TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3742548.2.1
(554 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF672051.1|CF672051 RTCNT1_61_B08.b1_A029 Root control P... 158 3e-038
gb|CF667857.1|CF667857 RTCNT1_33_A02.b1_A029 Root control P... 157 5e-038
gb|CF667935.1|CF667935 RTCNT1_33_A02.g1_A029 Root control P... 157 5e-038
gb|DR092715.1|DR092715 STRR1_3_G12.b1_A033 Stem Response Re... 157 5e-038
gb|DR093440.1|DR093440 STRR1_8_G01.b1_A033 Stem Response Re... 157 5e-038
gb|DR093528.1|DR093528 STRR1_8_G01.g1_A033 Stem Response Re... 157 5e-038
gb|DR093538.1|DR093538 STRR1_8_H01.g1_A033 Stem Response Re... 157 5e-038
gb|CF402148.1|CF402148 RTWW1_20_B09.g1_A015 Well-watered lo... 151 3e-036
gb|BX784158.1|BX784158 BX784158 Pinus pinaster differenciat... 149 1e-035
gb|CF387653.1|CF387653 RTDR1_19_D01.b1_A015 Loblolly pine r... 145 2e-034
gb|DR078693.1|DR078693 RTFEPL1_6_F09.b1_A029 Roots plus add... 145 2e-034
gb|DR014989.1|DR014989 HEAT1_52_G06.g1_A029 Root at 37 C fo... 91 5e-034
gb|CF672122.1|CF672122 RTCNT1_61_B08.g1_A029 Root control P... 130 4e-033
gb|CF672984.1|CF672984 RTCNT1_75_F06.b1_A029 Root control P... 140 8e-033
gb|CF673059.1|CF673059 RTCNT1_75_F06.g1_A029 Root control P... 140 8e-033
gb|CO409263.1|CO409263 EST839648 Sequencing ESTs from loblo... 140 8e-033
gb|DT625597.1|DT625597 EST1157521 Sequencing ESTs from lobl... 140 8e-033
gb|DR180240.1|DR180240 RTMNUT1_27_G10.b1_A029 Roots minus m... 139 2e-032
gb|DR386257.1|DR386257 RTHG1_14_A02.b1_A029 Roots plus adde... 139 2e-032
gb|DR387368.1|DR387368 RTHG1_21_F12.b1_A029 Roots plus adde... 139 2e-032
gb|DR010989.1|DR010989 HEAT1_2_D01.g1_A029 Root at 37 C for... 138 3e-032
gb|CF671978.1|CF671978 RTCNT1_60_B07.g1_A029 Root control P... 137 7e-032
gb|CO174545.1|CO174545 NDL1_44_D12.g1_A029 Needles control ... 137 7e-032
gb|CF390685.1|CF390685 RTDR2_20_D05.g1_A021 Loblolly pine r... 136 1e-031
gb|CF394868.1|CF394868 RTDS2_8_H11.b1_A021 Drought-stressed... 136 1e-031
gb|CF394958.1|CF394958 RTDS2_8_H11.g1_A021 Drought-stressed... 136 1e-031
gb|CV033413.1|CV033413 RTNACL1_34_H08.b1_A029 Roots plus ad... 136 1e-031
gb|CV033500.1|CV033500 RTNACL1_34_H08.g1_A029 Roots plus ad... 136 1e-031
gb|CV036239.1|CV036239 RTNACL1_57_E12.g1_A029 Roots plus ad... 136 1e-031
gb|CV135378.1|CV135378 EST846587 Sequencing ESTs from loblo... 136 1e-031
gb|CX650345.1|CX650345 COLD1_45_C03.b1_A029 Root cold Pinus... 136 1e-031
gb|CX650419.1|CX650419 COLD1_45_C03.g1_A029 Root cold Pinus... 136 1e-031
gb|DN460749.1|DN460749 EST956548 Sequencing ESTs from loblo... 136 1e-031
gb|DR013036.1|DR013036 HEAT1_16_C09.g1_A029 Root at 37 C fo... 136 1e-031
gb|DR050330.1|DR050330 RTBOR1_22_F04.g1_A029 Roots plus add... 136 1e-031
gb|DR057043.1|DR057043 RTNIT1_2_E01.b1_A029 Roots minus nit... 136 1e-031
gb|DR092404.1|DR092404 STRR1_1_E06.b1_A033 Stem Response Re... 136 1e-031
gb|DR092490.1|DR092490 STRR1_1_E06.g1_A033 Stem Response Re... 136 1e-031
gb|DR160246.1|DR160246 RTFE1_4_H05.g1_A029 Roots minus iron... 136 1e-031
gb|DR167219.1|DR167219 RTPHOS1_17_A07.g1_A029 Roots minus p... 136 1e-031
gb|DR384758.1|DR384758 RTHG1_4_H10.b1_A029 Roots plus added... 136 1e-031
gb|DR384838.1|DR384838 RTHG1_4_H10.g1_A029 Roots plus added... 136 1e-031
gb|DR744591.1|DR744591 RTCU1_23_B10.g1_A029 Roots plus adde... 136 1e-031
gb|DT625952.1|DT625952 EST1157876 Sequencing ESTs from lobl... 136 1e-031
gb|DT626855.1|DT626855 EST1159931 Sequencing ESTs from lobl... 136 1e-031
gb|CF393317.1|CF393317 RTDR3_20_D09.g1_A022 Loblolly pine r... 73 1e-031
gb|CF386135.1|CF386135 RTDR1_8_E10.g1_A015 Loblolly pine ro... 136 1e-031
gb|CF387703.1|CF387703 RTDR1_19_C11.g1_A015 Loblolly pine r... 136 1e-031
gb|DR025160.1|DR025160 STRS1_70_A08.b1_A034 Shoot tip pitch... 135 2e-031
gb|DR025238.1|DR025238 STRS1_70_A08.g1_A034 Shoot tip pitch... 135 2e-031
gb|DR061097.1|DR061097 RTNIT1_32_C01.b1_A029 Roots minus ni... 135 2e-031
gb|CF391187.1|CF391187 RTDR3_4_G12.b1_A022 Loblolly pine ro... 135 3e-031
gb|CF391927.1|CF391927 RTDR3_10_D12.g1_A022 Loblolly pine r... 135 3e-031
gb|CF475538.1|CF475538 RTWW2_12_G10.g1_A021 Well-watered lo... 134 4e-031
gb|CO169714.1|CO169714 NDL1_9_C07.b1_A029 Needles control P... 134 4e-031
gb|CF477023.1|CF477023 RTWW3_5_H04.b1_A022 Well-watered lob... 133 7e-031
gb|DR018310.1|DR018310 STRS1_22_B04.b1_A034 Shoot tip pitch... 133 1e-030
gb|DR055649.1|DR055649 RTCA1_25_B07.b1_A029 Roots minus cal... 132 2e-030
gb|DR055722.1|DR055722 RTCA1_25_B07.g1_A029 Roots minus cal... 132 2e-030
gb|DR081343.1|DR081343 RTFEPL1_29_B02.b1_A029 Roots plus ad... 132 2e-030
gb|CF400021.1|CF400021 RTWW1_2_F02.g1_A015 Well-watered lob... 132 2e-030
gb|DR080492.1|DR080492 RTFEPL1_23_C05.b1_A029 Roots plus ad... 132 2e-030
gb|CX651079.1|CX651079 COLD1_50_B01.b1_A029 Root cold Pinus... 79 3e-030
gb|DR058570.1|DR058570 RTNIT1_12_D05.g1_A029 Roots minus ni... 131 3e-030
gb|DR057693.1|DR057693 RTNIT1_7_F09.b1_A029 Roots minus nit... 79 6e-030
gb|DR071932.1|DR071932 RTDK1_23_B01.b1_A029 Roots, dark Pin... 79 6e-030
gb|DR060345.1|DR060345 RTNIT1_27_F06.b1_A029 Roots minus ni... 79 6e-030
gb|CF671705.1|CF671705 RTCNT1_58_F05.g1_A029 Root control P... 79 6e-030
gb|DR167797.1|DR167797 RTPHOS1_21_D07.b1_A029 Roots minus p... 79 6e-030
gb|CF388973.1|CF388973 RTDR2_16_D05.g1_A021 Loblolly pine r... 129 1e-029
gb|AW056850.1|AW056850 ST57B04 Pine TriplEx shoot tip libra... 129 2e-029
gb|DR092771.1|DR092771 STRR1_3_G12.g1_A033 Stem Response Re... 128 3e-029
gb|DR054821.1|DR054821 RTCA1_19_F07.g1_A029 Roots minus cal... 81 5e-029
gb|DR388754.1|DR388754 RTHG1_30_F11.b1_A029 Roots plus adde... 81 5e-029
gb|DR096014.1|DR096014 STRR1_25_E02.b1_A033 Stem Response R... 81 5e-029
gb|CX652892.1|CX652892 COLD1_62_D09.b1_A029 Root cold Pinus... 84 7e-029
gb|DR011089.1|DR011089 HEAT1_3_H03.b1_A029 Root at 37 C for... 79 7e-029
gb|CO201161.1|CO201161 RTCNT2_4_B05.b1_A029 Root control 2 ... 79 7e-029
gb|DR112756.1|DR112756 RTS1_30_H04.b1_A029 Roots minus sulf... 80 1e-028
gb|CV134497.1|CV134497 EST845706 Sequencing ESTs from loblo... 126 2e-028
gb|CO366390.1|CO366390 RTK1_27_C09.g1_A029 Roots minus pota... 79 2e-028
gb|CF670095.1|CF670095 RTCNT1_48_C02.b1_A029 Root control P... 125 3e-028
gb|DN448211.1|DN448211 EST944010 Sequencing ESTs from loblo... 125 3e-028
