TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3665414.2.1
(3330 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW869853.1|AW869853 NXNV_122_C07_F Nsf Xylem Normal wood... 342 7e-093
gb|DR117407.1|DR117407 RTMG1_6_F10.g1_A029 Roots minus magn... 171 1e-065
gb|DR049929.1|DR049929 RTBOR1_20_C02.b1_A029 Roots plus add... 168 1e-063
gb|DR683825.1|DR683825 EST1073901 Normalized pine embryo li... 237 5e-061
gb|DT631716.1|DT631716 EST1146647 Normalized pine embryo li... 237 5e-061
gb|CV034050.1|CV034050 RTNACL1_38_G01.b1_A029 Roots plus ad... 235 2e-060
gb|DR689458.1|DR689458 EST1079544 Normalized pine embryo li... 232 8e-060
gb|DT635537.1|DT635537 EST1150468 Normalized pine embryo li... 232 8e-060
gb|DR018819.1|DR018819 STRS1_25_H09.g1_A034 Shoot tip pitch... 227 3e-058
gb|DT637931.1|DT637931 EST1152862 Normalized pine embryo li... 196 7e-058
gb|CF401310.1|CF401310 RTWW1_11_E11.g1_A015 Well-watered lo... 105 1e-057
gb|DR684550.1|DR684550 EST1074627 Normalized pine embryo li... 139 3e-056
gb|DR060775.1|DR060775 RTNIT1_30_A04.b1_A029 Roots minus ni... 133 7e-056
gb|CV034119.1|CV034119 RTNACL1_38_G01.g1_A029 Roots plus ad... 219 1e-055
gb|BX250464.1|BX250464 BX250464 Pinus pinaster differenciat... 218 2e-055
gb|DR687924.1|DR687924 EST1078007 Normalized pine embryo li... 192 6e-050
gb|DR693421.1|DR693421 EST1083509 Normalized pine embryo li... 196 7e-049
gb|DT634529.1|DT634529 EST1149460 Normalized pine embryo li... 192 1e-047
gb|CF664702.1|CF664702 RTCNT1_11_A07.g1_A029 Root control P... 85 1e-047
gb|DR023271.1|DR023271 STRS1_56_B12.g1_A034 Shoot tip pitch... 184 2e-047
gb|CF477770.1|CF477770 RTWW3_9_E01.g1_A022 Well-watered lob... 83 4e-047
gb|DR119636.1|DR119636 RTMG1_24_B06.g1_A029 Roots minus mag... 84 6e-047
gb|AW290589.1|AW290589 NXNV031H03F Nsf Xylem Normal wood Ve... 189 1e-046
gb|CD027256.1|CD027256 NXNV031H03 Nsf Xylem Normal wood Ver... 189 1e-046
gb|DR088977.1|DR088977 RTAL1_5_G05.g1_A029 Roots plus added... 182 9e-045
gb|CO166677.1|CO166677 FLD1_63_E10.g1_A029 Root flooded Pin... 180 6e-044
gb|DR163514.1|DR163514 RTFE1_43_H03.b1_A029 Roots minus iro... 180 6e-044
gb|DR163606.1|DR163606 RTFE1_43_H03.g1_A029 Roots minus iro... 180 6e-044
gb|CX652350.1|CX652350 COLD1_58_B10.g1_A029 Root cold Pinus... 177 3e-043
gb|DR095991.1|DR095991 STRR1_25_B08.b1_A033 Stem Response R... 177 3e-043
gb|DR047931.1|DR047931 RTBOR1_5_C10.g2_A029 Roots plus adde... 177 4e-043
gb|DR018738.1|DR018738 STRS1_25_H09.b1_A034 Shoot tip pitch... 177 6e-043
gb|DR060851.1|DR060851 RTNIT1_30_A04.g1_A029 Roots minus ni... 177 6e-043
gb|CO196899.1|CO196899 GEO1_2_A08.g1_A029 Root gravitropism... 111 2e-039
gb|CO164524.1|CO164524 FLD1_48_D01.g1_A029 Root flooded Pin... 73 2e-038
gb|CF393824.1|CF393824 RTDS2_1_H10.g1_A021 Drought-stressed... 75 1e-037
gb|CF394944.1|CF394944 RTDS2_8_H03.g1_A021 Drought-stressed... 84 1e-036
gb|DR387555.1|DR387555 RTHG1_22_D06.g2_A029 Roots plus adde... 82 2e-036
gb|DR014997.1|DR014997 HEAT1_52_H03.g1_A029 Root at 37 C fo... 81 8e-036
gb|CO362980.1|CO362980 RTK1_6_H11.g1_A029 Roots minus potas... 84 4e-035
gb|DR014911.1|DR014911 HEAT1_52_H03.b1_A029 Root at 37 C fo... 84 6e-035
gb|DR162414.1|DR162414 RTFE1_17_D12.g1_A029 Roots minus iro... 85 6e-035
gb|BX255099.1|BX255099 BX255099 Pinus pinaster differenciat... 149 1e-034
gb|DR058919.1|DR058919 RTNIT1_14_E01.g1_A029 Roots minus ni... 93 2e-034
gb|CO165495.1|CO165495 FLD1_54_H08.g1_A029 Root flooded Pin... 143 2e-034
gb|CO165413.1|CO165413 FLD1_54_H08.b1_A029 Root flooded Pin... 143 2e-034
gb|DR088892.1|DR088892 RTAL1_5_G05.b1_A029 Roots plus added... 148 3e-034
gb|DR098431.1|DR098431 STRR1_45_A08.g1_A033 Stem Response R... 84 4e-034
gb|DR057984.1|DR057984 RTNIT1_9_A09.b1_A029 Roots minus nit... 84 6e-032
gb|DR049315.1|DR049315 RTBOR1_15_H05.b1_A029 Roots plus add... 106 2e-031
gb|DR169202.1|DR169202 RTPHOS1_30_F04.g1_A029 Roots minus p... 84 2e-031
gb|DR096892.1|DR096892 STRR1_31_C08.b1_A033 Stem Response R... 79 3e-031
gb|DR049993.1|DR049993 RTBOR1_20_C02.g1_A029 Roots plus add... 106 5e-031
gb|DR052663.1|DR052663 RTCA1_6_C03.b1_A029 Roots minus calc... 81 2e-030
gb|DR180184.1|DR180184 RTMNUT1_27_B03.b1_A029 Roots minus m... 93 6e-030
gb|CO172421.1|CO172421 NDL1_29_D06.g1_A029 Needles control ... 101 1e-029
gb|CO368613.1|CO368613 RTK1_41_E08.g1_A029 Roots minus pota... 63 2e-029
gb|CF395349.1|CF395349 RTDS2_11_A05.b1_A021 Drought-stresse... 105 4e-029
gb|CO200744.1|CO200744 RTCNT2_1_F05.b1_A029 Root control 2 ... 65 5e-029
gb|DN460665.1|DN460665 EST956464 Sequencing ESTs from loblo... 65 6e-029
gb|CN784748.1|CN784748 EST783439 Sequencing ESTs from loblo... 65 6e-029
gb|DR385591.1|DR385591 RTHG1_9_D01.g1_A029 Roots plus added... 65 6e-029
gb|DN458909.1|DN458909 EST954708 Sequencing ESTs from loblo... 65 6e-029
gb|DN462529.1|DN462529 EST958328 Sequencing ESTs from loblo... 65 6e-029
gb|DN450293.1|DN450293 EST946092 Sequencing ESTs from loblo... 65 8e-029
gb|DN457155.1|DN457155 EST952954 Sequencing ESTs from loblo... 65 8e-029
gb|CO170267.1|CO170267 NDL1_12_G06.g1_A029 Needles control ... 67 8e-029
gb|DR049307.1|DR049307 RTBOR1_15_G04.b1_A029 Roots plus add... 98 8e-029
gb|CO172345.1|CO172345 NDL1_29_D06.b1_A029 Needles control ... 101 1e-028
gb|CF387106.1|CF387106 RTDR1_10_C01.g1_A015 Loblolly pine r... 68 3e-028
gb|DR049360.1|DR049360 RTBOR1_15_H05.g1_A029 Roots plus add... 127 4e-028
gb|CF472415.1|CF472415 RTDS1_9_E10.g1_A015 Drought-stressed... 67 5e-028
gb|DT625802.1|DT625802 EST1157726 Sequencing ESTs from lobl... 60 2e-027
gb|CN783836.1|CN783836 EST782527 Sequencing ESTs from loblo... 60 2e-027
gb|DR060931.1|DR060931 RTNIT1_31_A01.b1_A029 Roots minus ni... 67 2e-027
gb|DR058708.1|DR058708 RTNIT1_13_A02.g1_A029 Roots minus ni... 93 2e-027
gb|CO362892.1|CO362892 RTK1_6_H11.b1_A029 Roots minus potas... 73 4e-027
gb|CV134844.1|CV134844 EST846053 Sequencing ESTs from loblo... 65 6e-027
gb|DN451101.1|DN451101 EST946900 Sequencing ESTs from loblo... 65 6e-027
gb|DR058625.1|DR058625 RTNIT1_13_A02.b1_A029 Roots minus ni... 123 6e-027
gb|CO200166.1|CO200166 GEO2_5_G03.g1_A032 Root gravitropism... 62 3e-026
gb|DR058057.1|DR058057 RTNIT1_9_A09.g1_A029 Roots minus nit... 85 3e-026
gb|DR685470.1|DR685470 EST1075547 Normalized pine embryo li... 65 5e-026
gb|CO369353.1|CO369353 RTK1_46_B12.g1_A029 Roots minus pota... 68 8e-026
gb|BE209241.1|BE209241 NXNV_147_G05_F Nsf Xylem Normal wood... 72 8e-026
gb|CO197618.1|CO197618 GEO1_7_F08.g1_A029 Root gravitropism... 84 1e-025
gb|DR689197.1|DR689197 EST1079283 Normalized pine embryo li... 65 2e-025
gb|AW011438.1|AW011438 ST20G06 Pine TriplEx shoot tip libra... 90 3e-025
gb|CO200055.1|CO200055 GEO2_5_D12.b1_A032 Root gravitropism... 62 1e-024
gb|CO200140.1|CO200140 GEO2_5_D12.g1_A032 Root gravitropism... 62 1e-024
gb|DR058015.1|DR058015 RTNIT1_9_D10.b1_A029 Roots minus nit... 90 3e-024
gb|CO157875.1|CO157875 FLD1_2_E10.g1_A029 Root flooded Pinu... 84 5e-024
gb|DR058833.1|DR058833 RTNIT1_14_E01.b1_A029 Roots minus ni... 113 6e-024
gb|DR081667.1|DR081667 RTFEPL1_31_G04.b1_A029 Roots plus ad... 67 6e-024
gb|DR169129.1|DR169129 RTPHOS1_30_F04.b1_A029 Roots minus p... 84 2e-023
gb|CX651341.1|CX651341 COLD1_51_E09.g1_A029 Root cold Pinus... 68 3e-023
gb|DN458660.1|DN458660 EST954459 Sequencing ESTs from loblo... 65 4e-023
gb|BE496448.1|BE496448 NXCI_018_C03_F NXCI (Nsf Xylem Compr... 84 8e-023
gb|DT639050.1|DT639050 EST1153981 Normalized pine embryo li... 66 1e-022
gb|DR695139.1|DR695139 EST1085232 Normalized pine embryo li... 66 1e-022
gb|CF397665.1|CF397665 RTDS3_1_F09.b2_A022 Drought-stressed... 73 2e-022
gb|DR161128.1|DR161128 RTFE1_10_B05.b1_A029 Roots minus iro... 64 3e-022
gb|BF221031.1|BF221031 NXCI_162_C07_F NXCI (Nsf Xylem Compr... 84 3e-022
gb|DN458821.1|DN458821 EST954620 Sequencing ESTs from loblo... 65 3e-022
gb|DN458496.1|DN458496 EST954295 Sequencing ESTs from loblo... 65 3e-022
gb|DT625303.1|DT625303 EST1159578 Sequencing ESTs from lobl... 65 3e-022
gb|BF220654.1|BF220654 NXCI_151_B05_F NXCI (Nsf Xylem Compr... 83 5e-022
gb|BF186390.1|BF186390 NXCI_141_F12_F NXCI (Nsf Xylem Compr... 84 7e-022
gb|DR182380.1|DR182380 RTMNUT1_44_D11.g1_A029 Roots minus m... 63 1e-021
gb|CF386583.1|CF386583 RTDR1_15_E05.g1_A015 Loblolly pine r... 63 1e-021
gb|BE458071.1|BE458071 NXCI_005_F03_F NXCI (Nsf Xylem Compr... 84 1e-021
gb|DN461068.1|DN461068 EST956867 Sequencing ESTs from loblo... 65 1e-021
gb|CV139147.1|CV139147 EST850356 Sequencing ESTs from loblo... 65 1e-021
gb|DR119561.1|DR119561 RTMG1_24_B06.b1_A029 Roots minus mag... 84 2e-021
gb|DT636525.1|DT636525 EST1151456 Normalized pine embryo li... 66 2e-021
gb|BM428527.1|BM428527 NXRV_018_A05_F NXRV (Nsf Xylem Root ... 66 2e-021
gb|DR057892.1|DR057892 RTNIT1_8_A06.g1_A029 Roots minus nit... 65 2e-021
gb|DT635149.1|DT635149 EST1150080 Normalized pine embryo li... 65 3e-021
gb|BX252872.1|BX252872 BX252872 Pinus pinaster differenciat... 65 7e-021
gb|DR746421.1|DR746421 RTCU1_36_G10.g1_A029 Roots plus adde... 62 9e-021
gb|DR098231.1|DR098231 STRR1_40_A11.b1_A033 Stem Response R... 65 1e-020
>gb|AW869853.1|AW869853 NXNV_122_C07_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_122_C07 5' similar to Arabidopsis thaliana sequence
At5g58140 non phototropic hypocotyl 1-like (NPL1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 606
