TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230260.2.1
(863 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR018147.1|DR018147 STRS1_20_F06.g1_A034 Shoot tip pitch... 188 3e-047
gb|DR018063.1|DR018063 STRS1_20_F06.b1_A034 Shoot tip pitch... 154 1e-041
gb|DR054652.1|DR054652 RTCA1_18_E03.g1_A029 Roots minus cal... 159 3e-038
gb|CO365642.1|CO365642 RTK1_18_G06.b1_A029 Roots minus pota... 144 1e-035
gb|CO365725.1|CO365725 RTK1_18_G06.g1_A029 Roots minus pota... 144 1e-035
gb|DT628027.1|DT628027 EST1156776 Subtracted pine embryo li... 137 7e-035
gb|DN610926.1|DN610926 EST963976 Subtracted pine embryo lib... 137 9e-035
gb|DR694406.1|DR694406 EST1084498 Normalized pine embryo li... 140 1e-033
gb|BX251692.1|BX251692 BX251692 Pinus pinaster differenciat... 135 1e-033
gb|DR387413.1|DR387413 RTHG1_21_C09.g2_A029 Roots plus adde... 144 1e-033
gb|AL750306.1|AL750306 AL750306 RN Pinus pinaster cDNA clon... 141 5e-033
gb|AL750309.1|AL750309 AL750309 RN Pinus pinaster cDNA clon... 138 4e-032
gb|DR111138.1|DR111138 RTS1_15_D02.g1_A029 Roots minus sulf... 138 4e-032
gb|DR101218.1|DR101218 STRR1_71_G10.b1_A033 Stem Response R... 129 2e-031
gb|DR743350.1|DR743350 RTCU1_15_F04.b1_A029 Roots plus adde... 124 4e-031
gb|CO174126.1|CO174126 NDL1_41_G12.g1_A029 Needles control ... 135 5e-031
gb|CO176351.1|CO176351 NDL1_61_A09.g1_A029 Needles control ... 135 5e-031
gb|CV034830.1|CV034830 RTNACL1_12_A02.b1_A029 Roots plus ad... 135 5e-031
gb|DR017808.1|DR017808 STRS1_18_D04.g1_A034 Shoot tip pitch... 135 5e-031
gb|DR022326.1|DR022326 STRS1_50_G10.b1_A034 Shoot tip pitch... 135 5e-031
gb|DR057327.1|DR057327 RTNIT1_5_D06.b1_A029 Roots minus nit... 135 5e-031
gb|DR098480.1|DR098480 STRR1_45_F11.g1_A033 Stem Response R... 135 5e-031
gb|DR160331.1|DR160331 RTFE1_5_H08.b1_A029 Roots minus iron... 135 5e-031
gb|DR160425.1|DR160425 RTFE1_5_H08.g1_A029 Roots minus iron... 135 5e-031
gb|BX680287.1|BX680287 BX680287 RS Pinus pinaster cDNA clon... 134 6e-031
gb|CO163973.1|CO163973 FLD1_45_B03.b1_A029 Root flooded Pin... 134 6e-031
gb|DR094057.1|DR094057 STRR1_12_D11.b1_A033 Stem Response R... 134 6e-031
gb|DR683333.1|DR683333 EST1073409 Normalized pine embryo li... 134 6e-031
gb|CF472374.1|CF472374 RTDS1_9_F04.b1_A015 Drought-stressed... 133 1e-030
gb|CO163978.1|CO163978 FLD1_45_B08.b1_A029 Root flooded Pin... 133 1e-030
gb|CO164054.1|CO164054 FLD1_45_B08.g1_A029 Root flooded Pin... 133 1e-030
gb|CO167640.1|CO167640 FLD1_70_E10.b1_A029 Root flooded Pin... 133 1e-030
gb|CO368279.1|CO368279 RTK1_39_E03.g1_A029 Roots minus pota... 133 1e-030
gb|AY064169.1| Pinus taeda cinnamoyl-CoA reductase mRNA, co... 133 1e-030
gb|CV033083.1|CV033083 RTNACL1_20_D09.b1_A029 Roots plus ad... 88 1e-030
gb|BX251258.1|BX251258 BX251258 Pinus pinaster differenciat... 88 5e-030
gb|BX680695.1|BX680695 BX680695 RS Pinus pinaster cDNA clon... 88 5e-030
gb|CV034910.1|CV034910 RTNACL1_12_A02.g1_A029 Roots plus ad... 130 1e-029
gb|DR017730.1|DR017730 STRS1_18_D04.b1_A034 Shoot tip pitch... 130 1e-029
gb|DR052722.1|DR052722 RTCA1_6_A09.g1_A029 Roots minus calc... 84 1e-029
gb|BF610086.1|BF610086 NXSI_054_E12_F NXSI (Nsf Xylem Side ... 129 2e-029
gb|DR684650.1|DR684650 EST1074727 Normalized pine embryo li... 86 2e-029
gb|AL750311.1|AL750311 AL750311 RN Pinus pinaster cDNA clon... 129 3e-029
gb|AL750312.1|AL750312 AL750312 RN Pinus pinaster cDNA clon... 129 3e-029
gb|CF472400.1|CF472400 RTDS1_9_F04.g1_A015 Drought-stressed... 127 1e-028
gb|DR387793.1|DR387793 RTHG1_24_E03.b1_A029 Roots plus adde... 122 2e-027
gb|DR691625.1|DR691625 EST1081712 Normalized pine embryo li... 122 5e-027
gb|CO164049.1|CO164049 FLD1_45_B03.g1_A029 Root flooded Pin... 121 6e-027
gb|AW056808.1|AW056808 ST56D11 Pine TriplEx shoot tip libra... 120 1e-026
gb|DR386732.1|DR386732 RTHG1_17_D02.b1_A029 Roots plus adde... 81 2e-026
gb|CF397224.1|CF397224 RTDS3_2_E08.b2_A022 Drought-stressed... 118 6e-026
gb|DT631025.1|DT631025 EST1145956 Normalized pine embryo li... 117 1e-025
gb|DR091958.1|DR091958 RTAL1_25_C12.b1_A029 Roots plus adde... 107 2e-025
gb|DR048529.1|DR048529 RTBOR1_9_B07.g1_A029 Roots plus adde... 70 2e-025
gb|CF394854.1|CF394854 RTDS2_8_G09.b1_A021 Drought-stressed... 116 3e-025
gb|CO361450.1|CO361450 NDL2_4_H11.g1_A029 Needles control 2... 105 6e-025
gb|DR694679.1|DR694679 EST1084771 Normalized pine embryo li... 114 1e-024
gb|DT638830.1|DT638830 EST1153761 Normalized pine embryo li... 114 1e-024
gb|DR048451.1|DR048451 RTBOR1_9_B07.b1_A029 Roots plus adde... 84 1e-024
gb|DR057944.1|DR057944 RTNIT1_8_F03.g1_A029 Roots minus nit... 88 4e-024
gb|DR384416.1|DR384416 RTHG1_2_C11.b1_A029 Roots plus added... 84 5e-024
gb|DT632390.1|DT632390 EST1147321 Normalized pine embryo li... 86 7e-024
gb|DR386440.1|DR386440 RTHG1_15_F01.b1_A029 Roots plus adde... 64 1e-023
gb|DR384893.1|DR384893 RTHG1_5_F12.b1_A029 Roots plus added... 81 6e-023
gb|DR386747.1|DR386747 RTHG1_17_E10.b1_A029 Roots plus adde... 61 1e-022
gb|CF398877.1|CF398877 RTDS3_11_A07.b1_A022 Drought-stresse... 107 1e-022
gb|CF397252.1|CF397252 RTDS3_2_E08.g1_A022 Drought-stressed... 106 2e-022
gb|CO173479.1|CO173479 NDL1_36_B03.g1_A029 Needles control ... 106 2e-022
gb|DR743419.1|DR743419 RTCU1_15_F04.g1_A029 Roots plus adde... 106 2e-022
gb|BX250949.1|BX250949 BX250949 Pinus pinaster differenciat... 105 6e-022
gb|CF394951.1|CF394951 RTDS2_8_G09.g1_A021 Drought-stressed... 105 6e-022
gb|DR177989.1|DR177989 RTMNUT1_8_C12.g1_A029 Roots minus mi... 105 6e-022
gb|DR025539.1|DR025539 STRS1_72_E11.b1_A034 Shoot tip pitch... 104 8e-022
