TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748501.2.2
(993 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR116719.1|DR116719 RTMG1_2_H06.b1_A029 Roots minus magn... 166 2e-078
gb|DR081137.1|DR081137 RTFEPL1_27_E02.g1_A029 Roots plus ad... 166 2e-078
gb|DR695125.1|DR695125 EST1085218 Normalized pine embryo li... 166 2e-078
gb|DR078300.1|DR078300 RTFEPL1_3_E07.b1_A029 Roots plus add... 166 2e-078
gb|DR012004.1|DR012004 HEAT1_9_A04.g1_A029 Root at 37 C for... 163 1e-077
gb|DR015949.1|DR015949 STRS1_6_E08.g1_A034 Shoot tip pitch ... 166 1e-076
gb|CX652552.1|CX652552 COLD1_59_G09.g1_A029 Root cold Pinus... 153 1e-074
gb|DT631539.1|DT631539 EST1146470 Normalized pine embryo li... 147 3e-071
gb|DR116804.1|DR116804 RTMG1_2_H06.g1_A029 Roots minus magn... 147 2e-069
gb|DR683816.1|DR683816 EST1073892 Normalized pine embryo li... 147 7e-068
gb|DR023499.1|DR023499 STRS1_58_C09.b1_A034 Shoot tip pitch... 146 2e-065
gb|CO199718.1|CO199718 GEO2_3_C05.b1_A032 Root gravitropism... 156 3e-065
gb|CO163161.1|CO163161 FLD1_39_G12.g1_A029 Root flooded Pin... 141 3e-065
gb|CV035130.1|CV035130 RTNACL1_13_F12.g1_A029 Roots plus ad... 141 3e-065
gb|DR011028.1|DR011028 HEAT1_2_H06.g1_A029 Root at 37 C for... 141 3e-065
gb|CF477204.1|CF477204 RTWW3_6_C08.g1_A022 Well-watered lob... 141 3e-065
gb|CO368907.1|CO368907 RTK1_43_D10.g1_A029 Roots minus pota... 141 3e-065
gb|DR743246.1|DR743246 RTCU1_14_C05.g1_A029 Roots plus adde... 141 3e-065
gb|CO368683.1|CO368683 RTK1_42_D09.b1_A029 Roots minus pota... 137 5e-064
gb|DT638133.1|DT638133 EST1153064 Normalized pine embryo li... 140 4e-063
gb|DR693161.1|DR693161 EST1083249 Normalized pine embryo li... 140 4e-063
gb|DT638590.1|DT638590 EST1153521 Normalized pine embryo li... 147 2e-062
gb|CF672139.1|CF672139 RTCNT1_61_D05.g1_A029 Root control P... 141 2e-061
gb|BF518065.1|BF518065 NXSI_030_E12_F NXSI (Nsf Xylem Side ... 135 2e-060
gb|DR118198.1|DR118198 RTMG1_11_F01.g1_A029 Roots minus mag... 128 4e-060
gb|DR078368.1|DR078368 RTFEPL1_3_E07.g1_A029 Roots plus add... 166 2e-059
gb|DR744517.1|DR744517 RTCU1_23_B05.b1_A029 Roots plus adde... 166 2e-058
gb|BF518064.1|BF518064 NXSI_030_E11_F NXSI (Nsf Xylem Side ... 127 6e-058
gb|AW869996.1|AW869996 NXNV_120_G12_F Nsf Xylem Normal wood... 122 2e-056
gb|AA556813.1|AA556813 655 Loblolly pine C Pinus taeda cDNA... 137 4e-056
gb|DR015870.1|DR015870 STRS1_6_E08.b1_A034 Shoot tip pitch ... 147 8e-055
gb|DR047460.1|DR047460 RTBOR1_1_E07.b1_A029 Roots plus adde... 147 8e-055
gb|DR694258.1|DR694258 EST1084349 Normalized pine embryo li... 147 5e-054
gb|CF390163.1|CF390163 RTDR2_12_E06.g1_A021 Loblolly pine r... 147 5e-054
gb|BE520108.1|BE520108 NXCI_016_H09_F NXCI (Nsf Xylem Compr... 128 7e-054
gb|CX653219.1|CX653219 COLD1_64_D11.b1_A029 Root cold Pinus... 166 6e-053
gb|BF220863.1|BF220863 NXCI_155_A01_F NXCI (Nsf Xylem Compr... 128 4e-051
gb|DR058934.1|DR058934 RTNIT1_14_F04.g1_A029 Roots minus ni... 141 1e-050
gb|DR059266.1|DR059266 RTNIT1_16_E05.g1_A029 Roots minus ni... 141 1e-050
gb|DR109623.1|DR109623 RTS1_3_C05.g1_A029 Roots minus sulfu... 147 2e-050
gb|BX678795.1|BX678795 BX678795 RS Pinus pinaster cDNA clon... 120 2e-050
gb|DR168155.1|DR168155 RTPHOS1_23_C06.g1_A029 Roots minus p... 147 2e-049
gb|CX653292.1|CX653292 COLD1_64_D11.g1_A029 Root cold Pinus... 147 3e-046
gb|BE644138.1|BE644138 NXCI_054_H09_F NXCI (Nsf Xylem Compr... 147 4e-044
gb|CO364769.1|CO364769 RTK1_21_E05.g1_A029 Roots minus pota... 146 7e-044
gb|BE496519.1|BE496519 NXCI_020_A11_F NXCI (Nsf Xylem Compr... 108 1e-043
gb|BM903420.1|BM903420 NXRV_041_C08_F NXRV (Nsf Xylem Root ... 104 2e-042
gb|CO368835.1|CO368835 RTK1_43_D10.b1_A029 Roots minus pota... 141 3e-041
gb|AW064614.1|AW064614 ST33F07 Pine TriplEx shoot tip libra... 167 9e-041
gb|CX651270.1|CX651270 COLD1_51_F10.b1_A029 Root cold Pinus... 114 3e-039
gb|CF389446.1|CF389446 RTDR2_7_D03.g1_A021 Loblolly pine ro... 147 1e-037
gb|BE496259.1|BE496259 NXCI_012_H07_F NXCI (Nsf Xylem Compr... 150 2e-035
gb|BX250799.1|BX250799 BX250799 Pinus pinaster differenciat... 147 1e-034
gb|CO159320.1|CO159320 FLD1_12_H01.g1_A029 Root flooded Pin... 147 1e-034
gb|BX678836.1|BX678836 BX678836 RS Pinus pinaster cDNA clon... 105 3e-034
gb|CF399609.1|CF399609 RTDS3_26_E02.g1_A022 Drought-stresse... 102 1e-033
gb|CF478208.1|CF478208 RTWW3_19_E07.g1_A022 Well-watered lo... 143 2e-033
gb|CF664799.1|CF664799 RTCNT1_12_B07.b1_A029 Root control P... 143 2e-033
gb|CF664880.1|CF664880 RTCNT1_12_B07.g1_A029 Root control P... 143 2e-033
gb|CF669591.1|CF669591 RTCNT1_44_H07.g1_A029 Root control P... 143 2e-033
gb|CF671501.1|CF671501 RTCNT1_57_B07.g1_A029 Root control P... 143 2e-033
gb|CF672019.1|CF672019 RTCNT1_60_F11.g1_A029 Root control P... 143 2e-033
gb|BX678800.1|BX678800 BX678800 RS Pinus pinaster cDNA clon... 143 2e-033
gb|BX679950.1|BX679950 BX679950 RS Pinus pinaster cDNA clon... 143 2e-033
gb|CO163300.1|CO163300 FLD1_40_E10.g1_A029 Root flooded Pin... 143 2e-033
gb|CO362139.1|CO362139 RTK1_1_B11.g1_A029 Roots minus potas... 143 2e-033
gb|CO367543.1|CO367543 RTK1_35_A06.b1_A029 Roots minus pota... 143 2e-033
gb|CO367617.1|CO367617 RTK1_35_A06.g1_A029 Roots minus pota... 143 2e-033
gb|CV034443.1|CV034443 RTNACL1_9_A04.b1_A029 Roots plus add... 143 2e-033
gb|CV034499.1|CV034499 RTNACL1_9_A04.g1_A029 Roots plus add... 143 2e-033
gb|CX647213.1|CX647213 COLD1_14_H08.b1_A029 Root cold Pinus... 143 2e-033
gb|CX648436.1|CX648436 COLD1_28_D09.g1_A029 Root cold Pinus... 143 2e-033
gb|CX649863.1|CX649863 COLD1_42_A05.b1_A029 Root cold Pinus... 143 2e-033
gb|CX649932.1|CX649932 COLD1_42_A05.g1_A029 Root cold Pinus... 143 2e-033
gb|DR019318.1|DR019318 STRS1_29_E03.b1_A034 Shoot tip pitch... 143 2e-033
gb|DR019386.1|DR019386 STRS1_29_E03.g1_A034 Shoot tip pitch... 143 2e-033
gb|DR020495.1|DR020495 STRS1_37_H07.b1_A034 Shoot tip pitch... 143 2e-033
gb|DR060364.1|DR060364 RTNIT1_27_H05.b1_A029 Roots minus ni... 143 2e-033
gb|DR069276.1|DR069276 RTDK1_6_D02.b1_A029 Roots, dark Pinu... 143 2e-033
gb|DR069340.1|DR069340 RTDK1_6_D02.g1_A029 Roots, dark Pinu... 143 2e-033
gb|DR072291.1|DR072291 RTDK1_25_G03.b1_A029 Roots, dark Pin... 143 2e-033
gb|DR109640.1|DR109640 RTS1_3_E07.g1_A029 Roots minus sulfu... 143 2e-033
gb|DR116628.1|DR116628 RTMG1_1_F07.g1_A029 Roots minus magn... 143 2e-033
gb|DR119006.1|DR119006 RTMG1_20_C03.g1_A029 Roots minus mag... 143 2e-033
gb|DR167536.1|DR167536 RTPHOS1_19_A09.g1_A029 Roots minus p... 143 2e-033
gb|DR385412.1|DR385412 RTHG1_8_B08.g1_A029 Roots plus added... 143 2e-033
gb|CF391557.1|CF391557 RTDR3_9_D03.g1_A022 Loblolly pine ro... 142 3e-033
gb|BQ701711.1|BQ701711 NXSI_118_G02_F NXSI (Nsf Xylem Side ... 141 6e-033
gb|AW869915.1|AW869915 NXNV_123_A05_F Nsf Xylem Normal wood... 141 9e-033
gb|BM133515.1|BM133515 NXLV_008_B01_F NXLV (Nsf Xylem Late ... 141 9e-033
gb|CO163082.1|CO163082 FLD1_39_G12.b1_A029 Root flooded Pin... 141 9e-033
gb|DR169195.1|DR169195 RTPHOS1_30_E08.g1_A029 Roots minus p... 141 9e-033
gb|DR694175.1|DR694175 EST1084265 Normalized pine embryo li... 141 9e-033
gb|DT638620.1|DT638620 EST1153551 Normalized pine embryo li... 141 9e-033
gb|DR078441.1|DR078441 RTFEPL1_4_E07.b1_A029 Roots plus add... 139 3e-032
gb|BX254534.1|BX254534 BX254534 Pinus pinaster differenciat... 138 4e-032
gb|CF395152.1|CF395152 RTDS2_10_E11.b1_A021 Drought-stresse... 137 2e-031
gb|CF475902.1|CF475902 RTWW2_15_G09.g1_A021 Well-watered lo... 137 2e-031
gb|BX681492.1|BX681492 BX681492 RS Pinus pinaster cDNA clon... 134 1e-030
gb|DR020571.1|DR020571 STRS1_37_H07.g1_A034 Shoot tip pitch... 132 4e-030
gb|DR116561.1|DR116561 RTMG1_1_F07.b1_A029 Roots minus magn... 132 4e-030
gb|BX255332.1|BX255332 BX255332 Pinus pinaster differenciat... 126 5e-030
gb|CO160922.1|CO160922 FLD1_25_B04.g1_A029 Root flooded Pin... 124 9e-030
gb|BX250310.1|BX250310 BX250310 Pinus pinaster differenciat... 124 1e-029
gb|CO199798.1|CO199798 GEO2_3_C05.g1_A032 Root gravitropism... 128 5e-029
gb|DR743172.1|DR743172 RTCU1_14_C05.b1_A029 Roots plus adde... 128 5e-029
gb|DR167466.1|DR167466 RTPHOS1_19_A09.b1_A029 Roots minus p... 127 9e-029
gb|DR019495.1|DR019495 STRS1_30_A05.g1_A034 Shoot tip pitch... 106 1e-028
gb|CO362645.1|CO362645 RTK1_5_A11.b1_A029 Roots minus potas... 125 6e-028
gb|BQ698981.1|BQ698981 NXRV117_H02_F NXRV (Nsf Xylem Root w... 124 1e-027
gb|BQ700392.1|BQ700392 NXRV105_A11_F NXRV (Nsf Xylem Root w... 124 1e-027
gb|DR072364.1|DR072364 RTDK1_25_G03.g1_A029 Roots, dark Pin... 124 1e-027
gb|DR745694.1|DR745694 RTCU1_31_E05.g1_A029 Roots plus adde... 124 1e-027
gb|AW869924.1|AW869924 NXNV_120_A02_F Nsf Xylem Normal wood... 122 5e-027
gb|AW226006.1|AW226006 ST76C03 Pine TriplEx shoot tip libra... 121 1e-026
gb|DR385332.1|DR385332 RTHG1_8_B08.b1_A029 Roots plus added... 120 1e-026
gb|BG319123.1|BG319123 NXPV_024_A02_F NXPV (Nsf Xylem Plani... 117 1e-025
gb|AW755021.1|AW755021 PC09F11 Pine TriplEx pollen cone lib... 116 2e-025
gb|DR159917.1|DR159917 RTFE1_2_B04.g1_A029 Roots minus iron... 115 5e-025
gb|BG039331.1|BG039331 NXSI_097_H04_F NXSI (Nsf Xylem Side ... 114 9e-025
gb|BQ701234.1|BQ701234 NXSI_061_B02_F NXSI (Nsf Xylem Side ... 114 9e-025
gb|BE209164.1|BE209164 NXNV_164_G03_F Nsf Xylem Normal wood... 111 8e-024
gb|DR068539.1|DR068539 RTDK1_1_A03.g1_A029 Roots, dark Pinu... 111 8e-024
gb|BF778279.1|BF778279 NXSI_082_E08_F NXSI (Nsf Xylem Side ... 109 3e-023
gb|DR010954.1|DR010954 HEAT1_2_H06.b1_A029 Root at 37 C for... 109 3e-023
gb|CX651352.1|CX651352 COLD1_51_F10.g1_A029 Root cold Pinus... 106 3e-022
gb|BQ700475.1|BQ700475 NXRV107_B08_F NXRV (Nsf Xylem Root w... 88 4e-022
gb|AW461189.1|AW461189 NXNV028E07F Nsf Xylem Normal wood Ve... 84 1e-021
gb|CD027619.1|CD027619 NXNV028E07 Nsf Xylem Normal wood Ver... 84 1e-021
>gb|DR116719.1|DR116719 RTMG1_2_H06.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_2_H06_A029 3', mRNA sequence
Length = 846
Score = 166 bits (356), Expect(2) = 2e-078
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 355 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 534
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 535 ALEGILYCKHHFSQLFKEKGSYNHLIK 615
Score = 147 bits (316), Expect(2) = 2e-078
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 88 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 267
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 268 FDQLFRESGNFNKNF 312
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +1
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 79 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 258
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 259 KPHFDQLFRESGNFN 303
Score = 105 bits (224), Expect = 5e-022
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +2 / +1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 391 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 570