gb|CO363027.1|CO363027 RTK1_7_E06.b1_A029 Roots minus potas... 79 3e-028
gb|CF667376.1|CF667376 RTCNT1_29_G09.g1_A029 Root control P... 79 3e-028
gb|DR387487.1|DR387487 RTHG1_22_D03.b1_A029 Roots plus adde... 79 3e-028
gb|DR023807.1|DR023807 STRS1_60_E04.b1_A034 Shoot tip pitch... 79 3e-028
gb|CO197738.1|CO197738 GEO1_8_E11.g1_A029 Root gravitropism... 79 3e-028
gb|DT624341.1|DT624341 EST1158616 Sequencing ESTs from lobl... 124 5e-028
gb|CO364701.1|CO364701 RTK1_21_F12.b1_A029 Roots minus pota... 81 6e-028
emb|AJ309081.1|PPI309081 Pinus pinaster partial mRNA for pu... 101 6e-028
gb|CO200190.1|CO200190 GEO2_6_A07.b1_A032 Root gravitropism... 80 9e-028
gb|CF664646.1|CF664646 RTCNT1_11_D06.b1_A029 Root control P... 115 9e-028
gb|DR178348.1|DR178348 RTMNUT1_11_E04.b1_A029 Roots minus m... 78 1e-027
gb|CF402097.1|CF402097 RTWW1_20_B09.b1_A015 Well-watered lo... 122 3e-027
gb|CF401877.1|CF401877 RTWW1_15_F04.g1_A015 Well-watered lo... 121 4e-027
gb|DR095249.1|DR095249 STRR1_19_F08.g1_A033 Stem Response R... 76 6e-027
gb|CO369661.1|CO369661 RTK1_48_D04.g1_A029 Roots minus pota... 68 6e-027
gb|AH014262.1|SEG_AY764553S Pinus taeda isolate 30 coumarat... 101 8e-027
gb|AH014263.1|SEG_AY764555S Pinus taeda isolate 14 coumarat... 101 8e-027
gb|AH014264.1|SEG_AY764557S Pinus taeda isolate 3 coumarate... 101 8e-027
gb|AH014265.1|SEG_AY764559S Pinus taeda isolate 12 coumarat... 101 8e-027
gb|AH014266.1|SEG_AY764561S Pinus taeda isolate 18 coumarat... 101 8e-027
gb|AH014267.1|SEG_AY764563S Pinus taeda isolate 21 coumarat... 101 8e-027
gb|AH014268.1|SEG_AY764565S Pinus taeda isolate 8 coumarate... 101 8e-027
gb|AH014269.1|SEG_AY764567S Pinus taeda isolate 27 coumarat... 101 8e-027
gb|AH014270.1|SEG_AY764569S Pinus taeda isolate 25 coumarat... 101 8e-027
gb|AH014271.1|SEG_AY764571S Pinus taeda isolate 22 coumarat... 101 8e-027
gb|AH014272.1|SEG_AY764573S Pinus taeda isolate 9 coumarate... 101 8e-027
gb|AH014273.1|SEG_AY764575S Pinus taeda isolate 6 coumarate... 101 8e-027
gb|AH014274.1|SEG_AY764577S Pinus taeda isolate 10 coumarat... 101 8e-027
gb|AH014275.1|SEG_AY764579S Pinus taeda isolate 11 coumarat... 101 8e-027
gb|AH014276.1|SEG_AY764581S Pinus taeda isolate 26 coumarat... 101 8e-027
gb|AH014277.1|SEG_AY764583S Pinus taeda isolate 4 coumarate... 101 8e-027
gb|AH014278.1|SEG_AY764585S Pinus taeda isolate 16 coumarat... 101 8e-027
gb|AH014279.1|SEG_AY764587S Pinus taeda isolate 20 coumarat... 101 8e-027
gb|AH014280.1|SEG_AY764589S Pinus taeda isolate 2 coumarate... 101 8e-027
gb|AH014281.1|SEG_AY764591S Pinus taeda isolate 7 coumarate... 101 8e-027
gb|AH014282.1|SEG_AY764593S Pinus taeda isolate 19 coumarat... 101 8e-027
gb|AH014283.1|SEG_AY764595S Pinus taeda isolate 32 coumarat... 101 8e-027
gb|AH014284.1|SEG_AY764597S Pinus taeda isolate 15 coumarat... 101 8e-027
gb|AH014285.1|SEG_AY764599S Pinus taeda isolate 17 coumarat... 101 8e-027
gb|AH014286.1|SEG_AY764601S Pinus taeda isolate 31 coumarat... 101 8e-027
gb|AH014287.1|SEG_AY764603S Pinus taeda isolate 28 coumarat... 101 8e-027
gb|AH014288.1|SEG_AY764605S Pinus taeda isolate 1 coumarate... 101 8e-027
gb|AH014289.1|SEG_AY764607S Pinus taeda isolate 24 coumarat... 101 8e-027
gb|AY064170.1| Pinus taeda p-coumarate 3-hydroxylase mRNA, ... 101 8e-027
gb|AY764586.1|AY764585S2 Pinus taeda isolate 16 coumarate 3... 101 8e-027
gb|AY764554.1|AY764553S2 Pinus taeda isolate 30 coumarate 3... 101 8e-027
gb|AY764556.1|AY764555S2 Pinus taeda isolate 14 coumarate 3... 101 8e-027
gb|AY764558.1|AY764557S2 Pinus taeda isolate 3 coumarate 3-... 101 8e-027
gb|AY764560.1|AY764559S2 Pinus taeda isolate 12 coumarate 3... 101 8e-027
gb|AY764562.1|AY764561S2 Pinus taeda isolate 18 coumarate 3... 101 8e-027
gb|AY764564.1|AY764563S2 Pinus taeda isolate 21 coumarate 3... 101 8e-027
gb|AY764566.1|AY764565S2 Pinus taeda isolate 8 coumarate 3-... 101 8e-027
gb|AY764568.1|AY764567S2 Pinus taeda isolate 27 coumarate 3... 101 8e-027
gb|AY764570.1|AY764569S2 Pinus taeda isolate 25 coumarate 3... 101 8e-027
gb|AY764572.1|AY764571S2 Pinus taeda isolate 22 coumarate 3... 101 8e-027
gb|AY764574.1|AY764573S2 Pinus taeda isolate 9 coumarate 3-... 101 8e-027
gb|AY764576.1|AY764575S2 Pinus taeda isolate 6 coumarate 3-... 101 8e-027
gb|AY764578.1|AY764577S2 Pinus taeda isolate 10 coumarate 3... 101 8e-027
gb|AY764580.1|AY764579S2 Pinus taeda isolate 11 coumarate 3... 101 8e-027
gb|AY764582.1|AY764581S2 Pinus taeda isolate 26 coumarate 3... 101 8e-027
gb|AY764584.1|AY764583S2 Pinus taeda isolate 4 coumarate 3-... 101 8e-027
gb|AY764588.1|AY764587S2 Pinus taeda isolate 20 coumarate 3... 101 8e-027
gb|AY764590.1|AY764589S2 Pinus taeda isolate 2 coumarate 3-... 101 8e-027
gb|AY764592.1|AY764591S2 Pinus taeda isolate 7 coumarate 3-... 101 8e-027
gb|AY764594.1|AY764593S2 Pinus taeda isolate 19 coumarate 3... 101 8e-027
gb|AY764596.1|AY764595S2 Pinus taeda isolate 32 coumarate 3... 101 8e-027
gb|AY764598.1|AY764597S2 Pinus taeda isolate 15 coumarate 3... 101 8e-027
gb|AY764600.1|AY764599S2 Pinus taeda isolate 17 coumarate 3... 101 8e-027
gb|AY764602.1|AY764601S2 Pinus taeda isolate 31 coumarate 3... 101 8e-027
gb|AY764604.1|AY764603S2 Pinus taeda isolate 28 coumarate 3... 101 8e-027
gb|AY764606.1|AY764605S2 Pinus taeda isolate 1 coumarate 3-... 101 8e-027
gb|AY764608.1|AY764607S2 Pinus taeda isolate 24 coumarate 3... 101 8e-027
gb|CO165284.1|CO165284 FLD1_53_C02.g1_A029 Root flooded Pin... 101 8e-027
gb|DR021239.1|DR021239 STRS1_43_G03.b1_A034 Shoot tip pitch... 101 8e-027
gb|CO165209.1|CO165209 FLD1_53_C02.b1_A029 Root flooded Pin... 101 8e-027
gb|DR051877.1|DR051877 RTCA1_1_B05.b1_A029 Roots minus calc... 101 8e-027
gb|DR020357.1|DR020357 STRS1_36_H11.b1_A034 Shoot tip pitch... 101 8e-027
gb|CO367116.1|CO367116 RTK1_32_F12.b1_A029 Roots minus pota... 101 8e-027
gb|DR683159.1|DR683159 EST1073235 Normalized pine embryo li... 101 8e-027
gb|CO367196.1|CO367196 RTK1_32_F12.g1_A029 Roots minus pota... 101 8e-027
gb|DR020783.1|DR020783 STRS1_39_F10.b1_A034 Shoot tip pitch... 101 8e-027
gb|CO362627.1|CO362627 RTK1_4_F08.g1_A029 Roots minus potas... 101 8e-027
gb|BX251037.1|BX251037 BX251037 Pinus pinaster differenciat... 101 8e-027
gb|DR020429.1|DR020429 STRS1_36_H11.g1_A034 Shoot tip pitch... 101 8e-027
gb|CF668250.1|CF668250 RTCNT1_35_G09.b1_A029 Root control P... 101 8e-027