gb|DT631435.1|DT631435 EST1146366 Normalized pine embryo li... 104 8e-022
gb|DT636149.1|DT636149 EST1151080 Normalized pine embryo li... 104 8e-022
gb|CV034689.1|CV034689 RTNACL1_10_H12.g1_A029 Roots plus ad... 103 2e-021
gb|CO201268.1|CO201268 RTCNT2_4_E02.g1_A029 Root control 2 ... 102 3e-021
gb|DT636954.1|DT636954 EST1151885 Normalized pine embryo li... 97 4e-021
gb|DR160987.1|DR160987 RTFE1_9_E02.b1_A029 Roots minus iron... 102 4e-021
>gb|DR018147.1|DR018147 STRS1_20_F06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_F06_A034 5', mRNA sequence
Length = 620
Score = 188 bits (406), Expect = 3e-047
Identities = 73/168 (43%), Positives = 113/168 (67%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC +K KR V +P P+ + E WSD EYCRK E WY+++KT++E +
Sbjct: 114 KACSVSKVKRVIMTSSVGAVLMDPQRPRDKFVDESCWSDPEYCRKTENWYYMAKTVSEQD 293
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ Y+ ++GLD+++ICPSLV+GP+LQP +N S + + + GD E ++ + +VDVRDV
Sbjct: 294 AWHYSEESGLDLISICPSLVLGPILQPKLNASSLILVKLLNGDLERCENKARVIVDVRDV 473
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A A +LAYE A+GRYLC++ +++ ++V+ILK YP Y YP+ +V+
Sbjct: 474 AKAHILAYEIPSAAGRYLCTAHSVKTKELVDILKRLYPQYNYPKDYVD 617
>gb|DR018063.1|DR018063 STRS1_20_F06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_F06_A034 3', mRNA sequence
Length = 770
Score = 154 bits (330), Expect(2) = 1e-041
Identities = 57/125 (45%), Positives = 93/125 (74%)
Frame = -2 / +3
Query: 733 RKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGD 554
RK E WY+++KT++E +A+ Y+ ++GLD+++ICPSLV+GP+LQP +N S + + + GD
Sbjct: 3 RKTENWYYMAKTVSEQDAWHYSEESGLDLISICPSLVLGPILQPKLNASSLILVKLLNGD 182
Query: 553 QEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYP 374
E ++ + +VDVRDVA A +LAYE A+GRYLC++ +++ ++V+ILK YP Y YP
Sbjct: 183 LERCENKARVIVDVRDVAKAHILAYEIPSAAGRYLCTAHSVKTKELVDILKRLYPQYNYP 362
Query: 373 QKFVE 359
+ +V+
Sbjct: 363 KDYVD 377
Score = 36.8 bits (74), Expect(2) = 1e-041
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2 / +3
Query: 364 VEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+++ G + KLR+LG +E TL D +EC++ GIL *
Sbjct: 384 LDSSGVEQLSGNKLRELGLEYMQLEQTLVDIVECFKHKGILK* 512
>gb|DR054652.1|DR054652 RTCA1_18_E03.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_18_E03_A029 5', mRNA sequence
Length = 776
Score = 159 bits (341), Expect = 3e-038
Identities = 63/141 (44%), Positives = 94/141 (66%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KAC +K KR V +P P+ + E WSD EYCRK E WY+++KT++E +
Sbjct: 346 KACSVSKVKRVIMTSSVGAVLMDPQRPRDKFVDESCWSDPEYCRKTENWYYMAKTVSEQD 525
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ Y+ ++GLD+++ICPSLV+GP+LQP +N S + + + GD E ++ + +VDVRDV
Sbjct: 526 AWHYSEESGLDLISICPSLVLGPILQPKLNASSLILVKLLNGDLERCENKARVIVDVRDV 705
Query: 502 AGALLLAYENLQASGRYLCSS 440
A A +LAYE A+GRYLC++
Sbjct: 706 AKAHILAYEIPSAAGRYLCTA 768
>gb|CO365642.1|CO365642 RTK1_18_G06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_18_G06_A029 3', mRNA sequence
Length = 895
Score = 144 bits (308), Expect(2) = 1e-035
Identities = 61/160 (38%), Positives = 90/160 (56%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A + K KR +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 27 QAAQKEKVKRLVLTSSTAATVPSPNWPADVPKDENCWADLDYCKENGIWYPASKTLAEKT 206
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGLD+V I P V+GP+L P +N S+ +FL ++G E ++ V V+DV
Sbjct: 207 AWNFAKETGLDVVVINPGTVLGPILPPTINASMAMFLQLLQGGTEKYQNLYTGCVHVKDV 386
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
A +L YE L ASGR++C I SD +++ YP Y
Sbjct: 387 AKGHILLYETLSASGRHICVEATIHWSDFAEMVEKLYPEY 506
Score = 26.7 bits (52), Expect(2) = 1e-035
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2 / +3
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+KL LG PM+ +++++ + G LN*
Sbjct: 567 KKLMDLGLVFTPMDQVIKEAVSSLKEKGFLN* 662
>gb|CO365725.1|CO365725 RTK1_18_G06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_18_G06_A029 5', mRNA sequence
Length = 843
Score = 144 bits (308), Expect(2) = 1e-035
Identities = 61/160 (38%), Positives = 90/160 (56%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A + K KR +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 163 QAAQKEKVKRLVLTSSTAATVPSPNWPADVPKDENCWADLDYCKENGIWYPASKTLAEKT 342
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGLD+V I P V+GP+L P +N S+ +FL ++G E ++ V V+DV
Sbjct: 343 AWNFAKETGLDVVVINPGTVLGPILPPTINASMAMFLQLLQGGTEKYQNLYTGCVHVKDV 522
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
A +L YE L ASGR++C I SD +++ YP Y
Sbjct: 523 AKGHILLYETLSASGRHICVEATIHWSDFAEMVEKLYPEY 642
Score = 26.7 bits (52), Expect(2) = 1e-035
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2 / +1
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+KL LG PM+ +++++ + G LN*
Sbjct: 703 KKLMDLGLVFTPMDQVIKEAVSSLKEKGFLN* 798
>gb|DT628027.1|DT628027 EST1156776 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMCT43 5' end, mRNA sequence
Length = 840
Score = 137 bits (294), Expect(2) = 7e-035
Identities = 61/160 (38%), Positives = 89/160 (55%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A +AK KR + +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 16 QAAQKAKVKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKA 195
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGL +V I P V+GP+L PA+N S+ +FL ++G E ++ V V+DV
Sbjct: 196 AWDFAKETGLGVVVINPGTVMGPILPPAINASMAMFLQLLQGGTEGYQNFYMGCVHVKDV 375
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
A +L YE ASGR+LC SD ++ YP Y
Sbjct: 376 ADGHILLYETPSASGRHLCVEATNHWSDFAEMVAKLYPEY 495
Score = 30.4 bits (60), Expect(2) = 7e-035
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2 / +1