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 571 SQLFKEKGSYN 603
Score = 103 bits (220), Expect(2) = 3e-046
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 311 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 132
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 131 VLSQALHFCCVPVK 90
Score = 102 bits (217), Expect(2) = 3e-046
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -1 / -2
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 602 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 423
Query: 393 QAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q AHLS*VPEN D+LLG LV S +P
Sbjct: 422 QVAHLS*VPENIIDTLLGDLVISGERPSIP 333
>gb|DR081137.1|DR081137 RTFEPL1_27_E02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_27_E02_A029 5', mRNA sequence
Length = 821
Score = 166 bits (356), Expect(2) = 2e-078
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2 / -3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 552 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 373
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 372 ALEGILYCKHHFSQLFKEKGSYNHLIK 292
Score = 147 bits (316), Expect(2) = 2e-078
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / -3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 819 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 640
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 639 FDQLFRESGNFNKNF 595
Score = 106 bits (227), Expect = 2e-022
Identities = 39/72 (54%), Positives = 55/72 (76%)
Frame = +2 / -3
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYCK H
Sbjct: 819 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 640
Query: 539 FAQLFMEKGSYS 574
F QLF E G+++
Sbjct: 639 FDQLFRESGNFN 604
Score = 105 bits (224), Expect = 5e-022
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +2 / -3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 516 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 337
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 336 SQLFKEKGSYN 304
Score = 103 bits (220), Expect(2) = 3e-046
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / +2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 596 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 775
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 776 VLSQALHFCCVPVK 817
Score = 102 bits (217), Expect(2) = 3e-046
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -1 / +2
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 305 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 484
Query: 393 QAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q AHLS*VPEN D+LLG LV S +P
Sbjct: 485 QVAHLS*VPENIIDTLLGDLVISGERPSIP 574
>gb|DR695125.1|DR695125 EST1085218 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEK79 3' end, mRNA sequence
Length = 820
Score = 166 bits (356), Expect(2) = 2e-078
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 453 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 632
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 633 ALEGILYCKHHFSQLFKEKGSYNHLIK 713
Score = 147 bits (316), Expect(2) = 2e-078
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 186 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 365
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 366 FDQLFRESGNFNKNF 410
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +3
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 177 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 356
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 357 KPHFDQLFRESGNFN 401
Score = 105 bits (224), Expect = 5e-022
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 489 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 668
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 669 SQLFKEKGSYN 701
Score = 103 bits (220), Expect(2) = 3e-046
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 409 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 230
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 229 VLSQALHFCCVPVK 188
Score = 102 bits (217), Expect(2) = 3e-046
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -1 / -1
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 700 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 521
Query: 393 QAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q AHLS*VPEN D+LLG LV S +P
Sbjct: 520 QVAHLS*VPENIIDTLLGDLVISGERPSIP 431
>gb|DR078300.1|DR078300 RTFEPL1_3_E07.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_3_E07_A029 3', mRNA sequence
Length = 783
Score = 166 bits (356), Expect(2) = 2e-078
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2 / -2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 311 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 132
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 131 ALEGILYCKHHFSQLFKEKGSYNHLIK 51
Score = 147 bits (316), Expect(2) = 2e-078
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / -2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 578 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 399
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 398 FDQLFRESGNFNKNF 354
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / -2
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 587 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 408
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 407 KPHFDQLFRESGNFN 363
Score = 105 bits (224), Expect = 5e-022
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +2 / -2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 275 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 96
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 95 SQLFKEKGSYN 63
Score = 103 bits (220), Expect(2) = 3e-046
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / +1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 355 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 534
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 535 VLSQALHFCCVPVK 576
Score = 102 bits (217), Expect(2) = 3e-046
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -1 / +1
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 64 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 243
Query: 393 QAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q AHLS*VPEN D+LLG LV S +P
Sbjct: 244 QVAHLS*VPENIIDTLLGDLVISGERPSIP 333
>gb|DR012004.1|DR012004 HEAT1_9_A04.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_9_A04_A029 5', mRNA sequence
Length = 663
Score = 163 bits (351), Expect(2) = 1e-077
Identities = 60/86 (69%), Positives = 74/86 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 405 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 584
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMM 583
AL G+LYCK HF+QLF EKGSY+H++
Sbjct: 585 ALEGILYCKHHFSQLFKEKGSYNHLI 662
Score = 147 bits (316), Expect(2) = 1e-077
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 138 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 317
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 318 FDQLFRESGNFNKNF 362
Score = 107 bits (229), Expect = 1e-022
Identities = 40/87 (45%), Positives = 60/87 (68%)
Frame = +2 / +3
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 129 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 308
Query: 530 KIHFAQLFMEKGSYSHMMKKSPSQDTL 610
K HF QLF E G+++ + S +
Sbjct: 309 KPHFDQLFRESGNFNKNFQSQRSSKAI 389
Score = 105 bits (224), Expect = 5e-022
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 441 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 620
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 621 SQLFKEKGSYN 653
Score = 103 bits (220), Expect(2) = 7e-046
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 361 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 182
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 181 VLSQALHFCCVPVK 140
Score = 101 bits (215), Expect(2) = 7e-046
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = -1 / -3
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 652 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 473
Query: 393 QAAHLS*VPENADDSLLGALVSS 325
Q AHLS*VPEN D+LLG LV S
Sbjct: 472 QVAHLS*VPENIMDTLLGDLVIS 404
>gb|DR015949.1|DR015949 STRS1_6_E08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_E08_A034 5', mRNA sequence
Length = 826
Score = 166 bits (356), Expect(2) = 1e-076
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2 / -3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 569 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 390
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 389 ALEGILYCKHHFSQLFKEKGSYNHLIK 309
Score = 141 bits (303), Expect(2) = 1e-076
Identities = 49/71 (69%), Positives = 63/71 (88%)
Frame = +2 / -3
Query: 83 TQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQL 262
TQ KC CDKTV+F+D L+ADGV+YHKTCF+C+HCKG L + +YSSM+GVLYCK HF+QL
Sbjct: 824 TQQKCKACDKTVYFVDQLSADGVSYHKTCFRCNHCKGTLKLSNYSSMEGVLYCKPHFDQL 645
Query: 263 FKETGSFSKNF 295
F+E+G+F+KNF
Sbjct: 644 FRESGNFNKNF 612
Score = 105 bits (224), Expect = 5e-022
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +2 / -3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 533 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 354
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 353 SQLFKEKGSYN 321
Score = 102 bits (217), Expect(2) = 2e-044
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -1 / +1
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 322 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 501
Query: 393 QAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q AHLS*VPEN D+LLG LV S +P
Sbjct: 502 QVAHLS*VPENIIDTLLGDLVISGERPSIP 591
Score = 98.2 bits (208), Expect(2) = 2e-044
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -1 / +1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK VLW* TPSA S K T
Sbjct: 613 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQVLW*ETPSADS*STK*T 792
Query: 114 VLSHSAHLSCV 82
VLS + H CV
Sbjct: 793 VLSQALHFCCV 825
>gb|CX652552.1|CX652552 COLD1_59_G09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_G09_A029 5', mRNA sequence
Length = 542
Score = 153 bits (328), Expect(2) = 1e-074
Identities = 57/80 (71%), Positives = 68/80 (85%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 303 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 482
Query: 506 ALNGVLYCKIHFAQLFMEKG 565
AL G+LYCK HF+QLF EKG
Sbjct: 483 ALEGILYCKHHFSQLFKEKG 542
Score = 147 bits (316), Expect(2) = 1e-074
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 36 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 215
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 216 FDQLFRESGNFNKNF 260
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +3
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 27 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 206
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 207 KPHFDQLFRESGNFN 251
Score = 103 bits (220), Expect(2) = 6e-045
