TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3536697.2.1
(651 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF479544.1|CF479544 RTWW3_22_G10.g1_A022 Well-watered lo... 255 2e-067
gb|DR056998.1|DR056998 RTNIT1_1_H09.g1_A029 Roots minus nit... 255 2e-067
gb|DR079740.1|DR079740 RTFEPL1_17_F12.b1_A029 Roots plus ad... 255 2e-067
gb|DR092788.1|DR092788 STRR1_4_A12.b1_A033 Stem Response Re... 255 2e-067
gb|DR092855.1|DR092855 STRR1_4_A12.g1_A033 Stem Response Re... 255 2e-067
gb|DR100307.1|DR100307 STRR1_63_E02.b1_A033 Stem Response R... 255 2e-067
gb|DR384279.1|DR384279 RTHG1_1_E12.b1_A029 Roots plus added... 255 2e-067
gb|DR682085.1|DR682085 EST1072160 Normalized pine embryo li... 255 2e-067
gb|BX254051.1|BX254051 BX254051 Pinus pinaster differenciat... 248 2e-065
gb|AW888189.1|AW888189 NXNV_105_F12_F Nsf Xylem Normal wood... 245 2e-064
gb|BM492654.1|BM492654 NXRV_029_B09_F NXRV (Nsf Xylem Root ... 245 3e-064
gb|BQ654839.1|BQ654839 NXRV086_D03_F NXRV (Nsf Xylem Root w... 237 4e-062
gb|CO367783.1|CO367783 RTK1_36_C12.g1_A029 Roots minus pota... 237 4e-062
gb|DR081469.1|DR081469 RTFEPL1_29_G11.g1_A029 Roots plus ad... 237 4e-062
gb|DR684166.1|DR684166 EST1074243 Normalized pine embryo li... 237 4e-062
gb|BE496383.1|BE496383 NXCI_017_A02_F NXCI (Nsf Xylem Compr... 228 3e-059
gb|DR023386.1|DR023386 STRS1_57_F01.b1_A034 Shoot tip pitch... 224 6e-058
gb|DR092087.1|DR092087 RTAL1_26_E11.b1_A029 Roots plus adde... 214 6e-055
gb|AW758792.1|AW758792 NXNV_089_G04_F Nsf Xylem Normal wood... 208 3e-053
gb|DR072584.1|DR072584 RTDK1_27_F10.b1_A029 Roots, dark Pin... 202 2e-051
gb|DR691657.1|DR691657 EST1081744 Normalized pine embryo li... 202 2e-051
gb|BX255353.1|BX255353 BX255353 Pinus pinaster differenciat... 193 1e-048
gb|BX253086.1|BX253086 BX253086 Pinus pinaster differenciat... 191 4e-048
gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciat... 191 4e-048
gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus pota... 191 4e-048
gb|CV036240.1|CV036240 RTNACL1_57_F03.g1_A029 Roots plus ad... 191 4e-048
gb|CX646741.1|CX646741 COLD1_11_E12.b1_A029 Root cold Pinus... 191 4e-048
gb|CX646821.1|CX646821 COLD1_11_E12.g1_A029 Root cold Pinus... 191 4e-048
gb|CX648143.1|CX648143 COLD1_26_G01.g1_A029 Root cold Pinus... 191 4e-048
gb|CX650015.1|CX650015 COLD1_43_A08.b1_A029 Root cold Pinus... 191 4e-048
gb|DR048632.1|DR048632 RTBOR1_10_E05.b1_A029 Roots plus add... 191 4e-048
gb|DR071320.1|DR071320 RTDK1_19_C12.b1_A029 Roots, dark Pin... 191 4e-048
gb|DR688096.1|DR688096 EST1078180 Normalized pine embryo li... 191 4e-048
gb|DR060989.1|DR060989 RTNIT1_31_H03.b1_A029 Roots minus ni... 190 9e-048
gb|DR081398.1|DR081398 RTFEPL1_29_G11.b1_A029 Roots plus ad... 187 8e-047
gb|CO365130.1|CO365130 RTK1_23_G05.g1_A029 Roots minus pota... 186 1e-046
gb|CV033876.1|CV033876 RTNACL1_37_D08.b1_A029 Roots plus ad... 186 2e-046
gb|DR055465.1|DR055465 RTCA1_23_G10.g2_A029 Roots minus cal... 186 2e-046
gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus... 185 2e-046
gb|BG526951.1|BG526951 NXPV_057_G05_F NXPV (Nsf Xylem Plani... 183 1e-045
gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pin... 183 1e-045
gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus ni... 182 1e-045
gb|CO365042.1|CO365042 RTK1_23_G05.b1_A029 Roots minus pota... 182 2e-045
gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine r... 182 3e-045
gb|CF479423.1|CF479423 RTWW3_22_G10.b1_A022 Well-watered lo... 182 3e-045
gb|DR682084.1|DR682084 EST1072159 Normalized pine embryo li... 182 3e-045
gb|AI813092.1|AI813092 20F12 Pine Lambda Zap Xylem library ... 181 4e-045
gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pin... 180 1e-044
gb|CV036174.1|CV036174 RTNACL1_57_F03.b1_A029 Roots plus ad... 176 2e-043
gb|DR049907.1|DR049907 RTBOR1_19_H03.g1_A029 Roots plus add... 110 5e-043
gb|BF777810.1|BF777810 NXSI_075_H12_F NXSI (Nsf Xylem Side ... 174 6e-043
gb|CX652950.1|CX652950 COLD1_62_B04.g1_A029 Root cold Pinus... 169 1e-041
gb|CO169434.1|CO169434 NDL1_7_B11.b1_A029 Needles control P... 105 1e-040
gb|BE643911.1|BE643911 NXCI_048_H08_F NXCI (Nsf Xylem Compr... 165 4e-040
gb|BE644028.1|BE644028 NXCI_053_G03_F NXCI (Nsf Xylem Compr... 161 4e-039
gb|DT634473.1|DT634473 EST1149404 Normalized pine embryo li... 156 1e-037
gb|CV032286.1|CV032286 RTNACL1_7_D03.b1_A029 Roots plus add... 155 4e-037
gb|CX646066.1|CX646066 COLD1_7_C08.b1_A029 Root cold Pinus ... 155 4e-037
gb|DR069646.1|DR069646 RTDK1_8_C04.g1_A029 Roots, dark Pinu... 155 4e-037
gb|DR022670.1|DR022670 STRS1_52_E04.g1_A034 Shoot tip pitch... 150 9e-036
gb|DR022522.1|DR022522 STRS1_51_E04.g1_A034 Shoot tip pitch... 146 1e-034
gb|DT631983.1|DT631983 EST1146914 Normalized pine embryo li... 146 1e-034
gb|BF186163.1|BF186163 NXCI_133_G06_F NXCI (Nsf Xylem Compr... 145 3e-034
gb|AW758946.1|AW758946 NXNV_095_F06_F Nsf Xylem Normal wood... 144 8e-034
gb|DR022603.1|DR022603 STRS1_52_E04.b1_A034 Shoot tip pitch... 139 1e-032
gb|BX252587.1|BX252587 BX252587 Pinus pinaster differenciat... 137 7e-032
gb|BE049813.1|BE049813 NXNV_144_E12_F Nsf Xylem Normal wood... 137 7e-032
gb|CO166181.1|CO166181 FLD1_59_H09.g1_A029 Root flooded Pin... 137 7e-032
gb|DR048707.1|DR048707 RTBOR1_10_E05.g1_A029 Roots plus add... 133 2e-030
gb|DR684272.1|DR684272 EST1074349 Normalized pine embryo li... 132 2e-030
gb|CO367722.1|CO367722 RTK1_36_C12.b1_A029 Roots minus pota... 131 6e-030
gb|DR385918.1|DR385918 RTHG1_11_D11.g1_A029 Roots plus adde... 89 2e-029
gb|BQ697805.1|BQ697805 NXPV_061_A10_F NXPV (Nsf Xylem Plani... 123 9e-028
gb|AW784129.1|AW784129 NXNV_103_E03_F Nsf Xylem Normal wood... 122 2e-027
gb|BE241113.1|BE241113 NXNV_173_A08_F Nsf Xylem Normal wood... 121 4e-027
gb|BG275186.1|BG275186 NXSI_140_H02_F NXSI (Nsf Xylem Side ... 121 6e-027
gb|CO158653.1|CO158653 FLD1_8_G04.b1_A029 Root flooded Pinu... 120 8e-027
gb|BQ696619.1|BQ696619 NXPV_043_C09_F NXPV (Nsf Xylem Plani... 120 1e-026
gb|DR118566.1|DR118566 RTMG1_17_G05.g1_A029 Roots minus mag... 117 6e-026
gb|BQ696029.1|BQ696029 NXPV_035_F01_F NXPV (Nsf Xylem Plani... 114 5e-025
gb|BQ698583.1|BQ698583 NXPV_071_F08_F NXPV (Nsf Xylem Plani... 114 5e-025
gb|BX255109.1|BX255109 BX255109 Pinus pinaster differenciat... 113 1e-024
gb|DR094453.1|DR094453 STRR1_14_E02.g1_A033 Stem Response R... 111 4e-024
gb|AW758685.1|AW758685 NXNV_085_C06_F Nsf Xylem Normal wood... 111 5e-024
gb|BF610263.1|BF610263 NXSI_057_B05_F NXSI (Nsf Xylem Side ... 111 5e-024
gb|BF010807.1|BF010807 NXCI_095_A03_F NXCI (Nsf Xylem Compr... 111 7e-024
gb|DR022458.1|DR022458 STRS1_51_E04.b1_A034 Shoot tip pitch... 110 9e-024
gb|BM427736.1|BM427736 NXRV_002_E07_F NXRV (Nsf Xylem Root ... 109 2e-023
gb|BE049816.1|BE049816 NXNV_144_F06_F Nsf Xylem Normal wood... 109 2e-023
gb|BG275851.1|BG275851 NXSI_148_F04_F NXSI (Nsf Xylem Side ... 108 3e-023
gb|BI202802.1|BI202802 NXPV_090_F11_F NXPV (Nsf Xylem Plani... 108 3e-023
gb|CO168704.1|CO168704 NDL1_2_A02.b1_A029 Needles control P... 107 8e-023
gb|BQ700846.1|BQ700846 NXRV112_B12_F NXRV (Nsf Xylem Root w... 105 4e-022
gb|BF518118.1|BF518118 NXSI_035_C02_F NXSI (Nsf Xylem Side ... 103 1e-021
gb|BQ696316.1|BQ696316 NXPV_037_H09_F NXPV (Nsf Xylem Plani... 102 3e-021
gb|BF010728.1|BF010728 NXCI_066_G06_F NXCI (Nsf Xylem Compr... 101 5e-021
gb|BM133194.1|BM133194 NXLV_001_D11_F NXLV (Nsf Xylem Late ... 100 1e-020
>gb|CF479544.1|CF479544 RTWW3_22_G10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_22_G10_A022 5', mRNA sequence
Length = 716
Score = 255 bits (552), Expect = 2e-067
Identities = 101/123 (82%), Positives = 116/123 (94%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 284 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 463
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 464 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFG 643