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+KL LG PME ++DS+ + G LN*
Sbjct: 556 KKLVDLGLVFTPMEQVIKDSVSSLKEKGFLN* 651
>gb|DN610926.1|DN610926 EST963976 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAV67, mRNA sequence
Length = 824
Score = 137 bits (293), Expect(2) = 9e-035
Identities = 61/159 (38%), Positives = 88/159 (55%)
Frame = -2 / -3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
A +AK KR + +P+WP E+ W+D +YC++N WY SKTLAE A
Sbjct: 822 AAQKAKVKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAA 643
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ +A +TGL +V I P V+GP+L PA+N S+ +FL ++G E ++ V V+DVA
Sbjct: 642 WDFAKETGLGVVVINPGTVMGPILPPAINASMAMFLQLLQGGTEGYQNFYMGCVHVKDVA 463
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
+L YE ASGR+LC SD ++ YP Y
Sbjct: 462 DGHILLYETPSASGRHLCVEATNHWSDFAEMVAKLYPEY 346
Score = 30.4 bits (60), Expect(2) = 9e-035
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+KL LG PME ++DS+ + G LN*
Sbjct: 285 KKLVDLGLVFTPMEQVIKDSVSSLKEKGFLN* 190
>gb|DR694406.1|DR694406 EST1084498 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEC07 3' end, mRNA sequence
Length = 811
Score = 140 bits (300), Expect(2) = 1e-033
Identities = 62/160 (38%), Positives = 90/160 (56%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A +AK KR + +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 127 QAAQKAKVKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKA 306
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGLD+V I P V+GP+L PA+N S+ +FL ++G E ++ V V+DV
Sbjct: 307 AWDFAKETGLDVVVINPGTVMGPILPPAINASMAMFLQLLQGGTEGYQNFYMGCVHVKDV 486
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
A +L YE ASGR+LC SD ++ YP Y
Sbjct: 487 AEGHILLYETPSASGRHLCVEATNHWSDFAEMVAKLYPEY 606
Score = 23.5 bits (45), Expect(2) = 1e-033
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2 / +1
Query: 331 EKLRKLGWTSRPMEDTLRDSI 269
+KL LG PME ++DS+
Sbjct: 667 KKLVDLGLVFTPMEQVIKDSV 729
>gb|BX251692.1|BX251692 BX251692 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP054A07 similar to DIHYDROFLAVONOL 4
REDUCTASE, mRNA sequence
Length = 701
Score = 135 bits (289), Expect(2) = 1e-033
Identities = 59/152 (38%), Positives = 85/152 (55%)
Frame = -2 / +3
Query: 838 KRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKT 659
KR + +P+WP E+ W+D +YC++N WY SKTLAE A+ +A +T
Sbjct: 3 KRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAWDFAKET 182
Query: 658 GLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAY 479
GLD+V I P V+GP+L PA+N S+ +FL ++G E ++ V V+DVA +L Y
Sbjct: 183 GLDVVVINPGTVMGPILPPAINASMAMFLQLLQGGTEAYQNFYMGCVHVKDVAEGHILLY 362
Query: 478 ENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
E ASGR+LC SD ++ YP Y
Sbjct: 363 ETPSASGRHLCVEATNHWSDFAEMVAKLYPEY 458
Score = 28.6 bits (56), Expect(2) = 1e-033
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2 / +3
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+K LG PME ++DS+ + G LN*
Sbjct: 519 KKFVDLGLVFTPMEQVIKDSVSSLKEKGFLN* 614
>gb|DR387413.1|DR387413 RTHG1_21_C09.g2_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_21_C09_A029 5', mRNA sequence
Length = 611
Score = 144 bits (308), Expect = 1e-033
Identities = 61/160 (38%), Positives = 90/160 (56%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A + K KR +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 121 QAAQKEKVKRLVLTSSTAATVPSPNWPADVPKDENCWADLDYCKENGIWYPASKTLAEKT 300
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGLD+V I P V+GP+L P +N S+ +FL ++G E ++ V V+DV
Sbjct: 301 AWNFAKETGLDVVVINPGTVLGPILPPTINASMAMFLQLLQGGTEKYQNLYTGCVHVKDV 480
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
A +L YE L ASGR++C I SD +++ YP Y
Sbjct: 481 AKGHILLYETLSASGRHICVEATIHWSDFAEMVEKLYPEY 600
>gb|AL750306.1|AL750306 AL750306 RN Pinus pinaster cDNA clone RN01A01 similar to CINNAMOYL
COA REDUCTASE, mRNA sequence
Length = 519
Score = 141 bits (303), Expect = 5e-033
Identities = 62/160 (38%), Positives = 90/160 (56%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A +AK KR + +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 5 QAAQKAKVKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKA 184
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGLD+V I P V+GP+L PA+N S+ +FL ++G E ++ V V+DV
Sbjct: 185 AWDFAKETGLDVVVINPGTVMGPILPPAINASMAMFLQLLQGGTEAYQNFYMGCVHVKDV 364
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
A +L YE ASGR+LC SD ++ YP Y
Sbjct: 365 AEGHILLYETPSASGRHLCVEATNHWSDFAEMVAKLYPEY 484
>gb|AL750309.1|AL750309 AL750309 RN Pinus pinaster cDNA clone RN01A03 similar to CINNAMOYL
COA REDUCTASE, mRNA sequence
Length = 483
Score = 138 bits (297), Expect = 4e-032
Identities = 61/158 (38%), Positives = 89/158 (56%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A +AK KR + +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 5 QAAQKAKVKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKA 184
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGLD+V I P V+GP+L PA+N S+ +FL ++G E ++ V V+DV
Sbjct: 185 AWDFAKETGLDVVVINPGTVMGPILPPAINASMAMFLQLLQGGTEAYQNFYMGCVHVKDV 364
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYP 389
A +L YE ASGR+LC SD ++ YP
Sbjct: 365 AEGHILLYETPSASGRHLCVEATNHWSDFAEMVAKLYP 478
>gb|DR111138.1|DR111138 RTS1_15_D02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_15_D02_A029 5', mRNA sequence
Length = 825
Score = 138 bits (297), Expect = 4e-032
Identities = 63/160 (39%), Positives = 87/160 (54%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A A+ KR + NP+WP E+SW+D EYC +++ WY +SKTLAE
Sbjct: 342 EASRRAQVKRVVLTSSISSLVPNPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKA 521
