Query: 903 RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDE 724
R+W +CS SR+ GS +LCPV + G*R D*S WW + L R K *C Y
Sbjct: 549 RNWQSHCSVTR*SRL*GSCELCPVDKGG*RCF*TD*SCWWLSHCLWRGYVKGG*C*GYV* 370
Query: 723 SSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKG 544
+ + MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+G
Sbjct: 369 NGN*LMGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEG 190
Query: 543 KNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCR 364
K++Q+ C W WQ S*L SQ S W + C+G+C KY +C+ + ++C +DC+
Sbjct: 189 KSHQYSFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHSSWIYCFRHDCK 10
Query: 363 TW 358
TW
Sbjct: 9 TW 4
Score = 48.7 bits (100), Expect(2) = 5e-064
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +1 / +1
Query: 367 AVISDAMNPGAIAFTLIFLLAYSLATVFV 453
AV+S+A+NPGA+A +IFL+AYSLATV V
Sbjct: 13 AVMSEAINPGAMALAVIFLVAYSLATVLV 99
>gb|CX648630.1|CX648630 COLD1_29_H09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_29_H09_A029 5', mRNA sequence
Length = 714
Score = 373 bits (808), Expect = e-102
Identities = 158/214 (73%), Positives = 180/214 (84%)
Frame = -3 / +2
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 71 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 250
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 251 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 430
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGV 462
KSQWQDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKAGV
Sbjct: 431 TKSQWQDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKAGV 610
Query: 461 IGFTKTVAREYASRNINVNAIAPGFIASDMTAEL 360
IG TKTVAREYA+RNI NAIAPGFIASDMTA+L
Sbjct: 611 IGLTKTVAREYATRNITANAIAPGFIASDMTAKL 712
Score = 220 bits (474), Expect(2) = 8e-065
Identities = 104/176 (59%), Positives = 118/176 (67%)
Frame = +1 / -1
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 564 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 385
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
S VPH S I STSASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA
Sbjct: 384 RMSTVPHESITVLNIPSTSASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPA 205
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
P RA+ALPIPL+APVTT TGAS+ + +ACS AT TP D + K
Sbjct: 204 LPSDRAMALPIPLEAPVTTATGASTFLGVSAVACSIDAT*ALTPATWHSDLDLNRK 37
Score = 214 bits (462), Expect = 1e-054
Identities = 98/213 (46%), Positives = 129/213 (60%)
Frame = +3 / -3
Query: 360 KFGSHIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDN 539
KF SH+ N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D+
Sbjct: 712 KFCSHV*SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYIDD 533
Query: 540 FSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*S 719
SL L HH F C LCTK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP +
Sbjct: 532 SSLPLLHHNFSCCLCTKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNY 353
Query: 720 CFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTN 899
F H L IS *+I S + T FNL ++FSL PGIV++NL +C + S+ N
Sbjct: 352 RFKHTLNISLL*HIPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFAN 173
Query: 900 PSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHT 998
SR + N++W F L F +CLFN N+ L T
Sbjct: 172 SSRSSSYNSHWGFNLFRSFSSCLFN*CNLSLDT 74
Score = 168 bits (362), Expect = 6e-041
Identities = 79/182 (43%), Positives = 110/182 (60%)
Frame = -2 / +1
Query: 903 RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDE 724
R+W +CS SR+ GS +LCPV + G*R D*S WW + L R K *C Y
Sbjct: 169 RNWQSHCSVTR*SRL*GSCELCPVDKGG*RCF*TD*SCWWLSHCLWRGYVKGG*C*GYV* 348
Query: 723 SSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKG 544
+ + MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+G
Sbjct: 349 NGN*LMGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEG 528
Query: 543 KNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCR 364
K++Q+ C W WQ S*L SQ S W + C+G+C KY +C+ + ++C +DC+
Sbjct: 529 KSHQYSFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHSSWIYCFRHDCK 708
Query: 363 TW 358
TW
Sbjct: 709 TW 714
Score = 48.7 bits (100), Expect(2) = 8e-065
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +1 / -1
Query: 367 AVISDAMNPGAIAFTLIFLLAYSLATVFV 453
AV+S+A+NPGA+A +IFL+AYSLATV V
Sbjct: 705 AVMSEAINPGAMALAVIFLVAYSLATVLV 619
>gb|DR387160.1|DR387160 RTHG1_19_H02.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_19_H02_A029 5', mRNA sequence
Length = 817
Score = 359 bits (779), Expect = 2e-098
Identities = 152/207 (73%), Positives = 173/207 (83%)
Frame = -3 / +2
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 197 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 376
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 377 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 556
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGV 462
KSQWQDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKAGV
Sbjct: 557 TKSQWQDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKAGV 736
Query: 461 IGFTKTVAREYASRNINVNAIAPGFIA 381
IG TKTVAREYA+RNI NAIAPGFIA
Sbjct: 737 IGLTKTVAREYATRNITANAIAPGFIA 817
Score = 220 bits (474), Expect(2) = 9e-063
Identities = 104/176 (59%), Positives = 118/176 (67%)
Frame = +1 / -2
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 690 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 511
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
S VPH S I STSASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA
Sbjct: 510 RMSTVPHESITVLNIPSTSASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPA 331
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
P RA+ALPIPL+APVTT TGAS+ + +ACS AT TP D + K
Sbjct: 330 LPSDRAMALPIPLEAPVTTATGASTFLGVSAVACSIDAT*ALTPATWHSDLDLNRK 163
Score = 206 bits (444), Expect = 3e-052
Identities = 93/198 (46%), Positives = 122/198 (61%)
Frame = +3 / -1
Query: 405 IHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFHHYFCCSLC 584
I DIS+ I P N + N+S GC +ISL IAS+TN+R +D+ SL L HH F C LC
Sbjct: 793 IGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYIDDSSLPLLHHNFSCCLC 614
Query: 585 TKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRLYISFF*NIS 764
TK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP + F H L IS *+I
Sbjct: 613 TKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKHTLNISLL*HIP 434
Query: 765 SEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQL 944
S + T FNL ++FSL PGIV++NL +C + S+ N SR + N++W F L
Sbjct: 433 SINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFANSSRSSSYNSHWGFNL 254
Query: 945 GSIFYNCLFNSGNMGLHT 998
F +CLFN N+ L T
Sbjct: 253 FRSFSSCLFN*CNLSLDT 200
Score = 154 bits (331), Expect = 1e-036
Identities = 75/174 (43%), Positives = 104/174 (59%)
Frame = -2 / +1
Query: 903 RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDE 724
R+W +CS SR+ GS +LCPV + G*R D*S WW + L R K *C Y
Sbjct: 295 RNWQSHCSVTR*SRL*GSCELCPVDKGG*RCF*TD*SCWWLSHCLWRGYVKGG*C*GYV* 474
Query: 723 SSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKG 544
+ + MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+G
Sbjct: 475 NGN*LMGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEG 654
Query: 543 KNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHC 382
K++Q+ C W WQ S*L SQ S W + C+G+C KY +C+ + ++C
Sbjct: 655 KSHQYSFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHSSWIYC 816
Score = 41.8 bits (85), Expect(2) = 9e-063
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1 / -2
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 816 AINPGAMALAVIFLVAYSLATVLV 745
>gb|DT638793.1|DT638793 EST1153724 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHJ54 3' end, mRNA sequence
Length = 874
Score = 265 bits (573), Expect(3) = 2e-095
Identities = 108/129 (83%), Positives = 120/129 (93%)
Frame = -3 / +3
Query: 731 MMKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKK 552
M K +D WGT+D+LVNNAGIT+DTL+MRM KSQWQDVIDLNLTGVFLCTQAA KVMMKK