Query: 366 DQE 374
D++
Sbjct: 644 DEK 652
Score = 179 bits (385), Expect = 2e-044
Identities = 82/121 (67%), Positives = 94/121 (77%)
Frame = -3 / -3
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 645 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 466
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS A*A
Sbjct: 465 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 286
Query: 7 T 5
T
Sbjct: 285 T 283
Score = 103 bits (219), Expect = 1e-021
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = -2 / -2
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
L+ ++T E+ DH GK L+ G+ G PA+ +F +++R LV II V +EL++ + + +
Sbjct: 649 LISKNTTTEILDHQGKTLS*GHFGFPAK*IFCFSNIRFPLVWIIFCVWSELNLCISIYCL 470
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L +L H +F R+ ++E N+ H+ H+ F+QI + L+ P L I+IDCQRLL Q L
Sbjct: 469 LHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSL 290
Query: 11 SN 6
SN
Sbjct: 289 SN 284
>gb|DR056998.1|DR056998 RTNIT1_1_H09.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_H09_A029 5', mRNA sequence
Length = 786
Score = 255 bits (552), Expect = 2e-067
Identities = 101/123 (82%), Positives = 116/123 (94%)
Frame = +3 / -2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 677 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 498
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 497 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFG 318
Query: 366 DQE 374
D++
Sbjct: 317 DEK 309
Score = 179 bits (385), Expect = 2e-044
Identities = 82/121 (67%), Positives = 94/121 (77%)
Frame = -3 / +1
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 316 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 495
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS A*A
Sbjct: 496 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 675
Query: 7 T 5
T
Sbjct: 676 T 678
Score = 103 bits (219), Expect = 1e-021
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = -2 / +3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
L+ ++T E+ DH GK L+ G+ G PA+ +F +++R LV II V +EL++ + + +
Sbjct: 312 LISKNTTTEILDHQGKTLS*GHFGFPAK*IFCFSNIRFPLVWIIFCVWSELNLCISIYCL 491
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L +L H +F R+ ++E N+ H+ H+ F+QI + L+ P L I+IDCQRLL Q L
Sbjct: 492 LHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSL 671
Query: 11 SN 6
SN
Sbjct: 672 SN 677
>gb|DR079740.1|DR079740 RTFEPL1_17_F12.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_17_F12_A029 3', mRNA sequence
Length = 784
Score = 255 bits (552), Expect = 2e-067
Identities = 101/123 (82%), Positives = 116/123 (94%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 6 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 185
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 186 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFG 365
Query: 366 DQE 374
D++
Sbjct: 366 DEK 374
Score = 179 bits (385), Expect = 2e-044
Identities = 82/121 (67%), Positives = 94/121 (77%)
Frame = -3 / -1
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 367 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 188
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS A*A
Sbjct: 187 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 8
Query: 7 T 5
T
Sbjct: 7 T 5
Score = 103 bits (219), Expect = 1e-021
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = -2 / -3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
L+ ++T E+ DH GK L+ G+ G PA+ +F +++R LV II V +EL++ + + +
Sbjct: 371 LISKNTTTEILDHQGKTLS*GHFGFPAK*IFCFSNIRFPLVWIIFCVWSELNLCISIYCL 192
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L +L H +F R+ ++E N+ H+ H+ F+QI + L+ P L I+IDCQRLL Q L
Sbjct: 191 LHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSL 12
Query: 11 SN 6
SN
Sbjct: 11 SN 6
>gb|DR092788.1|DR092788 STRR1_4_A12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A12_A033 3', mRNA sequence
Length = 898
Score = 255 bits (552), Expect = 2e-067
Identities = 101/123 (82%), Positives = 116/123 (94%)
Frame = +3 / -3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 653 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 474
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 473 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFG 294
Query: 366 DQE 374
D++
Sbjct: 293 DEK 285
Score = 179 bits (385), Expect = 2e-044
Identities = 82/121 (67%), Positives = 94/121 (77%)
Frame = -3 / +1
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 292 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 471
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS A*A
Sbjct: 472 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 651
Query: 7 T 5
T
Sbjct: 652 T 654
Score = 103 bits (219), Expect = 1e-021
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = -2 / +3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
L+ ++T E+ DH GK L+ G+ G PA+ +F +++R LV II V +EL++ + + +
Sbjct: 288 LISKNTTTEILDHQGKTLS*GHFGFPAK*IFCFSNIRFPLVWIIFCVWSELNLCISIYCL 467
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L +L H +F R+ ++E N+ H+ H+ F+QI + L+ P L I+IDCQRLL Q L
Sbjct: 468 LHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSL 647
Query: 11 SN 6
SN
Sbjct: 648 SN 653
>gb|DR092855.1|DR092855 STRR1_4_A12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A12_A033 5', mRNA sequence
Length = 885
Score = 255 bits (552), Expect = 2e-067
Identities = 101/123 (82%), Positives = 116/123 (94%)
Frame = +3 / -3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 736 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 557
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 556 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFG 377
Query: 366 DQE 374
D++
Sbjct: 376 DEK 368
Score = 179 bits (385), Expect = 2e-044
Identities = 82/121 (67%), Positives = 94/121 (77%)
Frame = -3 / +3
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 375 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 554
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS A*A
Sbjct: 555 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 734
Query: 7 T 5
T
Sbjct: 735 T 737
Score = 103 bits (219), Expect = 1e-021
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = -2 / +2
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
L+ ++T E+ DH GK L+ G+ G PA+ +F +++R LV II V +EL++ + + +
Sbjct: 371 LISKNTTTEILDHQGKTLS*GHFGFPAK*IFCFSNIRFPLVWIIFCVWSELNLCISIYCL 550
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L +L H +F R+ ++E N+ H+ H+ F+QI + L+ P L I+IDCQRLL Q L
Sbjct: 551 LHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSL 730
Query: 11 SN 6
SN
Sbjct: 731 SN 736
>gb|DR100307.1|DR100307 STRR1_63_E02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_63_E02_A033 3', mRNA sequence
Length = 830
Score = 255 bits (552), Expect = 2e-067
Identities = 101/123 (82%), Positives = 116/123 (94%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 178 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 357
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 358 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFG 537
Query: 366 DQE 374
D++
Sbjct: 538 DEK 546
Score = 179 bits (385), Expect = 2e-044
Identities = 82/121 (67%), Positives = 94/121 (77%)
Frame = -3 / -1
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 539 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 360
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS A*A
Sbjct: 359 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 180
Query: 7 T 5
T
Sbjct: 179 T 177
Score = 103 bits (219), Expect = 1e-021
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = -2 / -3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
L+ ++T E+ DH GK L+ G+ G PA+ +F +++R LV II V +EL++ + + +
Sbjct: 543 LISKNTTTEILDHQGKTLS*GHFGFPAK*IFCFSNIRFPLVWIIFCVWSELNLCISIYCL 364