gb|DR049536.1|DR049536 RTBOR1_17_G08.b1_A029 Roots plus add... 101 8e-027
gb|DR178817.1|DR178817 RTMNUT1_14_E03.b1_A029 Roots minus m... 81 8e-027
gb|DR178900.1|DR178900 RTMNUT1_14_E03.g1_A029 Roots minus m... 81 8e-027
gb|CF387452.1|CF387452 RTDR1_20_E06.b1_A015 Loblolly pine r... 101 1e-026
gb|CF399940.1|CF399940 RTWW1_2_F02.b1_A015 Well-watered lob... 119 2e-026
gb|DR012987.1|DR012987 HEAT1_16_G02.b1_A029 Root at 37 C fo... 119 2e-026
gb|CX648229.1|CX648229 COLD1_27_G12.b1_A029 Root cold Pinus... 103 2e-026
gb|CO172737.1|CO172737 NDL1_31_C06.g1_A029 Needles control ... 103 2e-026
gb|DR070752.1|DR070752 RTDK1_15_H03.b1_A029 Roots, dark Pin... 103 2e-026
gb|CO174050.1|CO174050 NDL1_41_H10.b1_A029 Needles control ... 103 2e-026
gb|CX648961.1|CX648961 COLD1_32_B12.b1_A029 Root cold Pinus... 103 2e-026
gb|DR054235.1|DR054235 RTCA1_16_C02.b1_A029 Roots minus cal... 103 2e-026
gb|DR070829.1|DR070829 RTDK1_15_H03.g1_A029 Roots, dark Pin... 103 2e-026
gb|CF663159.1|CF663159 RTCNT1_1_D07.b1_A029 Root control Pi... 103 2e-026
gb|DR745282.1|DR745282 RTCU1_28_F12.b1_A029 Roots plus adde... 103 2e-026
gb|CO172329.1|CO172329 NDL1_29_B08.b1_A029 Needles control ... 103 2e-026
gb|CF665533.1|CF665533 RTCNT1_16_C12.g1_A029 Root control P... 103 2e-026
gb|DR018207.1|DR018207 STRS1_21_D10.b1_A034 Shoot tip pitch... 103 2e-026
gb|CO168908.1|CO168908 NDL1_3_H10.b1_A029 Needles control P... 104 2e-026
gb|CO174785.1|CO174785 NDL1_46_F08.b1_A029 Needles control ... 104 2e-026
gb|CF392494.1|CF392494 RTDR3_6_A11.b1_A022 Loblolly pine ro... 103 2e-026
gb|DR068849.1|DR068849 RTDK1_3_F08.b1_A029 Roots, dark Pinu... 103 2e-026
gb|DR052240.1|DR052240 RTCA1_3_G07.b1_A029 Roots minus calc... 69 3e-026
gb|DR052314.1|DR052314 RTCA1_3_G07.g1_A029 Roots minus calc... 69 3e-026
gb|CF673013.1|CF673013 RTCNT1_75_A10.g1_A029 Root control P... 118 3e-026
gb|CV036172.1|CV036172 RTNACL1_57_E12.b1_A029 Roots plus ad... 118 3e-026
gb|CO200490.1|CO200490 GEO2_7_F10.g1_A032 Root gravitropism... 102 4e-026
gb|CO174468.1|CO174468 NDL1_44_E05.b1_A029 Needles control ... 102 4e-026
gb|CF386061.1|CF386061 RTDR1_8_D11.b1_A015 Loblolly pine ro... 102 4e-026
gb|CF400183.1|CF400183 RTWW1_3_G10.g1_A015 Well-watered lob... 102 4e-026
gb|CF472528.1|CF472528 RTDS1_10_F12.b1_A015 Drought-stresse... 102 4e-026
gb|DR097975.1|DR097975 STRR1_38_G01.b1_A033 Stem Response R... 102 4e-026
gb|CF387701.1|CF387701 RTDR1_19_D06.g1_A015 Loblolly pine r... 102 4e-026
gb|CF386988.1|CF386988 RTDR1_10_G08.b1_A015 Loblolly pine r... 102 4e-026
gb|CF475411.1|CF475411 RTWW2_13_H03.g1_A021 Well-watered lo... 102 4e-026
gb|CF475076.1|CF475076 RTWW2_5_H06.g1_A021 Well-watered lob... 102 4e-026
gb|CF671186.1|CF671186 RTCNT1_55_G12.b1_A029 Root control P... 69 4e-026
gb|CF400218.1|CF400218 RTWW1_4_C08.b1_A015 Well-watered lob... 102 4e-026
gb|CF385478.1|CF385478 RTDR1_4_A12.b1_A015 Loblolly pine ro... 102 4e-026
gb|DR102363.1|DR102363 STRR1_80_C06.g1_A033 Stem Response R... 101 4e-026
gb|CV033215.1|CV033215 RTNACL1_33_C10.b1_A029 Roots plus ad... 67 5e-026
gb|DR071095.1|DR071095 RTDK1_17_C10.g1_A029 Roots, dark Pin... 68 8e-026
gb|DR025052.1|DR025052 STRS1_69_G01.b1_A034 Shoot tip pitch... 104 1e-025
gb|DR095294.1|DR095294 STRR1_20_D03.b1_A033 Stem Response R... 104 1e-025
gb|DR101460.1|DR101460 STRR1_73_F06.b1_A033 Stem Response R... 104 1e-025
gb|CO361705.1|CO361705 NDL2_6_B10.g1_A029 Needles control 2... 104 1e-025
gb|DR097478.1|DR097478 STRR1_34_H04.g3_A033 Stem Response R... 104 1e-025
gb|DR385802.1|DR385802 RTHG1_11_A09.b1_A029 Roots plus adde... 104 1e-025
gb|CO168990.1|CO168990 NDL1_3_H10.g1_A029 Needles control P... 104 1e-025
gb|DR097817.1|DR097817 STRR1_37_E11.b1_A033 Stem Response R... 104 1e-025
gb|CF400732.1|CF400732 RTWW1_7_F09.g1_A015 Well-watered lob... 104 1e-025
gb|CF401174.1|CF401174 RTWW1_10_G11.g1_A015 Well-watered lo... 104 1e-025
gb|CF401062.1|CF401062 RTWW1_9_D04.g1_A015 Well-watered lob... 104 1e-025
gb|CF387731.1|CF387731 RTDR1_19_E03.g1_A015 Loblolly pine r... 104 1e-025
gb|CF664833.1|CF664833 RTCNT1_12_E12.b1_A029 Root control P... 104 1e-025
gb|DR098494.1|DR098494 STRR1_45_H01.g1_A033 Stem Response R... 104 1e-025
gb|DR098417.1|DR098417 STRR1_45_H01.b1_A033 Stem Response R... 104 1e-025
gb|DR118697.1|DR118697 RTMG1_18_D07.g1_A029 Roots minus mag... 104 1e-025
gb|CF386671.1|CF386671 RTDR1_16_G09.b1_A015 Loblolly pine r... 104 1e-025
gb|CO169454.1|CO169454 NDL1_7_E03.b1_A029 Needles control P... 104 1e-025
gb|CF400956.1|CF400956 RTWW1_9_D04.b1_A015 Well-watered lob... 104 1e-025
gb|CO364319.1|CO364319 RTK1_15_B05.b1_A029 Roots minus pota... 104 1e-025
gb|CO364401.1|CO364401 RTK1_15_B05.g1_A029 Roots minus pota... 104 1e-025
gb|CO169355.1|CO169355 NDL1_6_B06.g1_A029 Needles control P... 102 1e-025
gb|DR069451.1|DR069451 RTDK1_7_H01.b1_A029 Roots, dark Pinu... 102 1e-025
gb|CF389336.1|CF389336 RTDR2_7_F07.b1_A021 Loblolly pine ro... 102 1e-025
gb|CF391339.1|CF391339 RTDR3_1_C03.b1_A022 Loblolly pine ro... 79 2e-025
gb|DR070550.1|DR070550 RTDK1_14_B09.b1_A029 Roots, dark Pin... 101 3e-025
gb|DR070616.1|DR070616 RTDK1_14_B09.g1_A029 Roots, dark Pin... 101 3e-025
gb|CO168738.1|CO168738 NDL1_2_E05.b1_A029 Needles control P... 69 3e-025
gb|CF664373.1|CF664373 RTCNT1_9_H07.b1_A029 Root control Pi... 67 4e-025
gb|DR163418.1|DR163418 RTFE1_42_G03.g1_A029 Roots minus iro... 96 5e-025
gb|DR100593.1|DR100593 STRR1_65_G06.b1_A033 Stem Response R... 113 8e-025
gb|CO197246.1|CO197246 GEO1_4_H06.g1_A029 Root gravitropism... 75 9e-025
gb|CX715775.1|CX715775 RTPQ1_36_A08.g1_A032 Roots treated w... 113 1e-024
gb|CO361634.1|CO361634 NDL2_6_B10.b1_A029 Needles control 2... 104 1e-024
gb|CO364543.1|CO364543 RTK1_16_G09.b1_A029 Roots minus pota... 77 2e-024
gb|CF665452.1|CF665452 RTCNT1_16_C12.b1_A029 Root control P... 97 2e-024
gb|DR387552.1|DR387552 RTHG1_22_D03.g2_A029 Roots plus adde... 79 3e-024
gb|CF474293.1|CF474293 RTWW2_20_F09.b1_A021 Well-watered lo... 61 3e-024
gb|CV033140.1|CV033140 RTNACL1_20_D03.g1_A029 Roots plus ad... 67 1e-023
gb|DN631023.1|DN631023 EST981839 Subtracted pine embryo lib... 94 1e-023
gb|CF396649.1|CF396649 RTDS2_23_G09.b1_A021 Drought-stresse... 109 1e-023
gb|DR020400.1|DR020400 STRS1_36_E04.g1_A034 Shoot tip pitch... 66 1e-023
gb|DR742401.1|DR742401 RTCU1_3_F08.g2_A029 Roots plus added... 69 3e-023