Sbjct: 486 MFKTVIDSWGTVDILVNNAGITKDTLMMRMTKSQWQDVIDLNLTGVFLCTQAAAKVMMKK 665
Query: 551 RKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
RKG++INIASVVGLTGN+GQANYSAAKAGVIG TKTVAREYA+RNI NAIAPGFIASDM
Sbjct: 666 RKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVAREYATRNITANAIAPGFIASDM 845
Query: 371 TAELGEELE 345
TA+LG+E+E
Sbjct: 846 TAKLGDEIE 872
Score = 149 bits (321), Expect(3) = 6e-064
Identities = 63/129 (48%), Positives = 81/129 (62%)
Frame = +3 / -3
Query: 345 LKLFSKFGSHIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYR 524
L +KF SH+ N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R
Sbjct: 872 LNFITKFCSHV*SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHR 693
Query: 525 CNVDNFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCS 704
+D+ SL L HH F C LCTK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CS
Sbjct: 692 SYIDDSSLPLLHHNFSCCLCTKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCS 513
Query: 705 PFI*SCFHH 731
P + F H
Sbjct: 512 P*VNYRFKH 486
Score = 130 bits (279), Expect(2) = 4e-033
Identities = 53/117 (45%), Positives = 76/117 (64%)
Frame = -2 / +2
Query: 708 MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQH 529
MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+GK++Q+
Sbjct: 509 MGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEGKSHQY 688
Query: 528 CICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRTW 358
C W WQ S*L SQ S W + C+G+C KY +C+ + ++C +DC+TW
Sbjct: 689 SFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHSSWIYCFRHDCKTW 859
Score = 95.5 bits (202), Expect(3) = 6e-064
Identities = 44/76 (57%), Positives = 51/76 (67%)
Frame = +1 / -1
Query: 808 ETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATW 987
+TSSASF DRA*FTRTL PA P RA+ALPIPL+APVTT TGAS+ + +ACS AT
Sbjct: 409 KTSSASFIDRA*FTRTLQPALPSDRAMALPIPLEAPVTTATGASTFLGVSAVACSIDAT* 230
Query: 988 VCTPENPRPDRSVGEK 1035
TP D + K
Sbjct: 229 ALTPATWHSDLDLNRK 182
Score = 93.2 bits (197), Expect(3) = 6e-039
Identities = 42/69 (60%), Positives = 48/69 (69%)
Frame = +1 / -1
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 709 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 530
Query: 688 STSIVPHLS 714
S VPH S
Sbjct: 529 RMSTVPHES 503
Score = 75.3 bits (158), Expect(3) = 2e-095
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = -3 / +3
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 216 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 395
Query: 821 AEEV 810
AE+V
Sbjct: 396 AEDV 407
Score = 57.4 bits (119), Expect(3) = 6e-039
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +3 / -3
Query: 810 DLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQLGSIFYNCLFNSGNMG 989
++FSL PGIV++NL +C + S+ N SR + N++W F L F +CLFN N+
Sbjct: 407 NIFSLLYRPGIVHKNLTACST**QSNGFANSSRSSSYNSHWGFNLFRSFSSCLFN*CNLS 228
Query: 990 LHT 998
L T
Sbjct: 227 LDT 219
Score = 49.6 bits (102), Expect(3) = 6e-039
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1 / -1
Query: 343 FXXXXXXXAVISDAMNPGAIAFTLIFLLAYSLATVFV 453
F AV+S+A+NPGA+A +IFL+AYSLATV V
Sbjct: 874 FSISSPSFAVMSEAINPGAMALAVIFLVAYSLATVLV 764
Score = 49.2 bits (101), Expect(3) = 2e-095
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -3 / +1
Query: 809 SKEIEASGGEAITFGGDVSKEADVESMMK 723
S++IEA+GG AI +GGD+SKEADVE +K
Sbjct: 409 SRQIEAAGGSAIVYGGDMSKEADVEVCLK 495
Score = 39.1 bits (79), Expect(3) = 6e-064
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 736 STSASFETSPPKVIASPPDASISLE 810
STSASF+ SPP +A PP ASI LE
Sbjct: 482 STSASFDISPP*TMAEPPAASICLE 408
Score = 31.8 bits (63), Expect(2) = 4e-033
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2 / +2
Query: 903 RDW*GNCSSPWKSRMQGSGKLCPVLERG*R 814
R+W +CS SR+ GS +LCPV + G*R
Sbjct: 314 RNWQSHCSVTR*SRL*GSCELCPVDKGG*R 403
>gb|DR691467.1|DR691467 EST1081554 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAD876 3' end, mRNA sequence
Length = 854
Score = 316 bits (685), Expect = 2e-085
Identities = 134/187 (71%), Positives = 154/187 (82%)
Frame = -3 / +2
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 293 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 472
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 473 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 652
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGV 462
KSQWQDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKA V
Sbjct: 653 TKSQWQDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKARV 832
Query: 461 IGFTKTV 441
IG TKTV
Sbjct: 833 IGLTKTV 853
Score = 218 bits (471), Expect(2) = 2e-056
Identities = 103/176 (58%), Positives = 118/176 (67%)
Frame = +1 / -3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 786 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 607
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
S VPH S + STSASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA
Sbjct: 606 RMSTVPHESITVLNMPSTSASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPA 427
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
P RA+ALPIPL+APVTT TGAS+ + +ACS AT TP D + K
Sbjct: 426 LPSDRAMALPIPLEAPVTTATGASTFLGVSAVACSIDAT*ALTPATWHSDLDLNRK 259
Score = 196 bits (423), Expect = 2e-049
Identities = 87/186 (46%), Positives = 115/186 (61%)
Frame = +3 / -2
Query: 441 NCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFHHYFCCSLCTKEDTSKIQINY 620
N + N+S GC +ISL IAS+TN+R +D+ SL L HH F C LCTK+ TS+IQ+N
Sbjct: 853 NSLSQPNNSCFGCTVISLPYIASQTNHRSYIDDSSLPLLHHNFSCCLCTKKYTSEIQVND 674
Query: 621 VLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRLYISFF*NISSEGDSLTTRCFN 800
+LPLRF H H CV CN CI+YQ + CSP + F H L IS *+I S + T FN
Sbjct: 673 ILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKHALNISLL*HIPSINNG*ATSSFN 494
Query: 801 LFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQLGSIFYNCLFNSG 980
L ++FSL PGIV++NL +C + S+ N SR + N++W F L F +CLFN
Sbjct: 493 LSRNIFSLLYRPGIVHKNLTACST**QSNGFANSSRSSSYNSHWGFNLFRSFSSCLFN*C 314
Query: 981 NMGLHT 998
N+ L T
Sbjct: 313 NLSLDT 296
Score = 93.6 bits (198), Expect(2) = 1e-026
Identities = 42/84 (50%), Positives = 55/84 (65%)
Frame = -2 / +1
Query: 708 MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQH 529
MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+GK++Q+
Sbjct: 586 MGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEGKSHQY 765
Query: 528 CICSWSYWQCWPS*L*RSQGWSDW 457
C W WQ S*L SQ S W
Sbjct: 766 SFCGWFDWQYRAS*LQCSQSTSYW 837
Score = 46.9 bits (96), Expect(2) = 1e-026
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = -2 / +1
Query: 903 RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*C 739
R+W +CS SR+ GS +LCPV + G*R D*S WW + L R K *C
Sbjct: 391 RNWQSHCSVTR*SRL*GSCELCPVDKGG*RCF*TD*SCWWLSHCLWRGYVKGG*C 555
Score = 22.1 bits (42), Expect(2) = 2e-056
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2 / -1
Query: 473 WLRYN*LGQHCQ*DQLQ 523
WL N*L +CQ +Q Q
Sbjct: 821 WLHCN*LALYCQSNQPQ 771
>gb|DR387088.1|DR387088 RTHG1_19_H02.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_19_H02_A029 3', mRNA sequence
Length = 862
Score = 313 bits (678), Expect = 2e-084
Identities = 132/149 (88%), Positives = 141/149 (94%)
Frame = -3 / +1
Query: 650 MRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAK 471
MRM KSQWQDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAK
Sbjct: 1 MRMTKSQWQDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAK 180
Query: 470 AGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEEV 291
AGVIG TKTVAREYA+RNI NAIAPGFIASDMTA+LG+E+EKKIL TIPLGRYGQPEEV
Sbjct: 181 AGVIGLTKTVAREYATRNITANAIAPGFIASDMTAKLGDEIEKKILQTIPLGRYGQPEEV 360
Query: 290 AGLVEFLALNPAASYMTGQVLTIDGGMVM 204
AGLVEFLALNPAA+Y+TGQV IDGGMVM
Sbjct: 361 AGLVEFLALNPAANYITGQVFNIDGGMVM 447
Score = 164 bits (352), Expect = 1e-039
Identities = 72/150 (48%), Positives = 95/150 (63%)
Frame = +3 / -2
Query: 201 LHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGSHIR 380
