TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3191506.2.1
(1208 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR686620.1|DR686620 EST1076698 Normalized pine embryo li... 366 e-100
gb|DT633664.1|DT633664 EST1148595 Normalized pine embryo li... 366 e-100
gb|DR022585.1|DR022585 STRS1_52_C09.b1_A034 Shoot tip pitch... 136 4e-084
gb|DT633602.1|DT633602 EST1148533 Normalized pine embryo li... 148 6e-062
gb|DR686821.1|DR686821 EST1076899 Normalized pine embryo li... 148 6e-062
gb|DR744317.1|DR744317 RTCU1_21_E03.g1_A029 Roots plus adde... 115 7e-048
gb|CX713339.1|CX713339 RTPQ1_8_B07.g1_A032 Roots treated wi... 150 3e-045
gb|DR169155.1|DR169155 RTPHOS1_30_A06.g1_A029 Roots minus p... 142 8e-043
gb|DR692110.1|DR692110 EST1082197 Normalized pine embryo li... 145 7e-041
gb|DT637161.1|DT637161 EST1152092 Normalized pine embryo li... 145 9e-041
gb|BQ655460.1|BQ655460 NXRV094_H04_F NXRV (Nsf Xylem Root w... 127 4e-038
gb|DR053011.1|DR053011 RTCA1_8_A01.g1_A029 Roots minus calc... 150 9e-038
gb|BQ699412.1|BQ699412 NXRV127_E03_F NXRV (Nsf Xylem Root w... 104 1e-036
gb|DR109571.1|DR109571 RTS1_3_E05.b1_A029 Roots minus sulfu... 149 3e-035
gb|DR161477.1|DR161477 RTFE1_12_B06.b1_A029 Roots minus iro... 147 1e-034
gb|DR689244.1|DR689244 EST1079330 Normalized pine embryo li... 146 3e-034
gb|DT635347.1|DT635347 EST1150278 Normalized pine embryo li... 146 3e-034
gb|BQ107024.1|BQ107024 NXLV085_F11_F NXLV (Nsf Xylem Late w... 138 6e-034
gb|BQ197959.1|BQ197959 NXLV123_C04_F NXLV (Nsf Xylem Late w... 139 4e-032
gb|CO364079.1|CO364079 RTK1_13_C05.g1_A029 Roots minus pota... 137 2e-031
gb|DR112556.1|DR112556 RTS1_29_B07.b1_A029 Roots minus sulf... 135 5e-031
gb|BF221350.1|BF221350 NXCI_157_F07_F NXCI (Nsf Xylem Compr... 108 5e-028
gb|BQ697933.1|BQ697933 NXPV_062_F07_F NXPV (Nsf Xylem Plani... 108 3e-025
gb|BF010558.1|BF010558 NXCI_086_A04_F NXCI (Nsf Xylem Compr... 98 5e-025
gb|BX254765.1|BX254765 BX254765 Pinus pinaster differenciat... 82 1e-024
gb|BG673827.1|BG673827 NXPV_075_F03_F NXPV (Nsf Xylem Plani... 102 4e-021
gb|BQ698491.1|BQ698491 NXPV_070_E11_F NXPV (Nsf Xylem Plani... 102 6e-021
>gb|DR686620.1|DR686620 EST1076698 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABI03 3' end, mRNA sequence
Length = 866
Score = 366 bits (793), Expect = e-100
Identities = 149/162 (91%), Positives = 153/162 (94%)
Frame = +3 / +2
Query: 672 AASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWLNS 851
AASVVVNSTIMNAKE EKHVFHLVTDKLNFGAM MWFLLNPPG A IHVENVDDFKWLNS
Sbjct: 2 AASVVVNSTIMNAKESEKHVFHLVTDKLNFGAMKMWFLLNPPGKAAIHVENVDDFKWLNS 181
Query: 852 SYCPVLKQLESAAMKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLN 1031
SYCPVL+QLESAAMKEYYFKAD P TLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKL+
Sbjct: 182 SYCPVLRQLESAAMKEYYFKADHPTTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLD 361
Query: 1032 KILFLDDDIVVQRDLTGLWEVDLNGNVNGAVETCGESFHRFD 1157
KILFLDDDIVVQ+DLT LW VDL+G VNGAVETCGESFHRFD
Sbjct: 362 KILFLDDDIVVQKDLTPLWSVDLHGKVNGAVETCGESFHRFD 487
Score = 279 bits (603), Expect = 3e-074
Identities = 128/162 (79%), Positives = 137/162 (84%)
Frame = -2 / -3
Query: 1156 SNR*KLSPHVSTAPFTFPLRSTSQSPVRSLWTTISSSRKRILFSLG*TCGR*NLR*LSMD 977
SNR*KLSP VSTAP TFP RST V+S TTISSS+KRIL SLG*TCGR* R* SMD