gb|CF402117.1|CF402117 RTWW1_20_E05.b1_A015 Well-watered lo... 93 3e-023
gb|CO198262.1|CO198262 GEO1_12_A07.g1_A029 Root gravitropis... 89 5e-023
gb|CO164768.1|CO164768 FLD1_50_E03.b1_A029 Root flooded Pin... 89 5e-023
gb|CX714791.1|CX714791 RTPQ1_27_A05.b1_A032 Roots treated w... 67 7e-023
gb|CO164846.1|CO164846 FLD1_50_E03.g1_A029 Root flooded Pin... 101 9e-023
gb|CF671620.1|CF671620 RTCNT1_58_F05.b1_A029 Root control P... 72 9e-023
gb|DR165380.1|DR165380 RTPHOS1_4_D09.g1_A029 Roots minus ph... 69 2e-022
gb|DR165315.1|DR165315 RTPHOS1_4_D09.b1_A029 Roots minus ph... 69 2e-022
gb|CF396771.1|CF396771 RTDS2_24_H10.b1_A021 Drought-stresse... 89 3e-022
gb|CO369373.1|CO369373 RTK1_46_E04.g1_A029 Roots minus pota... 55 4e-022
gb|CO169531.1|CO169531 NDL1_7_E03.g1_A029 Needles control P... 104 5e-022
gb|CO174864.1|CO174864 NDL1_46_F08.g1_A029 Needles control ... 104 5e-022
gb|CV031482.1|CV031482 RTNACL1_1_G10.g1_A029 Roots plus add... 104 5e-022
gb|CV033403.1|CV033403 RTNACL1_34_G06.b1_A029 Roots plus ad... 104 5e-022
gb|DR097889.1|DR097889 STRR1_37_E11.g1_A033 Stem Response R... 104 5e-022
gb|CF478341.1|CF478341 RTWW3_18_D10.g1_A022 Well-watered lo... 79 6e-022
gb|CF478418.1|CF478418 RTWW3_20_D10.b1_A022 Well-watered lo... 92 6e-022
gb|CO163057.1|CO163057 FLD1_39_E06.b1_A029 Root flooded Pin... 85 8e-022
gb|CF389444.1|CF389444 RTDR2_7_F07.g1_A021 Loblolly pine ro... 103 1e-021
gb|CO172721.1|CO172721 NDL1_31_B02.g1_A029 Needles control ... 103 1e-021
gb|CO174135.1|CO174135 NDL1_41_H10.g1_A029 Needles control ... 103 1e-021
gb|DR068937.1|DR068937 RTDK1_3_F08.g1_A029 Roots, dark Pinu... 103 1e-021
gb|CF402134.1|CF402134 RTWW1_20_E05.g1_A015 Well-watered lo... 102 2e-021
gb|DR167142.1|DR167142 RTPHOS1_17_A07.b1_A029 Roots minus p... 102 2e-021
gb|DR744506.1|DR744506 RTCU1_22_H11.g1_A029 Roots plus adde... 101 3e-021
gb|CF385785.1|CF385785 RTDR1_6_F10.b1_A015 Loblolly pine ro... 87 4e-021
gb|CO200805.1|CO200805 RTCNT2_1_E03.g1_A029 Root control 2 ... 101 4e-021
gb|CF397949.1|CF397949 RTDS3_23_A09.g1_A022 Drought-stresse... 63 5e-021
gb|DR071240.1|DR071240 RTDK1_18_C09.g1_A029 Roots, dark Pin... 68 7e-021
gb|CO198705.1|CO198705 GEO1_15_H05.g1_A029 Root gravitropis... 72 8e-021
gb|CO166660.1|CO166660 FLD1_63_C11.g1_A029 Root flooded Pin... 82 8e-021
gb|DR053787.1|DR053787 RTCA1_13_H01.b1_A029 Roots minus cal... 84 8e-021
gb|CF667480.1|CF667480 RTCNT1_30_C05.g1_A029 Root control P... 100 8e-021
gb|DR091012.1|DR091012 RTAL1_18_G08.g1_A029 Roots plus adde... 100 8e-021
gb|DR743154.1|DR743154 RTCU1_13_H10.g1_A029 Roots plus adde... 100 8e-021
>gb|CF672051.1|CF672051 RTCNT1_61_B08.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_61_B08_A029 3', mRNA sequence
Length = 760
Score = 158 bits (339), Expect = 3e-038
Identities = 61/125 (48%), Positives = 81/125 (64%)
Frame = -1 / -2
Query: 551 QSACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFG 372
+S+C+V GY +P ++VNAWAIGRDP WDEP KF PERF +S +++G +FE IPFG
Sbjct: 477 ESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERFVESEMEYRGQNFELIPFG 298
Query: 371 AGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVA 192
AGRRICPG+ F+WSLP G+T + +DM+E FGI R S L+ V
Sbjct: 297 AGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSERFGITLQRASPLIAVP 118
Query: 191 TPRVP 177
+ R+P
Sbjct: 117 SLRLP 103
>gb|CF667857.1|CF667857 RTCNT1_33_A02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_33_A02_A029 3', mRNA sequence
Length = 652
Score = 157 bits (338), Expect = 5e-038
Identities = 60/125 (48%), Positives = 81/125 (64%)
Frame = -1 / +2
Query: 551 QSACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFG 372
+S+C+V GY +P ++VNAWAIGRDP WDEP KF PERF +S +++G +FE IPFG
Sbjct: 8 ESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERFVESEMEYRGQNFELIPFG 187
Query: 371 AGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVA 192
AGRRICPG+ F+WSLP G+T + +DM+E FGI R S L+ +
Sbjct: 188 AGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSERFGITLQRASPLIAIP 367
Query: 191 TPRVP 177
+ R+P
Sbjct: 368 SLRLP 382
>gb|CF667935.1|CF667935 RTCNT1_33_A02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_33_A02_A029 5', mRNA sequence
Length = 740
Score = 157 bits (338), Expect = 5e-038
Identities = 60/125 (48%), Positives = 81/125 (64%)
Frame = -1 / +2
Query: 551 QSACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFG 372
+S+C+V GY +P ++VNAWAIGRDP WDEP KF PERF +S +++G +FE IPFG
Sbjct: 320 ESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERFVESEMEYRGQNFELIPFG 499
Query: 371 AGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVA 192
AGRRICPG+ F+WSLP G+T + +DM+E FGI R S L+ +
Sbjct: 500 AGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSERFGITLQRASPLIAIP 679
Query: 191 TPRVP 177
+ R+P
Sbjct: 680 SLRLP 694
>gb|DR092715.1|DR092715 STRR1_3_G12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_3_G12_A033 3', mRNA sequence
Length = 818
Score = 157 bits (338), Expect = 5e-038
Identities = 60/125 (48%), Positives = 81/125 (64%)
Frame = -1 / +2
Query: 551 QSACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFG 372
+S+C+V GY +P ++VNAWAIGRDP WDEP KF PERF +S +++G +FE IPFG
Sbjct: 68 ESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERFVESEMEYRGQNFELIPFG 247
Query: 371 AGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVA 192
AGRRICPG+ F+WSLP G+T + +DM+E FGI R S L+ +
Sbjct: 248 AGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSERFGITLQRASPLIAIP 427
Query: 191 TPRVP 177
+ R+P
Sbjct: 428 SLRLP 442
>gb|DR093440.1|DR093440 STRR1_8_G01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_G01_A033 3', mRNA sequence
Length = 915
Score = 157 bits (338), Expect = 5e-038
Identities = 60/125 (48%), Positives = 81/125 (64%)
Frame = -1 / +1
Query: 551 QSACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFG 372
+S+C+V GY +P ++VNAWAIGRDP WDEP KF PERF +S +++G +FE IPFG
Sbjct: 16 ESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERFVESEMEYRGQNFELIPFG 195
Query: 371 AGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVA 192
AGRRICPG+ F+WSLP G+T + +DM+E FGI R S L+ +
Sbjct: 196 AGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSERFGITLQRASPLIAIP 375
Query: 191 TPRVP 177
+ R+P
Sbjct: 376 SLRLP 390
>gb|DR093528.1|DR093528 STRR1_8_G01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_G01_A033 5', mRNA sequence
Length = 902