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L +L H +F R+ ++E N+ H+ H+ F+QI + L+ P L I+IDCQRLL Q L
Sbjct: 363 LHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSL 184
Query: 11 SN 6
SN
Sbjct: 183 SN 178
>gb|DR384279.1|DR384279 RTHG1_1_E12.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_E12_A029 3', mRNA sequence
Length = 749
Score = 255 bits (552), Expect = 2e-067
Identities = 101/123 (82%), Positives = 116/123 (94%)
Frame = +3 / -3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 639 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 460
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 459 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFG 280
Query: 366 DQE 374
D++
Sbjct: 279 DEK 271
Score = 179 bits (385), Expect = 2e-044
Identities = 82/121 (67%), Positives = 94/121 (77%)
Frame = -3 / +2
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 278 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 457
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS A*A
Sbjct: 458 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 637
Query: 7 T 5
T
Sbjct: 638 T 640
Score = 103 bits (219), Expect = 1e-021
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = -2 / +1
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
L+ ++T E+ DH GK L+ G+ G PA+ +F +++R LV II V +EL++ + + +
Sbjct: 274 LISKNTTTEILDHQGKTLS*GHFGFPAK*IFCFSNIRFPLVWIIFCVWSELNLCISIYCL 453
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L +L H +F R+ ++E N+ H+ H+ F+QI + L+ P L I+IDCQRLL Q L
Sbjct: 454 LHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSL 633
Query: 11 SN 6
SN
Sbjct: 634 SN 639
>gb|DR682085.1|DR682085 EST1072160 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA651 3' end, mRNA sequence
Length = 797
Score = 255 bits (552), Expect = 2e-067
Identities = 101/123 (82%), Positives = 116/123 (94%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 241 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 420
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FG
Sbjct: 421 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFG 600
Query: 366 DQE 374
D++
Sbjct: 601 DEK 609
Score = 179 bits (385), Expect = 2e-044
Identities = 82/121 (67%), Positives = 94/121 (77%)
Frame = -3 / -1
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 602 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 423
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS A*A
Sbjct: 422 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 243
Query: 7 T 5
T
Sbjct: 242 T 240
Score = 103 bits (219), Expect = 1e-021
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = -2 / -3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
L+ ++T E+ DH GK L+ G+ G PA+ +F +++R LV II V +EL++ + + +
Sbjct: 606 LISKNTTTEILDHQGKTLS*GHFGFPAK*IFCFSNIRFPLVWIIFCVWSELNLCISIYCL 427
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L +L H +F R+ ++E N+ H+ H+ F+QI + L+ P L I+IDCQRLL Q L
Sbjct: 426 LHNLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSL 247
Query: 11 SN 6
SN
Sbjct: 246 SN 241
>gb|BX254051.1|BX254051 BX254051 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092F08 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 692
Score = 248 bits (537), Expect = 2e-065
Identities = 99/119 (83%), Positives = 112/119 (94%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 315 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 494
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIF 362
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+F
Sbjct: 495 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVF 671
Score = 171 bits (368), Expect = 4e-042
Identities = 79/119 (66%), Positives = 91/119 (76%)
Frame = -3 / -2
Query: 361 KIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTT 182
K R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+TT
Sbjct: 670 KTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSFTT 491
Query: 181 LASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
ASS+++NSPG PRL GP CSPS+S I PST+SET KL VC PSP*TVKGS A*AT
Sbjct: 490 CASSNIVNSPGFPRLKGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*AT 314
Score = 108 bits (230), Expect = 4e-023
Identities = 50/119 (42%), Positives = 77/119 (64%)
Frame = -2 / -1
Query: 362 EDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGVLDH 183
++T EV DH GK L+ G+ G PA+ +F +++R LV II V +EL++ + + +L +
Sbjct: 671 KNTTTEVLDHQGKTLS*GHFGFPAK*IFCFSNIRFPLVWIIFCVWSELNLCISIYCLLHN 492
Query: 182 LSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLSN 6
L H +F R+ ++ER N+ P H+ H+ F+QI + L+ P L I+IDCQRLL Q LSN
Sbjct: 491 LC*F*HCKFPRIPKIERTNMFPLHKSHKAFNQIRNELETPCLFPISIDCQRLLAQSLSN 315
>gb|AW888189.1|AW888189 NXNV_105_F12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_105_F12 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 480
Score = 245 bits (530), Expect = 2e-064
Identities = 97/121 (80%), Positives = 111/121 (91%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VA LRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LM+GEH+GPFNLGNPGEF+MLELA+V
Sbjct: 2 VAXXLRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMDGEHVGPFNLGNPGEFTMLELAQV 181
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV FR+R+FG
Sbjct: 182 VKETIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVXXFRRRVFG 361
Query: 366 D 368
D
Sbjct: 362 D 364
Score = 175 bits (377), Expect = 2e-043
Identities = 80/121 (66%), Positives = 92/121 (76%)
Frame = -3 / -1
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RK T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 363 SPKTRRRKXSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 184
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS *A
Sbjct: 183 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKX*A 4
Query: 7 T 5
T
Sbjct: 3 T 1
>gb|BM492654.1|BM492654 NXRV_029_B09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_029_B09 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 627
Score = 245 bits (529), Expect = 3e-064
Identities = 97/122 (79%), Positives = 111/122 (90%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+
Sbjct: 95 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQX 274
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFG 365
V++TID A IEFRPNT DDPHKRKP ++AK+LLGWEPKV R+GLP MV DFR+R+FG
Sbjct: 275 VKETIDTNAKIEFRPNTEDDPHKRKPXXTKAKDLLGWEPKVSXRKGLPLMVEDFRRRVFG 454
Query: 366 DQ 371
D+
Sbjct: 455 DE 460
Score = 173 bits (372), Expect = 1e-042
Identities = 80/121 (66%), Positives = 91/121 (75%)
Frame = -3 / -1
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP TLGSQP SFA + SG LCGSS+VFG NS+ A S+VS+
Sbjct: 456 SPKTRRRKSSTIRGRPFLXDTLGSQPSRSFALVXSGFLLCGSSSVFGLNSIFALVSIVSF 277
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
T ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS A*A
Sbjct: 276 TXCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*A 97
Query: 7 T 5
T
Sbjct: 96 T 94
Score = 100 bits (214), Expect = 7e-021
Identities = 48/122 (39%), Positives = 74/122 (60%)
Frame = -2 / -3
Query: 371 LVPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGV 192
L+ ++T E+ DH GK L+ G+ G PA+ +F + R LV II V +EL++ + + +
Sbjct: 460 LISKNTTTEILDHQGKTLSXGHFGFPAK*IFCFSXXRFPLVWIIFCVWSELNLCISIYCL 281
Query: 191 LDHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRL 12
L L H +F R+ ++E N+ H+ H+ F+QI + L+ P L I+IDCQRLL Q L
Sbjct: 280 LHXLC*F*HCKFPRIPKIEWTNMFALHKSHKAFNQIGNELETPCLFPISIDCQRLLAQSL 101
Query: 11 SN 6
SN
Sbjct: 100 SN 95
>gb|BQ654839.1|BQ654839 NXRV086_D03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV086_D03 5' similar to Arabidopsis thaliana
sequence At3g62830 dTDP-glucose 4-6-dehydratase homolog
D18 see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 694
Score = 237 bits (513), Expect = 4e-062