LH H S+N ++L+ I +K QEL Q CNFL L+I R G ++FLL +KF SH+
Sbjct: 450 LHNHSSINIENLACDIVGSWIKSQELHQTCNFLRLSIPTQRYGLENFLLNFITKFCSHV* 271
Query: 381 CNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFH 560
N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D+ SL L H
Sbjct: 270 SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYIDDSSLPLLH 91
Query: 561 HYFCCSLCTKEDTSKIQINYVLPLRFLHPH 650
H F C LCTK+ TS+IQ+N +LPLRF H H
Sbjct: 90 HNFSCCLCTKKYTSEIQVNDILPLRFCHSH 1
Score = 143 bits (306), Expect = 3e-033
Identities = 65/150 (43%), Positives = 92/150 (61%)
Frame = -2 / +3
Query: 648 EDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQHCICSWSYWQCWPS*L*RSQG 469
E+++ISVA +* ES+WC+ LYTG + S DE+E+GK++Q+ C W WQ S*L SQ
Sbjct: 3 ENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEGKSHQYSFCGWFDWQYRAS*LQCSQS 182
Query: 468 WSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRTWRRA*EENLVNHSVREIWPTRGSC 289
S W + C+G+C KY +C+ + ++C +DC+TW *EEN +H+ +W T GSC
Sbjct: 183 RSYWAD*DCCKGICH*KYHSQCHSSWIYCFRHDCKTW**N*EENSPDHTSG*VWTTGGSC 362
Query: 288 RVGRVPGP*PRS*LYDWTGAYN*RRDGNVR 199
R G V G * LY G * R+G V+
Sbjct: 363 RFGGVLGS*SSCQLYHRPGFQY*WRNGYVK 452
Score = 134 bits (288), Expect(2) = 4e-044
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1 / -3
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPSI+ T PVI*LAAGLRA+NST PATSSG PYLP GMV +IFF AV+S+
Sbjct: 449 YITIPPSILKTWPVI*LAAGLRAKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSE 270
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 269 AINPGAMALAVIFLVAYSLATVLV 198
Score = 64.8 bits (135), Expect(2) = 4e-044
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +1 / -3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFIL 648
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF IL
Sbjct: 143 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVIL 3
>gb|DR056578.1|DR056578 RTCA1_31_E11.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_31_E11_A029 3', mRNA sequence
Length = 615
Score = 296 bits (641), Expect = 2e-079
Identities = 124/175 (70%), Positives = 144/175 (82%)
Frame = -3 / -3
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 526 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 347
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 346 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 167
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSA 477
KSQWQDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSA
Sbjct: 166 TKSQWQDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSA 2
Score = 220 bits (474), Expect = 2e-056
Identities = 104/176 (59%), Positives = 118/176 (67%)
Frame = +1 / +3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 33 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFT 212
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
S VPH S I STSASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA
Sbjct: 213 RMSTVPHESITVLNIPSTSASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPA 392
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
P RA+ALPIPL+APVTT TGAS+ + +ACS AT TP D + K
Sbjct: 393 LPSDRAMALPIPLEAPVTTATGASTFLGVSAVACSIDAT*ALTPATWHSDLDLNRK 560
Score = 187 bits (402), Expect = 2e-046
Identities = 83/174 (47%), Positives = 109/174 (62%)
Frame = +3 / +2
Query: 477 CAIISLANIASKTNYRCNVDNFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQ 656
C +ISL IAS+TN+R +D+ SL L HH F C LCTK+ TS+IQ+N +LPLRF H H
Sbjct: 2 CTVISLPYIASQTNHRSYIDDSSLPLLHHNFSCCLCTKKYTSEIQVNDILPLRFCHSHH* 181
Query: 657 CVSCNPCIIYQHIYCSPFI*SCFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGP 836
CV CN CI+YQ + CSP + F H L IS *+I S + T FNL ++FSL P
Sbjct: 182 CVLCNTCIVYQDVNCSP*VNYRFKHTLNISLL*HIPSINNG*ATSSFNLSRNIFSLLYRP 361
Query: 837 GIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHT 998
GIV++NL +C + S+ N SR + N++W F L F +CLFN N+ L T
Sbjct: 362 GIVHKNLTACST**QSNGFANSSRSSSYNSHWGFNLFRSFSSCLFN*CNLSLDT 523
Score = 126 bits (269), Expect = 4e-028
Identities = 64/140 (45%), Positives = 85/140 (60%)
Frame = -2 / -2
Query: 903 RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDE 724
R+W +CS SR+ GS +LCPV + G*R D*S WW + L R K *C Y
Sbjct: 428 RNWQSHCSVTR*SRL*GSCELCPVDKGG*RCF*TD*SCWWLSHCLWRGYVKGG*C*GYV* 249
Query: 723 SSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKG 544
+ + MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+G
Sbjct: 248 NGN*LMGNS*HPGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEG 69
Query: 543 KNYQHCICSWSYWQCWPS*L 484
K++Q+ C W WQ S*L
Sbjct: 68 KSHQYSFCGWFDWQYRAS*L 9
>gb|DR068729.1|DR068729 RTDK1_2_C05.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_2_C05_A029 5', mRNA sequence
Length = 778
Score = 295 bits (639), Expect = 4e-079
Identities = 125/141 (88%), Positives = 134/141 (95%)
Frame = -3 / -2
Query: 626 QDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTK 447
QDVIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKAGVIG TK
Sbjct: 777 QDVIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTK 598
Query: 446 TVAREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLA 267
TVAREYA+RNI NAIAPGFIASDMTA+LG+E+EKKIL TIPLGRYGQPEEVAGLVEFLA
Sbjct: 597 TVAREYATRNITANAIAPGFIASDMTAKLGDEIEKKILQTIPLGRYGQPEEVAGLVEFLA 418
Query: 266 LNPAASYMTGQVLTIDGGMVM 204
LNPAA+Y+TGQV IDGGMVM
Sbjct: 417 LNPAANYITGQVFNIDGGMVM 355
Score = 147 bits (316), Expect = 1e-034
Identities = 66/142 (46%), Positives = 89/142 (62%)
Frame = +3 / +1
Query: 201 LHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGSHIR 380
LH H S+N ++L+ I +K QEL Q CNFL L+I R G ++FLL +KF SH+
Sbjct: 352 LHNHSSINIENLACDIVGSWIKSQELHQTCNFLRLSIPTQRYGLENFLLNFITKFCSHV* 531
Query: 381 CNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFH 560
N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D+ SL L H
Sbjct: 532 SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYIDDSSLPLLH 711
Query: 561 HYFCCSLCTKEDTSKIQINYVL 626
H F C LCTK+ TS+IQ+N +L
Sbjct: 712 HNFSCCLCTKKYTSEIQVNDIL 777
Score = 134 bits (288), Expect(2) = 2e-040
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1 / +2
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPSI+ T PVI*LAAGLRA+NST PATSSG PYLP GMV +IFF AV+S+
Sbjct: 353 YITIPPSILKTWPVI*LAAGLRAKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSE 532
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 533 AINPGAMALAVIFLVAYSLATVLV 604
Score = 133 bits (286), Expect = 2e-030
Identities = 59/137 (43%), Positives = 82/137 (59%)
Frame = -2 / -1
Query: 609 ESYWCLPLYTGCNKSNDEKEKGKNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGV 430
ES+WC+ LYTG + S DE+E+GK++Q+ C W WQ S*L SQ S W + C+G+
Sbjct: 760 ESHWCISLYTGSS*SYDEEEEGKSHQYSFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGI 581
Query: 429 CKQKYQCECYCTRVHCI*YDCRTWRRA*EENLVNHSVREIWPTRGSCRVGRVPGP*PRS* 250
C KY +C+ + ++C +DC+TW *EEN +H+ +W T GSCR G V G *
Sbjct: 580 CH*KYHSQCHSSWIYCFRHDCKTW**N*EENSPDHTSG*VWTTGGSCRFGGVLGS*SSCQ 401
Query: 249 LYDWTGAYN*RRDGNVR 199
LY G * R+G V+
Sbjct: 400 LYHRPGFQY*WRNGYVK 350
Score = 51.9 bits (107), Expect(2) = 2e-040
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +2
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSC 627
V+PTT+A+ T AACVQR TPVRF+S+TSC
Sbjct: 659 VKPTTEAILMTLPFLFFIITLAAACVQRNTPVRFKSMTSC 778
>gb|DR089313.1|DR089313 RTAL1_7_H09.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_7_H09_A029 5', mRNA sequence
Length = 511
Score = 284 bits (615), Expect = 8e-076
Identities = 121/139 (87%), Positives = 130/139 (93%)
Frame = -3 / +3
Query: 620 VIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTV 441
VIDLNLTGVFLCTQAA KVMMKKRKG++INIASVVGLTGN+GQANYSAAKAGVIG TKTV
Sbjct: 3 VIDLNLTGVFLCTQAAAKVMMKKRKGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTV 182
Query: 440 AREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALN 261
AREYA+RNI NAIAPGFIASDMTA+LG+E+EKKIL TIPLGRYGQPEEVAGLVEFL LN