Score = 157 bits (338), Expect = 5e-038
Identities = 60/125 (48%), Positives = 81/125 (64%)
Frame = -1 / +3
Query: 551 QSACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFG 372
+S+C+V GY +P ++VNAWAIGRDP WDEP KF PERF +S +++G +FE IPFG
Sbjct: 297 ESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERFVESEMEYRGQNFELIPFG 476
Query: 371 AGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVA 192
AGRRICPG+ F+WSLP G+T + +DM+E FGI R S L+ +
Sbjct: 477 AGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSERFGITLQRASPLIAIP 656
Query: 191 TPRVP 177
+ R+P
Sbjct: 657 SLRLP 671
>gb|DR093538.1|DR093538 STRR1_8_H01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_H01_A033 5', mRNA sequence
Length = 866
Score = 157 bits (338), Expect = 5e-038
Identities = 60/125 (48%), Positives = 81/125 (64%)
Frame = -1 / +2
Query: 551 QSACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFG 372
+S+C+V GY +P ++VNAWAIGRDP WDEP KF PERF +S +++G +FE IPFG
Sbjct: 281 ESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERFVESEMEYRGQNFELIPFG 460
Query: 371 AGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVA 192
AGRRICPG+ F+WSLP G+T + +DM+E FGI R S L+ +
Sbjct: 461 AGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGITTDTMDMSERFGITLQRASPLIAIP 640
Query: 191 TPRVP 177
+ R+P
Sbjct: 641 SLRLP 655
>gb|CF402148.1|CF402148 RTWW1_20_B09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_20_B09_A015 5', mRNA sequence
Length = 795
Score = 151 bits (325), Expect = 3e-036
Identities = 58/122 (47%), Positives = 75/122 (61%)
Frame = -1 / +3
Query: 542 CQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAGR 363
C++ GYD+PA + VN W IGRD W+ P +F PERF+ ST D KG D+E +PFG+GR
Sbjct: 162 CRIAGYDIPANTRLFVNVWTIGRDGKLWENPDEFQPERFKGSTLDVKGRDYELLPFGSGR 341
Query: 362 RICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATPR 183
R+CPG + G F W LP G EELDM E FG++TPR L+ +A PR
Sbjct: 342 RMCPGYSHGLKVVYMALSNLIHGFQWKLPDGQNPEELDMCETFGLSTPRTIPLVAMARPR 521
Query: 182 VP 177
+P
Sbjct: 522 LP 527
>gb|BX784158.1|BX784158 BX784158 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130A02, mRNA sequence
Length = 679
Score = 149 bits (321), Expect = 1e-035
Identities = 58/124 (46%), Positives = 78/124 (62%)
Frame = -1 / +2
Query: 551 QSACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFG 372
+S+C+V GY +P V+VNAWAIGRDP W+EP +F PERF + ++KG +FE IPFG
Sbjct: 134 ESSCEVAGYMIPKSTKVLVNAWAIGRDPTIWNEPFEFKPERFMECDIEYKGQNFELIPFG 313
Query: 371 AGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVA 192
AGRRICPG+ F+WSLP G T ++DMTE FGI + L+ +
Sbjct: 314 AGRRICPGLPLAHRMVHLVTASLLHSFNWSLPDGTTPGDMDMTEKFGITLQKALPLIAIP 493
Query: 191 TPRV 180
+PR+
Sbjct: 494 SPRL 505
>gb|CF387653.1|CF387653 RTDR1_19_D01.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_D01_A015 3', mRNA
sequence
Length = 520
Score = 145 bits (311), Expect = 2e-034
Identities = 55/122 (45%), Positives = 74/122 (60%)
Frame = -1 / +3
Query: 542 CQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAGR 363
C++ GYD+PA + VN W IGRD W+ P +F+PERF ST D KG D+E +PFG+GR
Sbjct: 12 CRIAGYDIPANTRLFVNVWTIGRDGNLWENPNEFMPERFNGSTVDVKGRDYELLPFGSGR 191
Query: 362 RICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATPR 183
R+CPG + G F W P G E+LDM E FG++TP+ L+ +A PR
Sbjct: 192 RMCPGYSLGIKVVHLGLANLIHGFHWCQPDGQNPEDLDMGETFGLSTPKTIPLVAMARPR 371
Query: 182 VP 177
+P
Sbjct: 372 LP 377
>gb|DR078693.1|DR078693 RTFEPL1_6_F09.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_6_F09_A029 3', mRNA sequence
Length = 724
Score = 145 bits (311), Expect = 2e-034
Identities = 55/122 (45%), Positives = 74/122 (60%)
Frame = -1 / +2
Query: 542 CQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAGR 363
C++ GYD+PA + VN W IGRD W+ P +F+PERF ST D KG D+E +PFG+GR
Sbjct: 152 CRIAGYDIPANTRLFVNVWTIGRDGNLWENPDQFMPERFNGSTVDVKGRDYELLPFGSGR 331
Query: 362 RICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATPR 183
R+CPG + G F W P G E+LDM E FG++TP+ L+ +A PR
Sbjct: 332 RMCPGYSLGIKVVHLGLANLIHGFHWCQPDGQNPEDLDMGETFGLSTPKTIPLVAMARPR 511
Query: 182 VP 177
+P
Sbjct: 512 LP 517
>gb|DR014989.1|DR014989 HEAT1_52_G06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_G06_A029 5', mRNA sequence
Length = 889
Score = 91.3 bits (193), Expect(2) = 5e-034
Identities = 37/78 (47%), Positives = 45/78 (57%)
Frame = -1 / +2
Query: 410 DFKGADFEFIPFGAGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFG 231
D +G DF+ IPFG+GRR CPGM G FDW LP G+ +LDM E FG
Sbjct: 170 DVRGQDFQLIPFGSGRRGCPGMQLGMVIVEFLLAQLLHCFDWRLPDGMEGRDLDMNEIFG 349
Query: 230 IATPRRSDLLVVATPRVP 177
+A PR LL + TPR+P
Sbjct: 350 LAIPRAVPLLAIPTPRLP 403
Score = 73.0 bits (153), Expect(2) = 5e-034
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = -1 / +2
Query: 542 CQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQS 417
C V GY++PAG VIVNAWAIGRDP W++ +F PERF +S
Sbjct: 29 CTVCGYEIPAGTRVIVNAWAIGRDPKSWEDAEEFKPERFTES 154
>gb|CF672122.1|CF672122 RTCNT1_61_B08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_61_B08_A029 5', mRNA sequence
Length = 695
Score = 130 bits (279), Expect(2) = 4e-033
Identities = 49/96 (51%), Positives = 63/96 (65%)
Frame = -1 / -2
Query: 551 QSACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFG 372
+S+C+V GY +P ++VNAWAIGRDP WDEP KF PERF +S +++G +FE IPFG
Sbjct: 628 ESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWDEPTKFKPERFVESEMEYRGQNFELIPFG 449
Query: 371 AGRRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLT 264
AGRRICPG+ F+WSLP G+T
Sbjct: 448 AGRRICPGLPLAHRMVHVVTASLLHSFNWSLPDGIT 341
Score = 30.4 bits (60), Expect(2) = 4e-033
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1 / -3
Query: 260 EELDMTEAFGIATPRRSDLLVVATPRVP 177
+ +DM+E FGI R S L+ V + R+P
Sbjct: 336 DTMDMSERFGITLQRASPLIAVPSLRLP 253
>gb|CF672984.1|CF672984 RTCNT1_75_F06.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_F06_A029 3', mRNA sequence
Length = 682
Score = 140 bits (300), Expect = 8e-033
Identities = 54/123 (43%), Positives = 73/123 (59%)
Frame = -1 / +3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GYD+PA + VN W I RD W+ P +F PERF+ S D KG D++ +PFG G
Sbjct: 117 ACKVGGYDIPANTRLHVNVWTIARDSGFWENPDEFRPERFQGSALDVKGRDYQLLPFGTG 296
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+CPG G F W LP G + ++LDM E FG++TP+ L+ +A P
Sbjct: 297 RRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDMGETFGLSTPKTQPLVALARP 476