Sbjct: 486 SNR*KLSPQVSTAPLTFP*RSTDHKGVKSFCTTISSSKKRILSSLG*TCGR*KRR*FSMD 307
Query: 976 KYFGFRYFRLEEPAESVFGRSALK*YSFMAADSSCFRTGQ*EEFNHLKSSTFSTWIVASP 797
KYFGF YF+LEEPAESV G SALK*YSF+AADSS RTGQ*+E +HLKSSTFST I A P
Sbjct: 306 KYFGFLYFKLEEPAESVVG*SALK*YSFIAADSSWRRTGQ*DELSHLKSSTFSTCIAAFP 127
Query: 796 GGFSKNHMFMAPKFSLSVTR*NTCFSGSLAFMMVELTTTDAA 671
GG SKNH+FMAPKF+LSVTR*NTCFS SLAFM+VE TTTDAA
Sbjct: 126 GGLSKNHIFMAPKFNLSVTR*NTCFSDSLAFMIVEFTTTDAA 1
Score = 192 bits (414), Expect = 4e-048
Identities = 83/161 (51%), Positives = 111/161 (68%)
Frame = -1 / -2
Query: 1157 IKSVKTLSTCFHGSIYISIKINLPESS*VPLDNYIIIQEKNFIQLGIDLWEVKS*MIEHG 978
+K VK ST FH +I +S+KI P+ + L + IIIQEK+ +Q GI+LW++++ MI HG
Sbjct: 487 VKPVKAFSTSFHCTINLSMKIY*PQGRQIFLHHNIIIQEKDLVQFGINLWKIETKMI*HG 308
Query: 977 QIFWVSILQIRRTSRECFRTISLEIIFFHGCRLKLLQNRAVRRV*PFEVINIFHMDCCIP 798
IFW+SI QI T EC R I LEII FH C KL +NRA+ R+ PF++INIF+M P
Sbjct: 307 *IFWISIFQIGGTC*ECSRVICLEIILFHSCGFKLAKNRAIGRIEPFKIINIFYMYRSFP 128
Query: 797 RWIQQKPHVHGPKVQFVSNKMKYMFFRLLSIHDG*VDHN*C 675
I+ KPH HGPK+ V ++MKYMF R LSIHD *+ ++ C
Sbjct: 127 WGIK*KPHFHGPKI*LVCDEMKYMFLRFLSIHDS*IHNHRC 5
Score = 155 bits (332), Expect = 8e-037
Identities = 78/162 (48%), Positives = 99/162 (61%)
Frame = +2 / +1
Query: 671 GSISCGQLNHHEC*GA*KTCISSCY*QTELWGHEHVVFAESTWGCNNPCGKC**LQMVKL 850
G I + N+HEC*G *+TCISS + Q + WGHE+VVF S + C KC** M +
Sbjct: 1 GCICGCEFNYHEC*GI*ETCISSRHRQVKFWGHENVVFT*SPRESCDTCRKC**F*MAQF 180
Query: 851 FLLPCSEAA*VCSHERILFQG*SSENTLCWFF*SEVSKPKIFVHAQSSKILPPTSLSQAE 1030
LLPCS *+ S+ER+LFQG S + TL F E+ K KIF+HA+SS L TSLSQ
Sbjct: 181 VLLPCSSPT*IRSYERVLFQGRSPDYTLSRFLQFEI*KSKIFIHAKSSSFLSSTSLSQTG 360
Query: 1031 *NSFPG**YSCPEGPNWTLGG*S*WKCKWSRGNMWREFSPI* 1156
+ F G**Y E + + S WK W GN+WR+ SP+*
Sbjct: 361 QDPFLG**YCGAERFDALVVSRSSWKG*WCSGNLWRKLSPV* 486
Score = 123 bits (264), Expect = 2e-027
Identities = 74/154 (48%), Positives = 83/154 (53%)
Frame = +1 / +3
Query: 694 QPS*MLRSLKNMYFIXXXXXXXXGP*TCGFC*IHLGMQQSMWKMLMTSNGXXXXXXXXXX 873
Q S*MLR+L+NMYFI GP* CGF I G + M KMLM NG
Sbjct: 24 QLS*MLRNLRNMYFISSQTS*ILGP*KCGFYLIPQGKLRYM*KMLMILNGSIRPIALFFA 203
Query: 874 XXXXQP*KNIISRLIVRKHSLLVLLI*SIETQNICPCSII*DFTSHKSIPS*IKFFSWMM 1053
Q *K+IISR I R HS V I*+IE QNI PC II HK IP+ + FSWMM
Sbjct: 204 NLNPQL*KSIISRQITRLHSQQVPPI*NIEIQNIYPC*IIFVSIFHKFIPNWTRSFSWMM 383
Query: 1054 I*LSRGT*LDSGRLILMEM*MEPWKHVERVFTDL 1155
I R * G+ I ME M WK VE+ FT L
Sbjct: 384 ILWCRKI*RPCGQ*IFMERLMVQWKLVEKAFTGL 485
Score = 88.1 bits (186), Expect(2) = 1e-025
Identities = 42/85 (49%), Positives = 51/85 (60%)
Frame = -3 / -1
Query: 1068 SGQLYHHPGKEFYSAWDRLVGGKILDD*AWTNILGFDTSD*KNQQRVFSDDQP*NNILSW 889
S YHHP K WD+LV + DD AW NIL F S+ +N RV S D P*NN LS
Sbjct: 398 SAPQYHHPRKGSCPVWDKLVEDRNEDDLAWINILDFYISNWRNLLRV*SGDLP*NNTLS* 219
Query: 888 LQTQAASEQGSKKSLTI*SHQHFPH 814
L+ Q EQG++ + I*+HQHF H
Sbjct: 218 LRIQVGEEQGNRTN*AI*NHQHFLH 144
Score = 49.2 bits (101), Expect(2) = 1e-025
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = -3 / -1
Query: 792 DSAKTTCSWPQSSVCQ*QDEIHVFQAP*HS*WLS 691
D KTT SWPQ+ C *+DEIHV Q P*HS* L+
Sbjct: 122 D*VKTTFSWPQNLTCL*RDEIHVSQIP*HS**LN 21
>gb|DT633664.1|DT633664 EST1148595 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFX37 3' end, mRNA sequence
Length = 812
Score = 366 bits (793), Expect = e-100