Identities = 94/119 (78%), Positives = 109/119 (91%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLV+GL++LME H+GPFNLGNPGEF+MLELA+V
Sbjct: 16 VAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQV 195
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIF 362
V++TID A IEF+ NTADDPHKRKPDI++AK+LL WEP++ LREGLP MV DFRKR+F
Sbjct: 196 VKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 372
Score = 158 bits (339), Expect = 4e-038
Identities = 79/119 (66%), Positives = 90/119 (75%)
Frame = -3 / -3
Query: 361 KIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTT 182
K RLRKS T+ G PS + LGS R SFA ++SG L GSSAVF NS+ A S+VS+TT
Sbjct: 371 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 192
Query: 181 LASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
ASS+++NSPGLPRL GP S+S ISPSTKSETY*KL VCLPSP*TVKGS SA*AT
Sbjct: 191 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*AT 15
Score = 101 bits (215), Expect = 5e-021
Identities = 47/121 (38%), Positives = 74/121 (61%)
Frame = -2 / -2
Query: 368 VPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGVL 189
V ++TFA++ DH K+ + N P +++FR ++ L + II V E + +
Sbjct: 378 VVKNTFAKIFDHQRKSFPQRNSWFPLQKIFRLCNIWLPFMGIISCVFFEFNPCTRIYCFF 199
Query: 188 DHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLS 9
+LS+L H E SR+A++ER N++ FH+ +Q +QI +ILKAP L +TI+CQR Q LS
Sbjct: 198 HNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVTINCQRFFAQCLS 19
Query: 8 N 6
N
Sbjct: 18 N 16
>gb|CO367783.1|CO367783 RTK1_36_C12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_C12_A029 5', mRNA sequence
Length = 792
Score = 237 bits (513), Expect = 4e-062
Identities = 94/119 (78%), Positives = 109/119 (91%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLV+GL++LME H+GPFNLGNPGEF+MLELA+V
Sbjct: 275 VAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQV 454
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIF 362
V++TID A IEF+ NTADDPHKRKPDI++AK+LL WEP++ LREGLP MV DFRKR+F
Sbjct: 455 VKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 631
Score = 158 bits (339), Expect = 4e-038
Identities = 79/119 (66%), Positives = 90/119 (75%)
Frame = -3 / -1
Query: 361 KIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTT 182
K RLRKS T+ G PS + LGS R SFA ++SG L GSSAVF NS+ A S+VS+TT
Sbjct: 630 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 451
Query: 181 LASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
ASS+++NSPGLPRL GP S+S ISPSTKSETY*KL VCLPSP*TVKGS SA*AT
Sbjct: 450 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*AT 274
Score = 100 bits (214), Expect = 7e-021
Identities = 46/121 (38%), Positives = 74/121 (61%)
Frame = -2 / -3
Query: 368 VPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGVL 189
V ++TFA++ DH K+ + N P +++FR ++ L + II + E + +
Sbjct: 637 VVKNTFAKIFDHQRKSFPQRNSWFPLQKIFRLCNIWLPFMGIISCIFFEFNPCTRIYCFF 458
Query: 188 DHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLS 9
+LS+L H E SR+A++ER N++ FH+ +Q +QI +ILKAP L +TI+CQR Q LS
Sbjct: 457 HNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVTINCQRFFAQCLS 278
Query: 8 N 6
N
Sbjct: 277 N 275
>gb|DR081469.1|DR081469 RTFEPL1_29_G11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_G11_A029 5', mRNA sequence
Length = 667
Score = 237 bits (513), Expect = 4e-062
Identities = 94/119 (78%), Positives = 109/119 (91%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLV+GL++LME H+GPFNLGNPGEF+MLELA+V
Sbjct: 53 VAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQV 232
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIF 362
V++TID A IEF+ NTADDPHKRKPDI++AK+LL WEP++ LREGLP MV DFRKR+F
Sbjct: 233 VKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 409
Score = 158 bits (339), Expect = 4e-038
Identities = 79/119 (66%), Positives = 90/119 (75%)
Frame = -3 / -2
Query: 361 KIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTT 182
K RLRKS T+ G PS + LGS R SFA ++SG L GSSAVF NS+ A S+VS+TT
Sbjct: 408 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 229
Query: 181 LASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
ASS+++NSPGLPRL GP S+S ISPSTKSETY*KL VCLPSP*TVKGS SA*AT
Sbjct: 228 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*AT 52
Score = 100 bits (214), Expect = 7e-021
Identities = 46/121 (38%), Positives = 74/121 (61%)
Frame = -2 / -1
Query: 368 VPEDTFAEVSDHAGKALTEGNLGLPAEELFRAADVRLALVRIICGVRTELDVRLWVDGVL 189
V ++TFA++ DH K+ + N P +++FR ++ L + II + E + +
Sbjct: 415 VVKNTFAKIFDHQRKSFPQRNSWFPLQKIFRLCNIWLPFMGIISCIFFEFNPCTRIYCFF 236
Query: 188 DHLSQLQHAEFSRVAEVERPNVLPFHELHQPFHQI*DILKAPSLLAITIDCQRLLPQRLS 9
+LS+L H E SR+A++ER N++ FH+ +Q +QI +ILKAP L +TI+CQR Q LS
Sbjct: 235 HNLSKL*HRELSRIAKIERSNMVVFHQSNQSINQIRNILKAPCLFTVTINCQRFFAQCLS 56
Query: 8 N 6
N
Sbjct: 55 N 53
>gb|DR684166.1|DR684166 EST1074243 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAP61 3' end, mRNA sequence
Length = 736
Score = 237 bits (513), Expect = 4e-062
Identities = 94/119 (78%), Positives = 109/119 (91%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLV+GL++LME H+GPFNLGNPGEF+MLELA+V
Sbjct: 356 VAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQV 535
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIF 362
V++TID A IEF+ NTADDPHKRKPDI++AK+LL WEP++ LREGLP MV DFRKR+F
Sbjct: 536 VKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 712
Score = 158 bits (339), Expect = 4e-038
Identities = 79/119 (66%), Positives = 90/119 (75%)
Frame = -3 / -2
Query: 361 KIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTT 182
K RLRKS T+ G PS + LGS R SFA ++SG L GSSAVF NS+ A S+VS+TT
Sbjct: 711 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 532
Query: 181 LASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
ASS+++NSPGLPRL GP S+S ISPSTKSETY*KL VCLPSP*TVKGS SA*AT
Sbjct: 531 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*AT 355
>gb|BE496383.1|BE496383 NXCI_017_A02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_017_A02 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 567
Score = 228 bits (492), Expect = 3e-059
Identities = 91/119 (76%), Positives = 106/119 (89%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQYVSDLV+GL++LME H+GPFNLGNPGEF+MLELA+V
Sbjct: 131 VAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQV 310
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIF 362
V++TID A IEF+ NTADDPHKRKPDI++AK+LL WEP++ LRE MV DFRKR+F
Sbjct: 311 VKETIDSSARIEFKENTADDPHKRKPDITKAKDLLKWEPRISLREXXXLMVEDFRKRVF 487
Score = 150 bits (323), Expect = 7e-036
Identities = 77/119 (64%), Positives = 88/119 (73%)
Frame = -3 / -1
Query: 361 KIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTT 182
K RLRKS T+ S + LGS R SFA ++SG L GSSAVF NS+ A S+VS+TT
Sbjct: 486 KTRLRKSSTINXXXSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 307
Query: 181 LASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
ASS+++NSPGLPRL GP S+S ISPSTKSETY*KL VCLPSP*TVKGS SA*AT
Sbjct: 306 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY*KLRVCLPSP*TVKGSLRSA*AT 130
>gb|DR023386.1|DR023386 STRS1_57_F01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_57_F01_A034 3', mRNA sequence
Length = 812
Score = 224 bits (483), Expect = 6e-058
Identities = 87/109 (79%), Positives = 102/109 (93%)
Frame = +3 / +2
Query: 48 DGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFR 227
DGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+VV++TID A IEFR
Sbjct: 2 DGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFR 181
Query: 228 PNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
PNT DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FGD++
Sbjct: 182 PNTEDDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDEK 328
Score = 159 bits (341), Expect = 2e-038
Identities = 71/107 (66%), Positives = 83/107 (77%)
Frame = -3 / -3
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 321 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 142