Query: 185 RVP 177
R+P
Sbjct: 477 RLP 485
>gb|CF673059.1|CF673059 RTCNT1_75_F06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_F06_A029 5', mRNA sequence
Length = 722
Score = 140 bits (300), Expect = 8e-033
Identities = 54/123 (43%), Positives = 73/123 (59%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GYD+PA + VN W I RD W+ P +F PERF+ S D KG D++ +PFG G
Sbjct: 293 ACKVGGYDIPANTRLHVNVWTIARDSGFWENPDEFRPERFQGSALDVKGRDYQLLPFGTG 472
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+CPG G F W LP G + ++LDM E FG++TP+ L+ +A P
Sbjct: 473 RRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDMGETFGLSTPKTQPLVALARP 652
Query: 185 RVP 177
R+P
Sbjct: 653 RLP 661
>gb|CO409263.1|CO409263 EST839648 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKN53 5' end, mRNA sequence
Length = 915
Score = 140 bits (300), Expect = 8e-033
Identities = 54/123 (43%), Positives = 73/123 (59%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GYD+PA + VN W I RD W+ P +F PERF+ S D KG D++ +PFG G
Sbjct: 350 ACKVGGYDIPANTRLHVNVWTIARDSGFWENPDEFRPERFQGSALDVKGRDYQLLPFGTG 529
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+CPG G F W LP G + ++LDM E FG++TP+ L+ +A P
Sbjct: 530 RRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDMGETFGLSTPKTQPLVAMARP 709
Query: 185 RVP 177
R+P
Sbjct: 710 RLP 718
>gb|DT625597.1|DT625597 EST1157521 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA166 5' end, mRNA sequence
Length = 906
Score = 140 bits (300), Expect = 8e-033
Identities = 54/123 (43%), Positives = 73/123 (59%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GYD+PA + VN W I RD W+ P +F PERF+ S D KG D++ +PFG G
Sbjct: 350 ACKVGGYDIPANTRLHVNVWTIARDSGFWENPDEFRPERFQGSALDVKGRDYQLLPFGTG 529
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+CPG G F W LP G + ++LDM E FG++TP+ L+ +A P
Sbjct: 530 RRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQSPKDLDMGETFGLSTPKTQPLVAMARP 709
Query: 185 RVP 177
R+P
Sbjct: 710 RLP 718
>gb|DR180240.1|DR180240 RTMNUT1_27_G10.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_27_G10_A029 3', mRNA sequence
Length = 819
Score = 139 bits (298), Expect = 2e-032
Identities = 53/122 (43%), Positives = 73/122 (59%)
Frame = -1 / +1
Query: 542 CQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAGR 363
C++ GYD+PA + VN W I D W++P +F PERFE S D KG D+E +PFG GR
Sbjct: 115 CKIAGYDIPANTRLYVNVWTIAHDAGFWEKPEEFRPERFEGSPLDVKGRDYELLPFGTGR 294
Query: 362 RICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATPR 183
R+CPG + G F W LP G + ++LDM E FG++TP+ L+ +A PR
Sbjct: 295 RMCPGYSLGLKVVHLGLANLIHGFHWWLPDGQSPKDLDMGETFGLSTPKTHPLVAMAGPR 474
Query: 182 VP 177
+P
Sbjct: 475 LP 480
>gb|DR386257.1|DR386257 RTHG1_14_A02.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_14_A02_A029 3', mRNA sequence
Length = 809
Score = 139 bits (298), Expect = 2e-032
Identities = 53/122 (43%), Positives = 73/122 (59%)
Frame = -1 / +2
Query: 542 CQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAGR 363
C++ GYD+PA + VN W I D W++P +F PERFE S D KG D+E +PFG GR
Sbjct: 89 CKIAGYDIPANTRLYVNVWTIAHDAGFWEKPEEFRPERFEGSPLDVKGRDYELLPFGTGR 268
Query: 362 RICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATPR 183
R+CPG + G F W LP G + ++LDM E FG++TP+ L+ +A PR
Sbjct: 269 RMCPGYSLGLKVVHLGLANLIHGFHWWLPDGQSPKDLDMGETFGLSTPKTHPLVAMAGPR 448
Query: 182 VP 177
+P
Sbjct: 449 LP 454
>gb|DR387368.1|DR387368 RTHG1_21_F12.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_21_F12_A029 3', mRNA sequence
Length = 716
Score = 139 bits (298), Expect = 2e-032
Identities = 53/122 (43%), Positives = 73/122 (59%)
Frame = -1 / +2
Query: 542 CQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAGR 363
C++ GYD+PA + VN W I D W++P +F PERFE S D KG D+E +PFG GR
Sbjct: 200 CKIAGYDIPANTRLYVNVWTIAHDAGFWEKPEEFRPERFEGSPLDVKGRDYELLPFGTGR 379
Query: 362 RICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATPR 183
R+CPG + G F W LP G + ++LDM E FG++TP+ L+ +A PR
Sbjct: 380 RMCPGYSLGLKVVHLGLANLIHGFHWWLPDGQSPKDLDMGETFGLSTPKTHPLVAMAGPR 559
Query: 182 VP 177
+P
Sbjct: 560 LP 565
>gb|DR010989.1|DR010989 HEAT1_2_D01.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_2_D01_A029 5', mRNA sequence
Length = 599
Score = 138 bits (296), Expect = 3e-032
Identities = 55/122 (45%), Positives = 72/122 (59%)
Frame = -1 / +3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GYD+PA + VN W I R+ W++P +F PERFE S D KG D+E +PFG G
Sbjct: 234 ACKVGGYDIPANTRLHVNVWTIARNSDFWEKPDEFRPERFEGSALDVKGRDYELLPFGTG 413
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+CPG G F W LP G E+LDM E FG++TP+ L+ +A P
Sbjct: 414 RRMCPGYNLGLKVVHLGLANLIHGFHWCLPDGQNPEDLDMGETFGLSTPKTQPLVAMARP 593
Query: 185 RV 180
R+
Sbjct: 594 RL 599
>gb|CF671978.1|CF671978 RTCNT1_60_B07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_B07_A029 5', mRNA sequence
Length = 748
Score = 137 bits (293), Expect = 7e-032
Identities = 57/124 (45%), Positives = 75/124 (60%)
Frame = -1 / +3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC++ GY VP ++VNAW + RDP W+ P +F P+RF S+ D +G+DF+ IPFGAG
Sbjct: 375 ACEIEGYYVPKNARLMVNAWGMQRDPGVWERPLEFDPDRFIGSSVDVRGSDFQIIPFGAG 554
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RRIC GM+ G FD SLP G E LDM E+FG+ + + LLVV
Sbjct: 555 RRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQPPEALDMAESFGLTLRKAAPLLVVPAA 734
Query: 185 RVPL 174
RVP+
Sbjct: 735 RVPI 746
>gb|CO174545.1|CO174545 NDL1_44_D12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_44_D12_A029 5', mRNA sequence
Length = 668
Score = 137 bits (293), Expect = 7e-032
Identities = 55/123 (44%), Positives = 76/123 (61%)
Frame = -1 / -2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC++ GY +P ++VNAW + R+P W+ P +F P+RF ST D +G DF+ IPFGAG
Sbjct: 655 ACEIEGYYIPKNCRLLVNAWGMQRNPEVWERPLEFDPDRFVGSTVDVRGNDFQLIPFGAG 476
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
+RICPG++ F++SLP G + EELDM EAFG ++ LLVV T
Sbjct: 475 KRICPGLSMALRTVQLMLATLIHSFEFSLPNGQSPEELDMAEAFGFTMRKQVPLLVVPTA 296
Query: 185 RVP 177
R+P
Sbjct: 295 RLP 287
>gb|CF390685.1|CF390685 RTDR2_20_D05.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_D05_A021 5', mRNA
sequence
Length = 740
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 364 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 543
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 544 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 723