Identities = 149/162 (91%), Positives = 153/162 (94%)
Frame = +3 / +1
Query: 672 AASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWLNS 851
AASVVVNSTIMNAKE EKHVFHLVTDKLNFGAM MWFLLNPPG A IHVENVDDFKWLNS
Sbjct: 10 AASVVVNSTIMNAKESEKHVFHLVTDKLNFGAMKMWFLLNPPGKAAIHVENVDDFKWLNS 189
Query: 852 SYCPVLKQLESAAMKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLN 1031
SYCPVL+QLESAAMKEYYFKAD P TLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKL+
Sbjct: 190 SYCPVLRQLESAAMKEYYFKADHPTTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLD 369
Query: 1032 KILFLDDDIVVQRDLTGLWEVDLNGNVNGAVETCGESFHRFD 1157
KILFLDDDIVVQ+DLT LW VDL+G VNGAVETCGESFHRFD
Sbjct: 370 KILFLDDDIVVQKDLTPLWSVDLHGKVNGAVETCGESFHRFD 495
Score = 279 bits (603), Expect = 3e-074
Identities = 128/162 (79%), Positives = 137/162 (84%)
Frame = -2 / -1
Query: 1156 SNR*KLSPHVSTAPFTFPLRSTSQSPVRSLWTTISSSRKRILFSLG*TCGR*NLR*LSMD 977
SNR*KLSP VSTAP TFP RST V+S TTISSS+KRIL SLG*TCGR* R* SMD
Sbjct: 494 SNR*KLSPQVSTAPLTFP*RSTDHKGVKSFCTTISSSKKRILSSLG*TCGR*KRR*FSMD 315
Query: 976 KYFGFRYFRLEEPAESVFGRSALK*YSFMAADSSCFRTGQ*EEFNHLKSSTFSTWIVASP 797
KYFGF YF+LEEPAESV G SALK*YSF+AADSS RTGQ*+E +HLKSSTFST I A P
Sbjct: 314 KYFGFLYFKLEEPAESVVG*SALK*YSFIAADSSWRRTGQ*DELSHLKSSTFSTCIAAFP 135
Query: 796 GGFSKNHMFMAPKFSLSVTR*NTCFSGSLAFMMVELTTTDAA 671
GG SKNH+FMAPKF+LSVTR*NTCFS SLAFM+VE TTTDAA
Sbjct: 134 GGLSKNHIFMAPKFNLSVTR*NTCFSDSLAFMIVEFTTTDAA 9
Score = 192 bits (414), Expect = 4e-048
Identities = 83/161 (51%), Positives = 111/161 (68%)
Frame = -1 / -3
Query: 1157 IKSVKTLSTCFHGSIYISIKINLPESS*VPLDNYIIIQEKNFIQLGIDLWEVKS*MIEHG 978
+K VK ST FH +I +S+KI P+ + L + IIIQEK+ +Q GI+LW++++ MI HG
Sbjct: 495 VKPVKAFSTSFHCTINLSMKIY*PQGRQIFLHHNIIIQEKDLVQFGINLWKIETKMI*HG 316
Query: 977 QIFWVSILQIRRTSRECFRTISLEIIFFHGCRLKLLQNRAVRRV*PFEVINIFHMDCCIP 798
IFW+SI QI T EC R I LEII FH C KL +NRA+ R+ PF++INIF+M P
Sbjct: 315 *IFWISIFQIGGTC*ECSRVICLEIILFHSCGFKLAKNRAIGRIEPFKIINIFYMYRSFP 136
Query: 797 RWIQQKPHVHGPKVQFVSNKMKYMFFRLLSIHDG*VDHN*C 675
I+ KPH HGPK+ V ++MKYMF R LSIHD *+ ++ C
Sbjct: 135 WGIK*KPHFHGPKI*LVCDEMKYMFLRFLSIHDS*IHNHRC 13
Score = 155 bits (332), Expect = 8e-037
Identities = 78/162 (48%), Positives = 99/162 (61%)
Frame = +2 / +3
Query: 671 GSISCGQLNHHEC*GA*KTCISSCY*QTELWGHEHVVFAESTWGCNNPCGKC**LQMVKL 850
G I + N+HEC*G *+TCISS + Q + WGHE+VVF S + C KC** M +
Sbjct: 9 GCICGCEFNYHEC*GI*ETCISSRHRQVKFWGHENVVFT*SPRESCDTCRKC**F*MAQF 188
Query: 851 FLLPCSEAA*VCSHERILFQG*SSENTLCWFF*SEVSKPKIFVHAQSSKILPPTSLSQAE 1030
LLPCS *+ S+ER+LFQG S + TL F E+ K KIF+HA+SS L TSLSQ
Sbjct: 189 VLLPCSSPT*IRSYERVLFQGRSPDYTLSRFLQFEI*KSKIFIHAKSSSFLSSTSLSQTG 368
Query: 1031 *NSFPG**YSCPEGPNWTLGG*S*WKCKWSRGNMWREFSPI* 1156
+ F G**Y E + + S WK W GN+WR+ SP+*
Sbjct: 369 QDPFLG**YCGAERFDALVVSRSSWKG*WCSGNLWRKLSPV* 494
Score = 123 bits (264), Expect = 2e-027
Identities = 74/154 (48%), Positives = 83/154 (53%)
Frame = +1 / +2
Query: 694 QPS*MLRSLKNMYFIXXXXXXXXGP*TCGFC*IHLGMQQSMWKMLMTSNGXXXXXXXXXX 873
Q S*MLR+L+NMYFI GP* CGF I G + M KMLM NG
Sbjct: 32 QLS*MLRNLRNMYFISSQTS*ILGP*KCGFYLIPQGKLRYM*KMLMILNGSIRPIALFFA 211
Query: 874 XXXXQP*KNIISRLIVRKHSLLVLLI*SIETQNICPCSII*DFTSHKSIPS*IKFFSWMM 1053
Q *K+IISR I R HS V I*+IE QNI PC II HK IP+ + FSWMM
Sbjct: 212 NLNPQL*KSIISRQITRLHSQQVPPI*NIEIQNIYPC*IIFVSIFHKFIPNWTRSFSWMM 391