Sbjct: 183 AREYATRNITANAIAPGFIASDMTAKLGDEIEKKILQTIPLGRYGQPEEVAGLVEFLVLN 362
Query: 260 PAASYMTGQVLTIDGGMVM 204
PAA+Y+T QV IDGGMVM
Sbjct: 363 PAANYITCQVFNIDGGMVM 419
Score = 144 bits (310), Expect = 9e-034
Identities = 65/139 (46%), Positives = 87/139 (62%)
Frame = +3 / -3
Query: 201 LHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGSHIR 380
LH H S+N ++L+ I +K QEL Q CNFL L+I R G ++FLL +KF SH+
Sbjct: 422 LHNHSSINIENLACDIVGSWIKNQELHQTCNFLRLSIPTQRYGLENFLLNFITKFCSHV* 243
Query: 381 CNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFH 560
N+ I DIS+ I P N + N+S GC +ISL IAS+TN+R +D+ SL L H
Sbjct: 242 SNKSRSYGIGCDISSGIFPCNSLSQPNNSCFGCTVISLPYIASQTNHRSYIDDSSLPLLH 63
Query: 561 HYFCCSLCTKEDTSKIQIN 617
H F C LCTK+ TS+IQ+N
Sbjct: 62 HNFRCCLCTKKYTSEIQVN 6
Score = 137 bits (293), Expect = 2e-031
Identities = 59/137 (43%), Positives = 83/137 (60%)
Frame = -2 / +2
Query: 609 ESYWCLPLYTGCNKSNDEKEKGKNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGV 430
ES+WC+ LYTG ++S DE+E+GK++Q+ C W WQ S*L SQ S W + C+G+
Sbjct: 14 ESHWCISLYTGSSESYDEEEEGKSHQYSFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGI 193
Query: 429 CKQKYQCECYCTRVHCI*YDCRTWRRA*EENLVNHSVREIWPTRGSCRVGRVPGP*PRS* 250
C KY +C+ + ++C +DC+TW *EEN +H+ +W T GSCR G V G *
Sbjct: 194 CH*KYHSQCHSSWIYCFRHDCKTW**N*EENSPDHTSG*VWTTGGSCRFGGVLGS*SSCQ 373
Query: 249 LYDWTGAYN*RRDGNVR 199
LY G * R+G V+
Sbjct: 374 LYHMPGFQY*WRNGYVK 424
Score = 128 bits (275), Expect(2) = 1e-037
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = +1 / -1
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPSI+ T VI*LAAGLR +NST PATSSG PYLP GMV +IFF AV+S+
Sbjct: 421 YITIPPSILKTWHVI*LAAGLRTKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSE 242
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 241 AINPGAMALAVIFLVAYSLATVLV 170
Score = 48.7 bits (100), Expect(2) = 1e-037
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1 / -1
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSIT 621
V+PTT+A+ TF AACVQR TPVRF+S+T
Sbjct: 115 VKPTTEAILMTLPFLFFIITFAAACVQRNTPVRFKSMT 2
>gb|DR690147.1|DR690147 EST1080233 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACR63 3' end, mRNA sequence
Length = 777
Score = 243 bits (524), Expect = 3e-063
Identities = 102/150 (68%), Positives = 119/150 (79%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 328 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 507
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 508 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 687
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKK 552
KSQWQDVIDLNLTGVFLCTQAA KVMMKK
Sbjct: 688 TKSQWQDVIDLNLTGVFLCTQAAAKVMMKK 777
Score = 211 bits (455), Expect = 9e-054
Identities = 99/157 (63%), Positives = 110/157 (70%)
Frame = +1 / -2
Query: 565 TFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFTSTSIVPHLSRAAFIIDSTS 744
T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT S VPH S I STS
Sbjct: 764 TLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFTRMSTVPHESITVLNIPSTS 585
Query: 745 ASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTT 924
ASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA P RA+ALPIPL+APVTT
Sbjct: 584 ASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPALPSDRAMALPIPLEAPVTT 405
Query: 925 TTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
TGAS+ + +ACS AT TP D + K
Sbjct: 404 ATGASTFLGVSAVACSIDAT*ALTPATWHSDLDLNRK 294
Score = 157 bits (337), Expect = 2e-037
Identities = 70/149 (46%), Positives = 91/149 (61%)
Frame = +3 / -1
Query: 552 LFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHH 731
L HH F C LCTK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP + F H
Sbjct: 777 LLHHNFSCCLCTKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKH 598
Query: 732 RLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRC 911
L IS *+I S + T FNL ++FSL PGIV++NL +C + S+ N SR
Sbjct: 597 TLNISLL*HIPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFANSSRS 418
Query: 912 TCNNNNWSFQLGSIFYNCLFNSGNMGLHT 998
+ N++W F L F +CLFN N+ L T
Sbjct: 417 SSYNSHWGFNLFRSFGSCLFN*CNLSLDT 331
>gb|DR386680.1|DR386680 RTHG1_16_F06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_16_F06_A029 5', mRNA sequence
Length = 672
Score = 237 bits (513), Expect = 9e-062
Identities = 99/148 (66%), Positives = 117/148 (79%)
Frame = -3 / +2
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+G++ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 227 AGIKAQVASIEQATAETLKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 406
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 407 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 586
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMM 558
KSQWQDVIDLNLTGVFLCTQAA KVMM
Sbjct: 587 TKSQWQDVIDLNLTGVFLCTQAAAKVMM 670
Score = 208 bits (448), Expect = 8e-053
Identities = 98/157 (62%), Positives = 109/157 (69%)
Frame = +1 / -1
Query: 565 TFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFTSTSIVPHLSRAAFIIDSTS 744
T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT S VPH S I STS
Sbjct: 663 TLAAACVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFTRMSTVPHESITVLNIPSTS 484
Query: 745 ASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTT 924
ASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA P RA+ALPIPL+APVTT
Sbjct: 483 ASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPALPSDRAMALPIPLEAPVTT 304
Query: 925 TTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
TGAS+ + +ACS AT P D + K
Sbjct: 303 ATGASTFLRVSAVACSIDAT*ALIPATWHSDLDLNRK 193
Score = 156 bits (335), Expect = 3e-037
Identities = 69/147 (46%), Positives = 90/147 (61%)
Frame = +3 / -3
Query: 558 HHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRL 737
HH F C LCTK+ TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP + F H L
Sbjct: 670 HHNFSCCLCTKKYTSEIQVNDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKHTL 491
Query: 738 YISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTC 917
IS *+I S + T FNL ++FSL PGIV++NL +C + S+ N SR +
Sbjct: 490 NISLL*HIPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFANSSRSSS 311
Query: 918 NNNNWSFQLGSIFYNCLFNSGNMGLHT 998
N++W F L F +CLFN N+ L T
Sbjct: 310 YNSHWGFNLFKSFSSCLFN*CNLSLDT 230
>gb|BX678759.1|BX678759 BX678759 RS Pinus pinaster cDNA clone RS14G05, mRNA sequence
Length = 395
Score = 235 bits (508), Expect = 4e-061
Identities = 96/114 (84%), Positives = 105/114 (92%)
Frame = -3 / +3
Query: 728 MKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKR 549
+KA +D WGT+D+LVNNAGITRDTL+MRM KSQWQDVIDLNLTGV LCTQAA KVMMKKR
Sbjct: 54 LKAVIDSWGTVDILVNNAGITRDTLMMRMTKSQWQDVIDLNLTGVSLCTQAAAKVMMKKR 233
Query: 548 KGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGF 387
KG++INIASVVGLTGN+GQANYSA KAGVIG TKTVAREYA+RNI NAIAPGF
Sbjct: 234 KGRVINIASVVGLTGNIGQANYSAVKAGVIGLTKTVAREYATRNITANAIAPGF 395
Score = 138 bits (295), Expect = 1e-031
Identities = 55/104 (52%), Positives = 68/104 (65%)
Frame = +3 / -1
Query: 396 CNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFHHYFCC 575
C I DIS+ I P N + N+S C +ISL IAS+TN+R +D+ SL L HH F C
Sbjct: 386 CYGIGCDISSGIFPCNSLSQPNNSCFDCTVISLPYIASQTNHRSYIDDSSLPLLHHNFSC 207
Query: 576 SLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSP 707
LCTK TS+IQ+N +LPLRF H H CV CN CI+YQ + CSP
Sbjct: 206 CLCTKRYTSEIQVNDILPLRFCHSHH*CVPCNTCIVYQDVNCSP 75
Score = 113 bits (241), Expect = 3e-024
Identities = 49/105 (46%), Positives = 67/105 (63%)
Frame = -2 / +2
Query: 708 MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQH 529
MGN+ GK CR Y H DE+++ISVA +* ES+WC+ LYTG + S DE+E+GK++Q+
Sbjct: 74 MGNS*HLGKQCRYYKGHTNDENDKISVAGCH*LESHWCISLYTGSS*SYDEEEEGKSHQY 253
Query: 528 CICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCT 394
C W WQ S*L SQ S W + C+G+C KY +C+ T
Sbjct: 254 SFCGWFDWQYRAS*LQCSQSRSYWAD*DCCKGICH*KYHSQCHST 388
Score = 96.8 bits (205), Expect(2) = 3e-025
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = +1 / -2