Score = 342 bits (742), Expect = 7e-093
Identities = 144/200 (72%), Positives = 158/200 (79%)
Frame = +1 / +2
Query: 2230 EYFAMKAMDKSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGG 2409
E FAMKAMDK VMLNRNKVHRA ER+I+ LDHPFLPTLYASFQTKTH+CLI D+ GG
Sbjct: 2 ELFAMKAMDKEVMLNRNKVHRACIEREIMATLDHPFLPTLYASFQTKTHVCLITDFAPGG 181
Query: 2410 ELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTD 2589
ELFML+DRQPMKVL+EDA RFY AEVV ALEYLHCQGI+YRDLKPEN+LL DGH+ LTD
Sbjct: 182 ELFMLVDRQPMKVLREDAARFYVAEVVVALEYLHCQGIVYRDLKPENLLLQSDGHLLLTD 361
Query: 2590 FDLSCLTSCRPQVFLPHDIDXXXXXXXXXXNPIFFAEPMRASNSFVGTEEYIAPEIITGA 2769
FDLS L SC+PQ+ +I P F AEP ASNSFVGTEEYIAPEIITG
Sbjct: 362 FDLSYLASCKPQLIKYTEIPGKTRKMKNEPPPTFVAEPTIASNSFVGTEEYIAPEIITGT 541
Query: 2770 GHTSAVDWWALGILLYEMLY 2829
GH+SAV LGILLYE+LY
Sbjct: 542 GHSSAVXXXXLGILLYELLY 601
Score = 224 bits (484), Expect = 3e-057
Identities = 108/197 (54%), Positives = 124/197 (62%)
Frame = -2 / -1
Query: 2819 SYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFDARIGSAKNMGXXXXXXXXXXLSIS 2640
SY +IP STAL+ P PV+ISGA+YSSVPTKEF+A +GSA N+G IS
Sbjct: 591 SYNKIPRXXXSTALL*PVPVMISGAIYSSVPTKEFEAIVGSATNVGGGSFFIFLVFPGIS 412
Query: 2639 CGRNTCGRQDVKQDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXX 2460
CG QD K DKSKSVN PSL*S FSGF+SL* IPWQ RY
Sbjct: 411 VYFINCGLQDAKYDKSKSVNNKWPSL*SNKFSGFRSL*TIPWQ*RYSKATTTSAT*NRAA 232
Query: 2459 XSFRTFIGCLSRSIKSSPPAQ*STIRHICVFV*NDAYNVGRNGWSNISRICRSAVALWTL 2280
S RTFIGCLS S+KSSPP S I+H CVFV* DA +VGR GWSN++ I S A TL
Sbjct: 231 SSRRTFIGCLSTSMKSSPPGAKSVIKHTCVFV*KDA*SVGRKGWSNVAIISLSIQARCTL 52
Query: 2279 FRLSMTLLSIAFMAKYS 2229
R ++T LSIAF+A S
Sbjct: 51 LRFNITSLSIAFIANNS 1
Score = 114 bits (244), Expect(2) = 6e-029
Identities = 53/132 (40%), Positives = 79/132 (59%)
Frame = -1 / -3
Query: 2625 LWSAGCQARQIKVCQ*NVPISMK*NVLWL*VSVDYTLAM*VFKCCDHFCSIEPDRILLQN 2446
LW GCQ +++CQ* + I++K V L +SV+ LAM + + ++ C IE I +N
Sbjct: 397 LWFTGCQI**VEICQ**MAIALKQQVFRLQISVNNPLAMKILQSDNNLCYIESSSIFTKN 218
Query: 2445 LHRLPIKEHKEFPTSTIVNNKTYMCLCLK*CIQCRKEWVVQHIKDLSFSGSSMDLVSVKH 2266
LHRL + EH++ + ++N ++CL LK CI+C KE +VQ SF SSM L++V H
Sbjct: 217 LHRLSVYEHEKLSSRGKISN*AHVCLRLKRCIKCWKERMVQRCHYFSFDTSSMHLITV*H 38
Query: 2265 DTFIHSFHGKVF 2230
+H FH K F
Sbjct: 37 HFLVHCFHCKQF 2
Score = 35.4 bits (71), Expect(2) = 6e-029
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1 / -3
Query: 2784 STRMASSGNNLRCNVLLCTNKRI*CSHWFSKK 2689
S M + N+ RC++ C KR+* + WF K
Sbjct: 556 SATMTCASNDFRCDIFFCPYKRV*SNCWFCNK 461
>gb|DR117407.1|DR117407 RTMG1_6_F10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_F10_A029 5', mRNA sequence
Length = 831
Score = 171 bits (368), Expect(2) = 1e-065
Identities = 67/118 (56%), Positives = 85/118 (72%)
Frame = +1 / +3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
SNSFVGT EY+APEI+ G GH SAVDWW GI LYE+L+G TPF+G T N++ +
Sbjct: 477 SNSFVGTHEYLAPEIVKGEGHGSAVDWWTYGIFLYELLFGKTPFKGAGNTATLNNVVGQP 656
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPP 3066
++FP + VS AA+ LI LL ++P +RL GA EIKQHPFF G+NWAL+R +TPP
Sbjct: 657 LKFPETPVVSYAAKDLIRGLLVKEPQHRLAFKRGATEIKQHPFFEGLNWALIRCSTPP 830
Score = 127 bits (271), Expect(2) = 4e-033
Identities = 63/118 (53%), Positives = 71/118 (60%)
Frame = -2 / -3
Query: 3065 GGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLAGNLISL 2886
GGV R RAQF P KKGCCLIS+AP + GS S I LAA LT ++GNL
Sbjct: 829 GGVEQRIRAQFKPSKKGCCLISVAPRLNANRCCGSFTSKPLIKSLAA*LTTGVSGNLRGC 650
Query: 2885 CRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFD 2712
L +V L PL GV P SY+ IP HQSTAL P+P+ ISGA YS VPT EFD
Sbjct: 649 PTTLLSVAVLPAPLNGVFPNRSSYKNIP*VHQSTALP*PSPLTISGAKYSCVPTNEFD 476
Score = 106 bits (226), Expect(2) = 1e-065
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = +1 / +3
Query: 2398 CAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHI 2577
C GG+L +L R + E A RFYAAEV+ ALEYLH GI+YRDLKPEN+L+ DGHI
Sbjct: 3 CPGGDLHILRQRHSGRNFSEQAARFYAAEVLLALEYLHMLGIVYRDLKPENVLVREDGHI 182
Query: 2578 SLTDFDLSCLTSCRPQVFLPHDID 2649
L+DFDLS + P + +D
Sbjct: 183 MLSDFDLSLRCAVSPTLVKSSPVD 254
Score = 41.8 bits (85), Expect(2) = 4e-033
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -2 / -3
Query: 2603 QDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRY 2502
+DKSKS + +CPS ++ FSG +SL IP CRY
Sbjct: 208 KDKSKSESIICPSSLTRTFSGLRSLYTIPSICRY 107
>gb|DR049929.1|DR049929 RTBOR1_20_C02.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_20_C02_A029 3', mRNA sequence
Length = 774
Score = 168 bits (362), Expect(2) = 1e-063
Identities = 70/128 (54%), Positives = 88/128 (68%)
Frame = +1 / -3
Query: 2224 TGEYFAMKAMDKSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCA 2403
+G AMK M+K +M + RA E++IL LDHPFLP L+ F+++ H L++ YC+
Sbjct: 772 SGNPVAMKVMNKELMQKKRSHKRARMEKEILQKLDHPFLPKLFTKFESENHSFLLMSYCS 593
Query: 2404 GGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISL 2583
GG+L L RQ + E A RFYAAEVV ALEYLH GI+YRDLKPENILL DGHI +
Sbjct: 592 GGDLNTLRQRQKNRRFSESAARFYAAEVVLALEYLHQHGILYRDLKPENILLQADGHIMI 413
Query: 2584 TDFDLSCL 2607
TDFDLS +
Sbjct: 412 TDFDLSLI 389
Score = 102 bits (217), Expect(2) = 1e-063
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +1 / -3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTF 2871
S+SFVGTEEY+APEI+ G GH AVDWWA GILLYEM+YG TPF+G TR+ TF
Sbjct: 163 SHSFVGTEEYVAPEILWGKGHGVAVDWWAFGILLYEMVYGKTPFKGCTRKETF 5
Score = 83.1 bits (175), Expect(3) = 4e-027
Identities = 37/53 (69%), Positives = 37/53 (69%)
Frame = -2 / +3
Query: 2870 NVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFD 2712
NV LV PLKGV PY ISY IP AHQSTA WP P ISGA YSSVPT E D
Sbjct: 6 NVSFLVHPLKGVFPYTISYNNIPKAHQSTATPWPLPHKISGATYSSVPTNE*D 164
Score = 56.5 bits (117), Expect(3) = 4e-027
Identities = 29/69 (42%), Positives = 34/69 (49%)
Frame = -2 / +3
Query: 2600 DKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXXXSFRTFIGCLSRS 2421
++SKSV +CPS *S MFSGFKSL IP C+Y S CL
Sbjct: 396 ERSKSVIMICPSA*SNMFSGFKSLYKIPCWCKYSSASTTSAA*NLAADSENLLFFCLCLR 575
Query: 2420 IKSSPPAQ* 2394
+ SPP Q*
Sbjct: 576 VLRSPPEQ* 602
Score = 30.4 bits (60), Expect(3) = 4e-027
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2 / +3
Query: 2360 NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTLLSIAFMAKYSP 2226
N ++G+ GWS+ +I S AL L ++ L I FMA P
Sbjct: 636 NFVKSLGKKGWSSFCKISFSIRALLWLLFFCISSLFITFMATGFP 770
>gb|DR683825.1|DR683825 EST1073901 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAL70 3' end, mRNA sequence
Length = 788
Score = 237 bits (511), Expect = 5e-061
Identities = 99/191 (51%), Positives = 127/191 (66%)
Frame = +1 / +3
Query: 2077 KPHMKDTASWRAIQKVLENGESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMD 2256
+PHM + + W AI+ V + + L HFR V+ LG GD GSV+L EL T YFAMK M+
Sbjct: 75 RPHMSNDSRWEAIRAVRKRDGCLGLNHFRLVKRLGCGDIGSVYLTELDRTKCYFAMKVME 254
Query: 2257 KSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
++R K+ RA ER+IL MLDHPFLPTLY F+T CL+++YC GG+L +L RQ
Sbjct: 255 NGPSVSRKKMLRAQTEREILQMLDHPFLPTLYTHFETDKFSCLVMEYCPGGDLHILRQRQ 434
Query: 2437 PMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSC 2616
P + E A RFYAAEV+ ALEYLH GI+YRDLKPEN+L+ DGHI L+DFDLS +
Sbjct: 435 PGRNFSEQAARFYAAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAV 614
Query: 2617 RPQVFLPHDID 2649
P + +D
Sbjct: 615 SPTLVKSSPVD 647
Score = 89.5 bits (189), Expect(2) = 2e-023
Identities = 51/112 (45%), Positives = 60/112 (53%)
Frame = -2 / -2
Query: 2438 GCLSRSIKSSPPAQ*STIRHICVFV*NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTL 2259
GC RS+ SPP Q S +H + V YNVGRNG S+I I S AL FRL+
Sbjct: 436 GCRCRSMWRSPPGQYSITKHENLSVSK*VYNVGRNG*SSI*SISLSV*ALSIFFRLTEGP 257
Query: 2258 LSIAFMAKYSPVPSNSTKWTLPVSPDPKGLTGLKCFKSMLSPFSRTFWMALH 2103
SI FMAK V SNS ++TLP+SP P T LK F RT +A H
Sbjct: 256 FSITFMAK*HFVRSNSVRYTLPMSPQPNRFTNLKWFNPKHPSLFRTARIASH 101
Score = 41.8 bits (85), Expect(2) = 2e-023
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -2 / -2
Query: 2603 QDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRY 2502
+DKSKS + +CPS ++ FSG +SL IP CRY
Sbjct: 601 KDKSKSESIICPSSLTRTFSGLRSLYTIPSICRY 500
>gb|DT631716.1|DT631716 EST1146647 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFB84 3' end, mRNA sequence
Length = 792
Score = 237 bits (511), Expect = 5e-061
Identities = 99/191 (51%), Positives = 127/191 (66%)
Frame = +1 / +2
Query: 2077 KPHMKDTASWRAIQKVLENGESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMD 2256
+PHM + + W AI+ V + + L HFR V+ LG GD GSV+L EL T YFAMK M+
Sbjct: 83 RPHMSNDSRWEAIRAVRKRDGCLGLNHFRLVKRLGCGDIGSVYLTELDRTKCYFAMKVME 262
Query: 2257 KSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
++R K+ RA ER+IL MLDHPFLPTLY F+T CL+++YC GG+L +L RQ
Sbjct: 263 NGPSVSRKKMLRAQTEREILQMLDHPFLPTLYTHFETDKFSCLVMEYCPGGDLHILRQRQ 442
Query: 2437 PMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSC 2616
P + E A RFYAAEV+ ALEYLH GI+YRDLKPEN+L+ DGHI L+DFDLS +
Sbjct: 443 PGRNFSEQAARFYAAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAV 622
Query: 2617 RPQVFLPHDID 2649
P + +D
Sbjct: 623 SPTLVKSSPVD 655
Score = 89.5 bits (189), Expect(2) = 2e-023
Identities = 51/112 (45%), Positives = 60/112 (53%)
Frame = -2 / -1
Query: 2438 GCLSRSIKSSPPAQ*STIRHICVFV*NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTL 2259
GC RS+ SPP Q S +H + V YNVGRNG S+I I S AL FRL+
Sbjct: 444 GCRCRSMWRSPPGQYSITKHENLSVSK*VYNVGRNG*SSI*SISLSV*ALSIFFRLTEGP 265