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 259 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 80
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 79 VLSQALHFCCVPVK 38
Score = 101 bits (216), Expect = 6e-021
Identities = 35/68 (51%), Positives = 52/68 (76%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 339 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 518
Query: 254 EQLFKETG 277
QLFKE G
Sbjct: 519 SQLFKEKG 542
Score = 98.2 bits (208), Expect(2) = 6e-045
Identities = 51/87 (58%), Positives = 55/87 (63%)
Frame = -1 / -2
Query: 564 PFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAA 385
PFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF Q A
Sbjct: 541 PFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFPQVA 362
Query: 384 HLS*VPENADDSLLGALVSSPLSEDLP 304
HLS*VPEN D+LLG LV S +P
Sbjct: 361 HLS*VPENIIDTLLGDLVISGERPSIP 281
>gb|DT631539.1|DT631539 EST1146470 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF984 3' end, mRNA sequence
Length = 815
Score = 147 bits (316), Expect(2) = 3e-071
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 316 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 495
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 496 FDQLFRESGNFNKNF 540
Score = 142 bits (304), Expect(2) = 3e-071
Identities = 53/76 (69%), Positives = 63/76 (82%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF CSHGGC ++ S+YA
Sbjct: 583 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFTCSHGGCSISPSNYA 762
Query: 506 ALNGVLYCKIHFAQLF 553
AL +LYCK HF+QLF
Sbjct: 763 ALESILYCKHHFSQLF 810
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +1
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 307 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 486
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 487 KPHFDQLFRESGNFN 531
Score = 103 bits (220), Expect(2) = 2e-041
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 539 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 360
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 359 VLSQALHFCCVPVK 318
Score = 86.3 bits (182), Expect(2) = 2e-041
Identities = 47/85 (55%), Positives = 52/85 (61%)
Frame = -1 / -1
Query: 558 SMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHL 379
S+ S K LQY SAA* E + PP EH+KQ LW*D S V FS GY VF Q AHL
Sbjct: 815 SLKSWEK*CLQYSMLSSAA*LEGLIEHPP*EHVKQDLW*DKFSTVTFSRGYAVFPQVAHL 636
Query: 378 S*VPENADDSLLGALVSSPLSEDLP 304
S*VPEN D+LLG LV S +P
Sbjct: 635 S*VPENIIDTLLGDLVISGERPSIP 561
>gb|DR116804.1|DR116804 RTMG1_2_H06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_2_H06_A029 5', mRNA sequence
Length = 838
Score = 147 bits (316), Expect(2) = 2e-069
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 357 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 536
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 537 FDQLFRESGNFNKNF 581
Score = 136 bits (291), Expect(2) = 2e-069
Identities = 50/71 (70%), Positives = 60/71 (84%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 624 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 803
Query: 506 ALNGVLYCKIH 538
AL G+LYCK H
Sbjct: 804 ALEGILYCKHH 836
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +3
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 348 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 527
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 528 KPHFDQLFRESGNFN 572
Score = 103 bits (220), Expect(2) = 3e-042
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 580 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 401
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 400 VLSQALHFCCVPVK 359
Score = 89.0 bits (188), Expect(2) = 3e-042
Identities = 46/76 (60%), Positives = 49/76 (64%)
Frame = -1 / -1
Query: 531 LQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADD 352
LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF Q AHLS*VPEN D
Sbjct: 829 LQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFPQVAHLS*VPENIID 650
Query: 351 SLLGALVSSPLSEDLP 304
+LLG LV S +P
Sbjct: 649 TLLGDLVISGERPSIP 602
>gb|DR683816.1|DR683816 EST1073892 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAL61 3' end, mRNA sequence
Length = 803
Score = 147 bits (316), Expect(3) = 7e-068
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 308 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 487
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 488 FDQLFRESGNFNKNF 532
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +2
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 299 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 478
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 479 KPHFDQLFRESGNFN 523
Score = 103 bits (220), Expect(2) = 3e-038
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 531 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 352
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 351 VLSQALHFCCVPVK 310
Score = 101 bits (216), Expect(3) = 7e-068
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGG 478
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF CSHGG
Sbjct: 575 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFMCSHGG 727
Score = 75.8 bits (159), Expect(2) = 3e-038
Identities = 36/58 (62%), Positives = 39/58 (67%)
Frame = -1 / -3
Query: 477 PPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
PP EH+KQ LW*D S V FS GY VF Q AHLS*VPEN D+LLG LV S +P
Sbjct: 726 PP*EHMKQDLW*DKFSTVTFSRGYAVFPQVAHLS*VPENIIDTLLGDLVISGERPSIP 553
Score = 47.8 bits (98), Expect(3) = 7e-068
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 473 GGCILTTSSYAALNGVLYCKIHFAQLF 553
GGC ++ S+YAAL +LYCK HF+QLF
Sbjct: 723 GGCSISPSNYAALERILYCKHHFSQLF 803
>gb|DR023499.1|DR023499 STRS1_58_C09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_C09_A034 3', mRNA sequence
Length = 835
Score = 146 bits (313), Expect(2) = 2e-065
Identities = 51/94 (54%), Positives = 73/94 (77%)
Frame = +2 / -1
Query: 320 KGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSS 499
+ E+ R PS++S+ FSGTQDKC AC KTVYP+EK+ ++G SYH+ CFKC HGGC+++ S+
Sbjct: 475 ENEVNRTPSRVSALFSGTQDKCVACGKTVYPIEKVVVDGTSYHRPCFKCCHGGCVISPSN 296
Query: 500 YAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
Y A G LYC+ H +QLF EKG++S + K +P++
Sbjct: 295 YVAHEGRLYCRHHSSQLFREKGNFSQLSKATPTK 194
Score = 123 bits (264), Expect(2) = 2e-065
Identities = 43/75 (57%), Positives = 55/75 (73%)
Frame = +2 / -1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GT KC C+KTV+ +D LTAD +HK+CF+C HC G L + +YSS +GVLYCK H
Sbjct: 739 AFAGTTQKCKACEKTVYLVDQLTADNSVFHKSCFRCHHCNGTLKLSNYSSFEGVLYCKPH 560
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 559 FDQLFKRTGSLDKSF 515
Score = 95.0 bits (201), Expect(2) = 9e-031
Identities = 48/90 (53%), Positives = 54/90 (60%)
Frame = -1 / +3
Query: 594 GLFFIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFS 415
G+ F WL LPFS+ S LQY P A * E + QPP +HLKQ W D PS FS
Sbjct: 201 GVAFESWLKLPFSLKS*EL*CLQYSLPS*AT*FEGLMTQPP*QHLKQGRWYDVPSTTTFS 380
Query: 414 SGYTVFWQAAHLS*VPENADDSLLGALVSS 325
GYTVF A HLS VPEN D+LLG L +S
Sbjct: 381 MGYTVFPHATHLSCVPENNADTLLGVLFTS 470
Score = 59.3 bits (123), Expect(2) = 9e-031
Identities = 36/72 (50%), Positives = 40/72 (55%)
Frame = -1 / +3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L KLPV L S SK LQY TPS +E*L ++PLQ K L SAV S K T
Sbjct: 516 KLLSKLPVLLNSWSK*GLQYRTPSNDE*LLSFKVPLQ*WQRKQDL*KTELSAVN*STK*T 695
Query: 114 VLSHSAHLSCVP 79
V SH+ H VP
Sbjct: 696 VFSHALHFWVVP 731
>gb|CO199718.1|CO199718 GEO2_3_C05.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_3_C05_A032 3', mRNA sequence
Length = 901
Score = 156 bits (336), Expect = 2e-037
Identities = 85/168 (50%), Positives = 97/168 (57%)
Frame = -1 / +1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 235 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 414
Query: 402 VFWQAAHLS*VPENADDSLLGALVSSPLSEDLPPGVKFLEKLPVSLKSCSKWVLQYSTPS 223
VF QA H S VPEN ++LLG L+S + K L +LPV LKS SK LQYSTPS
Sbjct: 415 VFPQARHFSCVPENKAETLLGVLISPSFNFSFFTATKLLSRLPVLLKS*SK*GLQYSTPS 594
Query: 222 MEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVP 79
EE*L ++PLQ K L PSAV S +TV SH+ H CVP
Sbjct: 595 KEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYTVFSHALHFCCVP 738
Score = 141 bits (302), Expect(2) = 3e-065
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / -3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 482 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 303
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 302 GRLYCKHHHAQLFKEKGNYSQLIK 231
Score = 128 bits (274), Expect(2) = 3e-065
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / -3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 746 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 567
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 566 FDQLFKRTGSLDKSF 522
Score = 102 bits (218), Expect = 3e-021
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = +2 / -3
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 746 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 567
Query: 539 FAQLFMEKGS 568
F QLF GS
Sbjct: 566 FDQLFKRTGS 537
>gb|CO163161.1|CO163161 FLD1_39_G12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_39_G12_A029 5', mRNA sequence
Length = 829
Score = 141 bits (302), Expect(2) = 3e-065
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +2
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 311 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 490
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 491 GRLYCKHHHAQLFKEKGNYSQLIK 562
Score = 128 bits (274), Expect(2) = 3e-065
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / +2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 35 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 214
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 215 FDQLFKRTGSLDKSF 259
Score = 104 bits (222), Expect = 1e-021
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +2
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 35 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 214
Query: 539 FAQLFMEKGSYSHMMKKSP 595
F QLF GS + +P
Sbjct: 215 FDQLFKRTGSLDKSFEGTP 271
Score = 89.5 bits (189), Expect(2) = 1e-033
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 558 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 379
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 378 VFPQARHFSCVPENKAETLLGVLIS 304
Score = 74.4 bits (156), Expect(2) = 1e-033
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 258 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 79
Query: 114 VLSHSAHLSCVP 79
V SH+ H CVP
Sbjct: 78 VFSHALHFCCVP 43
>gb|CV035130.1|CV035130 RTNACL1_13_F12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_13_F12_A029 5', mRNA sequence
Length = 798
Score = 141 bits (302), Expect(2) = 3e-065
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 330 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 509