Query: 1054 I*LSRGT*LDSGRLILMEM*MEPWKHVERVFTDL 1155
I R * G+ I ME M WK VE+ FT L
Sbjct: 392 ILWCRKI*RPCGQ*IFMERLMVQWKLVEKAFTGL 493
Score = 88.1 bits (186), Expect(2) = 7e-026
Identities = 42/85 (49%), Positives = 51/85 (60%)
Frame = -3 / -2
Query: 1068 SGQLYHHPGKEFYSAWDRLVGGKILDD*AWTNILGFDTSD*KNQQRVFSDDQP*NNILSW 889
S YHHP K WD+LV + DD AW NIL F S+ +N RV S D P*NN LS
Sbjct: 406 SAPQYHHPRKGSCPVWDKLVEDRNEDDLAWINILDFYISNWRNLLRV*SGDLP*NNTLS* 227
Query: 888 LQTQAASEQGSKKSLTI*SHQHFPH 814
L+ Q EQG++ + I*+HQHF H
Sbjct: 226 LRIQVGEEQGNRTN*AI*NHQHFLH 152
Score = 50.1 bits (103), Expect(2) = 7e-026
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = -3 / -2
Query: 792 DSAKTTCSWPQSSVCQ*QDEIHVFQAP*HS*WLS*PQLMLP 670
D KTT SWPQ+ C *+DEIHV Q P*HS* L+ M P
Sbjct: 130 D*VKTTFSWPQNLTCL*RDEIHVSQIP*HS**LNSQPQMQP 8
>gb|DR022585.1|DR022585 STRS1_52_C09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_C09_A034 3', mRNA sequence
Length = 879
Score = 136 bits (291), Expect(5) = 4e-084
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +3 / -3
Query: 357 ASDRTKAMGQVLSKARDLLYDCKEITQRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPN 536
A ++ KAMG VLSKA + YDC EIT++LRAMLQS D+QVR+LKKQS FL QLAAKT+P
Sbjct: 523 APEKIKAMGHVLSKAEEQFYDCGEITKKLRAMLQSTDKQVRTLKKQSAFLGQLAAKTVPK 344
Query: 537 GIHCLSMRLTIDYYLLSPEKRKF 605
G+HC SM LT+DYYLL+ EK+ F
Sbjct: 343 GLHCFSM*LTMDYYLLAIEKKNF 275
Score = 105 bits (225), Expect(5) = 4e-084
Identities = 47/82 (57%), Positives = 61/82 (74%)
Frame = +3 / -3
Query: 45 RKKMEVXQQDDEALVKLENAGIERSKAVDSAVLGKYSIWRRENENEKADSRVRLMRDQMI 224
RK QD+E V++ENA I+RSK VDS VLGKY+I RRENENE + S VRLMRD +I
Sbjct: 877 RKFNRADSQDEEK*VEIENAAIKRSKEVDSIVLGKYNISRRENENENSYSTVRLMRDPLI 698
Query: 225 MARIYSVLAKSRDKLDLYQELL 290
MAR+YS +++R+ +DLY L+
Sbjct: 697 MARVYSSTSQARNNIDLYH*LM 632
Score = 83.5 bits (176), Expect(4) = 8e-040
Identities = 44/87 (50%), Positives = 54/87 (62%)
Frame = -2 / +3
Query: 637 RSGFSRFSLFGNFLFSGERR**SIVKRMERQWMPFGIVLAASWLRKVLCFFKLRTCSSAD 458
+S + LF F FS +**S+V ME+Q PFG V AAS + LCFFK+ TC S D
Sbjct: 243 KSWILQLVLFRKFFFSMASK**SMVNHMEKQCKPFGTVFAAS*PKNALCFFKVLTCLSVD 422
Query: 457 *SIALKRWVISLQSYNRSLAFDKTWPI 377
*S+A +VIS QS N S A D+T PI
Sbjct: 423 *SMARNFFVISPQS*NCSSALDRT*PI 503
Score = 82.2 bits (173), Expect(4) = 8e-040
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = -2 / +3
Query: 241 EYILAMII*SRIKRTLESAFSFSFSRLQMLYFPSTAESTAFERSIPAFSSLTNASSSC 68
EY LAMI SRI T+E FSFSFSRL+MLYFP T EST+ ER I AFS T+ SSSC
Sbjct: 681 EYTLAMISGSRINLTVE*EFSFSFSRLEMLYFPRTIESTSLERLIAAFSISTHFSSSC 854
Score = 77.6 bits (163), Expect(5) = 4e-084
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +3 / -2
Query: 594 KRKFPNSENLENPDLYHYALFSDNVLAASVVVNSTIMNAK 713
K KFP + LE+P LYHYALFSDNVLAA VVVNSTIMNAK
Sbjct: 287 KEKFPKKDKLEDPTLYHYALFSDNVLAACVVVNSTIMNAK 168
Score = 58.3 bits (121), Expect(4) = 1e-033
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = -1 / +2
Query: 287 QLLIEIKLVPRFGKNRIYSGHDHLISHQTDP*ICLFIFIFTSPDAVFSQHSRVNSF*TFD 108
QL++ I ++P G I+ HD +SHQ++ + + + I + VFSQ +R+ TF+
Sbjct: 635 QLMV*INIIPSLGSA*IHPSHDQWVSHQSNSGVRILVLILPPRNVVFSQDNRIYLLGTFN 814
Query: 107 TCILKFN*RFIIL 69
CI N F IL
Sbjct: 815 CCIFNLNSFFFIL 853
Score = 54.7 bits (113), Expect(4) = 1e-033
Identities = 28/78 (35%), Positives = 44/78 (56%)