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ Y +D+V I PS +GPLLQP +N S V L ++G Q+ + V V DV
Sbjct: 522 AWEYTNTHKMDMVAIHPSTCLGPLLQPRLNASSGVLLQLLQGTQDTQSNYWLGCVHVADV 701
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
A A +L YE ASGRYLC++ I SD ++ P Y
Sbjct: 702 AKAQILLYETPSASGRYLCTNGIIHFSDFAEVVAKICPEY 821
>gb|DR101218.1|DR101218 STRR1_71_G10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_71_G10_A033 3', mRNA sequence
Length = 834
Score = 129 bits (277), Expect(2) = 2e-031
Identities = 54/127 (42%), Positives = 79/127 (62%)
Frame = -2 / +3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E+ W+D +YC++N WY SKTLAE A+ +A +TGLD+V I P V+GP+L P +N S+
Sbjct: 18 ENCWADLDYCKENGIWYPASKTLAEKTAWNFAKETGLDVVVINPGTVLGPILPPTINASM 197
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
+FL ++G E ++ V V+DVA +L YE L ASGR++C I SD ++
Sbjct: 198 AMFLQLLQGGTEKYQNLYTGCVHVKDVAKGHILLYETLSASGRHICVEATIHWSDFAEMV 377
Query: 403 KTEYPTY 383
+ YP Y
Sbjct: 378 EKLYPEY 398
Score = 26.7 bits (52), Expect(2) = 2e-031
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2 / +3
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+KL LG PM+ +++++ + G LN*
Sbjct: 495 KKLMDLGLVFTPMDQVIKEAVSSLKEKGFLN* 590
>gb|DR743350.1|DR743350 RTCU1_15_F04.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_15_F04_A029 3', mRNA sequence
Length = 813
Score = 124 bits (266), Expect(2) = 4e-031
Identities = 54/127 (42%), Positives = 77/127 (60%)
Frame = -2 / +3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E+ W+D +YC++N WY SKTLAE A+ +A +TGLD+V I P V+GP+L PA+N S+
Sbjct: 18 ENCWTDLDYCKENGIWYPASKTLAEKAAWDFAKETGLDVVVINPGTVMGPILPPAINASM 197
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
+FL ++G E ++ V V+DVA +L YE ASGR+LC SD ++
Sbjct: 198 AMFLQLLQGGTEGYQNFYMGCVHVKDVAEGHILLYETPSASGRHLCVEATNHWSDFAEMV 377
Query: 403 KTEYPTY 383
YP Y
Sbjct: 378 AKLYPEY 398
Score = 30.4 bits (60), Expect(2) = 4e-031
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2 / +3
Query: 331 EKLRKLGWTSRPMEDTLRDSIECYRAMGILN* 236
+KL LG PME ++DS+ + G LN*
Sbjct: 459 KKLVDLGLVFTPMEQVIKDSVSSLKEKGFLN* 554
>gb|CO174126.1|CO174126 NDL1_41_G12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_41_G12_A029 5', mRNA sequence
Length = 637
Score = 135 bits (289), Expect = 5e-031
Identities = 59/167 (35%), Positives = 91/167 (54%)
Frame = -2 / +3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A +R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 21 ACAVAGVRRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 200
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 201 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 380
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 381 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 521
>gb|CO176351.1|CO176351 NDL1_61_A09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_61_A09_A029 5', mRNA sequence
Length = 825
Score = 135 bits (289), Expect = 5e-031
Identities = 60/160 (37%), Positives = 87/160 (54%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
KA AK KR + NP WP + ED W+D +C++ + WY +SKTLAE
Sbjct: 251 KASTAAKVKRVVITSSISSMIPNPSWPTKKPVDEDCWTDLAFCKEKDLWYPISKTLAEKA 430
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ Y+ +TGL+IV I P+ V+GP++ N S+ + L ++G + + V V+DV
Sbjct: 431 AWTYSKETGLEIVAINPATVLGPIIPATFNASIAMILRLLEGHTDTYDNFWLGCVHVKDV 610
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
A A +L YE ASGR+LC S + SD I+ P Y
Sbjct: 611 ARAQILLYETPSASGRHLCISRMLPFSDFAEIVAKICPQY 730
>gb|CV034830.1|CV034830 RTNACL1_12_A02.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_12_A02_A029 3', mRNA sequence
Length = 715
Score = 135 bits (289), Expect = 5e-031
Identities = 59/138 (42%), Positives = 80/138 (57%)
Frame = -2 / +1
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
NP+WP E+SW+D EYC +++ WY +SKTLAE A+ Y +D+V I PS +G
Sbjct: 10 NPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKAAWEYTNTHKMDMVAIHPSTCLG 189
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
PLLQP +N S V L ++G Q+ + V V DVA A +L YE ASGRYLC++
Sbjct: 190 PLLQPRLNASSGVLLQLLQGTQDTQSNHWLGCVHVADVAKAQILLYETPSASGRYLCTNG 369
Query: 436 AIRVSDIVNILKTEYPTY 383
I SD ++ P Y
Sbjct: 370 IIHFSDFAEVVAKICPEY 423
>gb|DR017808.1|DR017808 STRS1_18_D04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_D04_A034 5', mRNA sequence
Length = 810
Score = 135 bits (289), Expect = 5e-031
Identities = 59/167 (35%), Positives = 91/167 (54%)
Frame = -2 / +1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A +R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 76 ACAVAGVRRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 255
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 256 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 435
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 436 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 576
>gb|DR022326.1|DR022326 STRS1_50_G10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_50_G10_A034 3', mRNA sequence
Length = 887
Score = 135 bits (289), Expect = 5e-031
Identities = 59/167 (35%), Positives = 91/167 (54%)
Frame = -2 / +1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A +R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 61 ACAVAGVRRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 240
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 241 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 420
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 421 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 561