Query: 2258 LSIAFMAKYSPVPSNSTKWTLPVSPDPKGLTGLKCFKSMLSPFSRTFWMALH 2103
SI FMAK V SNS ++TLP+SP P T LK F RT +A H
Sbjct: 264 FSITFMAK*HFVRSNSVRYTLPMSPQPNRFTNLKWFNPKHPSLFRTARIASH 109
Score = 41.8 bits (85), Expect(2) = 2e-023
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -2 / -1
Query: 2603 QDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRY 2502
+DKSKS + +CPS ++ FSG +SL IP CRY
Sbjct: 609 KDKSKSESIICPSSLTRTFSGLRSLYTIPSICRY 508
>gb|CV034050.1|CV034050 RTNACL1_38_G01.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_G01_A029 3', mRNA sequence
Length = 796
Score = 235 bits (507), Expect = 2e-060
Identities = 98/191 (51%), Positives = 126/191 (65%)
Frame = +1 / +3
Query: 2077 KPHMKDTASWRAIQKVLENGESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMD 2256
KPH + W AI + + ++ L HFR ++ LG GD GSV+L EL GT YFAMK MD
Sbjct: 90 KPHKANDPRWEAILAIQKRDVTLGLSHFRLLKRLGCGDIGSVYLAELSGTRCYFAMKVMD 269
Query: 2257 KSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
K+ + +R K+ RA ER+IL LDHPFLPTLY F+T CL++++C GG+L L RQ
Sbjct: 270 KASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQ 449
Query: 2437 PMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSC 2616
P K E A RFYAAEV+ +LEYLH G++YRDLKPEN+L+ DGHI L+DFDLS +
Sbjct: 450 PGKHFSELAARFYAAEVLLSLEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCAV 629
Query: 2617 RPQVFLPHDID 2649
P + ID
Sbjct: 630 NPTLVKSSSID 662
Score = 117 bits (251), Expect = 4e-025
Identities = 63/150 (42%), Positives = 79/150 (52%)
Frame = -2 / -1
Query: 2606 KQDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXXXSFRTFIGCLS 2427
++DKSKS + +CPS ++ FSG +SL P CRY S + GC
Sbjct: 619 RKDKSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKERRTSAA*NRAASSEKCLPGCRC 440
Query: 2426 RSIKSSPPAQ*STIRHICVFV*NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTLLSIA 2247
RS+ SPP Q S +H + V YNVGR G SN RI S AL FRL+ LSI
Sbjct: 439 RSVCRSPPGQNSITKHENLSVSKCVYNVGRKG*SNDCRISLSV*ALSNFFRLARDALSIT 260
Query: 2246 FMAKYSPVPSNSTKWTLPVSPDPKGLTGLK 2157
F+AK VP NS ++TLP+SP P LK
Sbjct: 259 FIAK*HLVPLNSARYTLPMSPHPNLFNNLK 170
>gb|DR689458.1|DR689458 EST1079544 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACI92 3' end, mRNA sequence
Length = 760
Score = 232 bits (502), Expect = 8e-060
Identities = 99/191 (51%), Positives = 122/191 (63%)
Frame = +1 / +1
Query: 2077 KPHMKDTASWRAIQKVLENGESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMD 2256
KPH + W AI+ V + L HFR ++ LG GD GSV+L EL G YFAMK MD
Sbjct: 109 KPHKSNDIRWEAIRAVRMKDGILGLSHFRLLKRLGCGDIGSVYLSELSGMRCYFAMKVMD 288
Query: 2257 KSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
K + +R K+ RA ER+IL LDHPFLPTLY F+T CL+++YC GG+L L RQ
Sbjct: 289 KGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEYCPGGDLHTLRQRQ 468
Query: 2437 PMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSC 2616
P K E AVRFY AEV+ ALEYLH G++YRDLKPEN+L+ DGHI L+DFDLS
Sbjct: 469 PGKHFSEQAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVV 648
Query: 2617 RPQVFLPHDID 2649
P + +D
Sbjct: 649 SPTLVKSTSVD 681
Score = 117 bits (250), Expect = 5e-025
Identities = 66/167 (39%), Positives = 86/167 (51%)
Frame = -2 / -3
Query: 2603 QDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXXXSFRTFIGCLSR 2424
+++SKS + +CPS ++ FSG +SL P CRY S + F GC R
Sbjct: 635 RERSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKARRTSAT*NRTACSEKCFPGCRCR 456
Query: 2423 SIKSSPPAQ*STIRHICVFV*NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTLLSIAF 2244
S+ SPP Q S RH + V YNVGR G S RI S AL + FRL+ LSI F
Sbjct: 455 SVCRSPPGQYSITRHENLSVSKWVYNVGRKG*SRDCRISLSV*ALRSFFRLAKEPLSITF 276
Query: 2243 MAKYSPVPSNSTKWTLPVSPDPKGLTGLKCFKSMLSPFSRTFWMALH 2103
+AK +P +S + TLP+SP P L+ LK + F T MA H
Sbjct: 275 IAK*HLIPLSSER*TLPISPHPSLLSNLKWLNPKIPSFILTALMASH 135
>gb|DT635537.1|DT635537 EST1150468 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGH89 3' end, mRNA sequence
Length = 768
Score = 232 bits (502), Expect = 8e-060
Identities = 99/191 (51%), Positives = 122/191 (63%)
Frame = +1 / +3
Query: 2077 KPHMKDTASWRAIQKVLENGESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMD 2256
KPH + W AI+ V + L HFR ++ LG GD GSV+L EL G YFAMK MD
Sbjct: 117 KPHKSNDIRWEAIRAVRMKDGILGLSHFRLLKRLGCGDIGSVYLSELSGMRCYFAMKVMD 296
Query: 2257 KSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
K + +R K+ RA ER+IL LDHPFLPTLY F+T CL+++YC GG+L L RQ
Sbjct: 297 KGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEYCPGGDLHTLRQRQ 476
Query: 2437 PMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSC 2616
P K E AVRFY AEV+ ALEYLH G++YRDLKPEN+L+ DGHI L+DFDLS
Sbjct: 477 PGKHFSEQAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVV 656
Query: 2617 RPQVFLPHDID 2649
P + +D
Sbjct: 657 SPTLVKSTSVD 689
Score = 117 bits (250), Expect = 5e-025
Identities = 66/167 (39%), Positives = 86/167 (51%)
Frame = -2 / -3
Query: 2603 QDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXXXSFRTFIGCLSR 2424
+++SKS + +CPS ++ FSG +SL P CRY S + F GC R
Sbjct: 643 RERSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKARRTSAT*NRTACSEKCFPGCRCR 464
Query: 2423 SIKSSPPAQ*STIRHICVFV*NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTLLSIAF 2244
S+ SPP Q S RH + V YNVGR G S RI S AL + FRL+ LSI F
Sbjct: 463 SVCRSPPGQYSITRHENLSVSKWVYNVGRKG*SRDCRISLSV*ALRSFFRLAKEPLSITF 284
Query: 2243 MAKYSPVPSNSTKWTLPVSPDPKGLTGLKCFKSMLSPFSRTFWMALH 2103
+AK +P +S + TLP+SP P L+ LK + F T MA H
Sbjct: 283 IAK*HLIPLSSER*TLPISPHPSLLSNLKWLNPKIPSFILTALMASH 143
>gb|DR018819.1|DR018819 STRS1_25_H09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_25_H09_A034 5', mRNA sequence
Length = 801
Score = 227 bits (491), Expect = 3e-058
Identities = 95/182 (52%), Positives = 122/182 (67%)
Frame = +1 / +3
Query: 2104 WRAIQKVLENGESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNK 2283
W AI + + ++ L HFR ++ LG GD GSV+L EL GT YFAMK MDK+ + +R K
Sbjct: 12 WEAILAIQKRDVTLGLSHFRLLKRLGCGDIGSVYLAELSGTRCYFAMKVMDKASLASRKK 191
Query: 2284 VHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQPMKVLKEDA 2463
+ RA ER+IL LDHPFLPTLY F+T CL++++C GG+L L RQP K E A
Sbjct: 192 LLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKHFSELA 371
Query: 2464 VRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRPQVFLPHD 2643
RFYAAEV+ +LEYLH G++YRDLKPEN+L+ DGHI L+DFDLS + P +
Sbjct: 372 ARFYAAEVLLSLEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCAVNPTLVKSSS 551
Query: 2644 ID 2649
ID
Sbjct: 552 ID 557
Score = 117 bits (251), Expect = 4e-025
Identities = 63/150 (42%), Positives = 79/150 (52%)
Frame = -2 / -3
Query: 2606 KQDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXXXSFRTFIGCLS 2427
++DKSKS + +CPS ++ FSG +SL P CRY S + GC
Sbjct: 514 RKDKSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKERRTSAA*NRAASSEKCLPGCRC 335
Query: 2426 RSIKSSPPAQ*STIRHICVFV*NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTLLSIA 2247
RS+ SPP Q S +H + V YNVGR G SN RI S AL FRL+ LSI
Sbjct: 334 RSVCRSPPGQNSITKHENLSVSKCVYNVGRKG*SNDCRISLSV*ALSNFFRLARDALSIT 155
Query: 2246 FMAKYSPVPSNSTKWTLPVSPDPKGLTGLK 2157
F+AK VP NS ++TLP+SP P LK
Sbjct: 154 FIAK*HLVPLNSARYTLPMSPHPNLFNNLK 65
>gb|DT637931.1|DT637931 EST1152862 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH920 3' end, mRNA sequence
Length = 848
Score = 196 bits (423), Expect(2) = 7e-058
Identities = 81/153 (52%), Positives = 105/153 (68%)
Frame = +1 / +3
Query: 2149 LKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQILDMLD 2328
+ FRP+R LG GD G+V+L + + +G AMK M+K +M + RA E++IL LD
Sbjct: 57 VNEFRPIRELGHGDMGTVYLAKHVTSGNPVAMKVMNKELMQKKRSHKRARMEKEILQKLD 236
Query: 2329 HPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYL 2508
HPFLP L+ F+++ H L++ YC+GG+L L RQ + E A RFYAAEVV ALEYL
Sbjct: 237 HPFLPKLFTKFESENHSFLLMSYCSGGDLSTLRQRQKNRRFSESAARFYAAEVVLALEYL 416
Query: 2509 HCQGIIYRDLKPENILLHRDGHISLTDFDLSCL 2607
H GI+YRDLKPENILL DGHI +TDFDLS +
Sbjct: 417 HQHGILYRDLKPENILLQADGHIMITDFDLSLI 515
Score = 56.5 bits (117), Expect(3) = 4e-022
Identities = 29/69 (42%), Positives = 34/69 (49%)
Frame = -2 / -2
Query: 2600 DKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXXXSFRTFIGCLSRS 2421
++SKSV +CPS *S MFSGFKSL IP C+Y S CL
Sbjct: 508 ERSKSVIMICPSA*SNMFSGFKSLYKIPCWCKYSSASTTSAA*NLAADSENLLFFCLCLR 329
Query: 2420 IKSSPPAQ* 2394
+ SPP Q*
Sbjct: 328 VLRSPPEQ* 302
Score = 55.1 bits (114), Expect(2) = 7e-058
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1 / +2
Query: 2707 RASNSFVGTEEYIAPEIITGAGHTSAVDWWALGI 2808
RA + TEEY+APEI+ G GH AVDWWA GI
Sbjct: 734 RAVSFVCSTEEYVAPEILWGKGHGVAVDWWAFGI 835
Score = 51.0 bits (105), Expect(3) = 4e-022
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = -2 / -2
Query: 2360 NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTLLSIAFMAKYSPVPSNSTKWTLPVSPD 2181
N ++G+ GWS+ +I S AL L ++ L I FMA P+ + ++T+P+SP
Sbjct: 268 NFVKSLGKKGWSSFCKISFSIRALLWLLFFCISSLFITFMATGFPLVTCFARYTVPMSPW 89
Query: 2180 PKGLTGLKCF 2151
P L GL F
Sbjct: 88 PSSLIGLNSF 59
Score = 45.5 bits (93), Expect(3) = 4e-022
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -2 / -3
Query: 2813 RRIPSAHQSTALVWPAPVIISGAMYSSV 2730
+ IP AHQSTA WP P ISGA YSSV
Sbjct: 840 QHIPKAHQSTATPWPLPHKISGATYSSV 757
>gb|CF401310.1|CF401310 RTWW1_11_E11.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_11_E11_A015 5', mRNA sequence
Length = 783
Score = 105 bits (224), Expect(3) = 1e-057