Frame = -1 / +2
Query: 584 EKIIINR*AHGKTMDAIWDCLSC*LAKEGALLLQAPDLLIC*LKHCSQTLGNFLAIVQ*I 405
+++II+ +HGKT+ A+ + L C L + LL Q P LL+C LKH SQ L F +++
Sbjct: 296 KQVIIHGQSHGKTVQALRNSLCCQLT*KCTLLFQGPYLLVCRLKHGSQLLRYFPTVIKLF 475
Query: 404 PCF**NLAHCFGSIRSTL 351
*++ H +R L
Sbjct: 476 FSLG*DMTHSLNLLRCIL 529
Score = 52.8 bits (109), Expect(4) = 1e-033
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = -2 / +1
Query: 715 SLAFMMVELTTTDAAKTLSEKRA*W*RSGFSRFSLFGNFLF 593
+LAFM+VE TTT AA TLSE A* *R G S S GNF F
Sbjct: 166 TLAFMIVEFTTTHAANTLSENNA***RVGSSNLSFLGNFSF 288
Score = 41.8 bits (85), Expect(5) = 4e-084
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3 / -1
Query: 714 EPEKHVFHLVTDKLNFGA 767
E KHVFHLVTDKLNFGA
Sbjct: 57 ESHKHVFHLVTDKLNFGA 4
Score = 35.9 bits (72), Expect(4) = 8e-040
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -3 / +3
Query: 768 WPQSSVCQ*QDEIHVFQAP 712
WPQ+ +C *+DEIHV++ P
Sbjct: 3 WPQNLICL*RDEIHVYEIP 59
Score = 33.6 bits (67), Expect(4) = 1e-033
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -2 / +2
Query: 769 MAPKFSLSVTR*NTC 725
+APKF+LSVTR*NTC
Sbjct: 2 VAPKFNLSVTR*NTC 46
Score = 27.2 bits (53), Expect(5) = 4e-084
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3 / -3
Query: 297 LKESQRSLGEATADAELPK 353
+KE R+LGEA D++LP+
Sbjct: 622 IKEC*RTLGEANVDSDLPQ 566
Score = 25.8 bits (50), Expect(4) = 8e-040
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3 / +2
Query: 717 AP*HS*WLS*PQLMLPKHCPRKEHNGKDQDFP 622
+P*HS* L+ P HC + H+ K+ D P
Sbjct: 164 SP*HS**LNSQPHTQPIHCQKIMHSDKELDPP 259
>gb|DT633602.1|DT633602 EST1148533 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFW66 3' end, mRNA sequence
Length = 879
Score = 148 bits (318), Expect(3) = 6e-062
Identities = 57/96 (59%), Positives = 77/96 (80%)
Frame = +3 / +3
Query: 624 ENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGD 803
E+P+LYHYA+FSDNV+AASVVVNS + NAKEP KHVFH+VTDK+N AM +WF +
Sbjct: 192 EDPNLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLAAMQVWFKMRSLNG 371
Query: 804 ATIHVENVDDFKWLNSSYCPVLKQLESAAMKEYYFK 911
+ + V+ V+D+K+LNSSY PVL+QLE A ++ +YF+
Sbjct: 372 SHVEVKAVEDYKFLNSSYVPVLRQLEPANLQRFYFE 479
Score = 82.6 bits (174), Expect(3) = 6e-062
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +3 / +2
Query: 939 GSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGL 1085
G S ++RNPKYLSMLNHLRFYLP++YPK +++LFLDDD+VV G+
Sbjct: 503 GCS*YEFRNPKYLSMLNHLRFYLPEMYPKSHRVLFLDDDVVVSEGPDGI 649
Score = 75.8 bits (159), Expect(5) = 6e-029
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = -2 / -3
Query: 781 NHMFMAPKFSLSVTR*NTCFSGSLAFMMVELTTTDAAKTLSEKRA*W*RSGFS 623
N +A +F LSVT *NTCF GSLAF+ ELTTT+AA TLSE A*W*R G S
Sbjct: 349 NQTCIAARFILSVTT*NTCFQGSLAFLTAELTTTEAAMTLSENMA*W*RLGSS 191
Score = 46.4 bits (95), Expect(3) = 6e-062
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3 / +3
Query: 459 SADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRL 563
+ ++Q+ KK+ F S +AAK+IP IHCLSMRL
Sbjct: 24 AVNDQLTRAKKRGAFASLIAAKSIPKSIHCLSMRL 128
Score = 36.3 bits (73), Expect(5) = 6e-029
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2 / -3
Query: 1132 HVSTAPFTFPLRSTSQSPVRS 1070
HVSTAP TFP S S +PVRS
Sbjct: 697 HVSTAPLTFPSISISHNPVRS 635
Score = 32.7 bits (65), Expect(5) = 6e-029