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 510 GRLYCKHHHAQLFKEKGNYSQLIK 581
Score = 128 bits (274), Expect(2) = 3e-065
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 54 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 233
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 234 FDQLFKRTGSLDKSF 278
Score = 104 bits (222), Expect = 1e-021
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +3
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 54 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 233
Query: 539 FAQLFMEKGSYSHMMKKSP 595
F QLF GS + +P
Sbjct: 234 FDQLFKRTGSLDKSFEGTP 290
Score = 89.5 bits (189), Expect(2) = 1e-033
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 577 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 398
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 397 VFPQARHFSCVPENKAETLLGVLIS 323
Score = 74.4 bits (156), Expect(2) = 1e-033
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 277 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 98
Query: 114 VLSHSAHLSCVP 79
V SH+ H CVP
Sbjct: 97 VFSHALHFCCVP 62
>gb|DR011028.1|DR011028 HEAT1_2_H06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_2_H06_A029 5', mRNA sequence
Length = 763
Score = 141 bits (302), Expect(2) = 3e-065
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 414 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 593
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 594 GRLYCKHHHAQLFKEKGNYSQLIK 665
Score = 128 bits (274), Expect(2) = 3e-065
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 138 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 317
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 318 FDQLFKRTGSLDKSF 362
Score = 104 bits (222), Expect = 1e-021
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +3
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 138 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 317
Query: 539 FAQLFMEKGSYSHMMKKSP 595
F QLF GS + +P
Sbjct: 318 FDQLFKRTGSLDKSFEGTP 374
Score = 89.5 bits (189), Expect(2) = 1e-033
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 661 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 482
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 481 VFPQARHFSCVPENKAETLLGVLIS 407
Score = 74.4 bits (156), Expect(2) = 1e-033
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 361 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 182
Query: 114 VLSHSAHLSCVP 79
V SH+ H CVP
Sbjct: 181 VFSHALHFCCVP 146
>gb|CF477204.1|CF477204 RTWW3_6_C08.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_6_C08_A022 5', mRNA sequence
Length = 746
Score = 141 bits (302), Expect(2) = 3e-065
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +1
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 337 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 516
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 517 GRLYCKHHHAQLFKEKGNYSQLIK 588
Score = 128 bits (274), Expect(2) = 3e-065
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 61 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 240
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 241 FDQLFKRTGSLDKSF 285
Score = 104 bits (222), Expect = 1e-021
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +1
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 61 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 240
Query: 539 FAQLFMEKGSYSHMMKKSP 595
F QLF GS + +P
Sbjct: 241 FDQLFKRTGSLDKSFEGTP 297
Score = 89.5 bits (189), Expect(2) = 1e-033
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 584 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 405
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 404 VFPQARHFSCVPENKAETLLGVLIS 330
Score = 74.4 bits (156), Expect(2) = 1e-033
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 284 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 105
Query: 114 VLSHSAHLSCVP 79
V SH+ H CVP
Sbjct: 104 VFSHALHFCCVP 69
>gb|CO368907.1|CO368907 RTK1_43_D10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_43_D10_A029 5', mRNA sequence
Length = 726
Score = 141 bits (302), Expect(2) = 3e-065
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +1
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 319 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 498
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 499 GRLYCKHHHAQLFKEKGNYSQLIK 570
Score = 128 bits (274), Expect(2) = 3e-065
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 43 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 222
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 223 FDQLFKRTGSLDKSF 267
Score = 104 bits (222), Expect = 1e-021
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +1
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 43 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 222
Query: 539 FAQLFMEKGSYSHMMKKSP 595
F QLF GS + +P
Sbjct: 223 FDQLFKRTGSLDKSFEGTP 279
Score = 89.5 bits (189), Expect(2) = 1e-033
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 566 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 387
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 386 VFPQARHFSCVPENKAETLLGVLIS 312
Score = 74.4 bits (156), Expect(2) = 1e-033
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 266 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 87
Query: 114 VLSHSAHLSCVP 79
V SH+ H CVP
Sbjct: 86 VFSHALHFCCVP 51
>gb|DR743246.1|DR743246 RTCU1_14_C05.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_14_C05_A029 5', mRNA sequence
Length = 693
Score = 141 bits (302), Expect(2) = 3e-065
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +1
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 307 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 486
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 487 GRLYCKHHHAQLFKEKGNYSQLIK 558
Score = 128 bits (274), Expect(2) = 3e-065
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 31 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 210
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 211 FDQLFKRTGSLDKSF 255
Score = 104 bits (222), Expect = 1e-021
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +1
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 31 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 210
Query: 539 FAQLFMEKGSYSHMMKKSP 595
F QLF GS + +P
Sbjct: 211 FDQLFKRTGSLDKSFEGTP 267
Score = 89.5 bits (189), Expect(2) = 1e-033
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 554 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 375
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 374 VFPQARHFSCVPENKAETLLGVLIS 300
Score = 74.4 bits (156), Expect(2) = 1e-033
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 254 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 75
Query: 114 VLSHSAHLSCVP 79
V SH+ H CVP
Sbjct: 74 VFSHALHFCCVP 39
>gb|CO368683.1|CO368683 RTK1_42_D09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_D09_A029 3', mRNA sequence
Length = 837
Score = 137 bits (293), Expect(2) = 5e-064
Identities = 48/84 (57%), Positives = 67/84 (79%)
Frame = +2 / -2
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC H GC+++ S+Y A+
Sbjct: 494 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHCGCVISPSNYIAIE 315
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 314 GRLYCKHHHAQLFKEKGNYSQLIK 243
Score = 128 bits (274), Expect(2) = 5e-064
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / -2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 770 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 591
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 590 FDQLFKRTGSLDKSF 546
Score = 104 bits (222), Expect = 1e-021
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / -2
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 770 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 591
Query: 539 FAQLFMEKGSYSHMMKKSP 595
F QLF GS + +P
Sbjct: 590 FDQLFKRTGSLDKSFEGTP 534
Score = 101 bits (215), Expect = 9e-021
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +2 / -2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ+KC C TV+ I+ ++ +GV YHK CFKC HC ++S +Y +++G LYCK H
Sbjct: 467 FSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHCGCVISPSNYIAIEGRLYCKHHH 288
Query: 254 EQLFKETGSFSK 289
QLFKE G++S+
Sbjct: 287 AQLFKEKGNYSQ 252
Score = 85.8 bits (181), Expect(2) = 2e-032
Identities = 45/85 (52%), Positives = 51/85 (60%)
Frame = -1 / +1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QP C HLK LW +PS FS G T
Sbjct: 247 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPQCIHLKHALWYPTPSTETFSMG*T 426
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 427 VFPQARHFSCVPENKAETLLGVLIS 501
Score = 74.4 bits (156), Expect(2) = 2e-032
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -1 / +1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 547 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 726
Query: 114 VLSHSAHLSCVP 79
V SH+ H CVP
Sbjct: 727 VFSHALHFCCVP 762
>gb|DT638133.1|DT638133 EST1153064 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHB50 3' end, mRNA sequence
Length = 887
Score = 140 bits (301), Expect(2) = 4e-063
Identities = 49/87 (56%), Positives = 69/87 (79%)
Frame = +2 / +1
Query: 341 PSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGV 520
PS++S+ FSGTQDKC AC KTVYP+EK+ ++G SYH+ CFKC HGGC+++ S+Y A G
Sbjct: 424 PSRVSALFSGTQDKCVACGKTVYPIEKVAVDGTSYHRPCFKCCHGGCVISPSNYVAHEGR 603
Query: 521 LYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
LYC+ H +QLF EKG++S + K +P++
Sbjct: 604 LYCRHHSSQLFREKGNFSQLSKATPTK 684
Score = 122 bits (260), Expect(2) = 4e-063
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GT KC C+KTV+ +D LTAD +HK+CF+C HC G + +YSS +GVLYCK H
Sbjct: 142 AFAGTTQKCKACEKTVYLVDQLTADNSVFHKSCFRCHHCNGTFKLSNYSSFEGVLYCKPH 321
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 322 FDQLFKRTGSLDKSF 366
Score = 91.3 bits (193), Expect(2) = 1e-029
Identities = 46/85 (54%), Positives = 51/85 (60%)
Frame = -1 / -1
Query: 594 GLFFIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFS 415
G+ F WL LPFS+ S LQY P A * E + QPP +HLKQ W D PS FS
Sbjct: 677 GVAFESWLKLPFSLKS*EL*CLQYSLPS*AT*FEGLMTQPP*QHLKQGRWYDVPSTATFS 498
Query: 414 SGYTVFWQAAHLS*VPENADDSLLG 340
GYTVF A HLS VPEN D+LLG
Sbjct: 497 MGYTVFPHATHLSCVPENNADTLLG 423
Score = 59.3 bits (123), Expect(2) = 1e-029
Identities = 36/72 (50%), Positives = 40/72 (55%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L KLPV L S SK LQY TPS +E*L ++PLQ K L SAV S K T
Sbjct: 365 KLLSKLPVLLNSWSK*GLQYRTPSNDE*LLSLKVPLQ*WQRKQDL*KTELSAVN*STK*T 186
Query: 114 VLSHSAHLSCVP 79
V SH+ H VP
Sbjct: 185 VFSHALHFWVVP 150
>gb|DR693161.1|DR693161 EST1083249 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADV56 3' end, mRNA sequence
Length = 760
Score = 140 bits (301), Expect(2) = 4e-063
Identities = 49/87 (56%), Positives = 69/87 (79%)
Frame = +2 / +1