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
V+PTT+A+ T AACVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT
Sbjct: 274 VKPTTEAILMTLPFLFFIITLAAACVQRDTPVRFKSMTSCH*DFVILIISVSLVIPALFT 95
Query: 688 STSIVPHLSRAAF 726
S VPH S AF
Sbjct: 94 KMSTVPHESITAF 56
Score = 39.6 bits (80), Expect(2) = 3e-025
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1 / -2
Query: 388 NPGAIAFTLIFLLAYSLATVFV 453
NPGA+A +IFL+AYSLATV V
Sbjct: 394 NPGAMALAVIFLVAYSLATVLV 329
>gb|DT636058.1|DT636058 EST1150989 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGN56 3' end, mRNA sequence
Length = 808
Score = 224 bits (484), Expect = 9e-058
Identities = 94/145 (64%), Positives = 111/145 (76%)
Frame = -3 / +3
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 336 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 515
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE+VS++IEA+GG AI +GGD+SKEADVE M K +D WGT+D+LVNNAGIT+DTL+MRM
Sbjct: 516 AEDVSRQIEAAGGSAIVYGGDMSKEADVEGMFKTVIDSWGTVDILVNNAGITKDTLMMRM 695
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATK 567
KSQW DVIDLNLTGVFLCTQ K
Sbjct: 696 TKSQWHDVIDLNLTGVFLCTQQQLK 770
Score = 207 bits (446), Expect = 2e-052
Identities = 97/156 (62%), Positives = 108/156 (69%)
Frame = +1 / -1
Query: 568 FVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFTSTSIVPHLSRAAFIIDSTSA 747
F CVQR TPVRF+S+TSCH*DF ILI +VS VIPALFT S VPH S I STSA
Sbjct: 769 FSCCCVQRNTPVRFKSMTSCH*DFVILIISVSFVIPALFTRMSTVPHESITVLNIPSTSA 590
Query: 748 SFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTT 927
SF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA P RA+ALPIPL+APVTT
Sbjct: 589 SFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPALPSDRAMALPIPLEAPVTTA 410
Query: 928 TGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
TGAS+ + +ACS AT TP D + K
Sbjct: 409 TGASTFLGVSAVACSIDAT*ALTPATWHSDLDLNRK 302
Score = 141 bits (303), Expect = 8e-033
Identities = 64/140 (45%), Positives = 86/140 (61%)
Frame = +3 / -3
Query: 579 LCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRLYISFF*N 758
LCTK+ TS+IQ+N ++PLRF H H CV CN CI+YQ + CSP + F H L IS *+
Sbjct: 758 LCTKKYTSEIQVNDIVPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKHTLNISLL*H 579
Query: 759 ISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSF 938
I S + T FNL ++FSL PGIV++NL +C + S+ N SR + N++W F
Sbjct: 578 IPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFANSSRSSSYNSHWGF 399
Query: 939 QLGSIFYNCLFNSGNMGLHT 998
L F +CLFN N+ L T
Sbjct: 398 NLFRSFGSCLFN*CNLSLDT 339
>gb|CX646399.1|CX646399 COLD1_9_D05.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_D05_A029 3', mRNA sequence
Length = 787
Score = 219 bits (472), Expect = 4e-056
Identities = 92/105 (87%), Positives = 99/105 (94%)
Frame = -3 / +1
Query: 518 VGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKK 339
VGLTGN+GQANYSAAKAGVIG TKTVAREYA+RNI NAIAPGFIASDMTA+LG+E+EKK
Sbjct: 1 VGLTGNIGQANYSAAKAGVIGLTKTVAREYATRNITANAIAPGFIASDMTAKLGDEIEKK 180
Query: 338 ILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
IL TIPLGRYGQPEEVAGLVEFLALNPAA+Y+TGQV IDGGMVM
Sbjct: 181 ILQTIPLGRYGQPEEVAGLVEFLALNPAANYITGQVFNIDGGMVM 315
Score = 134 bits (288), Expect = 1e-030
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1 / -3
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPSI+ T PVI*LAAGLRA+NST PATSSG PYLP GMV +IFF AV+S+
Sbjct: 317 YITIPPSILKTWPVI*LAAGLRAKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSE 138
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 137 AINPGAMALAVIFLVAYSLATVLV 66
>gb|DR386596.1|DR386596 RTHG1_16_F06.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_16_F06_A029 3', mRNA sequence
Length = 693
Score = 187 bits (402), Expect = 2e-046
Identities = 79/91 (86%), Positives = 85/91 (93%)
Frame = -3 / +2
Query: 476 AKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPE 297
AKAGVIG TKTVAREYA+RNI NAIAPGFIASDMTA+LG+E+EKKIL TIPLGRYGQPE
Sbjct: 2 AKAGVIGLTKTVAREYATRNITANAIAPGFIASDMTAKLGDEIEKKILQTIPLGRYGQPE 181
Query: 296 EVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
EVAGLVEFLALNPAA+Y+TGQV IDGGMVM
Sbjct: 182 EVAGLVEFLALNPAANYITGQVFNIDGGMVM 274
Score = 134 bits (288), Expect = 1e-030
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1 / -1
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPSI+ T PVI*LAAGLRA+NST PATSSG PYLP GMV +IFF AV+S+
Sbjct: 276 YITIPPSILKTWPVI*LAAGLRAKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSE 97
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 96 AINPGAMALAVIFLVAYSLATVLV 25
>gb|DR068649.1|DR068649 RTDK1_2_C05.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_2_C05_A029 3', mRNA sequence
Length = 658
Score = 127 bits (271), Expect(2) = 6e-040
Identities = 59/98 (60%), Positives = 67/98 (68%)
Frame = +1 / +1
Query: 742 SASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVT 921
SASF+ SPP +A PP ASI LETSSASF DRA*FTRTL PA P RA+ALPIPL+APVT
Sbjct: 130 SASFDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPALPSDRAMALPIPLEAPVT 309
Query: 922 TTTGASSLVASFTIACSTAATWVCTPENPRPDRSVGEK 1035
T TGAS+ + +ACS AT TP D + K
Sbjct: 310 TATGASTFLGVSAVACSIDAT*ALTPATWHSDLDLNRK 423
Score = 115 bits (246), Expect(2) = 1e-043
Identities = 51/87 (58%), Positives = 63/87 (72%)
Frame = -3 / -3
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 389 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 210
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEAD 741
AE+VS++IEA+GG AI +GGD+SKEAD
Sbjct: 209 AEDVSRQIEAAGGSAIVYGGDMSKEAD 129
Score = 82.2 bits (173), Expect(2) = 1e-043
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -3 / -1
Query: 737 ESMMKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVI 615
E M K +D WGT+D+LVNNAGIT+DTL+MRM KSQWQDVI
Sbjct: 124 EGMFKTVIDSWGTVDILVNNAGITKDTLMMRMTKSQWQDVI 2
Score = 69.3 bits (145), Expect(2) = 3e-021
Identities = 35/86 (40%), Positives = 49/86 (56%)
Frame = +3 / +3
Query: 741 ISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCN 920
IS *+I S + T FNL ++FSL PGIV++NL +C + S+ N SR +
Sbjct: 129 ISLL*HIPSINNG*ATSSFNLSRNIFSLLYRPGIVHKNLTACST**QSNGFANSSRSSSY 308
Query: 921 NNNWSFQLGSIFYNCLFNSGNMGLHT 998
N++W F L F +CLFN N+ L T
Sbjct: 309 NSHWGFNLFRSFSSCLFN*CNLSLDT 386
Score = 58.3 bits (121), Expect(2) = 6e-040
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3 / +2
Query: 615 NYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRL 737
N +LPLRF H H CV CN CI+YQ + CSP + F H L
Sbjct: 2 NDILPLRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKHTL 124
Score = 53.3 bits (110), Expect(2) = 3e-021
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = +1 / +3
Query: 616 ITSCH*DFFILINNVSRVIPALFTSTSIVPHLSRAAFIIDS 738
+TSCH*DF ILI +VS VIPALFT S VPH S I S
Sbjct: 3 MTSCH*DFVILIISVSFVIPALFTRMSTVPHESITVLNIPS 125
>gb|BG317846.1|BG317846 NXPV_006_D03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_006_D03 5' similar to Arabidopsis
thaliana sequence At1g24360 putative 3-oxoacyl
[acyl-carrier protein] reductase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 531
Score = 171 bits (369), Expect = 7e-042
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = -3 / +2
Query: 452 TKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEF 273
TKTVAREYA+RNI NAIAPGFIASDMTA+LG+E+EKKIL TIPLGRYGQPEEVAGLVEF
Sbjct: 5 TKTVAREYATRNITANAIAPGFIASDMTAKLGDEIEKKILQTIPLGRYGQPEEVAGLVEF 184
Query: 272 LALNPAASYMTGQVLTIDGGMVM 204
LALNPAA+Y+TGQV IDGGMVM
Sbjct: 185 LALNPAANYITGQVFNIDGGMVM 253
Score = 134 bits (288), Expect = 1e-030
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1 / -1
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPSI+ T PVI*LAAGLRA+NST PATSSG PYLP GMV +IFF AV+S+
Sbjct: 255 YITIPPSILKTWPVI*LAAGLRAKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSE 76
Query: 382 AMNPGAIAFTLIFLLAYSLATVFV 453
A+NPGA+A +IFL+AYSLATV V
Sbjct: 75 AINPGAMALAVIFLVAYSLATVLV 4