>gb|DR057327.1|DR057327 RTNIT1_5_D06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_5_D06_A029 3', mRNA sequence
Length = 823
Score = 135 bits (289), Expect = 5e-031
Identities = 59/167 (35%), Positives = 91/167 (54%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A +R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 62 ACAVAGVRRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 241
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 242 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 421
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 422 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 562
>gb|DR098480.1|DR098480 STRR1_45_F11.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_45_F11_A033 5', mRNA sequence
Length = 708
Score = 135 bits (289), Expect = 5e-031
Identities = 59/167 (35%), Positives = 91/167 (54%)
Frame = -2 / +1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A +R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 169 ACAVAGVRRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 348
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 349 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 528
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 529 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 669
>gb|DR160331.1|DR160331 RTFE1_5_H08.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_5_H08_A029 3', mRNA sequence
Length = 867
Score = 135 bits (289), Expect = 5e-031
Identities = 59/167 (35%), Positives = 91/167 (54%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A +R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 17 ACAVAGVRRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 196
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 197 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 376
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 377 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 517
>gb|DR160425.1|DR160425 RTFE1_5_H08.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_5_H08_A029 5', mRNA sequence
Length = 845
Score = 135 bits (289), Expect = 5e-031
Identities = 59/167 (35%), Positives = 91/167 (54%)
Frame = -2 / +1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A +R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 319 ACAVAGVRRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 498
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 499 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 678
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 679 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 819
>gb|BX680287.1|BX680287 BX680287 RS Pinus pinaster cDNA clone RS41E08, mRNA sequence
Length = 613
Score = 134 bits (288), Expect = 6e-031
Identities = 59/153 (38%), Positives = 88/153 (57%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A +AK KR + +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 155 QAAQKAKVKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKA 334
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGLD+V I P V+GP+L PA+N S+ +FL ++G E ++ V V+DV
Sbjct: 335 AWDFAKETGLDVVVINPGTVMGPILPPAINASMGMFLQLLQGGTEAYQNFYMGCVHVKDV 514
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
A +L YE+ ASGR+LC SD ++
Sbjct: 515 AEGHILLYESPSASGRHLCVEATNHWSDFAEMV 613
>gb|CO163973.1|CO163973 FLD1_45_B03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_B03_A029 3', mRNA sequence
Length = 815
Score = 134 bits (288), Expect = 6e-031
Identities = 59/138 (42%), Positives = 80/138 (57%)
Frame = -2 / +1
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
NP+WP E+SW+D EYC +++ WY +SKTLAE A+ Y +D+V I PS +G
Sbjct: 7 NPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKAAWEYTNTHKMDMVAIHPSTCLG 186
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
PLLQP +N S V L ++G Q+ + V V DVA A +L YE ASGRYLC++
Sbjct: 187 PLLQPRLNASSGVLLQLLQGTQDTQSNYWLGCVHVADVAKAQILLYETPSASGRYLCTNG 366
Query: 436 AIRVSDIVNILKTEYPTY 383
I SD ++ P Y
Sbjct: 367 IIHFSDFAEVVAKICPEY 420
>gb|DR094057.1|DR094057 STRR1_12_D11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_D11_A033 3', mRNA sequence
Length = 797
Score = 134 bits (288), Expect = 6e-031
Identities = 59/167 (35%), Positives = 91/167 (54%)
Frame = -2 / +3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A +R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 33 ACAVAGLRRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 212
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 213 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 392
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 393 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 533
>gb|DR683333.1|DR683333 EST1073409 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAF96, mRNA sequence
Length = 784
Score = 134 bits (288), Expect = 6e-031
Identities = 59/138 (42%), Positives = 80/138 (57%)
Frame = -2 / -1
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
NP+WP E+SW+D EYC +++ WY +SKTLAE A+ Y +D+V I PS +G
Sbjct: 781 NPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKAAWEYTNTHKMDMVAIHPSTCLG 602
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
PLLQP +N S V L ++G Q+ + V V DVA A +L YE ASGRYLC++
Sbjct: 601 PLLQPRLNASSGVLLQLLQGTQDTQSNYWLGCVHVADVAKAQILLYETPSASGRYLCTNG 422
Query: 436 AIRVSDIVNILKTEYPTY 383
I SD ++ P Y
Sbjct: 421 IIHFSDFAEVVAKICPEY 368
>gb|CF472374.1|CF472374 RTDS1_9_F04.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_9_F04_A015 3', mRNA sequence
Length = 612
Score = 133 bits (286), Expect = 1e-030
Identities = 59/167 (35%), Positives = 90/167 (53%)