Query: 341 PSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGV 520
PS++S+ FSGTQDKC AC KTVYP+EK+ ++G SYH+ CFKC HGGC+++ S+Y A G
Sbjct: 409 PSRVSALFSGTQDKCVACGKTVYPIEKVAVDGTSYHRPCFKCCHGGCVISPSNYVAHEGR 588
Query: 521 LYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
LYC+ H +QLF EKG++S + K +P++
Sbjct: 589 LYCRHHSSQLFREKGNFSQLSKATPTK 669
Score = 122 bits (260), Expect(2) = 4e-063
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GT KC C+KTV+ +D LTAD +HK+CF+C HC G + +YSS +GVLYCK H
Sbjct: 127 AFAGTTQKCKACEKTVYLVDQLTADNSVFHKSCFRCHHCNGTFKLSNYSSFEGVLYCKPH 306
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 307 FDQLFKRTGSLDKSF 351
Score = 91.3 bits (193), Expect(2) = 1e-029
Identities = 46/85 (54%), Positives = 51/85 (60%)
Frame = -1 / -3
Query: 594 GLFFIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFS 415
G+ F WL LPFS+ S LQY P A * E + QPP +HLKQ W D PS FS
Sbjct: 662 GVAFESWLKLPFSLKS*EL*CLQYSLPS*AT*FEGLMTQPP*QHLKQGRWYDVPSTATFS 483
Query: 414 SGYTVFWQAAHLS*VPENADDSLLG 340
GYTVF A HLS VPEN D+LLG
Sbjct: 482 MGYTVFPHATHLSCVPENNADTLLG 408
Score = 59.3 bits (123), Expect(2) = 1e-029
Identities = 36/72 (50%), Positives = 40/72 (55%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L KLPV L S SK LQY TPS +E*L ++PLQ K L SAV S K T
Sbjct: 350 KLLSKLPVLLNSWSK*GLQYRTPSNDE*LLSLKVPLQ*WQRKQDL*KTELSAVN*STK*T 171
Query: 114 VLSHSAHLSCVP 79
V SH+ H VP
Sbjct: 170 VFSHALHFWVVP 135
>gb|DT638590.1|DT638590 EST1153521 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMHH03 3' end, mRNA sequence
Length = 841
Score = 147 bits (316), Expect(3) = 2e-062
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 375 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 554
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 555 FDQLFRESGNFNKNF 599
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +3
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 366 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 545
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 546 KPHFDQLFRESGNFN 590
Score = 103 bits (220), Expect(2) = 4e-038
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 598 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 419
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 418 VLSQALHFCCVPVK 377
Score = 101 bits (216), Expect(3) = 2e-062
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGG 478
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF CSHGG
Sbjct: 642 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFTCSHGG 794
Score = 75.3 bits (158), Expect(2) = 4e-038
Identities = 36/58 (62%), Positives = 39/58 (67%)
Frame = -1 / -1
Query: 477 PPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
PP EH+KQ LW*D S V FS GY VF Q AHLS*VPEN D+LLG LV S +P
Sbjct: 793 PP*EHVKQDLW*DKFSTVTFSRGYAVFPQVAHLS*VPENIIDTLLGDLVISGERPSIP 620
Score = 29.5 bits (58), Expect(3) = 2e-062
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 473 GGCILTTSSYAALNGVL 523
GGC ++ S+YAAL G+L
Sbjct: 790 GGCSISPSNYAALEGIL 840
>gb|CF672139.1|CF672139 RTCNT1_61_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_61_D05_A029 5', mRNA sequence
Length = 669
Score = 141 bits (302), Expect(2) = 2e-061
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 255 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 434
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 435 GRLYCKHHHAQLFKEKGNYSQLIK 506
Score = 115 bits (246), Expect(2) = 2e-061
Identities = 40/67 (59%), Positives = 50/67 (74%)
Frame = +2 / +3
Query: 95 CAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKET 274
C C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK HF+QLFK T
Sbjct: 3 CKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPHFDQLFKRT 182
Query: 275 GSFSKNF 295
GS K+F
Sbjct: 183 GSLDKSF 203
Score = 89.5 bits (189), Expect(2) = 5e-031
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 502 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 323
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 322 VFPQARHFSCVPENKAETLLGVLIS 248
Score = 65.7 bits (137), Expect(2) = 5e-031
Identities = 36/67 (53%), Positives = 41/67 (61%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 202 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 23
Query: 114 VLSHSAH 94
V SH+ H
Sbjct: 22 VFSHALH 2
>gb|BF518065.1|BF518065 NXSI_030_E12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_030_E12 5' similar to Arabidopsis thaliana
sequence At1g10200 putative transcription factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 531
Score = 135 bits (290), Expect(2) = 2e-060
Identities = 47/84 (55%), Positives = 66/84 (78%)
Frame = +2 / +1
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 259 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISXSNYIAIE 438
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF E +YS ++K
Sbjct: 439 GRLYCKHHHAQLFKEXXNYSQLIK 510
Score = 117 bits (251), Expect(2) = 2e-060
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = +2 / +1
Query: 92 KCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKE 271
KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK HF+QLFK
Sbjct: 4 KCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPHFDQLFKR 183
Query: 272 TGSFSKNF 295
TGS K+F
Sbjct: 184 TGSLDKSF 207
Score = 80.3 bits (169), Expect(2) = 3e-028
Identities = 43/85 (50%), Positives = 49/85 (57%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*L S+ S A LQ P A * + QPPC HLK LW +PS FS G T
Sbjct: 506 ISWL*LXXSLKS*AW*CLQ*SLPSIAI*FXXLITQPPCIHLKHALWYPTPSTETFSMG*T 327
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 326 VFPQARHFSCVPENKAETLLGVLIS 252
Score = 65.7 bits (137), Expect(2) = 3e-028
Identities = 36/67 (53%), Positives = 41/67 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 206 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 27
Query: 114 VLSHSAH 94
V SH+ H
Sbjct: 26 VFSHALH 6
>gb|DR118198.1|DR118198 RTMG1_11_F01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_11_F01_A029 5', mRNA sequence
Length = 654
Score = 128 bits (275), Expect(2) = 4e-060
Identities = 45/78 (57%), Positives = 61/78 (78%)
Frame = +2 / +1
Query: 320 KGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSS 499
+ E+ R PS++S+ FSGTQDKC AC KTVYP+EK+ ++G SYH+ CFKC HGGC+++ S+
Sbjct: 421 ENEVNRTPSRVSALFSGTQDKCVACGKTVYPIEKVAVDGTSYHRPCFKCCHGGCVISPSN 600
Query: 500 YAALNGVLYCKIHFAQLF 553
Y A G LYC+ H +QLF
Sbjct: 601 YVAHEGRLYCRHHTSQLF 654
Score = 123 bits (264), Expect(2) = 4e-060
Identities = 43/75 (57%), Positives = 55/75 (73%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GT KC C+KTV+ +D LTAD +HK+CF+C HC G L + +YSS +GVLYCK H
Sbjct: 157 AFAGTTQKCKACEKTVYLVDQLTADNSVFHKSCFRCHHCNGTLKLSNYSSFEGVLYCKPH 336
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 337 FDQLFKRTGSLDKSF 381
Score = 79.9 bits (168), Expect(2) = 3e-028
Identities = 39/69 (56%), Positives = 43/69 (62%)
Frame = -1 / -2
Query: 531 LQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADD 352
LQY P A * E + QPP +HLKQ W D PS FS GYTVF A HLS VPEN D
Sbjct: 632 LQYSLPS*AT*FEGLMTQPP*QHLKQGRWYDVPSTATFSMGYTVFPHATHLSCVPENNAD 453
Query: 351 SLLGALVSS 325
+LLG L +S
Sbjct: 452 TLLGVLFTS 426
Score = 66.1 bits (138), Expect(2) = 3e-028
Identities = 37/72 (51%), Positives = 41/72 (56%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L KLPV L S SK LQY TPS +E*L ++PLQW K L SAV S K T
Sbjct: 380 KLLSKLPVLLNSWSK*GLQYRTPSNDE*LLSFKVPLQWWQRKQDL*KTELSAVN*STK*T 201
Query: 114 VLSHSAHLSCVP 79
V SH+ H VP
Sbjct: 200 VFSHALHFWVVP 165
>gb|DR078368.1|DR078368 RTFEPL1_3_E07.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_3_E07_A029 5', mRNA sequence
Length = 712
Score = 166 bits (356), Expect(2) = 2e-059
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2 / -3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 542 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 363
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 362 ALEGILYCKHHFSQLFKEKGSYNHLIK 282
Score = 105 bits (224), Expect = 5e-022
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +2 / -3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 506 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 327
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 326 SQLFKEKGSYN 294
Score = 102 bits (217), Expect(2) = 8e-035
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -1 / +1
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 295 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 474
Query: 393 QAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q AHLS*VPEN D+LLG LV S +P
Sbjct: 475 QVAHLS*VPENIIDTLLGDLVISGERPSIP 564
Score = 84.0 bits (177), Expect(2) = 2e-059
Identities = 28/42 (66%), Positives = 38/42 (90%)
Frame = +2 / -3
Query: 170 FKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
F+C+HCKG L + +YSSM+GVLYCK HF+QLF+E+G+F+KNF
Sbjct: 710 FRCNHCKGTLKLSNYSSMEGVLYCKPHFDQLFRESGNFNKNF 585
Score = 65.7 bits (137), Expect(2) = 8e-035
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = -1 / +1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLK 169
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK
Sbjct: 586 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLK 711
>gb|DR744517.1|DR744517 RTCU1_23_B05.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_B05_A029 3', mRNA sequence
Length = 789
Score = 166 bits (356), Expect(3) = 2e-058
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 157 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 336
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 337 ALEGILYCKHHFSQLFKEKGSYNHLIK 417
Score = 105 bits (224), Expect = 5e-022
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +2 / +1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 193 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 372
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 373 SQLFKEKGSYN 405
Score = 102 bits (217), Expect(2) = 2e-030
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -1 / -2
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 404 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 225
Query: 393 QAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q AHLS*VPEN D+LLG LV S +P
Sbjct: 224 QVAHLS*VPENIIDTLLGDLVISGERPSIP 135
Score = 75.8 bits (159), Expect(3) = 2e-058
Identities = 26/38 (68%), Positives = 34/38 (89%)
Frame = +2 / +1
Query: 182 HCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
HCKG L + +YSSM+GVLYCK HF+QLF+E+G+F+KNF
Sbjct: 1 HCKGTLKLSNYSSMEGVLYCKPHFDQLFRESGNFNKNF 114
Score = 51.0 bits (105), Expect(2) = 2e-030
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQ 184
KFL KLP+SLKS SK LQYSTPS++E*L +PLQ
Sbjct: 113 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQ 3
Score = 28.1 bits (55), Expect(3) = 2e-058
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1 / +1
Query: 745 VCVCHFSFLFLYDASLFPPFIYLSVNSVCR 834
+CV + Y FP +IY ++ VCR
Sbjct: 664 LCVSDIGSAYYYGLQKFPKYIYYQLS*VCR 753