Query: 185 RVP 177
R+P
Sbjct: 724 RLP 732
>gb|CF394868.1|CF394868 RTDS2_8_H11.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_H11_A021 3', mRNA sequence
Length = 751
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 14 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 193
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 194 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 373
Query: 185 RVP 177
R+P
Sbjct: 374 RLP 382
>gb|CF394958.1|CF394958 RTDS2_8_H11.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_H11_A021 5', mRNA sequence
Length = 726
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 349 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 528
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 529 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 708
Query: 185 RVP 177
R+P
Sbjct: 709 RLP 717
>gb|CV033413.1|CV033413 RTNACL1_34_H08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H08_A029 3', mRNA sequence
Length = 798
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 167 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 346
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 347 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 526
Query: 185 RVP 177
R+P
Sbjct: 527 RLP 535
>gb|CV033500.1|CV033500 RTNACL1_34_H08.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H08_A029 5', mRNA sequence
Length = 667
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 172 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 351
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 352 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 531
Query: 185 RVP 177
R+P
Sbjct: 532 RLP 540
>gb|CV036239.1|CV036239 RTNACL1_57_E12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_E12_A029 5', mRNA sequence
Length = 713
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 315 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 494
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 495 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 674
Query: 185 RVP 177
R+P
Sbjct: 675 RLP 683
>gb|CV135378.1|CV135378 EST846587 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PICMB24 5' end, mRNA sequence
Length = 871
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 122 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 301
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 302 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 481
Query: 185 RVP 177
R+P
Sbjct: 482 RLP 490
>gb|CX650345.1|CX650345 COLD1_45_C03.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_C03_A029 3', mRNA sequence
Length = 741
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / -1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 585 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 406
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 405 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 226
Query: 185 RVP 177
R+P
Sbjct: 225 RLP 217
>gb|CX650419.1|CX650419 COLD1_45_C03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_C03_A029 5', mRNA sequence
Length = 843
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / -1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 741 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 562
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 561 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 382
Query: 185 RVP 177
R+P
Sbjct: 381 RLP 373
>gb|DN460749.1|DN460749 EST956548 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII213 5' end, mRNA sequence
Length = 720
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 22 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 201
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 202 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 381
Query: 185 RVP 177
R+P
Sbjct: 382 RLP 390
>gb|DR013036.1|DR013036 HEAT1_16_C09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_16_C09_A029 5', mRNA sequence
Length = 709
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / -3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 692 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 513
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 512 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 333
Query: 185 RVP 177
R+P
Sbjct: 332 RLP 324
>gb|DR050330.1|DR050330 RTBOR1_22_F04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_F04_A029 5', mRNA sequence
Length = 796
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 416 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 595
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 596 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 775
Query: 185 RVP 177
R+P
Sbjct: 776 RLP 784
>gb|DR057043.1|DR057043 RTNIT1_2_E01.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_2_E01_A029 3', mRNA sequence
Length = 641
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 20 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 199
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 200 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 379
Query: 185 RVP 177
R+P
Sbjct: 380 RLP 388
>gb|DR092404.1|DR092404 STRR1_1_E06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_E06_A033 3', mRNA sequence
Length = 933
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 308 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 487
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 488 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 667
Query: 185 RVP 177
R+P
Sbjct: 668 RLP 676
>gb|DR092490.1|DR092490 STRR1_1_E06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_E06_A033 5', mRNA sequence
Length = 860
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 415 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 594
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 595 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 774
Query: 185 RVP 177
R+P
Sbjct: 775 RLP 783
>gb|DR160246.1|DR160246 RTFE1_4_H05.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_4_H05_A029 5', mRNA sequence
Length = 768
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / -2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 587 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 408
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 407 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 228