>gb|BQ696933.1|BQ696933 NXPV_047_A08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_047_A08 5' similar to Arabidopsis
thaliana sequence At1g24360 putative 3-oxoacyl
[acyl-carrier protein] reductase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 533
Score = 171 bits (369), Expect = 7e-042
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = -3 / +2
Query: 452 TKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEF 273
TKTVAREYA+RNI NAIAPGFIASDMTA+LG+E+EKKIL TIPLGRYGQPEEVAGLVEF
Sbjct: 5 TKTVAREYATRNITANAIAPGFIASDMTAKLGDEIEKKILQTIPLGRYGQPEEVAGLVEF 184
Query: 272 LALNPAASYMTGQVLTIDGGMVM 204
LALNPAA+Y+TGQV IDGGMVM
Sbjct: 185 LALNPAANYITGQVFNIDGGMVM 253
Score = 131 bits (281), Expect = 9e-030
Identities = 58/83 (69%), Positives = 67/83 (80%)
Frame = +1 / -3
Query: 205 ITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISDA 384
ITIPPSI+ T PVI*LAAGLRA+NST PATSSG PYLP GMV +IFF AV+S+A
Sbjct: 252 ITIPPSILKTWPVI*LAAGLRAKNSTKPATSSGCPYLPRGMVWRIFFSISSPSFAVMSEA 73
Query: 385 MNPGAIAFTLIFLLAYSLATVFV 453
+NPGA+A +IFL+AYSLATV V
Sbjct: 72 INPGAMALAVIFLVAYSLATVLV 4
>gb|DR694408.1|DR694408 EST1084500 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC12 3' end, mRNA sequence
Length = 581
Score = 95.5 bits (202), Expect(3) = 5e-034
Identities = 44/76 (57%), Positives = 51/76 (67%)
Frame = +1 / -1
Query: 808 ETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATW 987
+TSSASF DRA*FTRTL PA P RA+ALPIPL+APVTT TGAS+ + +ACS AT
Sbjct: 401 KTSSASFIDRA*FTRTLQPALPSDRAMALPIPLEAPVTTATGASTFLGVSAVACSIDAT* 222
Query: 988 VCTPENPRPDRSVGEK 1035
TP D + K
Sbjct: 221 ALTPATWHSDLDLNRK 174
Score = 75.3 bits (158), Expect(3) = 4e-036
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+GV+ VA++EQA + K+EAPV VVTGASR GCKVLVNYARS KE
Sbjct: 208 AGVKAQVASIEQATAETPKKVEAPVAVVTGASRGIGKAIALSLGRAGCKVLVNYARSIKE 387
Query: 821 AEEV 810
AE+V
Sbjct: 388 AEDV 399
Score = 66.1 bits (138), Expect(3) = 4e-036
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = -3 / +1
Query: 731 MMKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQ 630
M K +D WGT+D+LVNNAGIT+DTL+MRM KSQ
Sbjct: 478 MFKTVIDSWGTVDILVNNAGITKDTLMMRMTKSQ 579
Score = 49.2 bits (101), Expect(3) = 4e-036
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -3 / +2
Query: 809 SKEIEASGGEAITFGGDVSKEADVESMMK 723
S++IEA+GG AI +GGD+SKEADVE +K
Sbjct: 401 SRQIEAAGGSAIVYGGDMSKEADVEVCLK 487
Score = 49.2 bits (101), Expect(3) = 5e-034
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +3 / -3
Query: 630 LRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHH 731
LRF H H CV CN CI+YQ + CSP + F H
Sbjct: 579 LRFCHSHH*CVLCNTCIVYQDVNCSP*VNYRFKH 478
Score = 39.1 bits (79), Expect(3) = 5e-034
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 736 STSASFETSPPKVIASPPDASISLE 810
STSASF+ SPP +A PP ASI LE
Sbjct: 474 STSASFDISPP*TMAEPPAASICLE 400
>gb|BE123745.1|BE123745 NXNV_153_F02_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_153_F02 5' similar to Arabidopsis thaliana
sequence At1g24360 putative 3-oxoacyl [acyl-carrier
protein] reductase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 212
Score = 146 bits (313), Expect = 3e-034
Identities = 60/70 (85%), Positives = 65/70 (92%)
Frame = -3 / +1
Query: 686 VNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLT 507
VNNAGIT+DTL+MRM KSQWQDVIDLNLTGVFLCTQAA KVMMKK G++INIAS VGLT
Sbjct: 1 VNNAGITKDTLMMRMTKSQWQDVIDLNLTGVFLCTQAAAKVMMKKXXGRVINIASXVGLT 180
Query: 506 GNVGQANYSA 477
GN+GQANYSA
Sbjct: 181 GNIGQANYSA 210
Score = 104 bits (221), Expect = 2e-021
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +3 / -3
Query: 477 CAIISLANIASKTNYRCNVDNFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQ 656
C +ISL IAS+TN R +D+ S L HH F C LCTK+ TS+IQ+N +LPLRF H H
Sbjct: 210 CTVISLPYIASQTNXRSYIDDSSXXLLHHNFSCCLCTKKYTSEIQVNDILPLRFCHSHH* 31
Query: 657 CVSCNPCIIY 686
CV CN CI+Y
Sbjct: 30 CVLCNTCIVY 1
>gb|DR744138.1|DR744138 RTCU1_20_A08.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_20_A08_A029 5', mRNA sequence
Length = 771
Score = 104 bits (221), Expect(2) = 2e-026
Identities = 46/115 (40%), Positives = 69/115 (60%)
Frame = -3 / +2
Query: 704 GTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIA 525
G I +LVN AGI R + + + W DVID+NL V+L QAA + M+ R+GKI+N
Sbjct: 287 GRIHILVNCAGIQRRSPCVDFSEKDWDDVIDINLKSVWLLCQAAGRHMIPLREGKIVNFC 466
Query: 524 SVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAEL 360
S++ G + Y+AAK + TK+++ E++ N+ VN I PG+IA+ M L
Sbjct: 467 SLMSYQGGLTIPAYAAAKGALGQLTKSLSNEWSQHNVQVNGIVPGYIATAMNERL 631
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3 / +2
Query: 344 KKILSTIPLGRYGQPEEVAGLVEFLALN 261
++I IP GR+GQP++ AG + FLA N
Sbjct: 653 QQISERIPAGRWGQPKDFAGPIVFLASN 736
>gb|DR053427.1|DR053427 RTCA1_11_B12.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_11_B12_A029 3', mRNA sequence
Length = 786
Score = 103 bits (219), Expect(2) = 4e-026
Identities = 46/115 (40%), Positives = 69/115 (60%)
Frame = -3 / -2
Query: 704 GTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIA 525
G I +LVN AGI R + + + W DVID+NL V+L QAA + M+ R+GKI+N
Sbjct: 482 GRIHILVNCAGIQRRSPCVDFSEKDWDDVIDVNLKSVWLLCQAAGRHMIPLREGKIVNFC 303
Query: 524 SVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAEL 360
S++ G + Y+AAK + TK+++ E++ N+ VN I PG+IA+ M L
Sbjct: 302 SLMSYQGGLTIPAYAAAKGALGQLTKSLSNEWSQYNVQVNGIVPGYIATTMNERL 138
Score = 35.9 bits (72), Expect(2) = 4e-026
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3 / -2
Query: 344 KKILSTIPLGRYGQPEEVAGLVEFLALN 261
++I IP GR+GQP++ AG + FLA N
Sbjct: 116 QQISERIPAGRWGQPKDFAGPIVFLASN 33
>gb|BQ698789.1|BQ698789 NXNV_063_H02_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_063_H02 5' similar to Arabidopsis thaliana
sequence At1g24360 putative 3-oxoacyl [acyl-carrier
protein] reductase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 229
Score = 114 bits (243), Expect = 2e-024
Identities = 51/71 (71%), Positives = 57/71 (80%)
Frame = +1 / -1
Query: 736 STSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAP 915
STSA F+ SPP +A PP ASI LETSSASF DRA*FTRTL PA P RA+ALPIPL+AP
Sbjct: 220 STSAXFDISPP*TMAXPPAASICLETSSASFIDRA*FTRTLQPALPSDRAMALPIPLEAP 41
Query: 916 VTTTTGASSLV 948
VTT TGAS+ +
Sbjct: 40 VTTATGASTFL 8
>gb|DR744058.1|DR744058 RTCU1_20_A08.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_20_A08_A029 3', mRNA sequence
Length = 664
Score = 94.1 bits (199), Expect(2) = 2e-023
Identities = 41/106 (38%), Positives = 63/106 (59%)
Frame = -3 / +3
Query: 677 AGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNV 498
AGI R + + + W DVID+NL V+L QAA + M+ R+GKI+N S++ G +
Sbjct: 3 AGIQRRSPCVDFSEKDWDDVIDINLKSVWLLCQAAGRHMIPLREGKIVNFCSLMSYQGGL 182
Query: 497 GQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAEL 360
Y+AAK + TK+++ E++ N+ VN I PG+IA+ M L
Sbjct: 183 TIPAYAAAKGALGQLTKSLSNEWSQHNVQVNGIVPGYIATAMNERL 320
Score = 35.9 bits (72), Expect(2) = 2e-023
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3 / +3
Query: 344 KKILSTIPLGRYGQPEEVAGLVEFLALN 261
++I IP GR+GQP++ AG + FLA N
Sbjct: 342 QQISERIPAGRWGQPKDFAGPIVFLASN 425
>gb|CD025117.1|CD025117 NXSI_009_F04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_009_F04 5' similar to Arabidopsis thaliana
sequence At1g24360 putative 3-oxoacyl [acyl-carrier
protein] reductase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 171
Score = 110 bits (234), Expect = 3e-023
Identities = 46/56 (82%), Positives = 50/56 (89%)
Frame = -3 / +2
Query: 548 KGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIA 381
KG++INIASVVGLTGN+GQANYSAAKAGVIG TKTVAREYA+ NI NA APGF A
Sbjct: 2 KGRVINIASVVGLTGNIGQANYSAAKAGVIGLTKTVAREYATXNITANAXAPGFXA 169
>gb|BQ290504.1|BQ290504 NXRV045_B02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV045_B02 5' similar to Arabidopsis thaliana
sequence At1g24360 putative 3-oxoacyl [acyl-carrier
protein] reductase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 484