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPS 47
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL VC PS
Sbjct: 141 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRVCFPS 1
>gb|DR092087.1|DR092087 RTAL1_26_E11.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_26_E11_A029 3', mRNA sequence
Length = 598
Score = 214 bits (461), Expect = 6e-055
Identities = 83/105 (79%), Positives = 98/105 (93%)
Frame = +3 / +2
Query: 60 TRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTA 239
TRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+VV++TID A IEFRPNT
Sbjct: 2 TRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTE 181
Query: 240 DDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
DDPHKRKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FGD++
Sbjct: 182 DDPHKRKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDEK 316
Score = 149 bits (321), Expect = 1e-035
Identities = 68/103 (66%), Positives = 80/103 (77%)
Frame = -3 / -2
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 309 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 130
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLV 59
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET KL V
Sbjct: 129 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSETNWKLRV 1
>gb|AW758792.1|AW758792 NXNV_089_G04_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_089_G04 5' similar to Arabidopsis thaliana
sequence At2g47650 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 306
Score = 208 bits (449), Expect = 3e-053
Identities = 83/102 (81%), Positives = 93/102 (91%)
Frame = +3 / +1
Query: 21 RKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTI 200
RKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+VV++TI
Sbjct: 1 RKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETI 180
Query: 201 DPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGL 326
D A IEFRPNT DDPHK KPDI++AK+LLGWEPKV L L
Sbjct: 181 DTNAKIEFRPNTEDDPHKXKPDITKAKDLLGWEPKVSLXXXL 306
Score = 149 bits (320), Expect = 2e-035
Identities = 67/100 (67%), Positives = 78/100 (78%)
Frame = -3 / -2
Query: 325 RPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGL 146
R R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+TT ASS+++NSPG
Sbjct: 305 RXXXRDTLGSQPSRSFALVISGXXLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGF 126
Query: 145 PRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGS 26
PRLNGP CSPS+S I PST+SET KL VC PSP*TVKGS
Sbjct: 125 PRLNGPTCSPSISRIRPSTRSETNWKLRVCFPSP*TVKGS 6
>gb|DR072584.1|DR072584 RTDK1_27_F10.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_27_F10_A029 3', mRNA sequence
Length = 586
Score = 202 bits (436), Expect = 2e-051
Identities = 78/100 (78%), Positives = 93/100 (93%)
Frame = +3 / +3
Query: 75 YVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHK 254
+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+VV++TID A IEFRPNT DDPHK
Sbjct: 3 FVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHK 182
Query: 255 RKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
RKPDI++AK+LLGWEPKV LR+GLP MV DFR+R+FGD++
Sbjct: 183 RKPDITKAKDLLGWEPKVSLRKGLPLMVEDFRRRVFGDEK 302
Score = 147 bits (316), Expect = 6e-035
Identities = 65/97 (67%), Positives = 77/97 (79%)
Frame = -3 / -1
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 295 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 116
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSET 77
TT ASS+++NSPG PRLNGP CSPS+S I PST+SET
Sbjct: 115 TTCASSNIVNSPGFPRLNGPTCSPSISRIRPSTRSET 5
>gb|DR691657.1|DR691657 EST1081744 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADB24 3' end, mRNA sequence
Length = 831
Score = 202 bits (435), Expect = 2e-051
Identities = 81/96 (84%), Positives = 91/96 (94%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 544 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 723
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLG 293
V++ ID A IEFRPNT DDPHKRKPDI++AK+LLG
Sbjct: 724 VKEAIDTNAKIEFRPNTEDDPHKRKPDITKAKDLLG 831
Score = 139 bits (298), Expect = 2e-032
Identities = 63/96 (65%), Positives = 74/96 (77%)
Frame = -3 / -2
Query: 292 PRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCSPS 113
P SFA ++SG LCGSS+VFG NS+ A S+ S+TT ASS+++NSPG PRLNGP CSPS
Sbjct: 830 PSRSFALVISGFLLCGSSSVFGLNSIFALVSIASFTTCASSNIVNSPGFPRLNGPTCSPS 651
Query: 112 MSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
+S I PST+SET KL VC PSP*TVKGS A*AT
Sbjct: 650 ISRIRPSTRSETNWKLRVCFPSP*TVKGSLRKA*AT 543
>gb|BX255353.1|BX255353 BX255353 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP004G08 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 495
Score = 193 bits (415), Expect = 1e-048
Identities = 77/90 (85%), Positives = 86/90 (95%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEH+GPFNLGNPGEF+MLELA+V
Sbjct: 224 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQV 403
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISR 275
V++TID A IEFRPNT DDPHKRKPDI++
Sbjct: 404 VKETIDTNAKIEFRPNTEDDPHKRKPDITK 493
Score = 131 bits (281), Expect = 4e-030
Identities = 60/91 (65%), Positives = 71/91 (78%)
Frame = -3 / -1
Query: 277 ARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCSPSMSFIS 98
A ++SG LCGSS+VFG NS+ A S+VS+TT ASS+++NSPG PRL GP CSPS+S I
Sbjct: 495 ALVISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSPGFPRLKGPTCSPSISRIR 316
Query: 97 PSTKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
PST+SET KL VC PSP*TVKGS A*AT
Sbjct: 315 PSTRSETNWKLRVCFPSP*TVKGSLRKA*AT 223
>gb|BX253086.1|BX253086 BX253086 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP077G04 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 620
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 74 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 253
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 254 VKELIEPSAQLKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 427
Score = 127 bits (272), Expect = 7e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 423 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFN*AEGSMSSFTASA 244
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 243 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 82
>gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092D07 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 691
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 274 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 453
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 454 VKELIEPSAQLKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 627
Score = 127 bits (272), Expect = 7e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 623 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFN*AEGSMSSFTASA 444
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 443 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 282
>gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_F07_A029 5', mRNA sequence
Length = 734
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 280 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 459
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 460 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 633
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -1
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 629 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 450
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 449 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 288
>gb|CV036240.1|CV036240 RTNACL1_57_F03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_F03_A029 5', mRNA sequence
Length = 777
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 128 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 307
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 308 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 481