Identities = 38/67 (56%), Positives = 49/67 (73%)
Frame = +1 / +1
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APE+I+G GH SAVDWW LG+ LYEML+G TPF+G + T NI+
Sbjct: 373 SRSFVGTHEYLAPEVISGKGHGSAVDWWTLGVFLYEMLFGRTPFKGAGKDSTLTNIITHP 552
Query: 2893 IRFPASI 2913
++FP +
Sbjct: 553 LKFPVDM 573
Score = 89.5 bits (189), Expect(3) = 1e-057
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +1 / +1
Query: 2461 AVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRP 2622
+ RFYAAEV+ ALEYLH G+IYRDLKPEN+L+ +DGHI L+DFDLS P
Sbjct: 22 SARFYAAEVLLALEYLHMMGVIYRDLKPENVLVRQDGHIMLSDFDLSFTCQVTP 183
Score = 78.0 bits (164), Expect(3) = 1e-057
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +1 / +1
Query: 2926 AARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPELEAPL 3084
AAR LI RLL +DP RLGS GA +IK+HPFF+ INWAL+R+ PP ++ L
Sbjct: 625 AARDLIKRLLVKDPRRRLGSARGAADIKKHPFFKNINWALIRSVPPPGVQQKL 783
>gb|DR684550.1|DR684550 EST1074627 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAU02 3' end, mRNA sequence
Length = 855
Score = 139 bits (298), Expect(2) = 3e-056
Identities = 56/95 (58%), Positives = 68/95 (71%)
Frame = +1 / +3
Query: 2323 LDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALE 2502
LDHPFLP L+ F+++ H L++ YC+GG+L L RQ + E A RFYAAEVV LE
Sbjct: 9 LDHPFLPKLFTKFESENHSFLLMSYCSGGDLNTLRQRQKNRRFSESAARFYAAEVVLVLE 188
Query: 2503 YLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCL 2607
YLH GI+YRDLKPENILL DGHI +TDFD S +
Sbjct: 189 YLHQHGILYRDLKPENILLQADGHIMITDFDPSLI 293
Score = 106 bits (227), Expect(2) = 3e-056
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +1 / +3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANIL 2883
S+SFVGTEEY+APEI+ G GH AVDWWA GILLYEM+YG TPF+G TR+ TF NI+
Sbjct: 519 SHSFVGTEEYVAPEILWGKGHGVAVDWWAFGILLYEMVYGKTPFKGCTRKETFYNIM 689
Score = 83.5 bits (176), Expect(2) = 5e-024
Identities = 38/56 (67%), Positives = 39/56 (69%)
Frame = -2 / -3
Query: 2879 ILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFD 2712
+L NV LV PLKGV PY ISY IP AHQSTA WP P ISGA YSSVPT E D
Sbjct: 685 ML*NVSFLVHPLKGVFPYTISYNNIPKAHQSTATPWPLPHKISGATYSSVPTNE*D 518
Score = 54.7 bits (113), Expect(2) = 5e-024
Identities = 29/67 (43%), Positives = 32/67 (47%)
Frame = -2 / -3
Query: 2594 SKSVNEMCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXXXSFRTFIGCLSRSIK 2415
SKSV +CPS *S MFSGFKSL IP C+Y S CL +
Sbjct: 280 SKSVIMICPSA*SNMFSGFKSLYKIPCWCKYSSTSTTSAA*NLAADSENLLFFCLCLRVL 101
Query: 2414 SSPPAQ* 2394
SPP Q*
Sbjct: 100 RSPPEQ* 80
>gb|DR060775.1|DR060775 RTNIT1_30_A04.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_A04_A029 3', mRNA sequence
Length = 785
Score = 133 bits (286), Expect(2) = 7e-056
Identities = 55/105 (52%), Positives = 69/105 (65%)
Frame = +1 / -1
Query: 2335 FLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYLHC 2514
F TLY F+T CL++++C GGEL L RQP K E A RFYAAEV+ +LEYLH
Sbjct: 785 FSSTLYTHFETDKFSCLVMEFCPGGELHTLRQRQPGKHFSELAARFYAAEVLLSLEYLHM 606
Query: 2515 QGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRPQVFLPHDID 2649
G++YRDLKPEN+L+ DGHI L+DFDLS + P + ID
Sbjct: 605 LGVVYRDLKPENVLVREDGHIMLSDFDLSLRCAVNPTLVKSSSID 471
Score = 111 bits (236), Expect(2) = 7e-056
Identities = 45/81 (55%), Positives = 56/81 (69%)
Frame = +1 / -1
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI L+E+++G TPF+G + T N++ +
Sbjct: 248 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELIFGKTPFKGSGNRATLFNVVGQP 69
Query: 2893 IRFPASIQVSLAARQLIYRLL 2955
+RFP S S AAR LI LL
Sbjct: 68 LRFPESPTASFAARDLIRGLL 6
Score = 71.6 bits (150), Expect(2) = 6e-023
Identities = 39/81 (48%), Positives = 45/81 (55%)
Frame = -2 / +1
Query: 2954 SNRYISCLAARLTCMLAGNLISLCRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALV 2775
S I LAA+L +GNL L V L PL GV P S R IP HQSTAL
Sbjct: 7 SKPLIKSLAAKLAVGDSGNLRGCPTTLKRVARLPDPLNGVFPKISSCRNIPKVHQSTALP 186
Query: 2774 WPAPVIISGAMYSSVPTKEFD 2712
P+P+IISGA YS VPT + +
Sbjct: 187 CPSPLIISGAKYSWVPTNDME 249
Score = 62.9 bits (131), Expect(2) = 6e-023
Identities = 33/88 (37%), Positives = 44/88 (50%)
Frame = -2 / +1
Query: 2606 KQDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXXXSFRTFIGCLS 2427
++DKSKS + +CPS ++ FSG +SL P CRY S + GC
Sbjct: 514 RKDKSKSESMICPSSLTRTFSGLRSLYTTPSICRYSKERRTSAA*NRAASSEKCLPGCRC 693
Query: 2426 RSIKSSPPAQ*STIRHICVFV*NDAYNV 2343
RS+ SSPP Q S +H + V YNV
Sbjct: 694 RSVCSSPPGQNSITKHENLSVSKCVYNV 777
>gb|CV034119.1|CV034119 RTNACL1_38_G01.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_G01_A029 5', mRNA sequence
Length = 614
Score = 219 bits (472), Expect = 1e-055
Identities = 90/169 (53%), Positives = 115/169 (68%)
Frame = +1 / +3
Query: 2077 KPHMKDTASWRAIQKVLENGESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMD 2256
KPH + W AI + + ++ L HFR ++ LG GD GSV+L EL GT YFAMK MD
Sbjct: 108 KPHKANDPRWEAILAIQKRDVTLGLSHFRLLKRLGCGDIGSVYLAELSGTRCYFAMKVMD 287
Query: 2257 KSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
K+ + +R K+ RA ER+IL LDHPFLPTLY F+T CL++++C GG+L L RQ
Sbjct: 288 KASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQ 467
Query: 2437 PMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISL 2583
P K E A RFYAAEV+ +LEYLH G++YRDLKPEN+L+ DGHI L
Sbjct: 468 PGKHFSELAARFYAAEVLLSLEYLHMLGVVYRDLKPENVLVREDGHIML 614
Score = 106 bits (227), Expect = 7e-022
Identities = 58/140 (41%), Positives = 71/140 (50%)
Frame = -2 / -2
Query: 2576 MCPSL*SKMFSGFKSL*IIPWQCRYXXXXXXXXXXXXXXXSFRTFIGCLSRSIKSSPPAQ 2397
+CPS ++ FSG +SL P CRY S + GC RS+ SPP Q
Sbjct: 607 ICPSSLTRTFSGLRSLYTTPSICRYSKERRTSAA*NRAASSEKCLPGCRCRSVCRSPPGQ 428
Query: 2396 *STIRHICVFV*NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTLLSIAFMAKYSPVPS 2217
S +H + V YNVGR G SN RI S AL FRL+ LSI F+AK VP
Sbjct: 427 NSITKHENLSVSKCVYNVGRKG*SNDCRISLSV*ALSNFFRLARDALSITFIAK*HLVPL 248
Query: 2216 NSTKWTLPVSPDPKGLTGLK 2157
NS ++TLP+SP P LK
Sbjct: 247 NSARYTLPMSPHPNLFNNLK 188
>gb|BX250464.1|BX250464 BX250464 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP037C06, mRNA sequence
Length = 620
Score = 218 bits (471), Expect = 2e-055
Identities = 92/169 (54%), Positives = 115/169 (68%)
Frame = +1 / +1
Query: 2143 IDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQILDM 2322
+ L HFR V+ LG GD GSV+L EL T YFAMK M+ ++R K+ RA ER+IL M
Sbjct: 7 LGLNHFRLVKRLGCGDIGSVYLTELDRTKCYFAMKVMENGPSVSRKKMLRAQTEREILQM 186
Query: 2323 LDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALE 2502
LDHPFLPTLY F+T CL+++YC GG+L +L RQP + E A RFYAAEV+ ALE
Sbjct: 187 LDHPFLPTLYTHFETDKFSCLVMEYCPGGDLHILRQRQPGRNFSEQAARFYAAEVLLALE 366
Query: 2503 YLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRPQVFLPHDID 2649
YLH GI+YRDLKPEN+L+ DGHI L+DFDLS + P + +D
Sbjct: 367 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSPVD 513
Score = 86.8 bits (183), Expect(2) = 1e-022
Identities = 47/96 (48%), Positives = 55/96 (57%)
Frame = -2 / -1
Query: 2438 GCLSRSIKSSPPAQ*STIRHICVFV*NDAYNVGRNGWSNISRICRSAVALWTLFRLSMTL 2259
GC RS+ SPP Q S +H + V YNVGRNG S+I I S AL FRL+
Sbjct: 302 GCRCRSMWRSPPGQYSITKHENLSVSK*VYNVGRNG*SSI*SISLSVWALSIFFRLTEGP 123
Query: 2258 LSIAFMAKYSPVPSNSTKWTLPVSPDPKGLTGLKCF 2151
SI FMAK V SNS ++TLP+SP P T LK F
Sbjct: 122 FSITFMAK*HFVRSNSVRYTLPMSPQPNRFTNLKWF 15
Score = 41.8 bits (85), Expect(2) = 1e-022
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -2 / -1
Query: 2603 QDKSKSVNEMCPSL*SKMFSGFKSL*IIPWQCRY 2502
+DKSKS + +CPS ++ FSG +SL IP CRY
Sbjct: 467 KDKSKSESIICPSSLTRTFSGLRSLYTIPSICRY 366
>gb|DR687924.1|DR687924 EST1078007 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABY22 3' end, mRNA sequence
Length = 814
Score = 192 bits (414), Expect(2) = 6e-050
Identities = 80/153 (52%), Positives = 104/153 (67%)
Frame = +1 / +1
Query: 2149 LKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQILDMLD 2328
+ FRP+R LG GD G+V+L + + +G AMK M+K +M + RA E++IL LD
Sbjct: 52 VNEFRPIRELGHGDMGTVYLAKHVTSGNPVAMKVMNKELMQKKRSHKRARMEKEILQKLD 231
Query: 2329 HPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYL 2508
HPFLP L+ F+++ H L++ YC+GG+L L RQ + E A RFYAAEVV ALEYL
Sbjct: 232 HPFLPKLFTKFESENHSFLLMSYCSGGDLNTLRQRQKNRRFSESAARFYAAEVVLALEYL 411
Query: 2509 HCQGIIYRDLKPENILLHRDGHISLTDFDLSCL 2607
H GI+YRDLKPENILL D HI +TDFDLS +
Sbjct: 412 HQHGILYRDLKPENILLQADRHIMITDFDLSLI 510
Score = 32.7 bits (65), Expect(2) = 6e-050
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1 / +2
Query: 2734 EEYIAPEIITGAGHTSAVD 2790
+EY+APEI+ G GH AVD
Sbjct: 758 KEYVAPEILWGKGHGVAVD 814
>gb|DR693421.1|DR693421 EST1083509 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADY90 3' end, mRNA sequence
Length = 771
Score = 196 bits (423), Expect = 7e-049
Identities = 81/153 (52%), Positives = 105/153 (68%)
Frame = +1 / +1
Query: 2149 LKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQILDMLD 2328
+ FRP+R LG GD G+V+L + + +G AMK M+K +M + RA E++IL LD
Sbjct: 49 VNEFRPIRELGHGDMGTVYLAKHVTSGNPVAMKVMNKELMQKKRSHKRARMEKEILQKLD 228
Query: 2329 HPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYL 2508
HPFLP L+ F+++ H L++ YC+GG+L L RQ + E A RFYAAEVV ALEYL
Sbjct: 229 HPFLPKLFTKFESENHSFLLMSYCSGGDLSTLRQRQKNRRFSESAARFYAAEVVLALEYL 408
Query: 2509 HCQGIIYRDLKPENILLHRDGHISLTDFDLSCL 2607
H GI+YRDLKPENILL DGHI +TDFDLS +
Sbjct: 409 HQHGILYRDLKPENILLQADGHIMITDFDLSLI 507
>gb|DT634529.1|DT634529 EST1149460 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG692 3' end, mRNA sequence
Length = 756
Score = 192 bits (414), Expect = 1e-047