Frame = -2 / -1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 504 ACAVAGVHRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 325
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 324 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 145
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 144 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 4
>gb|CO163978.1|CO163978 FLD1_45_B08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_B08_A029 3', mRNA sequence
Length = 843
Score = 133 bits (286), Expect = 1e-030
Identities = 59/167 (35%), Positives = 90/167 (53%)
Frame = -2 / -1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 540 ACAVAGVHRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 361
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 360 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 181
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 180 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 40
>gb|CO164054.1|CO164054 FLD1_45_B08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_B08_A029 5', mRNA sequence
Length = 928
Score = 133 bits (286), Expect = 1e-030
Identities = 59/167 (35%), Positives = 90/167 (53%)
Frame = -2 / -3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 764 ACAVAGVHRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 585
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 584 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 405
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 404 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 264
>gb|CO167640.1|CO167640 FLD1_70_E10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_70_E10_A029 3', mRNA sequence
Length = 831
Score = 133 bits (286), Expect = 1e-030
Identities = 59/167 (35%), Positives = 90/167 (53%)
Frame = -2 / +1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 67 ACAVAGVHRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 246
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 247 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 426
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 427 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 567
>gb|CO368279.1|CO368279 RTK1_39_E03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_39_E03_A029 5', mRNA sequence
Length = 850
Score = 133 bits (286), Expect = 1e-030
Identities = 59/167 (35%), Positives = 90/167 (53%)
Frame = -2 / -3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 791 ACAVAGVHRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 612
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N S+ L Y+ G + + + V VRDVA
Sbjct: 611 WERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVA 432
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V++L + +P Y P K E
Sbjct: 431 EAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQYPIPTKVKE 291
>gb|AY064169.1| Pinus taeda cinnamoyl-CoA reductase mRNA, complete cds
Length = 1359
Score = 133 bits (286), Expect = 1e-030
Identities = 59/167 (35%), Positives = 91/167 (54%)
Frame = -2 / +3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A +R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 579 ACAVAGVRRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 758
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A GLD+V + P +V+GP+LQ ++N+S+ L Y+ G + + + V VRDVA
Sbjct: 759 WERAKDKGLDLVVVNPCVVLGPVLQSSINSSIIHILKYLTGSAKTYANSVQAYVHVRDVA 938
Query: 499 GALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
A +L YE+ ASGRYLC+ + D+V+ L + +P Y P K E
Sbjct: 939 EAHILVYESPSASGRYLCAESVLHRGDVVDSLASMFPQYPIPTKVKE 1079
>gb|CV033083.1|CV033083 RTNACL1_20_D09.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_20_D09_A029 3', mRNA sequence
Length = 911
Score = 87.7 bits (185), Expect(3) = 1e-030
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = -2 / +3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +SD EYC++ + WY LSKTLAE A+ +A + G+D+VTI P++VIG LLQP +NTS
Sbjct: 9 ETWFSDAEYCKQTKAWYQLSKTLAEETAWKFAKEKGIDVVTINPAMVIGTLLQPTLNTSC 188
Query: 583 KVFLSYIKG 557
L + G
Sbjct: 189 AAILQIMNG 215
Score = 47.3 bits (97), Expect(3) = 1e-030
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = -2 / +3
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
V V+DVA A +LA+E A+GRYL +S+IV IL YP P K
Sbjct: 249 VSVKDVANAHILAFEVPSANGRYLLVERVAHLSEIVKILSKLYPGCALPTK 401
Score = 36.3 bits (73), Expect(3) = 1e-030
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 343 TYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN 239
T + EK+ KLG P+E+ LRD++E + +LN
Sbjct: 435 TVSKEKIEKLGLNYTPIEEALRDTVESLKEKKLLN 539
>gb|BX251258.1|BX251258 BX251258 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP047D06, mRNA sequence
Length = 664
Score = 88.1 bits (186), Expect(3) = 5e-030
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = -2 / +2
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +SD EYC++ + WY LSKTLAE A+ +A + G+D+VTI P++VIG LLQP +NTS
Sbjct: 38 ESWFSDAEYCKQTKAWYQLSKTLAEETAWKFAKEKGIDVVTINPAMVIGTLLQPTLNTSC 217
Query: 583 KVFLSYIKG 557
L + G
Sbjct: 218 AAILQLMNG 244
Score = 45.1 bits (92), Expect(3) = 5e-030
Identities = 23/51 (45%), Positives = 28/51 (54%)
Frame = -2 / +2
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
V V+DVA A +LA+E A+GRYL S+IV IL YP P K
Sbjct: 278 VSVKDVAKAHILAFEVPSANGRYLLVERIAHFSEIVKILSKLYPGCALPTK 430
Score = 36.3 bits (73), Expect(3) = 5e-030
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2 / +2
Query: 343 TYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN 239
T + EK+ KLG P+E+ LRD++E + +LN
Sbjct: 464 TVSKEKIEKLGLNYTPIEEALRDTVESLKEKKLLN 568
>gb|BX680695.1|BX680695 BX680695 RS Pinus pinaster cDNA clone RS47D1, mRNA sequence