>gb|BF518064.1|BF518064 NXSI_030_E11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_030_E11 5' similar to Arabidopsis thaliana
sequence At1g10200 putative transcription factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 522
Score = 127 bits (272), Expect(2) = 6e-058
Identities = 44/82 (53%), Positives = 61/82 (74%)
Frame = +2 / +1
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++E YH CFKC HGGC+++ S+Y A+
Sbjct: 259 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEXVGYHXXCFKCMHGGCVISXSNYIAIE 438
Query: 515 GVLYCKIHFAQLFMEKGSYSHM 580
G LYCK H AQLF E +YS +
Sbjct: 439 GXLYCKHHHAQLFKEXXNYSQL 504
Score = 117 bits (251), Expect(2) = 6e-058
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = +2 / +1
Query: 92 KCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKE 271
KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK HF+QLFK
Sbjct: 4 KCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPHFDQLFKR 183
Query: 272 TGSFSKNF 295
TGS K+F
Sbjct: 184 TGSLDKSF 207
Score = 73.0 bits (153), Expect(2) = 4e-026
Identities = 40/83 (48%), Positives = 46/83 (55%)
Frame = -1 / -2
Query: 576 WL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVF 397
WL*L S+ S A LQ P A * + QPPC HLK W + S FS G TVF
Sbjct: 500 WL*LXXSLKS*AW*CLQ*XXPSIAI*FXXLITQPPCIHLKHXXWYPTXSTETFSMG*TVF 321
Query: 396 WQAAHLS*VPENADDSLLGALVS 328
QA H S VPEN ++LLG L+S
Sbjct: 320 PQARHFSCVPENKAETLLGVLIS 252
Score = 65.7 bits (137), Expect(2) = 4e-026
Identities = 36/67 (53%), Positives = 41/67 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 206 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 27
Query: 114 VLSHSAH 94
V SH+ H
Sbjct: 26 VFSHALH 6
>gb|AW869996.1|AW869996 NXNV_120_G12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_120_G12 5' similar to Arabidopsis thaliana
sequence At1g10200 putative transcription factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 530
Score = 122 bits (261), Expect(2) = 2e-056
Identities = 43/71 (60%), Positives = 53/71 (74%)
Frame = +2 / +3
Query: 83 TQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQL 262
TQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK HF+QL
Sbjct: 3 TQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPHFDQL 182
Query: 263 FKETGSFSKNF 295
FK TGS K+F
Sbjct: 183 FKRTGSLDKSF 215
Score = 117 bits (251), Expect(2) = 2e-056
Identities = 41/83 (49%), Positives = 60/83 (72%)
Frame = +2 / +3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 267 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIX 446
Query: 515 GVLYCKIHFAQLFMEKGSYSHMM 583
Y H AQLF E +Y ++
Sbjct: 447 XXXYXXHHHAQLFKEXXNYXXLI 515
Score = 71.2 bits (149), Expect(2) = 9e-027
Identities = 38/71 (53%), Positives = 43/71 (60%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 214 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 35
Query: 114 VLSHSAHLSCV 82
V SH+ H CV
Sbjct: 34 VFSHALHFCCV 2
Score = 69.8 bits (146), Expect(2) = 9e-027
Identities = 39/81 (48%), Positives = 45/81 (55%)
Frame = -1 / -2
Query: 570 *LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQ 391
*L S+ S A Q A * E + QPPC HLK LW +PS FS G TVF Q
Sbjct: 502 *LXXSLKS*AW*CXQXXXXXIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*TVFPQ 323
Query: 390 AAHLS*VPENADDSLLGALVS 328
A H S VPEN ++LLG L+S
Sbjct: 322 ARHFSCVPENKAETLLGVLIS 260
>gb|AA556813.1|AA556813 655 Loblolly pine C Pinus taeda cDNA clone 6C12H, mRNA sequence
Length = 677
Score = 137 bits (293), Expect(2) = 4e-056
Identities = 48/84 (57%), Positives = 66/84 (78%)
Frame = +2 / +3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 234 KTPNRVSALFSGTQXKCLACGNTVYPIEKVSVEGVGYHKACFKCXHGGCVISPSNYIAIX 413
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF E G+YS ++K
Sbjct: 414 GRLYCKHHHAQLFKEXGNYSQLIK 485
Score = 102 bits (217), Expect(2) = 4e-056
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +2 / +3
Query: 116 VHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
V+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK HF+QLFK TGS K+F
Sbjct: 3 VYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPHFDQLFKXTGSLDKSF 182
Score = 90.0 bits (190), Expect(2) = 4e-028
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 481 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCXHLKHALWYPTPSTETFSMG*T 302
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 301 VFPQARHXSCVPENKAETLLGVLIS 227
Score = 55.6 bits (115), Expect(2) = 4e-028
Identities = 32/60 (53%), Positives = 36/60 (60%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 181 KLLSRLPVXLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 2
>gb|DR015870.1|DR015870 STRS1_6_E08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_E08_A034 3', mRNA sequence
Length = 880
Score = 147 bits (316), Expect(2) = 8e-055
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / -3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 404 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 225
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 224 FDQLFRESGNFNKNF 180
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / -3
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 413 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 234
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 233 KPHFDQLFRESGNFN 189
Score = 103 bits (220), Expect(2) = 2e-035
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / +1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 181 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 360
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 361 VLSQALHFCCVPVK 402
Score = 87.2 bits (184), Expect(2) = 8e-055
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2 / -3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCF 460
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF
Sbjct: 137 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCF 3
Score = 66.1 bits (138), Expect(2) = 2e-035
Identities = 33/53 (62%), Positives = 35/53 (66%)
Frame = -1 / +1
Query: 462 LKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
LKQ LW*D S V FS GY VF Q AHLS*VPEN D+LLG LV S +P
Sbjct: 1 LKQDLW*DKFSTVTFSRGYAVFPQVAHLS*VPENIIDTLLGDLVISGERPSIP 159
>gb|DR047460.1|DR047460 RTBOR1_1_E07.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_1_E07_A029 3', mRNA sequence
Length = 767
Score = 147 bits (316), Expect(2) = 8e-055
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / -3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 402 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 223
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 222 FDQLFRESGNFNKNF 178
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / -3
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 411 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 232
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 231 KPHFDQLFRESGNFN 187
Score = 103 bits (220), Expect(2) = 8e-035
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / +2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 179 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 358
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 359 VLSQALHFCCVPVK 400
Score = 87.2 bits (184), Expect(2) = 8e-055
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +2 / -3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCF 460
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF
Sbjct: 135 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCF 1
Score = 64.3 bits (134), Expect(2) = 8e-035
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = -1 / +2
Query: 459 KQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
KQ LW*D S V FS GY VF Q AHLS*VPEN D+LLG LV S +P
Sbjct: 2 KQDLW*DKFSTVTFSRGYAVFPQVAHLS*VPENIIDTLLGDLVISGERPSIP 157
>gb|DR694258.1|DR694258 EST1084349 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEA11 3' end, mRNA sequence
Length = 766
Score = 147 bits (316), Expect(2) = 5e-054
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 367 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 546
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 547 FDQLFRESGNFNKNF 591
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +1
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 358 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 537
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 538 KPHFDQLFRESGNFN 582
Score = 103 bits (220), Expect(2) = 4e-034
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 590 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 411
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 410 VLSQALHFCCVPVK 369
Score = 84.5 bits (178), Expect(2) = 5e-054
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSC 457
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSC
Sbjct: 634 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSC 765
Score = 62.0 bits (129), Expect(2) = 4e-034
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = -1 / -3
Query: 456 QLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q LW*D S V FS GY VF Q AHLS*VPEN D+LLG LV S +P
Sbjct: 764 QDLW*DKFSTVTFSRGYAVFPQVAHLS*VPENIIDTLLGDLVISGERPSIP 612
>gb|CF390163.1|CF390163 RTDR2_12_E06.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_12_E06_A021 5', mRNA
sequence
Length = 671
Score = 147 bits (316), Expect(2) = 5e-054
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 272 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 451
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 452 FDQLFRESGNFNKNF 496
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +2
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 263 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 442
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 443 KPHFDQLFRESGNFN 487
Score = 103 bits (220), Expect(2) = 4e-034
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 495 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 316
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 315 VLSQALHFCCVPVK 274
Score = 84.5 bits (178), Expect(2) = 5e-054
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSC 457
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSC
Sbjct: 539 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSC 670
Score = 62.0 bits (129), Expect(2) = 4e-034
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = -1 / -3
Query: 456 QLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q LW*D S V FS GY VF Q AHLS*VPEN D+LLG LV S +P
Sbjct: 669 QDLW*DKFSTVTFSRGYAVFPQVAHLS*VPENIIDTLLGDLVISGERPSIP 517
>gb|BE520108.1|BE520108 NXCI_016_H09_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_016_H09 5' similar to Arabidopsis
thaliana sequence At1g10200 putative transcription
factor see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 533
Score = 128 bits (274), Expect(2) = 7e-054
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 46 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 225