Identities = 80/153 (52%), Positives = 104/153 (67%)
Frame = +1 / +3
Query: 2149 LKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQILDMLD 2328
+ FRP+R LG GD G+V+L + + +G AMK M+K +M + RA E++IL LD
Sbjct: 60 VNEFRPIRELGHGDMGTVYLAKHVTSGNPVAMKVMNKELMQKKRSHKRARMEKEILQKLD 239
Query: 2329 HPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYL 2508
HPFLP L+ F+++ H L++ YC+GG+L L RQ + E A RFYAAEVV ALEYL
Sbjct: 240 HPFLPKLFTKFESENHSFLLMSYCSGGDLNTLRQRQKNRRFSESAARFYAAEVVLALEYL 419
Query: 2509 HCQGIIYRDLKPENILLHRDGHISLTDFDLSCL 2607
H GI+YRDLKPENILL D HI +TDFDLS +
Sbjct: 420 HQHGILYRDLKPENILLQADRHIMITDFDLSLI 518
>gb|CF664702.1|CF664702 RTCNT1_11_A07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_11_A07_A029 5', mRNA sequence
Length = 764
Score = 85.4 bits (180), Expect(3) = 1e-047
Identities = 42/101 (41%), Positives = 55/101 (54%)
Frame = +1 / +1
Query: 2134 GESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQI 2313
GE + + F +R +G G G V V GT +AMK M K ++ N V AER I
Sbjct: 148 GEKVGPQDFELLRVVGQGAFGKVFQVRRKGTNVIYAMKVMKKDKIITGNHVDYMKAERDI 327
Query: 2314 LDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
L + HPF+ L SFQTK+ + LI+D+ GG LF L RQ
Sbjct: 328 LTKIVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFQLYRQ 450
Score = 74.4 bits (156), Expect(3) = 1e-047
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1 / +1
Query: 2446 VLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
+ E+ R Y AE+V+A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 454 LFSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 609
Score = 71.2 bits (149), Expect(3) = 1e-047
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = +1 / +1
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTP 2841
SNS GT EY+APEII GH A DWW++GILL+EML G P
Sbjct: 634 SNSMCGTTEYMAPEIILSKGHDKAADWWSVGILLFEMLTGQPP 762
>gb|DR023271.1|DR023271 STRS1_56_B12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_56_B12_A034 5', mRNA sequence
Length = 835
Score = 184 bits (397), Expect(2) = 2e-047
Identities = 76/139 (54%), Positives = 94/139 (67%)
Frame = +1 / +2
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T N++ +
Sbjct: 323 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 502
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
+RFP S VS AAR LI LL ++P +RL GA EIKQHPFF G+NWAL+R ATPPE+
Sbjct: 503 LRFPESPTVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEI 682
Query: 3073 EAPLQDTLEATLPPPAADA 3129
P+ L P A+ +
Sbjct: 683 PKPIDIDLLGKRVPVASSS 739
Score = 130 bits (279), Expect = 5e-029
Identities = 66/123 (53%), Positives = 76/123 (61%)
Frame = -2 / -2
Query: 3080 GASSSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLAG 2901
G SGGVA R RAQF P KKGCCLIS+AP + GS S I LAA+LT +G
Sbjct: 690 GFGISGGVAHRIRAQFTPSKKGCCLISVAPRLYANRCCGSFTSKPLIKSLAAKLTVGDSG 511
Query: 2900 NLISLCRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTK 2721
NL L +V L PLKGV P SYR IP+ HQSTAL P+P+IISGA YS VPT
Sbjct: 510 NLRGCPTTLNSVARLPEPLKGVFPNRSSYRNIPNVHQSTALP*PSPLIISGARYSWVPTN 331
Query: 2720 EFD 2712
+ +
Sbjct: 330 DME 322
Score = 32.2 bits (64), Expect(2) = 2e-047
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1 / +2
Query: 2551 ILLHRDGHISLTDFDLSCLTSCRPQVFLPHDID 2649
+L+ DGHI L+DFDLS P + +D
Sbjct: 2 VLVREDGHIMLSDFDLSLRCVVSPTLVKSTSVD 100
>gb|CF477770.1|CF477770 RTWW3_9_E01.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_9_E01_A022 5', mRNA sequence
Length = 668
Score = 82.6 bits (174), Expect(3) = 4e-047
Identities = 41/101 (40%), Positives = 54/101 (53%)
Frame = +1 / +3
Query: 2134 GESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQI 2313
G+ + F +R +G G G V V GT +AMK M K ++ N V AER I
Sbjct: 39 GDKFGPQDFELLRVVGQGAFGKVFQVRRKGTNVIYAMKVMKKDKIITGNHVDYMKAERDI 218
Query: 2314 LDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
L + HPF+ L SFQTK+ + LI+D+ GG LF L RQ
Sbjct: 219 LTKIVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFQLYRQ 341
Score = 74.4 bits (156), Expect(3) = 4e-047
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1 / +3
Query: 2446 VLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
+ E+ R Y AE+V+A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 345 LFSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 500
Score = 72.5 bits (152), Expect(3) = 4e-047
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +1 / +3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPF 2844
SNS GT EY+APEII GH A DWW++GILL+EML G P+
Sbjct: 525 SNSMCGTTEYMAPEIILSKGHDKAADWWSVGILLFEMLTGQPPY 656
>gb|DR119636.1|DR119636 RTMG1_24_B06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_24_B06_A029 5', mRNA sequence
Length = 688
Score = 84.0 bits (177), Expect(4) = 6e-047
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +1 / +3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
SNS GT EY+APEII GH A DWW++GILL+EML G P+ RQ+ I+ +
Sbjct: 393 SNSMCGTTEYMAPEIILSKGHDKAADWWSVGILLFEMLTGQPPYTNNNRQKLQEKIIKEK 572
Query: 2893 IRFPA 2907
I+ P+
Sbjct: 573 IKLPS 587
Score = 74.4 bits (156), Expect(4) = 6e-047
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1 / +3
Query: 2446 VLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
+ E+ R Y AE+V+A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 213 LFSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 368
Score = 64.8 bits (135), Expect(4) = 6e-047
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = +1 / +3
Query: 2236 FAMKAMDKSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGGEL 2415
+AMK M K ++ N AER IL + HPF+ L SFQTK+ + LI+D+ GG L
Sbjct: 9 YAMKVMKKDKIITGNHADYMKAERDILTKIVHPFIVQLRYSFQTKSKLYLILDFINGGHL 188
Query: 2416 FMLLDRQ 2436
F L RQ
Sbjct: 189 FFQLYRQ 209
Score = 23.5 bits (45), Expect(4) = 6e-047
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / +3
Query: 2938 LIYRLLHRDPANRLGS 2985
L+ LL +DP+ RLGS
Sbjct: 612 LLKGLLQKDPSKRLGS 659
>gb|AW290589.1|AW290589 NXNV031H03F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV031H03 5', mRNA sequence
Length = 293
Score = 189 bits (407), Expect = 1e-046
Identities = 76/97 (78%), Positives = 82/97 (84%)
Frame = +1 / +2
Query: 2230 EYFAMKAMDKSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGG 2409
E FAMKAMDK VMLNRNKVHRA ER+I+ LDHPFLPTLYASFQTKTH+CLI D+ GG
Sbjct: 2 ELFAMKAMDKEVMLNRNKVHRACIEREIMATLDHPFLPTLYASFQTKTHVCLITDFAPGG 181
Query: 2410 ELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYLHCQG 2520
ELFML+DRQPMKVL+EDA RFY A ALEYLHCQG
Sbjct: 182 ELFMLVDRQPMKVLREDAARFYVAXXXXALEYLHCQG 292
Score = 106 bits (227), Expect = 7e-022
Identities = 55/97 (56%), Positives = 63/97 (64%)
Frame = -2 / -3
Query: 2519 PWQCRYXXXXXXXXXXXXXXXSFRTFIGCLSRSIKSSPPAQ*STIRHICVFV*NDAYNVG 2340
PWQ RY S RTFIGCLS S+KSSPP S I+H CVFV* DA +VG
Sbjct: 291 PWQ*RYSKAXXXXAT*NRAASSRRTFIGCLSTSMKSSPPGAKSVIKHTCVFV*KDA*SVG 112
Query: 2339 RNGWSNISRICRSAVALWTLFRLSMTLLSIAFMAKYS 2229
R GWSN++ I S A TL R ++T LSIAF+A S
Sbjct: 111 RKGWSNVAIISLSIQARCTLLRFNITSLSIAFIANNS 1
>gb|CD027256.1|CD027256 NXNV031H03 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV031H03 5' similar to Arabidopsis thaliana sequence
At5g58140 non phototropic hypocotyl 1-like (NPL1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 293
Score = 189 bits (407), Expect = 1e-046
Identities = 76/97 (78%), Positives = 82/97 (84%)
Frame = +1 / +2
Query: 2230 EYFAMKAMDKSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAGG 2409
E FAMKAMDK VMLNRNKVHRA ER+I+ LDHPFLPTLYASFQTKTH+CLI D+ GG
Sbjct: 2 ELFAMKAMDKEVMLNRNKVHRACIEREIMATLDHPFLPTLYASFQTKTHVCLITDFAPGG 181
Query: 2410 ELFMLLDRQPMKVLKEDAVRFYAAEVVTALEYLHCQG 2520
ELFML+DRQPMKVL+EDA RFY A ALEYLHCQG
Sbjct: 182 ELFMLVDRQPMKVLREDAARFYVAXXXXALEYLHCQG 292
Score = 106 bits (227), Expect = 7e-022
Identities = 55/97 (56%), Positives = 63/97 (64%)
Frame = -2 / -3
Query: 2519 PWQCRYXXXXXXXXXXXXXXXSFRTFIGCLSRSIKSSPPAQ*STIRHICVFV*NDAYNVG 2340
PWQ RY S RTFIGCLS S+KSSPP S I+H CVFV* DA +VG
Sbjct: 291 PWQ*RYSKAXXXXAT*NRAASSRRTFIGCLSTSMKSSPPGAKSVIKHTCVFV*KDA*SVG 112
Query: 2339 RNGWSNISRICRSAVALWTLFRLSMTLLSIAFMAKYS 2229
R GWSN++ I S A TL R ++T LSIAF+A S
Sbjct: 111 RKGWSNVAIISLSIQARCTLLRFNITSLSIAFIANNS 1
>gb|DR088977.1|DR088977 RTAL1_5_G05.g1_A029 Roots plus added aluminum Pinus taeda cDNA clone
RTAL1_5_G05_A029 5', mRNA sequence
Length = 853
Score = 182 bits (393), Expect = 9e-045
Identities = 72/134 (53%), Positives = 93/134 (69%)
Frame = +1 / +2
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
SNSFVGT EY+APEI+ G GH SAVDWW GI LYE+L+G TPF+G + T N++ +
Sbjct: 170 SNSFVGTHEYLAPEIVKGEGHGSAVDWWTYGIFLYELLFGKTPFKGASNTATLNNVVGQP 349
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
++FP + VS AA+ LI LL ++P +RL GA EIKQHPFF G+NWAL+R +TPPE+
Sbjct: 350 LKFPETPVVSYAAKDLIRGLLVKEPQHRLAFKRGATEIKQHPFFEGLNWALIRCSTPPEV 529
Query: 3073 EAPLQDTLEATLPP 3114
PL+ T P
Sbjct: 530 PKPLETTFPVQTLP 571
Score = 133 bits (285), Expect = 7e-030
Identities = 65/124 (52%), Positives = 76/124 (61%)
Frame = -2 / -2
Query: 3083 RGASSSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLA 2904
+G +SGGV R RAQF P KKGCCLIS+AP + GS S I LAA LT ++
Sbjct: 540 KGFGTSGGVEQRIRAQFKPSKKGCCLISVAPRLNANRCCGSFTSKPLIKSLAA*LTTGVS 361
Query: 2903 GNLISLCRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPT 2724
GNL L +V L+ PL GV P SY+ IP HQSTAL P+P+ ISGA YS VPT
Sbjct: 360 GNLRGCPTTLLSVAVLLAPLNGVFPNRSSYKNIP*VHQSTALP*PSPLTISGAKYSCVPT 181