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2 / -1
Query: 1063 TTISSSRKRILFSLG*TCGR*NLR*LSMDKYFGF 962
TT SSSR + G G+* R* +M++Y GF
Sbjct: 627 TTTSSSRNKTRCDFGYISGK*KRR*FNMERYLGF 526
Score = 30.9 bits (61), Expect(5) = 6e-029
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2 / -3
Query: 886 ADSSCFRTGQ*EEFNHLKSSTFST 815
A SSC +TG *EEF +L SST T
Sbjct: 454 AGSSCRKTGT*EEFKNL*SSTALT 383
Score = 24.9 bits (48), Expect(5) = 6e-029
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 571 SIVKRMERQWMPFGIVLAASWLRK 500
S + ++RQWM G+ LAA L K
Sbjct: 136 SSINLIDRQWMLLGMDLAAIKLAK 65
>gb|DR686821.1|DR686821 EST1076899 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABK22 3' end, mRNA sequence
Length = 742
Score = 148 bits (318), Expect(3) = 6e-062
Identities = 57/96 (59%), Positives = 77/96 (80%)
Frame = +3 / +1
Query: 624 ENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGD 803
E+P+LYHYA+FSDNV+AASVVVNS + NAKEP KHVFH+VTDK+N AM +WF +
Sbjct: 184 EDPNLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLAAMQVWFKMRSLNG 363
Query: 804 ATIHVENVDDFKWLNSSYCPVLKQLESAAMKEYYFK 911
+ + V+ V+D+K+LNSSY PVL+QLE A ++ +YF+
Sbjct: 364 SHVEVKAVEDYKFLNSSYVPVLRQLEPANLQRFYFE 471
Score = 82.6 bits (174), Expect(3) = 6e-062
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +3 / +3
Query: 939 GSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGL 1085
G S ++RNPKYLSMLNHLRFYLP++YPK +++LFLDDD+VV G+
Sbjct: 495 GCS*YEFRNPKYLSMLNHLRFYLPEMYPKSHRVLFLDDDVVVSEGPDGI 641
Score = 75.8 bits (159), Expect(5) = 6e-029
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = -2 / -3
Query: 781 NHMFMAPKFSLSVTR*NTCFSGSLAFMMVELTTTDAAKTLSEKRA*W*RSGFS 623
N +A +F LSVT *NTCF GSLAF+ ELTTT+AA TLSE A*W*R G S
Sbjct: 341 NQTCIAARFILSVTT*NTCFQGSLAFLTAELTTTEAAMTLSENMA*W*RLGSS 183
Score = 46.4 bits (95), Expect(3) = 6e-062
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 459 SADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRL 563
+ ++Q+ KK+ F S +AAK+IP IHCLSMRL
Sbjct: 16 AVNDQLTRAKKRGAFASLIAAKSIPKSIHCLSMRL 120
Score = 36.3 bits (73), Expect(5) = 6e-029
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2 / -3
Query: 1132 HVSTAPFTFPLRSTSQSPVRS 1070
HVSTAP TFP S S +PVRS
Sbjct: 689 HVSTAPLTFPSISISHNPVRS 627
Score = 32.7 bits (65), Expect(5) = 6e-029
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2 / -1
Query: 1063 TTISSSRKRILFSLG*TCGR*NLR*LSMDKYFGF 962
TT SSSR + G G+* R* +M++Y GF
Sbjct: 619 TTTSSSRNKTRCDFGYISGK*KRR*FNMERYLGF 518
Score = 30.9 bits (61), Expect(5) = 6e-029
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2 / -3
Query: 886 ADSSCFRTGQ*EEFNHLKSSTFST 815
A SSC +TG *EEF +L SST T
Sbjct: 446 AGSSCRKTGT*EEFKNL*SSTALT 375
Score = 24.9 bits (48), Expect(5) = 6e-029
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 571 SIVKRMERQWMPFGIVLAASWLRK 500
S + ++RQWM G+ LAA L K
Sbjct: 128 SSINLIDRQWMLLGMDLAAIKLAK 57
>gb|DR744317.1|DR744317 RTCU1_21_E03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_21_E03_A029 5', mRNA sequence
Length = 749
Score = 115 bits (246), Expect(2) = 7e-048
Identities = 42/64 (65%), Positives = 56/64 (87%)
Frame = +3 / +3
Query: 942 SSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGA 1121
+S L R+PKY+S+LNHLR YLP+++P L+K++FLDDDIV+QRDL+ LW++DL G VNGA
Sbjct: 420 ASKLLSRSPKYMSILNHLRIYLPELFPNLHKVVFLDDDIVIQRDLSPLWDIDLQGKVNGA 599