Score = 106 bits (227), Expect = 3e-022
Identities = 48/68 (70%), Positives = 53/68 (77%)
Frame = +1 / -1
Query: 739 TSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPV 918
TS + SPP +A PP ASI LETSSASF DRA*FTRTL PA P RA+ALPIPL+APV
Sbjct: 484 TSXXXDISPP*TMAEPPAASICLETSSASFIDRA*FTRTLQPALPSDRAMALPIPLEAPV 305
Query: 919 TTTTGASS 942
TT TGAS+
Sbjct: 304 TTATGAST 281
>gb|BQ699985.1|BQ699985 NXRV132_F03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV132_F03 5' similar to Arabidopsis thaliana
sequence At1g24360 putative 3-oxoacyl [acyl-carrier
protein] reductase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 215
Score = 106 bits (227), Expect = 3e-022
Identities = 46/69 (66%), Positives = 53/69 (76%)
Frame = -3 / +2
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 582
D+S + +K L T+D+LVNNAGIT+DTL+MRM KS WQDVIDLNLTGVFLCT
Sbjct: 8 DMSXXLMLRVCLKR*LTHGXTVDILVNNAGITKDTLMMRMTKSXWQDVIDLNLTGVFLCT 187
Query: 581 QAATKVMMK 555
QAA KVMMK
Sbjct: 188 QAAAKVMMK 214
>gb|DN448196.1|DN448196 EST943995 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC207 5' end, mRNA sequence
Length = 858
Score = 75.3 bits (158), Expect(3) = 6e-022
Identities = 34/94 (36%), Positives = 49/94 (52%)
Frame = -3 / +3
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W +N G FLC++ A K +++ G+IINI S V G YSA+
Sbjct: 375 LAQTSDEDWDRTFQVNCKGAFLCSREAAKRVVRGGGGRIINITSSVVAQARTGYGAYSAS 554
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E I N +APG +A+DM
Sbjct: 555 KASVEMMTRILAQELRGTQITANCVAPGPVATDM 656
Score = 37.7 bits (76), Expect(3) = 6e-022
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3 / +3
Query: 971 EQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEI 798
E+ ++ LE V +VTGASR G KV+V+Y+ + AEEV+ I
Sbjct: 30 EEKSIRTPLPLEGRVAIVTGASRGIGREIALNLAEKGAKVVVHYSSNQAAAEEVASLI 203
Score = 29.5 bits (58), Expect(3) = 6e-022
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3 / +3
Query: 791 SGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
+G AI DV++ + V + +G + ++VNNAG+
Sbjct: 231 NGVRAIVCKADVAEPSQVAQLFDMGEHTFGPLHIVVNNAGV 353
>gb|DN448318.1|DN448318 EST944117 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC349 5' end, mRNA sequence
Length = 856
Score = 75.3 bits (158), Expect(3) = 6e-022
Identities = 34/94 (36%), Positives = 49/94 (52%)
Frame = -3 / +3
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W +N G FLC++ A K +++ G+IINI S V G YSA+
Sbjct: 375 LAQTSDEDWDRTFQVNCKGAFLCSREAAKRVVRGGGGRIINITSSVVAQARTGYGAYSAS 554
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E I N +APG +A+DM
Sbjct: 555 KASVEMMTRILAQELRGTQITANCVAPGPVATDM 656
Score = 37.7 bits (76), Expect(3) = 6e-022
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3 / +3
Query: 971 EQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEI 798
E+ ++ LE V +VTGASR G KV+V+Y+ + AEEV+ I
Sbjct: 30 EEKSIRTPLPLEGRVAIVTGASRGIGREIALNLAEKGAKVVVHYSSNQAAAEEVASLI 203
Score = 29.5 bits (58), Expect(3) = 6e-022
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3 / +3
Query: 791 SGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
+G AI DV++ + V + +G + ++VNNAG+
Sbjct: 231 NGVRAIVCKADVAEPSQVAQLFDMGEHTFGPLHIVVNNAGV 353
>gb|DT624306.1|DT624306 EST1158581 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD22 5' end, mRNA sequence
Length = 855
Score = 75.3 bits (158), Expect(3) = 6e-022
Identities = 34/94 (36%), Positives = 49/94 (52%)
Frame = -3 / +3
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W +N G FLC++ A K +++ G+IINI S V G YSA+
Sbjct: 375 LAQTSDEDWDRTFQVNCKGAFLCSREAAKRVVRGGGGRIINITSSVVAQARTGYGAYSAS 554
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E I N +APG +A+DM
Sbjct: 555 KASVEMMTRILAQELRGTQITANCVAPGPVATDM 656
Score = 37.7 bits (76), Expect(3) = 6e-022
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3 / +3
Query: 971 EQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEI 798
E+ ++ LE V +VTGASR G KV+V+Y+ + AEEV+ I
Sbjct: 30 EEKSIRTPLPLEGRVAIVTGASRGIGREIALNLAEKGAKVVVHYSSNQAAAEEVASLI 203
Score = 29.5 bits (58), Expect(3) = 6e-022
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3 / +3
Query: 791 SGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
+G AI DV++ + V + +G + ++VNNAG+
Sbjct: 231 NGVRAIVCKADVAEPSQVAQLFDMGEHTFGPLHIVVNNAGV 353
>gb|DT626557.1|DT626557 EST1158481 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAC11 5' end, mRNA sequence
Length = 825
Score = 75.3 bits (158), Expect(3) = 6e-022
Identities = 34/94 (36%), Positives = 49/94 (52%)
Frame = -3 / +3
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W +N G FLC++ A K +++ G+IINI S V G YSA+
Sbjct: 375 LAQTSDEDWDRTFQVNCKGAFLCSREAAKRVVRGGGGRIINITSSVVAQARTGYGAYSAS 554
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E I N +APG +A+DM
Sbjct: 555 KASVEMMTRILAQELRGTQITANCVAPGPVATDM 656
Score = 37.7 bits (76), Expect(3) = 6e-022
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3 / +3
Query: 971 EQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEI 798
E+ ++ LE V +VTGASR G KV+V+Y+ + AEEV+ I
Sbjct: 30 EEKSIRTPLPLEGRVAIVTGASRGIGREIALNLAEKGAKVVVHYSSNQAAAEEVASLI 203
Score = 29.5 bits (58), Expect(3) = 6e-022
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3 / +3
Query: 791 SGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
+G AI DV++ + V + +G + ++VNNAG+
Sbjct: 231 NGVRAIVCKADVAEPSQVAQLFDMGEHTFGPLHIVVNNAGV 353
>gb|CV138710.1|CV138710 EST849919 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB637 5' end, mRNA sequence
Length = 866
Score = 68.4 bits (143), Expect(3) = 2e-021
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / +3
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 315 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPKPGFGPYTAS 494
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 495 KAAVEMMTRILAQELRGTHITANCVAPGAVATDM 596
Score = 38.6 bits (78), Expect(3) = 2e-021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / +3
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 6 LEGRVAIVTGASRGIGREIALHLAEKGAKVVVHYSSNQAAAEEVASKINKS 158
Score = 33.6 bits (67), Expect(3) = 2e-021
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3 / +3
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI DV++ + V + A +GT+ ++VNNAG+
Sbjct: 174 GVRAIVCKADVAEPSQVAHLFDMAEQTFGTLHIVVNNAGV 293
>gb|DN447649.1|DN447649 EST943448 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBV40 5' end, mRNA sequence
Length = 836
Score = 68.4 bits (143), Expect(3) = 2e-021
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / +2
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 419 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPKPGFGPYTAS 598
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 599 KAAVEMMTRILAQELRGTHITANCVAPGAVATDM 700
Score = 38.6 bits (78), Expect(3) = 2e-021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / +2
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 110 LEGRVAIVTGASRGIGREIALHLAEKGAKVVVHYSSNQAAAEEVASKINKS 262
Score = 33.6 bits (67), Expect(3) = 2e-021
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3 / +2
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI DV++ + V + A +GT+ ++VNNAG+
Sbjct: 278 GVRAIVCKADVAEPSQVAHLFDMAEQTFGTLHIVVNNAGV 397
>gb|CO413464.1|CO413464 EST843849 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMB28 5' end, mRNA sequence
Length = 825
Score = 68.4 bits (143), Expect(3) = 2e-021
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / +2
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 419 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPKPGFGPYTAS 598
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 599 KAAVEMMTRILAQELRGTHITANCVAPGAVATDM 700
Score = 38.6 bits (78), Expect(3) = 2e-021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / +2
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 110 LEGRVAIVTGASRGIGREIALHLAEKGAKVVVHYSSNQAAAEEVASKINKS 262
Score = 33.6 bits (67), Expect(3) = 2e-021