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 226 FDQLFKRTGSLDKSF 270
Score = 104 bits (222), Expect = 1e-021
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +1
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 46 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 225
Query: 539 FAQLFMEKGSYSHMMKKSP 595
F QLF GS + +P
Sbjct: 226 FDQLFKRTGSLDKSFEGTP 282
Score = 103 bits (219), Expect(2) = 7e-054
Identities = 35/64 (54%), Positives = 48/64 (75%)
Frame = +2 / +1
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK++ EG YHK+CFKC HGGC++ S+Y A
Sbjct: 322 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSXEGVGYHKACFKCMHGGCVIXXSNYIAXX 501
Query: 515 GVLY 526
LY
Sbjct: 502 XXLY 513
Score = 74.4 bits (156), Expect(2) = 1e-027
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 269 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 90
Query: 114 VLSHSAHLSCVP 79
V SH+ H CVP
Sbjct: 89 VFSHALHFCCVP 54
Score = 69.3 bits (145), Expect(2) = 1e-027
Identities = 33/60 (55%), Positives = 37/60 (61%)
Frame = -1 / -1
Query: 507 AA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVS 328
A * E QPPC HLK LW +PS FS G TVF QA H S VPEN ++LLG L+S
Sbjct: 494 AI*FEXXITQPPCIHLKHALWYPTPSXETFSMG*TVFPQARHFSCVPENKAETLLGVLIS 315
>gb|CX653219.1|CX653219 COLD1_64_D11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_64_D11_A029 3', mRNA sequence
Length = 770
Score = 166 bits (356), Expect(3) = 6e-053
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC ++ S+YA
Sbjct: 126 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYA 305
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 306 ALEGILYCKHHFSQLFKEKGSYNHLIK 386
Score = 105 bits (224), Expect = 5e-022
Identities = 36/71 (50%), Positives = 55/71 (77%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH +S +Y++++G+LYCK HF
Sbjct: 162 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCSISPSNYAALEGILYCKHHF 341
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 342 SQLFKEKGSYN 374
Score = 102 bits (217), Expect(2) = 2e-028
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -1 / -2
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 373 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIEHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 194
Query: 393 QAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q AHLS*VPEN D+LLG LV S +P
Sbjct: 193 QVAHLS*VPENIIDTLLGDLVISGERPSIP 104
Score = 57.4 bits (119), Expect(3) = 6e-053
Identities = 20/27 (74%), Positives = 26/27 (96%)
Frame = +2 / +3
Query: 215 SSMDGVLYCKTHFEQLFKETGSFSKNF 295
SSM+GVLYCK HF+QLF+E+G+F+KNF
Sbjct: 3 SSMEGVLYCKPHFDQLFRESGNFNKNF 83
Score = 44.1 bits (90), Expect(2) = 2e-028
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE 214
KFL KLP+SLKS SK LQYSTPS++E
Sbjct: 82 KFLLKLPLSLKSWSK*GLQYSTPSIDE 2
Score = 28.1 bits (55), Expect(3) = 6e-053
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1 / +3
Query: 745 VCVCHFSFLFLYDASLFPPFIYLSVNSVCR 834
+CV + Y FP +IY ++ VCR
Sbjct: 633 LCVSDIGSAYYYGLQKFPKYIYYQLS*VCR 722
>gb|BF220863.1|BF220863 NXCI_155_A01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_155_A01 5' similar to Arabidopsis
thaliana sequence At1g10200 putative transcription
factor see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 538
Score = 128 bits (274), Expect(2) = 4e-051
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +2 / +2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GTQ KC C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK H
Sbjct: 65 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 244
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK TGS K+F
Sbjct: 245 FDQLFKRTGSLDKSF 289
Score = 104 bits (222), Expect = 1e-021
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2 / +2
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
AF+GTQ KC AC+KTVY +++LT +G +HK+CF+C H L S+Y++ GVLYCK H
Sbjct: 65 AFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPH 244
Query: 539 FAQLFMEKGSYSHMMKKSP 595
F QLF GS + +P
Sbjct: 245 FDQLFKRTGSLDKSFEGTP 301
Score = 94.1 bits (199), Expect(2) = 4e-051
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +2 / +2
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC A TVYP+E ++ YH CFKC HGGC++ S+Y A+
Sbjct: 341 KTPNRVSALFSGTQEKCLAYGNTVYPIEXXSVXXVGYHXXCFKCMHGGCVIXPSNYIAIE 520
Query: 515 GVLYCK 532
LYCK
Sbjct: 521 XXLYCK 538
Score = 74.4 bits (156), Expect(2) = 8e-023
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 288 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 109
Query: 114 VLSHSAHLSCVP 79
V SH+ H CVP
Sbjct: 108 VFSHALHFCCVP 73
Score = 53.3 bits (110), Expect(2) = 8e-023
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = -1 / -2
Query: 480 QPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVS 328
QPPC HLK W + FS G TV A H S VPEN ++LLG L+S
Sbjct: 486 QPPCIHLKHXXWYPTXXTEXFSMG*TVXP*ARHFSCVPENKAETLLGVLIS 334
>gb|DR058934.1|DR058934 RTNIT1_14_F04.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_14_F04_A029 5', mRNA sequence
Length = 659
Score = 141 bits (302), Expect(2) = 1e-050
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 183 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 362
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 363 GRLYCKHHHAQLFKEKGNYSQLIK 434
Score = 89.5 bits (189), Expect(2) = 1e-025
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 430 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 251
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 250 VFPQARHFSCVPENKAETLLGVLIS 176
Score = 79.4 bits (167), Expect(2) = 1e-050
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +2 / +3
Query: 167 CFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
CF+C HC G L + +YSS +GVLYCK HF+QLFK TGS K+F
Sbjct: 3 CFRCHHCNGTLKLSNYSSFEGVLYCKPHFDQLFKRTGSLDKSF 131
Score = 47.8 bits (98), Expect(2) = 1e-025
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQ 184
K L +LPV LKS SK LQYSTPS EE*L ++PLQ
Sbjct: 130 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ 20
>gb|DR059266.1|DR059266 RTNIT1_16_E05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_16_E05_A029 5', mRNA sequence
Length = 585
Score = 141 bits (302), Expect(2) = 1e-050
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +2
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 185 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 364
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 365 GRLYCKHHHAQLFKEKGNYSQLIK 436
Score = 89.5 bits (189), Expect(2) = 1e-025
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 432 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 253
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 252 VFPQARHFSCVPENKAETLLGVLIS 178
Score = 79.4 bits (167), Expect(2) = 1e-050
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +2 / +2
Query: 167 CFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
CF+C HC G L + +YSS +GVLYCK HF+QLFK TGS K+F
Sbjct: 5 CFRCHHCNGTLKLSNYSSFEGVLYCKPHFDQLFKRTGSLDKSF 133
Score = 47.8 bits (98), Expect(2) = 1e-025
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQ 184
K L +LPV LKS SK LQYSTPS EE*L ++PLQ
Sbjct: 132 KLLSRLPVLLKS*SK*GLQYSTPSKEE*LLSFKVPLQ 22
>gb|DR109623.1|DR109623 RTS1_3_C05.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_3_C05_A029 5', mRNA sequence
Length = 762
Score = 147 bits (316), Expect(2) = 2e-050
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 376 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 555
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 556 FDQLFRESGNFNKNF 600
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +1
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 367 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 546
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 547 KPHFDQLFRESGNFN 591
Score = 103 bits (220), Expect(2) = 6e-032
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 599 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 420
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 419 VLSQALHFCCVPVK 378
Score = 72.5 bits (152), Expect(2) = 2e-050
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESY 445
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SY
Sbjct: 643 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSY 762
Score = 54.7 bits (113), Expect(2) = 6e-032
Identities = 28/47 (59%), Positives = 30/47 (63%)
Frame = -1 / -2
Query: 444 *DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
*D S V FS GY VF Q AHLS*VPEN D+LLG LV S +P
Sbjct: 761 *DKFSTVTFSRGYAVFPQVAHLS*VPENIIDTLLGDLVISGERPSIP 621
>gb|BX678795.1|BX678795 BX678795 RS Pinus pinaster cDNA clone RS15C02, mRNA sequence
Length = 576
Score = 120 bits (257), Expect(2) = 2e-050
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GT KC C+KTV+ +D LTAD +HK+CF+C HC G L + +YSS +GVLYCK H
Sbjct: 147 AFAGTTQKCKACEKTVYLVDQLTADNSVFHKSCFRCHHCNGTLKLSNYSSFEGVLYCKPH 326
Query: 251 FEQLFKETGSFSKNFTPGGKSSDK 322
F+QLFK TGS +F ++S K
Sbjct: 327 FDQLFKRTGSLG*SFEAIPRASRK 398
Score = 99.6 bits (211), Expect(2) = 2e-050
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +2 / +1
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCIL 487
R PS++S+ FSGTQDKC AC KTVYP+EK+ ++G SYH+ CFKC HGGC++
Sbjct: 424 RTPSRVSALFSGTQDKCVACGKTVYPIEKVAVDGTSYHRPCFKCCHGGCVI 576
Score = 71.2 bits (149), Expect(2) = 8e-023
Identities = 32/51 (62%), Positives = 34/51 (66%)
Frame = -1 / -2
Query: 480 QPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVS 328
QPP +HLKQ W D PS FS GYTVF A HLS VPEN D+LLG L S
Sbjct: 569 QPP*QHLKQGRWYDVPSTATFSMGYTVFPHATHLSCVPENNADTLLGVLFS 417
Score = 56.5 bits (117), Expect(2) = 8e-023
Identities = 35/72 (48%), Positives = 39/72 (54%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K KLPV L S SK LQY TPS +E*L ++PLQ K L SAV S K T
Sbjct: 370 KLYPKLPVLLNSWSK*GLQYRTPSNDE*LLSFKVPLQ*WQRKQDL*KTELSAVN*STK*T 191
Query: 114 VLSHSAHLSCVP 79
V SH+ H VP
Sbjct: 190 VFSHALHFWVVP 155
>gb|DR168155.1|DR168155 RTPHOS1_23_C06.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_23_C06_A029 5', mRNA sequence
Length = 612
Score = 147 bits (316), Expect(2) = 2e-049
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 234 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 413
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 414 FDQLFRESGNFNKNF 458
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +3
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 225 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 404
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 405 KPHFDQLFRESGNFN 449
Score = 103 bits (220), Expect(2) = 1e-031
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 457 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 278
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 277 VLSQALHFCCVPVK 236
Score = 68.9 bits (144), Expect(2) = 2e-049
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLE 433
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E