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -1
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 477 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 298
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 297 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 136
>gb|CX646741.1|CX646741 COLD1_11_E12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_E12_A029 3', mRNA sequence
Length = 822
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 38 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 217
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 218 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 391
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -1
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 387 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 208
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 207 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 46
>gb|CX646821.1|CX646821 COLD1_11_E12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_E12_A029 5', mRNA sequence
Length = 835
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 243 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 422
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 423 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 596
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -1
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 592 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 413
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 412 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 251
>gb|CX648143.1|CX648143 COLD1_26_G01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_G01_A029 5', mRNA sequence
Length = 786
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 8 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 187
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 188 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 361
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -1
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 357 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 178
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 177 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 16
>gb|CX650015.1|CX650015 COLD1_43_A08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_A08_A029 3', mRNA sequence
Length = 781
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 10 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 189
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 190 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 363
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 359 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 180
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 179 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 18
>gb|DR048632.1|DR048632 RTBOR1_10_E05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E05_A029 3', mRNA sequence
Length = 868
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 97 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 276
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 277 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 450
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 446 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 267
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 266 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 105
>gb|DR071320.1|DR071320 RTDK1_19_C12.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_C12_A029 3', mRNA sequence
Length = 809
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 39 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 218
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 219 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 392
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 388 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 209
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 208 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 47
>gb|DR688096.1|DR688096 EST1078180 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAC049 3' end, mRNA sequence
Length = 544
Score = 191 bits (412), Expect = 4e-048
Identities = 78/118 (66%), Positives = 94/118 (79%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 89 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 268
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 269 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 442
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 438 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 259
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 258 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 97
>gb|DR060989.1|DR060989 RTNIT1_31_H03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_31_H03_A029 3', mRNA sequence
Length = 771
Score = 190 bits (409), Expect = 9e-048
Identities = 78/117 (66%), Positives = 93/117 (79%)
Frame = +3 / +1
Query: 9 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVV 188
AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+ V
Sbjct: 1 AQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAV 180
Query: 189 QDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 181 KELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 351
Score = 128 bits (275), Expect = 3e-029
Identities = 66/114 (57%), Positives = 76/114 (66%)
Frame = -3 / -2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 347 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 168
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 167 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 6
>gb|DR081398.1|DR081398 RTFEPL1_29_G11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_29_G11_A029 3', mRNA sequence
Length = 802
Score = 187 bits (402), Expect = 8e-047
Identities = 72/97 (74%), Positives = 87/97 (89%)
Frame = +3 / +1
Query: 72 QYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPH 251
QYVSDLV+GL++LME H+GPFNLGNPGEF+MLELA+VV++TID A IEF+ NTADDPH
Sbjct: 1 QYVSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPH 180
Query: 252 KRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIF 362
KRKPDI++AK+LL WEP++ LREGLP MV DFRKR+F
Sbjct: 181 KRKPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 291
Score = 119 bits (255), Expect = 2e-026
Identities = 59/96 (61%), Positives = 70/96 (72%)
Frame = -3 / -3
Query: 361 KIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTT 182
K RLRKS T+ G PS + LGS R SFA ++SG L GSSAVF NS+ A S+VS+TT
Sbjct: 290 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 111
Query: 181 LASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY 74
ASS+++NSPGLPRL GP S+S ISPSTKSETY
Sbjct: 110 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSETY 3
>gb|CO365130.1|CO365130 RTK1_23_G05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_G05_A029 5', mRNA sequence
Length = 686
Score = 186 bits (401), Expect = 1e-046
Identities = 77/117 (65%), Positives = 92/117 (78%)
Frame = +3 / -1
Query: 9 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVV 188
AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+ V
Sbjct: 686 AQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAV 507
Query: 189 QDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
++ I+P A ++ NT DDP RK DI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 506 KELIEPSAELKMTENTPDDPRMRKADITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 336
Score = 126 bits (269), Expect = 2e-028
Identities = 65/114 (57%), Positives = 75/114 (65%)
Frame = -3 / +1
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MS + GSS VF A GSM S+T A
Sbjct: 340 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSAFLIRGSSGVFSVIFNSAEGSMSSFTASA 519