Length = 658
Score = 88.1 bits (186), Expect(3) = 5e-030
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = -2 / +3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +SD EYC++ + WY LSKTLAE A+ +A + G+D+VTI P++VIG LLQP +NTS
Sbjct: 42 ESWFSDAEYCKQTKAWYQLSKTLAEETAWKFAKEKGIDVVTINPAMVIGTLLQPTLNTSC 221
Query: 583 KVFLSYIKG 557
L + G
Sbjct: 222 AAILQLMNG 248
Score = 45.1 bits (92), Expect(3) = 5e-030
Identities = 23/51 (45%), Positives = 28/51 (54%)
Frame = -2 / +3
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
V V+DVA A +LA+E A+GRYL S+IV IL YP P K
Sbjct: 282 VSVKDVAKAHILAFEVPSANGRYLLVERIAHFSEIVKILSKLYPGCALPTK 434
Score = 36.3 bits (73), Expect(3) = 5e-030
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 343 TYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN 239
T + EK+ KLG P+E+ LRD++E + +LN
Sbjct: 468 TVSKEKIEKLGLNYTPIEEALRDTVESLKEKKLLN 572
>gb|CV034910.1|CV034910 RTNACL1_12_A02.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_12_A02_A029 5', mRNA sequence
Length = 805
Score = 130 bits (279), Expect = 1e-029
Identities = 59/144 (40%), Positives = 81/144 (56%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A A+ KR + NP+WP E+SW+D EYC +++ WY +SKTLAE
Sbjct: 369 EASRRAQVKRVVLTSSISSLVPNPNWPPNTVIDENSWTDIEYCERDKIWYPVSKTLAEKA 548
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ Y +D+V I PS +GPLLQP +N S V L ++G Q+ + V V DV
Sbjct: 549 AWEYTNTHKMDMVAIHPSTCLGPLLQPRLNASSGVLLQLLQGTQDTQSNHWLGCVHVADV 728
Query: 502 AGALLLAYENLQASGRYLCSSPAI 431
A A +L YE ASGRYLC++ I
Sbjct: 729 AKAQILLYETPSASGRYLCTNGII 800
>gb|DR017730.1|DR017730 STRS1_18_D04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_D04_A034 3', mRNA sequence
Length = 812
Score = 130 bits (279), Expect = 1e-029
Identities = 53/135 (39%), Positives = 82/135 (60%)
Frame = -2 / +2
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E+ WS+ +YC++ + WY KT+AE A+ A GLD+V + P +V+GP+LQ ++N S+
Sbjct: 77 ENCWSNLDYCKETKNWYCYGKTVAEKAAWERAKDKGLDLVVVNPCVVLGPVLQSSINASI 256
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
L Y+ G + + + V VRDVA A +L YE+ ASGRYLC+ + D+V++L
Sbjct: 257 IHILKYLTGSAKTYANSVQAYVHVRDVAEAHILVYESPSASGRYLCAESVLHRGDVVDLL 436
Query: 403 KTEYPTYTYPQKFVE 359
+ +P Y P K E
Sbjct: 437 ASMFPQYPIPTKVKE 481
>gb|DR052722.1|DR052722 RTCA1_6_A09.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_6_A09_A029 5', mRNA sequence
Length = 904
Score = 84.5 bits (178), Expect(3) = 1e-029
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = -2 / -3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +SD EYC++ + WY LSKTLAE A+ +A + G+D+VTI P++VIG LLQP +NTS
Sbjct: 890 ETWFSDVEYCKQAKAWYQLSKTLAEETAWKFAKEKGIDLVTINPAMVIGRLLQPTLNTSC 711
Query: 583 KVFLSYIKG 557
L + G
Sbjct: 710 AAILQLMNG 684
Score = 49.2 bits (101), Expect(3) = 1e-029
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = -2 / -3
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVE 359
V V+DVA A +LA+E A+GRYL S+IV IL YP T P K V+
Sbjct: 650 VSVKDVAEAHILAFEVPSANGRYLLVEKVAHYSEIVKILGKLYPGCTLPTKCVD 489
Score = 34.5 bits (69), Expect(3) = 1e-029
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -2 / -3
Query: 343 TYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN 239
T + E++ KLG P+E+ LRD++E + +LN
Sbjct: 464 TVSKERIEKLGLKYTPIEEALRDTVESLKEKKLLN 360
>gb|BF610086.1|BF610086 NXSI_054_E12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_054_E12 5' similar to Arabidopsis thaliana
sequence At5g58490 cinnamoyl-CoA reductase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 490
Score = 129 bits (277), Expect = 2e-029
Identities = 58/156 (37%), Positives = 83/156 (53%)
Frame = -2 / +3
Query: 850 EAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAY 671
+AK KR + +P+WP E+ W+D +YC++N WY SKTLAE A+ +
Sbjct: 3 KAKVKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKAAWDF 182
Query: 670 AAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGAL 491
A +TGLD+V I P V+GP+L PA+N S+ +FL ++G E ++ V DVA
Sbjct: 183 AKETGLDVVVINPGTVMGPILPPAINASMAMFLQLLQGGTEGYQNNHMGCVHXXDVAXXH 362
Query: 490 LLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
+L YE AS LC SD ++ YP Y
Sbjct: 363 ILLYETPSASXXXLCVEATNHWSDFAEMVAKLYPEY 470
>gb|DR684650.1|DR684650 EST1074727 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAV12 3' end, mRNA sequence
Length = 796
Score = 85.8 bits (181), Expect(3) = 2e-029
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = -2 / +1
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +SD EYC++ + WY LSKTLAE A+ + + G+D+VTI P++VIG LLQP +NTS
Sbjct: 211 ETWFSDAEYCKQTKAWYQLSKTLAEETAWKFVKEKGIDVVTINPAMVIGTLLQPTLNTSC 390
Query: 583 KVFLSYIKG 557
L + G
Sbjct: 391 AAILQIMNG 417
Score = 45.1 bits (92), Expect(3) = 2e-029
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -2 / +1
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
V V+DVA A +LA+E A+GRYL +S+IV L YP P K
Sbjct: 451 VSVKDVANAHILAFEVPSANGRYLLVERVAHLSEIVKTLSKLYPGCALPTK 603
Score = 36.3 bits (73), Expect(3) = 2e-029
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2 / +1
Query: 343 TYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGILN 239
T + EK+ KLG P+E+ LRD++E + +LN
Sbjct: 637 TVSKEKIEKLGLNYTPIEEALRDTVESLKEKKLLN 741
>gb|AL750311.1|AL750311 AL750311 RN Pinus pinaster cDNA clone RN01A04 similar to CINNAMOYL
COA REDUCTASE, mRNA sequence
Length = 419
Score = 129 bits (276), Expect = 3e-029
Identities = 56/138 (40%), Positives = 82/138 (59%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A +AK KR + +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 5 QAAQKAKVKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKA 184