Query: 1122 VETC 1133
VETC
Sbjct: 600 VETC 611
Score = 96.4 bits (204), Expect(2) = 7e-048
Identities = 41/96 (42%), Positives = 59/96 (61%)
Frame = +3 / +3
Query: 621 LENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPG 800
L + +H+ L +DNVLAASVVV+S N PE VFH++TDK + AM+ WF L+P
Sbjct: 81 LTDNSYHHFVLPTDNVLAASVVVSSAAKNFATPETAVFHVITDKKTYAAMHAWFALHPLA 260
Query: 801 DATIHVENVDDFKWLNSSYCPVLKQLESAAMKEYYF 908
A I V++V F+WL PVL+ +E+ + Y+
Sbjct: 261 PAIIEVKSVHHFEWLTKENVPVLEVMETQSEIRRYY 368
>gb|CX713339.1|CX713339 RTPQ1_8_B07.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_8_B07_A032 5', mRNA sequence
Length = 657
Score = 150 bits (323), Expect(2) = 3e-045
Identities = 58/96 (60%), Positives = 78/96 (81%)
Frame = +3 / +2
Query: 624 ENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGD 803
E+P+LYHYA+FSDNV+AASVVVNS + NAKEP KHVFH+VTDK+N AM +WF +
Sbjct: 245 EDPNLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLAAMQVWFKMRSLNG 424
Query: 804 ATIHVENVDDFKWLNSSYCPVLKQLESAAMKEYYFK 911
+ + V+ V+D+K+LNSSY PVL+QLESA ++ +YF+
Sbjct: 425 SHVEVKAVEDYKFLNSSYVPVLRQLESANLQRFYFE 532
Score = 75.8 bits (159), Expect(3) = 4e-022
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = -2 / -1
Query: 781 NHMFMAPKFSLSVTR*NTCFSGSLAFMMVELTTTDAAKTLSEKRA*W*RSGFS 623
N +A +F LSVT *NTCF GSLAF+ ELTTT+AA TLSE A*W*R G S
Sbjct: 402 NQTCIAARFILSVTT*NTCFQGSLAFLTAELTTTEAAMTLSENMA*W*RLGSS 244
Score = 52.4 bits (108), Expect(2) = 3e-045
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3 / +2
Query: 435 QRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRL 563
Q+L+ + + ++Q+ KKQ F S +AAK+IP IHCLSMRL
Sbjct: 53 QKLKDTIFAVNDQLTRAKKQGAFASLIAAKSIPKSIHCLSMRL 181
Score = 34.1 bits (68), Expect(3) = 4e-022
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 886 ADSSCFRTGQ*EEFNHLKSSTFST 815
ADSSC +TG *EEF +L SST T
Sbjct: 507 ADSSCRKTGT*EEFKNL*SSTALT 436
Score = 33.1 bits (66), Expect(3) = 4e-022
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2 / -1
Query: 571 SIVKRMERQWMPFGIVLAASWLRKVLCFFKLRTCSSAD*SIALKRWVIS 425
S + ++RQWM G+ LAA L K CF S ++L W+ +
Sbjct: 189 SSINLIDRQWMLLGMDLAAIKLAKAPCFLARVNWSFTANIVSLSFWIFN 43
>gb|DR169155.1|DR169155 RTPHOS1_30_A06.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_30_A06_A029 5', mRNA sequence
Length = 568
Score = 142 bits (305), Expect(2) = 8e-043
Identities = 56/88 (63%), Positives = 72/88 (81%)
Frame = +3 / +2
Query: 624 ENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGD 803
E+P+LYHYA+FSDNV+AASVVVNS + NAKEP KHVFH+VTDK+N AM +WF +
Sbjct: 299 EDPNLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLAAMQVWFKMRSLNG 478
Query: 804 ATIHVENVDDFKWLNSSYCPVLKQLESA 887
+ + V+ V+D+K+LNSSY PVL+QLESA
Sbjct: 479 SHVEVKAVEDYKFLNSSYVPVLRQLESA 562
Score = 75.8 bits (159), Expect(3) = 4e-022
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = -2 / -2
Query: 781 NHMFMAPKFSLSVTR*NTCFSGSLAFMMVELTTTDAAKTLSEKRA*W*RSGFS 623
N +A +F LSVT *NTCF GSLAF+ ELTTT+AA TLSE A*W*R G S
Sbjct: 456 NQTCIAARFILSVTT*NTCFQGSLAFLTAELTTTEAAMTLSENMA*W*RLGSS 298
Score = 52.4 bits (108), Expect(2) = 8e-043
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3 / +2
Query: 435 QRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRL 563
Q+L+ + + ++Q+ KKQ F S +AAK+IP IHCLSMRL