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3 / +2
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI DV++ + V + A +GT+ ++VNNAG+
Sbjct: 278 GVRAIVCKADVAEPSQVAHLFDMAEQTFGTLHIVVNNAGV 397
>gb|CO411223.1|CO411223 EST841608 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALH41 5' end, mRNA sequence
Length = 811
Score = 68.4 bits (143), Expect(3) = 2e-021
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / +2
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 419 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPKPGFGPYTAS 598
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 599 KAAVEMMTRILAQELRGTHITANCVAPGAVATDM 700
Score = 38.6 bits (78), Expect(3) = 2e-021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / +2
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 110 LEGRVAIVTGASRGIGREIALHLAEKGAKVVVHYSSNQAAAEEVASKINKS 262
Score = 33.6 bits (67), Expect(3) = 2e-021
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3 / +2
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI DV++ + V + A +GT+ ++VNNAG+
Sbjct: 278 GVRAIVCKADVAEPSQVAHLFDMAEQTFGTLHIVVNNAGV 397
>gb|DR090135.1|DR090135 RTAL1_12_H09.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_12_H09_A029 5', mRNA sequence
Length = 623
Score = 103 bits (220), Expect = 2e-021
Identities = 45/115 (39%), Positives = 69/115 (60%)
Frame = -3 / +2
Query: 704 GTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIA 525
G I +LVN AG+ R + + + W DVID+NL V+L QAA + M+ R+GKI+N
Sbjct: 266 GRIHILVNCAGVQRRSPCVDFSEKDWDDVIDVNLKSVWLLCQAAGRHMIPLREGKIVNFC 445
Query: 524 SVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAEL 360
S++ G + Y+AAK + TK+++ E++ N+ VN I PG+IA+ M L
Sbjct: 446 SLMSYQGGLTIPAYAAAKGALGQLTKSLSNEWSQHNVQVNGIVPGYIATTMNERL 610
>gb|CX646377.1|CX646377 COLD1_9_A11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_A11_A029 3', mRNA sequence
Length = 874
Score = 67.5 bits (141), Expect(3) = 3e-021
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / +1
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 310 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPTPGFGAYTAS 489
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 490 KAAVEMMTRILAQELRGTHITANCVAPGPVATDM 591
Score = 38.2 bits (77), Expect(3) = 3e-021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / +1
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 1 LEGRVAIVTGASRGIGREIAFHLAEKGAKVVVHYSSNQAAAEEVASKINNS 153
Score = 34.5 bits (69), Expect(3) = 3e-021
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3 / +1
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI DV++ + V + A +GT+ ++VNNAG+
Sbjct: 169 GVRAIVCKADVAEPSQVAHLFDTAEQSFGTLHIVVNNAGV 288
>gb|DR069225.1|DR069225 RTDK1_5_E12.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_5_E12_A029 5', mRNA sequence
Length = 760
Score = 67.5 bits (141), Expect(3) = 3e-021
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / +3
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 324 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPTPGFGAYTAS 503
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 504 KAAVEMMTRILAQELRGTHITANCVAPGPVATDM 605
Score = 38.2 bits (77), Expect(3) = 3e-021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / +3
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 15 LEGRVAIVTGASRGIGREIAFHLAEKGAKVVVHYSSNQAAAEEVASKINNS 167
Score = 34.5 bits (69), Expect(3) = 3e-021
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3 / +3
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI DV++ + V + A +GT+ ++VNNAG+
Sbjct: 183 GVRAIVCKADVAEPSQVAHLFDTAEQSFGTLHIVVNNAGV 302
>gb|DR069972.1|DR069972 RTDK1_10_B06.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_10_B06_A029 5', mRNA sequence
Length = 678
Score = 67.5 bits (141), Expect(3) = 3e-021
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / +1
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 325 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPTPGFGAYTAS 504
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 505 KAAVEMMTRILAQELRGTHITANCVAPGPVATDM 606
Score = 38.2 bits (77), Expect(3) = 3e-021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / +1
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 16 LEGRVAIVTGASRGIGREIAFHLAEKGAKVVVHYSSNQAAAEEVASKINNS 168
Score = 34.5 bits (69), Expect(3) = 3e-021
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3 / +1
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI DV++ + V + A +GT+ ++VNNAG+
Sbjct: 184 GVRAIVCKADVAEPSQVAHLFDTAEQSFGTLHIVVNNAGV 303
>gb|DN465657.1|DN465657 EST961456 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJT03 5' end, mRNA sequence
Length = 926
Score = 67.5 bits (141), Expect(3) = 4e-021
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / +3
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 315 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPTPGFGAYTAS 494
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 495 KAAVEMMTRILAQELRGTHITANCVAPGPVATDM 596
Score = 38.2 bits (77), Expect(3) = 4e-021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / +3
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 6 LEGRVAIVTGASRGIGREIAFHLAEKGAKVVVHYSSNQAAAEEVASKINNS 158
Score = 34.1 bits (68), Expect(3) = 4e-021
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3 / +3
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI DV++ + V + A +GT+ ++VNNAG+
Sbjct: 174 GVRAIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGV 293
>gb|CX715189.1|CX715189 RTPQ1_32_F12.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_32_F12_A032 3', mRNA sequence
Length = 773
Score = 67.5 bits (141), Expect(3) = 4e-021
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / -2
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 448 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPTPGFGAYTAS 269
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 268 KAAVEMMTRILAQELRGTHITANCVAPGPVATDM 167
Score = 38.2 bits (77), Expect(3) = 4e-021
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / -2
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 757 LEGRVAIVTGASRGIGREIAFHLAEKGAKVVVHYSSNQAAAEEVASKINNS 605
Score = 34.1 bits (68), Expect(3) = 4e-021
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3 / -2
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI DV++ + V + A +GT+ ++VNNAG+
Sbjct: 589 GVRAIVCKADVAEPSQVAHLFDTAEQTFGTLHIVVNNAGV 470
>gb|CF402020.1|CF402020 RTWW1_16_E06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_E06_A015 5', mRNA sequence
Length = 750
Score = 68.4 bits (143), Expect(3) = 1e-020
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -3 / +3
Query: 653 LMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAA 474
L + W + +N G FLC++ A +++ G+IIN++S + G Y+A+
Sbjct: 315 LAQTSDEDWDRIFQVNCKGAFLCSREAANRVVRGGGGRIINLSSSLVGLPKPGFGPYTAS 494
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
KA V T+ +A+E +I N +APG +A+DM
Sbjct: 495 KAAVEMMTRILAQELRGTHITANCVAPGAVATDM 596
Score = 38.2 bits (77), Expect(3) = 1e-020
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -3 / +3
Query: 941 LEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKEAEEVSKEIEAS 789
LE V +VTGASR G KV+V+Y+ + AEEV+ +I S
Sbjct: 6 LEVRVAIVTGASRGIGREIALHLAEKGAKVVVHYSSNQAAAEEVASKINNS 158
Score = 31.8 bits (63), Expect(3) = 1e-020
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3 / +3
Query: 788 GGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGI 669
G AI +V++ + V + A +GT+ ++VNNAG+
Sbjct: 174 GVRAIVCKANVAEPSQVAHLFDTAEQTFGTLHIVVNNAGV 293
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 628,707,088
Number of Sequences: 355925
Number of extensions: 9866596
Number of successful extensions: 62457
Number of sequences better than 1.0e-020: 55
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 19260497790
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)