Query: 185 RVP 177
R+P
Sbjct: 227 RLP 219
>gb|DR167219.1|DR167219 RTPHOS1_17_A07.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_17_A07_A029 5', mRNA sequence
Length = 745
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / -2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 717 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 538
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 537 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 358
Query: 185 RVP 177
R+P
Sbjct: 357 RLP 349
>gb|DR384758.1|DR384758 RTHG1_4_H10.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_H10_A029 3', mRNA sequence
Length = 624
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 18 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 197
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 198 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 377
Query: 185 RVP 177
R+P
Sbjct: 378 RLP 386
>gb|DR384838.1|DR384838 RTHG1_4_H10.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_H10_A029 5', mRNA sequence
Length = 723
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 141 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 320
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 321 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 500
Query: 185 RVP 177
R+P
Sbjct: 501 RLP 509
>gb|DR744591.1|DR744591 RTCU1_23_B10.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_B10_A029 5', mRNA sequence
Length = 795
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / -3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 682 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 503
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 502 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 323
Query: 185 RVP 177
R+P
Sbjct: 322 RLP 314
>gb|DT625952.1|DT625952 EST1157876 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA548 5' end, mRNA sequence
Length = 876
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +2
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 122 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 301
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 302 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 481
Query: 185 RVP 177
R+P
Sbjct: 482 RLP 490
>gb|DT626855.1|DT626855 EST1159931 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAS14 5' end, mRNA sequence
Length = 720
Score = 136 bits (292), Expect = 1e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 22 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 201
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 202 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 381
Query: 185 RVP 177
R+P
Sbjct: 382 RLP 390
>gb|CF393317.1|CF393317 RTDR3_20_D09.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_20_D09_A022 5', mRNA
sequence
Length = 774
Score = 73.0 bits (153), Expect(3) = 1e-031
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = -1 / +3
Query: 542 CQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQS 417
C V GY++PAG VIVNAWAIGRDP W++ +F PERF +S
Sbjct: 273 CTVCGYEIPAGTRVIVNAWAIGRDPKSWEDAEEFKPERFTES 398
Score = 55.1 bits (114), Expect(3) = 1e-031
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -1 / +1
Query: 290 DWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATPRVP 177
DW LP G+ +LDM E FG+A PR LL + TPR+P
Sbjct: 535 DWRLPDGMEGRDLDMNEIFGLAIPRAVPLLAIPTPRLP 648
Score = 46.0 bits (94), Expect(3) = 1e-031
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -1 / +3
Query: 410 DFKGADFEFIPFGAGRRICPGMTFG 336
D +G DF+ IPFG+GRR CPGM G
Sbjct: 414 DVRGQDFQLIPFGSGRRGCPGMQLG 488
>gb|CF386135.1|CF386135 RTDR1_8_E10.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_8_E10_A015 5', mRNA
sequence
Length = 649
Score = 136 bits (291), Expect = 1e-031
Identities = 55/123 (44%), Positives = 69/123 (56%)
Frame = -1 / +1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 208 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 387
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G DWSLP G E LDM EA+G+ + LL
Sbjct: 388 RRVCAGVSMGIRMVQLMLASLLHSCDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 567
Query: 185 RVP 177
R+P
Sbjct: 568 RLP 576
>gb|CF387703.1|CF387703 RTDR1_19_C11.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_C11_A015 5', mRNA
sequence
Length = 702
Score = 136 bits (291), Expect = 1e-031
Identities = 55/123 (44%), Positives = 69/123 (56%)
Frame = -1 / -3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 583 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 404
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G DWSLP G E LDM EA+G+ + LL
Sbjct: 403 RRVCAGVSMGIRMVQLMLASLLHSCDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAPVA 224
Query: 185 RVP 177
R+P
Sbjct: 223 RLP 215
>gb|DR025160.1|DR025160 STRS1_70_A08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_70_A08_A034 3', mRNA sequence
Length = 733
Score = 135 bits (290), Expect = 2e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +3
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 18 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 197
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 198 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKVVPLLAAPVA 377
Query: 185 RVP 177
R+P
Sbjct: 378 RLP 386
>gb|DR025238.1|DR025238 STRS1_70_A08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_70_A08_A034 5', mRNA sequence
Length = 727
Score = 135 bits (290), Expect = 2e-031
Identities = 56/123 (45%), Positives = 70/123 (56%)
Frame = -1 / +1
Query: 545 ACQVLGYDVPAGITVIVNAWAIGRDPAPWDEPXKFLPERFEQSTRDFKGADFEFIPFGAG 366
AC+V GY +P ++VNAW I RDP W+ P +F PERF S D +G DFE IPFGAG
Sbjct: 343 ACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAG 522
Query: 365 RRICPGMTFGXXXXXXXXXXXXXXFDWSLPGGLTAEELDMTEAFGIATPRRSDLLVVATP 186
RR+C G++ G FDWSLP G E LDM EA+G+ + LL
Sbjct: 523 RRVCAGVSMGIRMVQLMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKVVPLLAAPVA 702
Query: 185 RVP 177
R+P
Sbjct: 703 RLP 711
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 274,502,929
Number of Sequences: 355925
Number of extensions: 3686134
Number of successful extensions: 47436
Number of sequences better than 1.0e-020: 307
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 7218384810
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)