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 520 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 681
>gb|CV033876.1|CV033876 RTNACL1_37_D08.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_D08_A029 3', mRNA sequence
Length = 855
Score = 186 bits (400), Expect = 2e-046
Identities = 75/118 (63%), Positives = 93/118 (78%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR EP+TV G QTRSF YVSD+V+GL++LMEG++ GP NLGNPGEF+MLELA+
Sbjct: 151 IAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEA 330
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+ +E NT DDP KRKPDI++A LLGWEPKV LREGLP M DFR+R+
Sbjct: 331 VKELIETSTTVEMVENTPDDPRKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERL 504
Score = 123 bits (263), Expect = 1e-027
Identities = 65/116 (56%), Positives = 75/116 (64%)
Frame = -3 / -2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS + G PSR+ TLGS PRS A +MSG L GSS VF S S+ S+T A
Sbjct: 500 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 321
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSS++NSPG PR GP+ SPS+S I PST SET KL VC+P TV GS L A*A
Sbjct: 320 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*A 153
>gb|DR055465.1|DR055465 RTCA1_23_G10.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_G10_A029 5', mRNA sequence
Length = 637
Score = 186 bits (400), Expect = 2e-046
Identities = 75/118 (63%), Positives = 93/118 (78%)
Frame = +3 / -1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR EP+TV G QTRSF YVSD+V+GL++LMEG++ GP NLGNPGEF+MLELA+
Sbjct: 550 IAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEA 371
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+ +E NT DDP KRKPDI++A LLGWEPKV LREGLP M DFR+R+
Sbjct: 370 VKELIETSTTVEMVENTPDDPRKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERL 197
Score = 123 bits (263), Expect = 1e-027
Identities = 65/116 (56%), Positives = 75/116 (64%)
Frame = -3 / +3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS + G PSR+ TLGS PRS A +MSG L GSS VF S S+ S+T A
Sbjct: 201 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 380
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSS++NSPG PR GP+ SPS+S I PST SET KL VC+P TV GS L A*A
Sbjct: 381 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*A 548
>gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_H04_A029 3', mRNA sequence
Length = 791
Score = 185 bits (399), Expect = 2e-046
Identities = 75/118 (63%), Positives = 93/118 (78%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR EP+TV G QTRSF YVSD+V+GL++LMEG++ GP NLGNPGEF+MLELA+
Sbjct: 223 IAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEA 402
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+ +E NT DDP KRKPDI++A LLGWEPKV LREGLP M DFR+R+
Sbjct: 403 VKEFIETSTTVEMVENTPDDPRKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERL 576
Score = 122 bits (262), Expect = 2e-027
Identities = 65/116 (56%), Positives = 75/116 (64%)
Frame = -3 / -1
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS + G PSR+ TLGS PRS A +MSG L GSS VF S S+ S+T A
Sbjct: 572 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSINSFTASA 393
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSS++NSPG PR GP+ SPS+S I PST SET KL VC+P TV GS L A*A
Sbjct: 392 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*A 225
>gb|BG526951.1|BG526951 NXPV_057_G05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_057_G05 5' similar to Arabidopsis
thaliana sequence At2g47650 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 609
Score = 183 bits (394), Expect = 1e-045
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = +3 / +2
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
VAQALRKEPLTVYGDGKQTRSFQ+VSDLVE M+LMEGEH+GPFNLGNP EF+MLELA+V
Sbjct: 326 VAQALRKEPLTVYGDGKQTRSFQFVSDLVEXXMRLMEGEHVGPFNLGNPXEFTMLELAQV 505
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDIS 272
V++TID A IEFRPNT DDPHKRKPDI+
Sbjct: 506 VKETIDTNAKIEFRPNTEDDPHKRKPDIT 592
Score = 125 bits (268), Expect = 3e-028
Identities = 58/89 (65%), Positives = 69/89 (77%)
Frame = -3 / -1
Query: 271 LMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPS 92
++SG LCGSS+VFG NS+ A S+VS+TT ASS+++NS G PRLNGP CSPS+S I S
Sbjct: 591 VISGFLLCGSSSVFGLNSIFALVSIVSFTTCASSNIVNSXGFPRLNGPTCSPSISRIXXS 412
Query: 91 TKSETY*KLLVCLPSP*TVKGSFLSA*AT 5
T+SET KL VC PSP*TVKGS A*AT
Sbjct: 411 TRSETNWKLRVCFPSP*TVKGSLRKA*AT 325
>gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_G02_A029 3', mRNA sequence
Length = 870
Score = 183 bits (394), Expect = 1e-045
Identities = 74/118 (62%), Positives = 92/118 (77%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR EP+TV G Q RSF YVSD+V+GL++LMEG++ GP NLGNPGEF+MLELA+
Sbjct: 309 IAQALRGEPMTVQAPGTQIRSFCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEA 488
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
V++ I+ +E NT DDP KRKPDI++A LLGWEPKV LREGLP M DFR+R+
Sbjct: 489 VKELIETSTTVEMVENTPDDPRKRKPDITKATTLLGWEPKVTLREGLPLMAEDFRERL 662
Score = 122 bits (262), Expect = 2e-027
Identities = 64/116 (55%), Positives = 75/116 (64%)
Frame = -3 / -3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS + G PSR+ TLGS PRS A +MSG L GSS VF S S+ S+T A
Sbjct: 658 RSRKSSAISGSPSRKVTLGSHPRSVVAFVMSGFLLRGSSGVFSTISTVVDVSISSFTASA 479
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
SSS++NSPG PR GP+ SPS+S I PST SET KL +C+P TV GS L A*A
Sbjct: 478 SSSIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRICVPGAWTVIGSPLRA*A 311
>gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_31_H03_A029 5', mRNA sequence
Length = 683
Score = 182 bits (393), Expect = 1e-045
Identities = 75/114 (65%), Positives = 90/114 (78%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 322 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 501
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDF 347
V++ I+P A ++ NT DDP RKPDI++AK LLGWEP V LREGLPRM DF
Sbjct: 502 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEP*VSLREGLPRMAEDF 663
Score = 121 bits (259), Expect = 4e-027
Identities = 63/111 (56%), Positives = 73/111 (65%)
Frame = -3 / -1
Query: 346 KSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSS 167
KS +RGRPSRR T GS PR FA +MSG + GSS VF A GSM S+T ASS+
Sbjct: 662 KSSAIRGRPSRRET*GSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSN 483
Query: 166 MLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 482 IVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 330
>gb|CO365042.1|CO365042 RTK1_23_G05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_G05_A029 3', mRNA sequence
Length = 705
Score = 182 bits (392), Expect = 2e-045
Identities = 75/115 (65%), Positives = 90/115 (78%)
Frame = +3 / -1
Query: 15 ALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQD 194
ALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+ V++
Sbjct: 705 ALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKE 526
Query: 195 TIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
I+P A ++ NT DDP RK DI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 525 LIEPSAELKMTENTPDDPRMRKADITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 361
Score = 124 bits (265), Expect = 7e-028
Identities = 64/113 (56%), Positives = 74/113 (65%)
Frame = -3 / +2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R RKS +RGRPSRR TLGS PR FA +MS + GSS VF A GSM S+T A
Sbjct: 365 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSAFLIRGSSGVFSVIFNSAEGSMSSFTASA 544
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLS 17
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S LS
Sbjct: 545 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLS 703
>gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_13_D11_A021 5', mRNA
sequence
Length = 679
Score = 182 bits (391), Expect = 3e-045
Identities = 74/110 (67%), Positives = 89/110 (80%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 346 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 525