Query: 2723 KEFD 2712
EFD
Sbjct: 180 NEFD 169
>gb|CO166677.1|CO166677 FLD1_63_E10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_63_E10_A029 5', mRNA sequence
Length = 882
Score = 180 bits (387), Expect = 6e-044
Identities = 71/124 (57%), Positives = 89/124 (71%)
Frame = +1 / -2
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI LYE+LYG TPF+G + + T N++ +
Sbjct: 677 SMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTPFKGASNRETLENVVGQP 498
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
++FP S VS AAR LI LL +DP +R+G GA EIKQHPFF NWAL+R+ TPP++
Sbjct: 497 LKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPFFDSANWALIRSTTPPQI 318
Query: 3073 EAPL 3084
P+
Sbjct: 317 PKPV 306
Score = 129 bits (276), Expect = 1e-028
Identities = 61/118 (51%), Positives = 73/118 (61%)
Frame = -2 / +1
Query: 3065 GGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLAGNLISL 2886
GGV R RAQF K GCCLIS+AP +P L GS S I AA+LT +GN
Sbjct: 325 GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGESGNFNGC 504
Query: 2885 CRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFD 2712
+NV L+ PL GV P + SY++IP+ HQSTAL WP P+IISGA YS VPT + D
Sbjct: 505 PTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VPTNDMD 678
>gb|DR163514.1|DR163514 RTFE1_43_H03.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_43_H03_A029 3', mRNA sequence
Length = 774
Score = 180 bits (387), Expect = 6e-044
Identities = 71/124 (57%), Positives = 89/124 (71%)
Frame = +1 / +3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI LYE+LYG TPF+G + + T N++ +
Sbjct: 90 SMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTPFKGASNRETLENVVGQP 269
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
++FP S VS AAR LI LL +DP +R+G GA EIKQHPFF NWAL+R+ TPP++
Sbjct: 270 LKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPFFDSANWALIRSTTPPQI 449
Query: 3073 EAPL 3084
P+
Sbjct: 450 PKPV 461
Score = 129 bits (276), Expect = 1e-028
Identities = 61/118 (51%), Positives = 73/118 (61%)
Frame = -2 / -3
Query: 3065 GGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLAGNLISL 2886
GGV R RAQF K GCCLIS+AP +P L GS S I AA+LT +GN
Sbjct: 442 GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGESGNFNGC 263
Query: 2885 CRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFD 2712
+NV L+ PL GV P + SY++IP+ HQSTAL WP P+IISGA YS VPT + D
Sbjct: 262 PTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VPTNDMD 89
>gb|DR163606.1|DR163606 RTFE1_43_H03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_43_H03_A029 5', mRNA sequence
Length = 871
Score = 180 bits (387), Expect = 6e-044
Identities = 71/124 (57%), Positives = 89/124 (71%)
Frame = +1 / +2
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI LYE+LYG TPF+G + + T N++ +
Sbjct: 227 SMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTPFKGASNRETLENVVGQP 406
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
++FP S VS AAR LI LL +DP +R+G GA EIKQHPFF NWAL+R+ TPP++
Sbjct: 407 LKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPFFDSANWALIRSTTPPQI 586
Query: 3073 EAPL 3084
P+
Sbjct: 587 PKPV 598
Score = 129 bits (276), Expect = 1e-028
Identities = 61/118 (51%), Positives = 73/118 (61%)
Frame = -2 / -2
Query: 3065 GGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLAGNLISL 2886
GGV R RAQF K GCCLIS+AP +P L GS S I AA+LT +GN
Sbjct: 579 GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGESGNFNGC 400
Query: 2885 CRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFD 2712
+NV L+ PL GV P + SY++IP+ HQSTAL WP P+IISGA YS VPT + D
Sbjct: 399 PTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VPTNDMD 226
>gb|CX652350.1|CX652350 COLD1_58_B10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_B10_A029 5', mRNA sequence
Length = 781
Score = 177 bits (382), Expect = 3e-043
Identities = 70/124 (56%), Positives = 88/124 (70%)
Frame = +1 / -1
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI LYE+LYG TPF+G + + T N++ +
Sbjct: 589 SMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTPFKGASNRETLENVVGQP 410
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
++FP S VS AAR LI LL +DP +R+G GA E KQHPFF NWAL+R+ TPP++
Sbjct: 409 LKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATETKQHPFFDSANWALIRSTTPPQI 230
Query: 3073 EAPL 3084
P+
Sbjct: 229 PKPV 218
Score = 128 bits (275), Expect = 2e-028
Identities = 60/118 (50%), Positives = 73/118 (61%)
Frame = -2 / +3
Query: 3065 GGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLAGNLISL 2886
GGV R RAQF K GCCL+S+AP +P L GS S I AA+LT +GN
Sbjct: 237 GGVVLRIRAQFALSKNGCCLVSVAPLLKPILCCGSFTSKPLIKSRAAKLTVGESGNFNGC 416
Query: 2885 CRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFD 2712
+NV L+ PL GV P + SY++IP+ HQSTAL WP P+IISGA YS VPT + D
Sbjct: 417 PTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VPTNDMD 590
>gb|DR095991.1|DR095991 STRR1_25_B08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_25_B08_A033 3', mRNA sequence
Length = 843
Score = 177 bits (382), Expect = 3e-043
Identities = 70/124 (56%), Positives = 88/124 (70%)
Frame = +1 / +3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI LYE+LYG TPF+G + + T N++ +
Sbjct: 270 SMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTTPFKGASNRETLENVVGQP 449
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
++FP VS AAR LI LL +DP +R+G GA EIKQHPFF NWAL+R+ TPP++
Sbjct: 450 LKFPDCPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPFFDSANWALIRSTTPPQI 629
Query: 3073 EAPL 3084
P+
Sbjct: 630 PKPV 641
Score = 129 bits (277), Expect = 9e-029
Identities = 61/118 (51%), Positives = 73/118 (61%)
Frame = -2 / -3
Query: 3065 GGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLAGNLISL 2886
GGV R RAQF K GCCLIS+AP +P L GS S I AA+LT +GN
Sbjct: 622 GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGQSGNFNGC 443
Query: 2885 CRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFD 2712
+NV L+ PL GV P + SY++IP+ HQSTAL WP P+IISGA YS VPT + D
Sbjct: 442 PTTFSNVSRLLAPLNGVVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VPTNDMD 269
>gb|DR047931.1|DR047931 RTBOR1_5_C10.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_5_C10_A029 5', mRNA sequence
Length = 787
Score = 177 bits (381), Expect = 4e-043
Identities = 70/124 (56%), Positives = 88/124 (70%)
Frame = +1 / -1
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI LYE+LYG PF+G + + T N++ +
Sbjct: 565 SMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLYGTIPFKGASNRETLENVVGQP 386
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
++FP S VS AAR LI LL +DP +R+G GA EIKQHPFF NWAL+R+ TPP++
Sbjct: 385 LKFPDSPTVSFAARDLIRGLLVKDPQHRIGFKRGATEIKQHPFFDSANWALIRSTTPPQI 206
Query: 3073 EAPL 3084
P+
Sbjct: 205 PKPV 194
Score = 128 bits (275), Expect = 2e-028
Identities = 60/118 (50%), Positives = 73/118 (61%)
Frame = -2 / +3
Query: 3065 GGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLAGNLISL 2886
GGV R RAQF K GCCLIS+AP +P L GS S I AA+LT +GN
Sbjct: 213 GGVVLRIRAQFALSKNGCCLISVAPLLKPILCCGSFTSKPLIKSRAAKLTVGESGNFNGC 392
Query: 2885 CRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPTKEFD 2712
+NV L+ PL G+ P + SY++IP+ HQSTAL WP P+IISGA YS VPT + D
Sbjct: 393 PTTFSNVSRLLAPLNGIVP*SSSYKKIPNVHQSTALPWPCPLIISGAKYS*VPTNDMD 566
>gb|DR018738.1|DR018738 STRS1_25_H09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_25_H09_A034 3', mRNA sequence
Length = 838
Score = 177 bits (380), Expect = 6e-043
Identities = 72/140 (51%), Positives = 92/140 (65%)
Frame = +1 / +2
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI L+E+++G TPF+G + T N++ +
Sbjct: 32 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELIFGKTPFKGSGNRATLFNVVGQP 211
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
+RFP S S AAR LI LL ++P +RL GA EIKQHPFF G+NWAL+R TPP++
Sbjct: 212 LRFPESPTASFAARDLIRGLLVKEPQHRLAVKRGATEIKQHPFFEGVNWALIRCTTPPDI 391
Query: 3073 EAPLQDTLEATLPPPAADAA 3132
P + L A A A+
Sbjct: 392 PKPFEIELPAKKVATATTAS 451
Score = 119 bits (254), Expect = 1e-025
Identities = 62/124 (50%), Positives = 70/124 (56%)
Frame = -2 / -2
Query: 3083 RGASSSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLA 2904
+G SGGV R RAQF P KKGCCLIS+AP GS S I LAA+L +
Sbjct: 402 KGFGMSGGVVQRIRAQFTPSKKGCCLISVAPRLTAKRC*GSFTSKPLIKSLAAKLAVGDS 223
Query: 2903 GNLISLCRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPT 2724
GNL L V L PL GV P S R IP HQSTAL P+P+IISGA YS VPT
Sbjct: 222 GNLRGCPTTLKRVARLPDPLNGVFPKISSCRNIPKVHQSTALPCPSPLIISGAKYSWVPT 43
Query: 2723 KEFD 2712
+ +
Sbjct: 42 NDME 31
>gb|DR060851.1|DR060851 RTNIT1_30_A04.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_A04_A029 5', mRNA sequence
Length = 730
Score = 177 bits (380), Expect = 6e-043
Identities = 72/140 (51%), Positives = 92/140 (65%)
Frame = +1 / -1
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI L+E+++G TPF+G + T N++ +
Sbjct: 598 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELIFGKTPFKGSGNRATLFNVVGQP 419
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPEL 3072
+RFP S S AAR LI LL ++P +RL GA EIKQHPFF G+NWAL+R TPP++
Sbjct: 418 LRFPESPTASFAARDLIRGLLVKEPQHRLAVKRGATEIKQHPFFEGVNWALIRCTTPPDI 239
Query: 3073 EAPLQDTLEATLPPPAADAA 3132
P + L A A A+
Sbjct: 238 PKPFEIELPAKKVATATTAS 179
Score = 119 bits (254), Expect = 1e-025
Identities = 62/124 (50%), Positives = 70/124 (56%)
Frame = -2 / +3
Query: 3083 RGASSSGGVAARTRAQFMPRKKGCCLISIAPS*EPSLFAGSRCSNRYISCLAARLTCMLA 2904