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGLD+V I P V+GP+L PA+N S+ +FL ++G E ++ V V+DV
Sbjct: 185 AWDFAKETGLDVVVINPGTVMGPILPPAINASMAMFLQLLQGGTEAYQNFYMGCVHVKDV 364
Query: 502 AGALLLAYENLQASGRYL 449
A +L YE ASGR+L
Sbjct: 365 AEGHILLYETPSASGRHL 418
>gb|AL750312.1|AL750312 AL750312 RN Pinus pinaster cDNA clone RN01A05 similar to CINNAMOYL
COA REDUCTASE, mRNA sequence
Length = 444
Score = 129 bits (276), Expect = 3e-029
Identities = 56/138 (40%), Positives = 82/138 (59%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A +AK KR + +P+WP E+ W+D +YC++N WY SKTLAE
Sbjct: 5 QAAQKAKVKRLVLTSSISAIIPSPNWPADLPKDENCWTDLDYCKENGIWYPASKTLAEKA 184
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ +A +TGLD+V I P V+GP+L PA+N S+ +FL ++G E ++ V V+DV
Sbjct: 185 AWDFAKETGLDVVVINPGTVMGPILPPAINASMAMFLQLLQGGTEAYQNFYMGCVHVKDV 364
Query: 502 AGALLLAYENLQASGRYL 449
A +L YE ASGR+L
Sbjct: 365 AEGHILLYETPSASGRHL 418
>gb|CF472400.1|CF472400 RTDS1_9_F04.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_9_F04_A015 5', mRNA sequence
Length = 776
Score = 127 bits (272), Expect = 1e-028
Identities = 52/135 (38%), Positives = 81/135 (60%)
Frame = -2 / -1
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E+ WS+ +YC++ + WY K +AE A+ A GLD+V + P +V+GP+LQ ++N S+
Sbjct: 704 ENCWSNLDYCKETKNWYCYGKPVAEKAAWERAKDKGLDLVVVNPCVVLGPVLQSSINASI 525
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
L Y+ G + + + V VRDVA A +L YE+ ASGRYLC+ + D+V++L
Sbjct: 524 IHILKYLTGSVKTYANSVQAYVHVRDVAEAHILVYESPSASGRYLCAESVLHRGDVVDLL 345
Query: 403 KTEYPTYTYPQKFVE 359
+ +P Y P K E
Sbjct: 344 ASMFPQYPIPTKVKE 300
>gb|DR387793.1|DR387793 RTHG1_24_E03.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_24_E03_A029 3', mRNA sequence
Length = 700
Score = 122 bits (262), Expect = 2e-027
Identities = 50/128 (39%), Positives = 77/128 (60%)
Frame = -2 / +2
Query: 742 EYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYI 563
+YC++ + WY KT+AE A+ A GLD+V + P +V+GP+LQ ++N S+ L Y+
Sbjct: 56 DYCKETKNWYCYGKTVAEKAAWERAKDKGLDLVVVNPCVVLGPVLQSSINASIIHILKYL 235
Query: 562 KGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
G + + + V VRDVA A +L YE+ ASGRYLC+ + D+V++L + +P Y
Sbjct: 236 TGSAKTYANSVQAYVHVRDVAEAHILVYESPSASGRYLCAESVLHRGDVVDLLASMFPQY 415
Query: 382 TYPQKFVE 359
P K E
Sbjct: 416 PIPTKVKE 439
>gb|DR691625.1|DR691625 EST1081712 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADA80 3' end, mRNA sequence
Length = 856
Score = 122 bits (260), Expect = 5e-027
Identities = 48/135 (35%), Positives = 78/135 (57%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A ++AK +R + NP WP G+ E+ W+D +YCR+N WY ++KTLAE
Sbjct: 421 EAAHKAKVRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKA 600
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A+ ++ + GLD+V I P +GP+L P +N S+ + + ++G E ++ V+D+
Sbjct: 601 AWEFSKEKGLDVVAINPGTALGPILPPEMNASLAMIVKLLQGSNEEYRNFFMGCAHVKDI 780
Query: 502 AGALLLAYENLQASG 458
A A +L YE LQ G
Sbjct: 781 AKAQILLYERLQPLG 825
>gb|CO164049.1|CO164049 FLD1_45_B03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_B03_A029 5', mRNA sequence
Length = 750
Score = 121 bits (259), Expect = 6e-027
Identities = 55/127 (43%), Positives = 75/127 (59%)
Frame = -2 / +1
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E+SW+D EYC +++ WY +SKTLAE A+ Y +D+V I PS +GPLLQP +N S
Sbjct: 118 ENSWTDIEYCERDKIWYPVSKTLAEKAAWEYTNTHKMDMVAIHPSTCLGPLLQPRLNASS 297
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
V L ++G Q+ + V V DVA A +L YE ASGRYLC++ I SD ++
Sbjct: 298 GVLLQLLQGTQDTQSNYWLGCVHVADVAKAQILLYETPSASGRYLCTNGIIHFSDFAEVV 477
Query: 403 KTEYPTY 383
P Y
Sbjct: 478 AKICPEY 498
>gb|AW056808.1|AW056808 ST56D11 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST56D11, mRNA sequence
Length = 458
Score = 120 bits (257), Expect = 1e-026
Identities = 49/137 (35%), Positives = 77/137 (56%)
Frame = -2 / +1
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
A ++AK +R + NP WP G+ E+ W+D +YCR+N WY ++KTLAE A
Sbjct: 1 AAHKAKVRRVVLTSSISAIIPNPKWPAGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAA 180
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ ++ + GLD+V I P +GP+L P +N S+ + + ++G E ++ V D+A
Sbjct: 181 WEFSKEKGLDVVAINPGTALGPILPPEMNASLAMIVKLLQGSNEEYRNFFMGCAHVXDIA 360
Query: 499 GALLLAYENLQASGRYL 449
A +L YE ASG L
Sbjct: 361 KAQILLYETPSASGXXL 411
>gb|DR386732.1|DR386732 RTHG1_17_D02.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_17_D02_A029 3', mRNA sequence
Length = 890
Score = 81.3 bits (171), Expect(2) = 2e-026
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = -2 / +3
Query: 622 IGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCS 443
+GP+LQ ++N S+ L Y+ G + + + V VRDVA A +L YE+ ASGRYLC+
Sbjct: 300 LGPVLQSSINASIIHILKYLTGSAKTYANSVQAYVHVRDVAEAHILVYESPSASGRYLCA 479
Query: 442 SPAIRVSDIVNILKTEYPTYTYPQKFVE 359
+ D+V++L + +P Y P K E
Sbjct: 480 ESVLHRGDVVDLLASMFPQYPIPTKVKE 563
Score = 58.3 bits (121), Expect(2) = 2e-026
Identities = 26/81 (32%), Positives = 39/81 (48%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
AC A R V+ +P E+ WS+ +YC++ + WY KT+AE A
Sbjct: 62 ACAVAGVHRVVFTSSIGAVYMDPSRDYDALVDENCWSNLDYCKETKNWYCYGKTVAEKAA 241
Query: 679 FAYAAKTGLDIVTICPSLVIG 617
+ A GLD+V + P +V G
Sbjct: 242 WERAKDKGLDLVVVNPCVVFG 304
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 436,017,084
Number of Sequences: 355925
Number of extensions: 6246212
Number of successful extensions: 68588
Number of sequences better than 1.0e-020: 88
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 12670646575
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)