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRM 335
V++ I+P A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM
Sbjct: 526 VKELIEPSAELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRM 675
Score = 122 bits (260), Expect = 3e-027
Identities = 62/107 (57%), Positives = 72/107 (67%)
Frame = -3 / -3
Query: 334 MRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASSSMLNS 155
+RGRPSRR TLGS PR FA +MSG + GSS VF A GSM S+T ASS+++NS
Sbjct: 674 IRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASASSNIVNS 495
Query: 154 PGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA 14
PG PRL GP+ SPS+S I PST SET KL V +P TV S LSA
Sbjct: 494 PGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSSPLSA 354
>gb|CF479423.1|CF479423 RTWW3_22_G10.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_22_G10_A022 3', mRNA sequence
Length = 641
Score = 182 bits (391), Expect = 3e-045
Identities = 69/90 (76%), Positives = 83/90 (92%)
Frame = +3 / +2
Query: 105 KLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKE 284
+LMEGEH+GPFNLGNPGEF+MLELA+VV++TID A IEFRPNT DDPHKRKPDI++AK+
Sbjct: 2 RLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKD 181
Query: 285 LLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
LLGWEPKV LR+GLP MV DFR+R+FGD++
Sbjct: 182 LLGWEPKVSLRKGLPLMVEDFRRRVFGDEK 271
Score = 133 bits (284), Expect = 2e-030
Identities = 58/87 (66%), Positives = 69/87 (79%)
Frame = -3 / -3
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 264 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 85
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMS 107
TT ASS+++NSPG PRLNGP CSPS+S
Sbjct: 84 TTCASSNIVNSPGFPRLNGPTCSPSIS 4
>gb|DR682084.1|DR682084 EST1072159 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA651, mRNA sequence
Length = 731
Score = 182 bits (391), Expect = 3e-045
Identities = 69/90 (76%), Positives = 83/90 (92%)
Frame = +3 / -3
Query: 105 KLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKRKPDISRAKE 284
+LMEGEH+GPFNLGNPGEF+MLELA+VV++TID A IEFRPNT DDPHKRKPDI++AK+
Sbjct: 729 RLMEGEHVGPFNLGNPGEFTMLELAQVVKETIDTNAKIEFRPNTEDDPHKRKPDITKAKD 550
Query: 285 LLGWEPKVPLREGLPRMVTDFRKRIFGDQE 374
LLGWEPKV LR+GLP MV DFR+R+FGD++
Sbjct: 549 LLGWEPKVSLRKGLPLMVEDFRRRVFGDEK 460
Score = 133 bits (284), Expect = 2e-030
Identities = 58/87 (66%), Positives = 69/87 (79%)
Frame = -3 / +2
Query: 367 SPKIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSW 188
SPK R RKS T+RGRP R TLGSQP SFA ++SG LCGSS+VFG NS+ A S+VS+
Sbjct: 467 SPKTRRRKSSTIRGRPFLRDTLGSQPSRSFALVISGFLLCGSSSVFGLNSIFALVSIVSF 646
Query: 187 TTLASSSMLNSPGLPRLNGPMCSPSMS 107
TT ASS+++NSPG PRLNGP CSPS+S
Sbjct: 647 TTCASSNIVNSPGFPRLNGPTCSPSIS 727
>gb|AI813092.1|AI813092 20F12 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 509
Score = 181 bits (390), Expect = 4e-045
Identities = 70/95 (73%), Positives = 85/95 (89%)
Frame = +3 / +1
Query: 78 VSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEAHIEFRPNTADDPHKR 257
VSDLV+GL++LME H+GPFNLGNPGEF+MLELA+VV++TID A IEF+ NTADDPHKR
Sbjct: 1 VSDLVDGLIRLMENNHVGPFNLGNPGEFTMLELAQVVKETIDSSARIEFKENTADDPHKR 180
Query: 258 KPDISRAKELLGWEPKVPLREGLPRMVTDFRKRIF 362
KPDI++AK+LL WEP++ LREGLP MV DFRKR+F
Sbjct: 181 KPDITKAKDLLKWEPRISLREGLPLMVEDFRKRVF 285
Score = 114 bits (243), Expect = 7e-025
Identities = 57/94 (60%), Positives = 68/94 (72%)
Frame = -3 / -1
Query: 361 KIRLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTT 182
K RLRKS T+ G PS + LGS R SFA ++SG L GSSAVF NS+ A S+VS+TT
Sbjct: 284 KTRLRKSSTINGSPSLKEILGSHFRRSFAFVISGFLLWGSSAVFSLNSILALESIVSFTT 105
Query: 181 LASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSE 80
ASS+++NSPGLPRL GP S+S ISPSTKSE
Sbjct: 104 *ASSNIVNSPGLPRLKGPTWLFSISRISPSTKSE 3
>gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_65_A12_A029 5', mRNA sequence
Length = 794
Score = 180 bits (387), Expect = 1e-044
Identities = 73/116 (62%), Positives = 90/116 (77%)
Frame = +3 / +3
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR EP+TV G QTRSF YVSD+V+GL++LMEG++ GP NLGNPGEF+MLELA+
Sbjct: 447 IAQALRGEPMTVQAPGTQTRSFCYVSDMVDGLIRLMEGDNTGPINLGNPGEFTMLELAEA 626
Query: 186 VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRK 353
V + I+ ++ NT DDP KRKPDI++A LLGWEPKV LREGLP M DFR+
Sbjct: 627 VNELIETSTTVQMVENTPDDPRKRKPDITKATTLLGWEPKVILREGLPLMAEDFRE 794
Score = 119 bits (254), Expect = 2e-026
Identities = 63/114 (55%), Positives = 73/114 (64%)
Frame = -3 / -2
Query: 349 RKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLASS 170
RKS + G PSR+ TLGS PRS A +MSG L GSS VF S+ S+T ASS
Sbjct: 790 RKSSAISGSPSRKITLGSHPRSVVAFVMSGFLLRGSSGVFSTICTVVDVSISSFTASASS 611
Query: 169 SMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGSFLSA*A 8
S++NSPG PR GP+ SPS+S I PST SET KL VC+P TV GS L A*A
Sbjct: 610 SIVNSPGFPRFIGPVLSPSISRIKPSTISET*QKLRVCVPGAWTVIGSPLRA*A 449
>gb|CV036174.1|CV036174 RTNACL1_57_F03.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_F03_A029 3', mRNA sequence
Length = 698
Score = 176 bits (378), Expect = 2e-043
Identities = 71/109 (65%), Positives = 86/109 (78%)
Frame = +3 / +3
Query: 33 LTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKVVQDTIDPEA 212
LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+ V++ I+P A
Sbjct: 6 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEAVKELIEPSA 185
Query: 213 HIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DF R+
Sbjct: 186 ELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFPLRL 332
Score = 118 bits (253), Expect = 3e-026
Identities = 60/107 (56%), Positives = 71/107 (66%)
Frame = -3 / -2
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVFGRNSMCASGSMVSWTTLA 176
R KS +RGRPSR+ TLGS PR FA +MSG + GSS VF A GSM S+T A
Sbjct: 328 RRGKSSAIRGRPSRKETLGSHPRRVFAFVMSGFLIRGSSGVFSVIFNSAEGSMSSFTASA 149
Query: 175 SSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TV 35
SS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV
Sbjct: 148 SSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTV 8
>gb|DR049907.1|DR049907 RTBOR1_19_H03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_19_H03_A029 5', mRNA sequence
Length = 789
Score = 110 bits (234), Expect(2) = 5e-043
Identities = 45/67 (67%), Positives = 56/67 (83%)
Frame = +3 / +1
Query: 6 VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHIGPFNLGNPGEFSMLELAKV 185
+AQALR E LTV G QTRSF YVSD+V+GL++LMEGE+ GP NLGNPGEF+MLELA+
Sbjct: 157 IAQALRGEELTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINLGNPGEFTMLELAEA 336
Query: 186 VQDTIDP 206
V++ I+P
Sbjct: 337 VKELIEP 357
Score = 84.5 bits (178), Expect(2) = 5e-043
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +3 / +3
Query: 210 AHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLREGLPRMVTDFRKRI 359
A ++ NT DDP RKPDI++AK LLGWEPKV LREGLPRM DFR R+
Sbjct: 360 AELKMTENTPDDPRMRKPDITKAKTLLGWEPKVSLREGLPRMAEDFRLRL 509
Score = 75.8 bits (159), Expect(2) = 3e-025
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -3 / -2
Query: 205 GSMVSWTTLASSSMLNSPGLPRLNGPMCSPSMSFISPSTKSETY*KLLVCLPSP*TVKGS 26
GSM S+T ASS+++NSPG PRL GP+ SPS+S I PST SET KL V +P TV S
Sbjct: 356 GSMSSFTASASSNIVNSPGFPRLIGPVFSPSISLIRPSTMSET*QKLRV*VPGACTVSSS 177
Query: 25 FLSA 14
LSA
Sbjct: 176 PLSA 165
Score = 59.3 bits (123), Expect(2) = 3e-025
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = -3 / -3
Query: 355 RLRKSVTMRGRPSRRGTLGSQPRSSFARLMSGLRLCGSSAVF 230
R RKS +RGRPSRR TLGS PR FA +MSG + GSS VF
Sbjct: 505 RRRKSSAIRGRPSRRETLGSHPRRVFAFVMSGFLIRGSSGVF 380
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 304,461,044
Number of Sequences: 355925
Number of extensions: 4077788
Number of successful extensions: 37644
Number of sequences better than 1.0e-020: 132
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 8842493780
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)