+G SGGV R RAQF P KKGCCLIS+AP GS S I LAA+L +
Sbjct: 228 KGFGMSGGVVQRIRAQFTPSKKGCCLISVAPRLTAKRC*GSFTSKPLIKSLAAKLAVGDS 407
Query: 2903 GNLISLCRILANVLCLVFPLKGV*PYNISYRRIPSAHQSTALVWPAPVIISGAMYSSVPT 2724
GNL L V L PL GV P S R IP HQSTAL P+P+IISGA YS VPT
Sbjct: 408 GNLRGCPTTLKRVARLPDPLNGVFPKISSCRNIPKVHQSTALPCPSPLIISGAKYSWVPT 587
Query: 2723 KEFD 2712
+ +
Sbjct: 588 NDME 599
>gb|CO196899.1|CO196899 GEO1_2_A08.g1_A029 Root gravitropism April 2003 test Pinus taeda cDNA
clone GEO1_2_A08_A029 5', mRNA sequence
Length = 730
Score = 111 bits (238), Expect(3) = 2e-039
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +1 / +3
Query: 2695 AEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFA 2874
+ P S S VGTEEY+APE++ G GH AVDWWALG+LLYEMLYG TPF+G TR+ TF
Sbjct: 357 SSPPTRSYSLVGTEEYVAPEMLKGMGHDFAVDWWALGVLLYEMLYGKTPFKGATRKETFY 536
Query: 2875 NILHKDIRF 2901
NIL K +F
Sbjct: 537 NILMKQPQF 563
Score = 73.0 bits (153), Expect(3) = 2e-039
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1 / +3
Query: 2473 YAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCR 2619
Y+AE+V L +LH GI YRDLKPENIL+ GHI LTDFDLS S +
Sbjct: 3 YSAEIVIVLGHLHSHGIAYRDLKPENILVQASGHIMLTDFDLSTRLSLK 149
Score = 26.3 bits (51), Expect(3) = 2e-039
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 3004 IKQHPFFRGINWALVRAATPP 3066
IK H FF+ +NW ++ + P
Sbjct: 645 IKNHSFFKELNWDTIQYISRP 707
>gb|CO164524.1|CO164524 FLD1_48_D01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_D01_A029 5', mRNA sequence
Length = 837
Score = 72.5 bits (152), Expect(3) = 2e-038
Identities = 33/93 (35%), Positives = 52/93 (55%)
Frame = +1 / +2
Query: 2158 FRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQILDMLDHPF 2337
F P+ +G G G V L T + +AMK + KS ML+R +V +ER +L +D
Sbjct: 11 FEPLTIIGRGAFGEVRLCRAKSTQQIYAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRC 190
Query: 2338 LPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
+ L+ SFQ ++ LI++Y GG++ LL R+
Sbjct: 191 IVKLFYSFQDTEYLYLIMEYLPGGDIMTLLIRE 289
Score = 71.6 bits (150), Expect(3) = 2e-038
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +1 / +2
Query: 2443 KVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDL 2598
++L ED RFY AE + A+ +H I+RD+KP+N+LL +DGH+ LTDF L
Sbjct: 290 EILSEDVARFYIAESILAIHSIHKHNYIHRDIKPDNLLLDKDGHMKLTDFGL 445
Score = 64.3 bits (134), Expect(3) = 2e-038
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +1 / +2
Query: 2719 SFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILH 2886
S VGT +Y+APE++ G+ DWW+LG ++YEML GY PF + T I++
Sbjct: 632 STVGTPDYMAPEVLLKKGYGMECDWWSLGAIMYEMLMGYPPFYSDDPRITCRKIIN 799
>gb|CF393824.1|CF393824 RTDS2_1_H10.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_H10_A021 5', mRNA sequence
Length = 694
Score = 74.8 bits (157), Expect(3) = 1e-037
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +1 / +1
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPF 2844
+N+F GT EY++PE++ G G+T VDWW LGILLYEML G P+
Sbjct: 415 TNTFAGTPEYLSPELLIGDGYTRTVDWWTLGILLYEMLSGLPPY 546
Score = 66.1 bits (138), Expect(3) = 1e-037
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +1 / +1
Query: 2455 EDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDL 2598
E+ +FY AE++ AL++LH +IYRDL PENIL+ GHI L DF L
Sbjct: 241 EERAKFYTAELLCALDHLHSFNVIYRDLNPENILIDYTGHILLCDFGL 384
Score = 56.5 bits (117), Expect(3) = 1e-037
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +1 / +1
Query: 2227 GEYFAMKAMDKSVMLNRNKVHRATAERQILDMLDHPFLPTLYASFQTKTHICLIVDYCAG 2406
G +A+K + K+ +++R++V AER +L ++ PF+ L SFQ+ + L++ Y G
Sbjct: 19 GRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVESPFIVPLKFSFQSAEKLYLVLSYVNG 198
Query: 2407 GELFMLLDRQ 2436
GELF L +
Sbjct: 199 GELFHHLQNE 228
>gb|CF394944.1|CF394944 RTDS2_8_H03.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_H03_A021 5', mRNA sequence
Length = 668
Score = 84.0 bits (177), Expect(4) = 1e-036
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +1 / +2
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
SNS GT EY+APEII GH A DWW++GILL+EML G P+ RQ+ I+ +
Sbjct: 242 SNSMCGTTEYMAPEIILSKGHDKAADWWSVGILLFEMLTGQPPYTNNNRQKLQEKIIKEK 421
Query: 2893 IRFPA 2907
I+ P+
Sbjct: 422 IKLPS 436
Score = 74.4 bits (156), Expect(4) = 1e-036
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1 / +2
Query: 2446 VLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
+ E+ R Y AE+V+A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 62 LFSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 217
Score = 29.5 bits (58), Expect(4) = 1e-036
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 2992 GAMEIKQHPFFRGINWALVRA 3054
G+ EIK+H +F+ INW + A
Sbjct: 518 GSDEIKRHKWFKAINWRKLEA 580
Score = 23.5 bits (45), Expect(4) = 1e-036
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / +2
Query: 2938 LIYRLLHRDPANRLGS 2985
L+ LL +DP+ RLGS
Sbjct: 461 LLKGLLQKDPSKRLGS 508
>gb|DR387555.1|DR387555 RTHG1_22_D06.g2_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_22_D06_A029 5', mRNA sequence
Length = 598
Score = 81.7 bits (172), Expect(3) = 2e-036
Identities = 38/100 (38%), Positives = 55/100 (55%)
Frame = +1 / +2
Query: 2137 ESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQIL 2316
++I + F ++ +G G G V V+ GT E +AMK M K ++ +N AER I+
Sbjct: 68 QNIGVDDFELLKVVGEGAFGKVFQVKRNGTSEIYAMKVMRKDRIMEKNHAEYIKAERDIM 247
Query: 2317 DMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
+ HPF+ L SFQTK + L+ D+ GG LF L RQ
Sbjct: 248 TRIVHPFIVQLRYSFQTKHKLYLVSDFINGGHLFFQLQRQ 367
Score = 81.3 bits (171), Expect(3) = 2e-036
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +1 / +2
Query: 2434 QPMKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
Q + ED R YAAE+++A+ YLH GI++RDLKPENILL +GH+ LTDF L+
Sbjct: 359 QRQGLFSEDLARVYAAEIISAVSYLHQNGIVHRDLKPENILLDSEGHVKLTDFGLA 526
Score = 30.4 bits (60), Expect(3) = 2e-036
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 2713 SNSFVGTEEYIAPEII 2760
SNS GT EY+APEII
Sbjct: 551 SNSMCGTTEYMAPEII 598
>gb|DR014997.1|DR014997 HEAT1_52_H03.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_H03_A029 5', mRNA sequence
Length = 851
Score = 81.3 bits (171), Expect(4) = 8e-036
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = +1 / -3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
SN GT EY+APEII GH A DWW++GILL+EML G P+ RQ+ I+ +
Sbjct: 660 SNFMCGTTEYMAPEIILSKGHDKAADWWSVGILLFEMLTGQPPYTNNNRQKLQEKIIKEK 481
Query: 2893 IRFPA 2907
I+ P+
Sbjct: 480 IKLPS 466
Score = 74.4 bits (156), Expect(4) = 8e-036
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1 / -3
Query: 2446 VLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
+ E+ R Y AE+V+A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 840 LFSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 685
Score = 29.5 bits (58), Expect(4) = 8e-036
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / -3
Query: 2992 GAMEIKQHPFFRGINWALVRA 3054
G+ EIK+H +F+ INW + A
Sbjct: 384 GSDEIKRHKWFKAINWRKLEA 322
Score = 23.5 bits (45), Expect(4) = 8e-036
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / -3
Query: 2938 LIYRLLHRDPANRLGS 2985
L+ LL +DP+ RLGS
Sbjct: 441 LLKGLLQKDPSKRLGS 394
>gb|CO362980.1|CO362980 RTK1_6_H11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_6_H11_A029 5', mRNA sequence
Length = 842
Score = 84.0 bits (177), Expect(3) = 4e-035
Identities = 42/101 (41%), Positives = 54/101 (53%)
Frame = +1 / +1
Query: 2134 GESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQI 2313
GE + F +R +G G G V V GT +AMK M K ++ N V AER I
Sbjct: 295 GEKFGPQDFELLRVVGQGAFGKVFQVRRKGTNVIYAMKVMKKDKIITGNHVDYMKAERDI 474
Query: 2314 LDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
L + HPF+ L SFQTK+ + LI+D+ GG LF L RQ
Sbjct: 475 LTKIVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFQLYRQ 597
Score = 74.4 bits (156), Expect(3) = 4e-035
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1 / +1
Query: 2446 VLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
+ E+ R Y AE+V+A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 601 LFSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 756
Score = 30.4 bits (60), Expect(3) = 4e-035
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 2713 SNSFVGTEEYIAPEII 2760
SNS GT EY+APEII
Sbjct: 781 SNSMCGTTEYMAPEII 828
>gb|DR014911.1|DR014911 HEAT1_52_H03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_H03_A029 3', mRNA sequence
Length = 883
Score = 84.0 bits (177), Expect(3) = 6e-035
Identities = 42/101 (41%), Positives = 54/101 (53%)
Frame = +1 / -3
Query: 2134 GESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQI 2313
GE + F +R +G G G V V GT +AMK M K ++ N V AER I
Sbjct: 554 GEKFGPQDFELLRVVGQGAFGKVFQVRRKGTNVIYAMKVMKKDKIITGNHVDYMKAERDI 375
Query: 2314 LDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
L + HPF+ L SFQTK+ + LI+D+ GG LF L RQ
Sbjct: 374 LTKIVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFQLYRQ 252
Score = 74.4 bits (156), Expect(3) = 6e-035
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1 / -3
Query: 2446 VLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
+ E+ R Y AE+V+A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 248 LFSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 93
Score = 29.9 bits (59), Expect(3) = 6e-035
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / -3
Query: 2713 SNSFVGTEEYIAPEIITGAGH 2775
SN GT EY+APE I GH