Sbjct: 501 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVE 608
Score = 53.3 bits (110), Expect(2) = 1e-031
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = -1 / -3
Query: 432 SRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
S V FS GY VF Q AHLS*VPEN D+LLG LV S +P
Sbjct: 607 STVTFSRGYAVFPQVAHLS*VPENIIDTLLGDLVISGERPSIP 479
>gb|CX653292.1|CX653292 COLD1_64_D11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_64_D11_A029 5', mRNA sequence
Length = 767
Score = 147 bits (316), Expect(2) = 3e-046
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 410 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 589
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 590 FDQLFRESGNFNKNF 634
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +2
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 401 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 580
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 581 KPHFDQLFRESGNFN 625
Score = 103 bits (220), Expect(2) = 2e-029
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 633 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 454
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 453 VLSQALHFCCVPVK 412
Score = 58.8 bits (122), Expect(2) = 3e-046
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPL 415
E+TR+PSK+S FSGTQDKCA C KT YPL
Sbjct: 677 EMTRSPSKVSMMFSGTQDKCATCGKTAYPL 766
Score = 46.0 bits (94), Expect(2) = 2e-029
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = -1 / -3
Query: 411 GYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
GY VF Q AHLS*VPEN D+LLG LV S +P
Sbjct: 762 GYAVFPQVAHLS*VPENIIDTLLGDLVISGERPSIP 655
>gb|BE644138.1|BE644138 NXCI_054_H09_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_054_H09 5' similar to Arabidopsis
thaliana sequence At3g55770 transcription factor L2 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 407
Score = 147 bits (316), Expect(2) = 4e-044
Identities = 51/75 (68%), Positives = 66/75 (88%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+FTGTQ KC CDKTV+F+D L+ADGV+YHK CF+C+HCKG L + +YSSM+GVLYCK H
Sbjct: 27 AFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYCKPH 206
Query: 251 FEQLFKETGSFSKNF 295
F+QLF+E+G+F+KNF
Sbjct: 207 FDQLFRESGNFNKNF 251
Score = 107 bits (228), Expect = 1e-022
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = +2 / +3
Query: 350 LSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 529
++ AF+GTQ KC AC KTVY +++L+ +G SYHK+CF+C+H L S+Y+++ GVLYC
Sbjct: 18 VAMAFTGTQQKCKACDKTVYFVDQLSADGVSYHKACFRCNHCKGTLKLSNYSSMEGVLYC 197
Query: 530 KIHFAQLFMEKGSYS 574
K HF QLF E G+++
Sbjct: 198 KPHFDQLFRESGNFN 242
Score = 103 bits (220), Expect(2) = 8e-029
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
KFL KLP+SLKS SK LQYSTPS++E*L +PLQWLHLK LW* TPSA S K T
Sbjct: 250 KFLLKLPLSLKSWSK*GLQYSTPSIDE*LLSLSVPLQWLHLKQALW*ETPSADS*STK*T 71
Query: 114 VLSHSAHLSCVPVK 73
VLS + H CVPVK
Sbjct: 70 VLSQALHFCCVPVK 29
Score = 51.5 bits (106), Expect(2) = 4e-044
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLE 433
E+TR+PSK+S FSGTQDKCA C KT T E
Sbjct: 294 EMTRSPSKVSMMFSGTQDKCATCGKTAXXXXXXTXE 401
Score = 44.1 bits (90), Expect(2) = 8e-029
Identities = 23/43 (53%), Positives = 25/43 (58%)
Frame = -1 / -2
Query: 432 SRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLP 304
S V S Y VF AHLS*VPEN D+LLG LV S +P
Sbjct: 400 SXVXXSXXYAVFPXVAHLS*VPENIIDTLLGDLVISGERPSIP 272
>gb|CO364769.1|CO364769 RTK1_21_E05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_21_E05_A029 5', mRNA sequence
Length = 841
Score = 146 bits (313), Expect(2) = 7e-044
Identities = 51/94 (54%), Positives = 73/94 (77%)
Frame = +2 / +1
Query: 320 KGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSS 499
+ E+ R PS++S+ FSGTQDKC AC KTVYP+EK+ ++G SYH+ CFKC HGGC+++ S+
Sbjct: 121 ENEVNRTPSRVSALFSGTQDKCVACGKTVYPIEKVAVDGTSYHRPCFKCCHGGCVISPSN 300
Query: 500 YAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
Y A G LYC+ H +QLF EKG++S + K +P++
Sbjct: 301 YVAHEGRLYCRHHSSQLFREKGNFSQLSKATPTK 402
Score = 95.0 bits (201), Expect(2) = 5e-023
Identities = 48/90 (53%), Positives = 54/90 (60%)
Frame = -1 / -3
Query: 594 GLFFIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFS 415
G+ F WL LPFS+ S LQY P A * E + QPP +HLKQ W D PS FS
Sbjct: 395 GVAFESWLKLPFSLKS*EL*CLQYSLPS*AT*FEGLMTQPP*QHLKQGRWYDVPSTATFS 216
Query: 414 SGYTVFWQAAHLS*VPENADDSLLGALVSS 325
GYTVF A HLS VPEN D+LLG L +S
Sbjct: 215 MGYTVFPHATHLSCVPENNADTLLGVLFTS 126
Score = 51.9 bits (107), Expect(2) = 7e-044
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +2 / +1
Query: 215 SSMDGVLYCKTHFEQLFKETGSFSKNF 295
SS +GVLYCK HF+QLFK TGS K+F
Sbjct: 1 SSFEGVLYCKPHFDQLFKRTGSLDKSF 81
Score = 33.1 bits (66), Expect(2) = 5e-023
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPS 223
K L KLPV L S SK LQY TPS
Sbjct: 80 KLLSKLPVLLNSWSK*GLQYRTPS 9
>gb|BE496519.1|BE496519 NXCI_020_A11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_020_A11 5' similar to Arabidopsis
thaliana sequence At1g10200 putative transcription
factor see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 406
Score = 108 bits (230), Expect(2) = 1e-043
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = +2 / +2
Query: 95 CAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKET 274
C C+KTV+ +D LTAD +HK+ F+C HC G L + +YSS +GVLYCK HF+QLFK T
Sbjct: 2 CKACEKTVYLVDQLTADNSVFHKSXFRCHHCNGTLKLXNYSSFEGVLYCKPHFDQLFKRT 181
Query: 275 GSFSKNF 295
GS K+F
Sbjct: 182 GSLDKSF 202
Score = 89.5 bits (189), Expect(2) = 1e-043
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2 / +2
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCIL 487
R PS++S FSGTQ KC AC KTVYP+ ++G SYH+ CFKC HGGC++
Sbjct: 254 RTPSRVSXLFSGTQXKCVACGKTVYPIXXXAVDGTSYHRPCFKCCHGGCVI 406
>gb|BM903420.1|BM903420 NXRV_041_C08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_041_C08 5' similar to Arabidopsis thaliana
sequence At1g10200 putative transcription factor see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 416
Score = 104 bits (222), Expect(2) = 2e-042
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +2 / +3
Query: 104 CDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSF 283
C+KTV+ +D LTADG +HK CF+C HC G L + +YSS +GVLYCK HF LFK TG
Sbjct: 9 CEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKPHFXXLFKRTGXL 188
Query: 284 SKNF 295
K F
Sbjct: 189 DKIF 200
Score = 89.0 bits (188), Expect(2) = 2e-042
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +2 / +3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSS 499
+ P+++S+ FSGTQ KC AC T YP+EK+++EG YHK+CFKC HGGC S+
Sbjct: 252 KTPNRVSALFSGTQKKCLACGNTXYPIEKVSVEGVGYHKACFKCMHGGCXXXPSN 416
Score = 62.5 bits (130), Expect(2) = 3e-021
Identities = 28/51 (54%), Positives = 31/51 (60%)
Frame = -1 / -2
Query: 480 QPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVS 328
QPPC HLK LW +PS FS G VF QA H VPEN ++LLG L S
Sbjct: 397 QPPCIHLKHALWYPTPSTETFSMG*XVFPQARHFFCVPENKAETLLGVLXS 245
Score = 59.7 bits (124), Expect(2) = 3e-021
Identities = 34/65 (52%), Positives = 38/65 (58%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L PV LKS SK LQYSTPS EE*L ++PLQ K L PSAV S +T
Sbjct: 199 KILSXXPVLLKSXSK*GLQYSTPSKEE*LLSFKVPLQ*WQRKQAL*KTEPSAVS*STTYT 20
Query: 114 VLSHS 100
V SH+
Sbjct: 19 VFSHA 5
>gb|CO368835.1|CO368835 RTK1_43_D10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_43_D10_A029 3', mRNA sequence
Length = 831
Score = 141 bits (302), Expect(2) = 3e-041
Identities = 49/84 (58%), Positives = 68/84 (80%)
Frame = +2 / +3
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN 514
+ P+++S+ FSGTQ+KC AC TVYP+EK+++EG YHK+CFKC HGGC+++ S+Y A+
Sbjct: 126 KTPNRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKACFKCMHGGCVISPSNYIAIE 305
Query: 515 GVLYCKIHFAQLFMEKGSYSHMMK 586
G LYCK H AQLF EKG+YS ++K
Sbjct: 306 GRLYCKHHHAQLFKEKGNYSQLIK 377
Score = 89.5 bits (189), Expect(2) = 5e-022
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ S A LQ P A * E + QPPC HLK LW +PS FS G T
Sbjct: 373 ISWL*LPFSLKS*AW*CLQ*SLPSIAI*FEGLITQPPCIHLKHALWYPTPSTETFSMG*T 194
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QA H S VPEN ++LLG L+S
Sbjct: 193 VFPQARHFSCVPENKAETLLGVLIS 119
Score = 48.3 bits (99), Expect(2) = 3e-041
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2 / +3
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GVLYCK HF+QLFK TGS K+F
Sbjct: 3 EGVLYCKPHFDQLFKRTGSLDKSF 74
Score = 35.4 bits (71), Expect(2) = 5e-022
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPS 223
K L +LPV LKS SK LQYSTPS
Sbjct: 73 KLLSRLPVLLKS*SK*GLQYSTPS 2
>gb|AW064614.1|AW064614 ST33F07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST33F07, mRNA sequence
Length = 592
Score = 167 bits (360), Expect = 9e-041
Identities = 61/87 (70%), Positives = 76/87 (87%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
E+TR+PSK+S FSGTQDKCA C KT YPLEK+T+E SYHKSCF+CSHGGC+++ S+YA
Sbjct: 47 EMTRSPSKVSMMFSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCLISPSNYA 226
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 227 ALEGILYCKHHFSQLFKEKGSYNHLIK 307
Score = 107 bits (228), Expect = 1e-022
Identities = 36/71 (50%), Positives = 56/71 (78%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + ++YHK+CF+CSH ++S +Y++++G+LYCK HF
Sbjct: 83 FSGTQDKCATCGKTAYPLEKVTVENLSYHKSCFRCSHGGCLISPSNYAALEGILYCKHHF 262
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 263 SQLFKEKGSYN 295
Score = 102 bits (218), Expect = 3e-021
Identities = 54/90 (60%), Positives = 58/90 (64%)
Frame = -1 / -2
Query: 573 L*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFW 394
L*LPFS+ S K LQY P SAA* E + PP EHLKQ LW*D S V FS GY VF
Sbjct: 294 L*LPFSLKSWEK*CLQYSMPSSAA*LEGLIKHPP*EHLKQDLW*DKFSTVTFSRGYAVFP 115
Query: 393 QAAHLS*VPENADDSLLGALVSSPLSEDLP 304
Q AHLS*VPEN D+LLG LV S +P
Sbjct: 114 QVAHLS*VPENIIDTLLGDLVISGERPSIP 25
>gb|CX651270.1|CX651270 COLD1_51_F10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_51_F10_A029 3', mRNA sequence
Length = 501
Score = 114 bits (244), Expect(2) = 3e-039
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +2 / -1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
+F GT KC C+KTV+ +D LTAD +HK+CF+C C G L + +YSS +GVLYCK H
Sbjct: 390 AFAGTTQKCKACEKTVYLVDQLTADNSVFHKSCFRCHLCHGTLKLTNYSSFEGVLYCKPH 211
Query: 251 FEQLFKETGSFSKNF 295
F+QLFK T S K+F
Sbjct: 210 FDQLFKRTRSLDKSF 166
Score = 68.0 bits (142), Expect(2) = 3e-039
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2 / -1
Query: 335 RAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYH 448
R P ++S+ FSGTQDKC AC KTVYP+EK+ ++G SYH
Sbjct: 114 RTPIRVSALFSGTQDKCVACGKTVYPIEKVAVDGTSYH 1
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 473,630,941
Number of Sequences: 355925
Number of extensions: 6352945
Number of successful extensions: 45513
Number of sequences better than 1.0e-020: 163
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 14836596440
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)