Sbjct: 68 SNFMCGTTEYMAPENILSKGH 6
>gb|DR162414.1|DR162414 RTFE1_17_D12.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_17_D12_A029 5', mRNA sequence
Length = 655
Score = 85.4 bits (180), Expect(3) = 6e-035
Identities = 42/101 (41%), Positives = 55/101 (54%)
Frame = +1 / -2
Query: 2134 GESIDLKHFRPVRPLGSGDTGSVHLVELLGTGEYFAMKAMDKSVMLNRNKVHRATAERQI 2313
GE + + F +R +G G G V V GT +AMK M K ++ N V AER I
Sbjct: 531 GEKVGPQDFELLRVVGQGAFGKVFQVRRKGTNVIYAMKVMKKDKIITGNHVDYMKAERDI 352
Query: 2314 LDMLDHPFLPTLYASFQTKTHICLIVDYCAGGELFMLLDRQ 2436
L + HPF+ L SFQTK+ + LI+D+ GG LF L RQ
Sbjct: 351 LTKIVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFQLYRQ 229
Score = 74.4 bits (156), Expect(3) = 6e-035
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1 / -2
Query: 2446 VLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
+ E+ R Y AE+V+A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 225 LFSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 70
Score = 28.6 bits (56), Expect(3) = 6e-035
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / -2
Query: 2713 SNSFVGTEEYIAPEI 2757
SNS GT EY+APEI
Sbjct: 45 SNSMCGTTEYMAPEI 1
>gb|BX255099.1|BX255099 BX255099 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP110G11, mRNA sequence
Length = 505
Score = 149 bits (320), Expect = 1e-034
Identities = 60/109 (55%), Positives = 75/109 (68%)
Frame = +1 / +3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
S SFVGT EY+APEII G GH SAVDWW GI L+E+++G TPF+G + T N++ +
Sbjct: 177 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELIFGKTPFKGSGNRATLFNVVGQP 356
Query: 2893 IRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINW 3039
+RFP S S AAR LI LL ++P +RL GA IKQHPFF G+NW
Sbjct: 357 LRFPESPTASFAARDLIRGLLVKEPQHRLAVKRGAN*IKQHPFFEGVNW 503
>gb|DR058919.1|DR058919 RTNIT1_14_E01.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_14_E01_A029 5', mRNA sequence
Length = 587
Score = 92.7 bits (196), Expect(2) = 2e-034
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = +1 / +2
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANI 2880
S SFVGT EY+APEII G GH SAVDWW GI LYE+L+G TPF+G + T N+
Sbjct: 419 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNV 586
Score = 80.3 bits (169), Expect(2) = 2e-034
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = +1 / +2
Query: 2458 DAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRPQVFLP 2637
D+ + AEV+ ALEYLH G++YRDLKPEN+L+ DGHI L+DFDLS P +
Sbjct: 5 DSSSVFVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLVKS 184
Query: 2638 HDID 2649
+D
Sbjct: 185 TSVD 196
>gb|CO165495.1|CO165495 FLD1_54_H08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_54_H08_A029 5', mRNA sequence
Length = 864
Score = 143 bits (307), Expect(2) = 2e-034
Identities = 56/114 (49%), Positives = 79/114 (69%)
Frame = +1 / +3
Query: 1588 LATTLERIEKNFVITDPRLPDNPIIFASDSFLRLTEYCREEILGRNCRFLQGPETDRGTV 1767
L+ L RI ++FV+ DP LPD PI+ AS+ FL+LT Y R+E+LGRNCRFLQG +TD+ V
Sbjct: 414 LSIALNRIHQSFVLADPHLPDMPIVHASNLFLQLTGYSRDEVLGRNCRFLQGRDTDKAAV 593
Query: 1768 KKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGT 1929
+I+ +I + TV+++NY K FWNL H P+R+ G V +++GV LD T
Sbjct: 594 AQIQQSIVAEHCCTVRILNYRKDNSSFWNLLHTAPVRNASGKVAFYVGVHLDVT 755
Score = 136 bits (291), Expect = 1e-030
Identities = 55/145 (37%), Positives = 89/145 (61%)
Frame = +1 / +3
Query: 685 TSESGNSIDEXXXXXXXXXXLPRVSEELRAALSAFQQTFVVSDATRPDHPILYASAGFFN 864
+ +G ++ + + +S L AL+ Q+FV++D PD PI++AS F
Sbjct: 333 SKRTGKTVSDKRSNSADLIRVAPISSSLSIALNRIHQSFVLADPHLPDMPIVHASNLFLQ 512
Query: 865 MTGYSSNEVVGRNCRFLQGSGTDPVEISKIRQALAAGSNYCGRILNYKKDGTPFWNLLTV 1044
+TGYS +EV+GRNCRFLQG TD +++I+Q++ A RILNY+KD + FWNLL
Sbjct: 513 LTGYSRDEVLGRNCRFLQGRDTDKAAVAQIQQSIVAEHCCTVRILNYRKDNSSFWNLLHT 692
Query: 1045 APIKDEDGRVLKFIGMQVEVSKYTE 1119
AP+++ G+V ++G+ ++V+ E
Sbjct: 693 APVRNASGKVAFYVGVHLDVTGIDE 767
Score = 24.9 bits (48), Expect(2) = 2e-034
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 1923 WN*ACSRGCCKRW 1961
W+ CS GCC R+
Sbjct: 812 WSCRCSSGCCPRF 850
>gb|CO165413.1|CO165413 FLD1_54_H08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_54_H08_A029 3', mRNA sequence
Length = 812
Score = 143 bits (307), Expect(2) = 2e-034
Identities = 56/114 (49%), Positives = 79/114 (69%)
Frame = +1 / +3
Query: 1588 LATTLERIEKNFVITDPRLPDNPIIFASDSFLRLTEYCREEILGRNCRFLQGPETDRGTV 1767
L+ L RI ++FV+ DP LPD PI+ AS+ FL+LT Y R+E+LGRNCRFLQG +TD+ V
Sbjct: 222 LSIALNRIHQSFVLADPHLPDMPIVHASNLFLQLTGYSRDEVLGRNCRFLQGRDTDKAAV 401
Query: 1768 KKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGT 1929
+I+ +I + TV+++NY K FWNL H P+R+ G V +++GV LD T
Sbjct: 402 AQIQQSIVAEHCCTVRILNYRKDNSSFWNLLHTAPVRNASGKVAFYVGVHLDVT 563
Score = 136 bits (291), Expect = 1e-030
Identities = 55/145 (37%), Positives = 89/145 (61%)
Frame = +1 / +3
Query: 685 TSESGNSIDEXXXXXXXXXXLPRVSEELRAALSAFQQTFVVSDATRPDHPILYASAGFFN 864
+ +G ++ + + +S L AL+ Q+FV++D PD PI++AS F
Sbjct: 141 SKRTGKTVSDKRSNSADLIRVAPISSSLSIALNRIHQSFVLADPHLPDMPIVHASNLFLQ 320
Query: 865 MTGYSSNEVVGRNCRFLQGSGTDPVEISKIRQALAAGSNYCGRILNYKKDGTPFWNLLTV 1044
+TGYS +EV+GRNCRFLQG TD +++I+Q++ A RILNY+KD + FWNLL
Sbjct: 321 LTGYSRDEVLGRNCRFLQGRDTDKAAVAQIQQSIVAEHCCTVRILNYRKDNSSFWNLLHT 500
Query: 1045 APIKDEDGRVLKFIGMQVEVSKYTE 1119
AP+++ G+V ++G+ ++V+ E
Sbjct: 501 APVRNASGKVAFYVGVHLDVTGIDE 575
Score = 24.9 bits (48), Expect(2) = 2e-034
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 1923 WN*ACSRGCCKRW 1961
W+ CS GCC R+
Sbjct: 620 WSCRCSSGCCPRF 658
>gb|DR088892.1|DR088892 RTAL1_5_G05.b1_A029 Roots plus added aluminum Pinus taeda cDNA clone
RTAL1_5_G05_A029 3', mRNA sequence
Length = 762
Score = 148 bits (317), Expect = 3e-034
Identities = 58/115 (50%), Positives = 77/115 (66%)
Frame = +1 / +3
Query: 2770 GHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAARQLIYR 2949
GH SAVDWW GI LYE+L+G TPF+G + T N++ + ++FP + VS AA+ LI
Sbjct: 3 GHGSAVDWWTYGIFLYELLFGKTPFKGASNTATLNNVVGQPLKFPETPVVSYAAKDLIRG 182
Query: 2950 LLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPPELEAPLQDTLEATLPP 3114
LL ++P +RL GA EIKQHPFF G+NWAL+R +TPPE+ PL+ T P
Sbjct: 183 LLVKEPQHRLAFKRGATEIKQHPFFEGLNWALIRCSTPPEVPKPLETTFPVQTLP 347
>gb|DR098431.1|DR098431 STRR1_45_A08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_45_A08_A033 5', mRNA sequence
Length = 504
Score = 84.0 bits (177), Expect(3) = 4e-034
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +1 / +1
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
SNS GT EY+APEII GH A DWW++GILL+EML G P+ RQ+ I+ +
Sbjct: 238 SNSMCGTTEYMAPEIILSKGHDKAADWWSVGILLFEMLTGQPPYTNNNRQKLQEKIMKEK 417
Query: 2893 IRFPA 2907
I+ P+
Sbjct: 418 IKLPS 432
Score = 74.4 bits (156), Expect(3) = 4e-034
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1 / +1
Query: 2446 VLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
+ E+ R Y AE+V+A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 58 LFSEELARVYTAEIVSAVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 213
Score = 27.2 bits (53), Expect(3) = 4e-034
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 2938 LIYRLLHRDPANRLGS 2985
L+ LLH+DP+ RLGS
Sbjct: 457 LLKGLLHKDPSKRLGS 504
>gb|DR057984.1|DR057984 RTNIT1_9_A09.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_9_A09_A029 3', mRNA sequence
Length = 801
Score = 84.0 bits (177), Expect(4) = 6e-032
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +1 / +1
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKD 2892
SNS GT EY+APEII GH A DWW++GILL+EML G P+ RQ+ I+ +
Sbjct: 133 SNSMCGTTEYMAPEIILSKGHDKAADWWSVGILLFEMLTGQPPYTNNNRQKLQEKIIKEK 312
Query: 2893 IRFPA 2907
I+ P+
Sbjct: 313 IKLPS 327
Score = 58.3 bits (121), Expect(4) = 6e-032
Identities = 22/36 (61%), Positives = 29/36 (80%)
Frame = +1 / +1
Query: 2494 ALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLS 2601
A+ +LH GII+RDLKPENIL+ +GH+ LTDF L+
Sbjct: 1 AVSHLHKNGIIHRDLKPENILMDAEGHVMLTDFGLA 108
Score = 29.5 bits (58), Expect(4) = 6e-032
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 2992 GAMEIKQHPFFRGINWALVRA 3054
G+ EIK+H +F+ INW + A
Sbjct: 409 GSDEIKRHKWFKAINWRKLEA 471
Score = 23.5 bits (45), Expect(4) = 6e-032
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 2938 LIYRLLHRDPANRLGS 2985
L+ LL +DP+ RLGS
Sbjct: 352 LLKGLLQKDPSKRLGS 399
>gb|DR049315.1|DR049315 RTBOR1_15_H05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_15_H05_A029 3', mRNA sequence
Length = 675
Score = 106 bits (227), Expect(2) = 2e-031
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = +1 / +3
Query: 2713 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTFANIL 2883
SNSFVGTEEY+APEI++G+GH + DWW+LGILLYEMLYG TPFRG ++ T+ IL
Sbjct: 93 SNSFVGTEEYVAPEIVSGSGHEFSADWWSLGILLYEMLYGKTPFRGSDKRETYRRIL 263
Score = 51.9 bits (107), Expect(2) = 2e-031
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1 / +3
Query: 2938 LIYRLLHRDPANRLGSYEGAMEIKQHPFFRGINWALVRAATPP 3066
LI RLL +DP RLGS G+ ++K H FF G+ W + P
Sbjct: 309 LILRLLEKDPRRRLGSRNGSSDVKDHGFFAGLRWDFIETLCRP 437
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,813,168,226
Number of Sequences: 355925
Number of extensions: 28320339
Number of successful extensions: 130751
Number of sequences better than 1.0e-020: 135
length of database: 72,425,745
effective HSP length: 56
effective length of database: 52,493,945
effective search space used: 55276124085
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)