Sbjct: 107 QKLKDTIFAVNDQLTRAKKQGAFASLIAAKSIPKSIHCLSMRL 235
Score = 34.1 bits (68), Expect(3) = 4e-022
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 886 ADSSCFRTGQ*EEFNHLKSSTFST 815
ADSSC +TG *EEF +L SST T
Sbjct: 561 ADSSCRKTGT*EEFKNL*SSTALT 490
Score = 33.1 bits (66), Expect(3) = 4e-022
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2 / -2
Query: 571 SIVKRMERQWMPFGIVLAASWLRKVLCFFKLRTCSSAD*SIALKRWVIS 425
S + ++RQWM G+ LAA L K CF S ++L W+ +
Sbjct: 243 SSINLIDRQWMLLGMDLAAIKLAKAPCFLARVNWSFTANIVSLSFWIFN 97
>gb|DR692110.1|DR692110 EST1082197 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADI14 3' end, mRNA sequence
Length = 741
Score = 145 bits (311), Expect(3) = 7e-041
Identities = 61/117 (52%), Positives = 75/117 (64%)
Frame = +3 / +2
Query: 609 NSENLENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLL 788
+S L + LYH+ +FSDNVLA SVVVNST+ NA PE+ VFH+VTD++N GA WF +
Sbjct: 191 HSPKLTDNKLYHFCVFSDNVLATSVVVNSTVQNADYPEQLVFHIVTDEINHGATQAWFAM 370
Query: 789 NPPGDATIHVENVDDFKWLNSSYCPVLKQLESAAMKEYYFKADRPKTLSAGSSNLKY 959
N A I V+NVDDF WLN+SY PVLKQL + YYFK + N KY
Sbjct: 371 NDYRGAAIEVQNVDDFNWLNASYVPVLKQLRDEETQSYYFKGSSDMKSAIKFRNPKY 541
Score = 133 bits (286), Expect(2) = 6e-034
Identities = 50/70 (71%), Positives = 63/70 (90%)
Frame = +3 / +2
Query: 945 SNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAV 1124
S +K+RNPKYLSMLNHLRFY+P+VYP L K++FLD D+VVQ+DLT L+ +DL+GNVNGAV
Sbjct: 512 SAIKFRNPKYLSMLNHLRFYIPEVYPALEKVVFLDHDVVVQKDLTPLFSIDLHGNVNGAV 691
Query: 1125 ETCGESFHRF 1154
ETC E+FHR+
Sbjct: 692 ETCLETFHRY 721
Score = 75.3 bits (158), Expect(2) = 4e-026
Identities = 45/102 (44%), Positives = 52/102 (50%)
Frame = -2 / -1
Query: 961 RYFRLEEPAESVFGRSALK*YSFMAADSSCFRTGQ*EEFNHLKSSTFSTWIVASPGGFSK 782
RYF L LK* +++ SCF TG *+ F+ LKSSTF T + A F
Sbjct: 543 RYFGLRNLIALFISEEPLK**LCVSSSRSCFNTGT*DAFSQLKSSTFCTSMAAPL*SFIA 364
Query: 781 NHMFMAPKFSLSVTR*NTCFSGSLAFMMVELTTTDAAKTLSE 656
N +AP SVT T SG AF VE TTTD A TLSE
Sbjct: 363 NQACVAP*LISSVTIWKTSCSG*SAF*TVEFTTTDVASTLSE 238
Score = 63.8 bits (133), Expect(2) = 4e-026
Identities = 32/64 (50%), Positives = 40/64 (62%)
Frame = -2 / -1
Query: 1150 R*KLSPHVSTAPFTFPLRSTSQSPVRSLWTTISSSRKRILFSLG*TCGR*NLR*LSMDKY 971
R* +S VSTAP TFP +S +S V+S TT S SRK G T G *NL+ +M++Y
Sbjct: 717 R*NVSRQVSTAPLTFPCKSIEKSGVKSF*TTTS*SRKTTFSRAGYTSGI*NLKWFNMERY 538
Query: 970 FGFR 959
FG R
Sbjct: 537 FGLR 526
Score = 40.9 bits (83), Expect(3) = 7e-041
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +3 / +2
Query: 438 RLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDY 575
+L+A +Q+ +++ + QST QLAA+ +P G++C L+ ++
Sbjct: 11 KLKAQIQALEDRTNAATIQSTTFGQLAAEAVPKGLYCFGTMLSKEW 148
Score = 31.3 bits (62), Expect(2) = 6e-034
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2 / +1
Query: 740 CY*QTELWGHEHVVFAESTWGCNNPCGKC**LQMVKLFLLPCSEAA 877
C+ + WGH +V E G ++ +C *L + K L C EAA
Sbjct: 322 CHR*NQSWGHASLVCYE*L*GSSHRSAECG*L*LAKCILCSCVEAA 459
Score = 25.4 bits (49), Expect(3) = 7e-041
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2 / +1
Query: 1103 WKCKWSRGNMWREFSPI 1153
WKC+W N+ + SP+
Sbjct: 670 WKCQWGGRNLP*DISPV 720
>gb|DT637161.1|DT637161 EST1152092 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH039 3' end, mRNA sequence
Length = 879
Score = 145 bits (311), Expect(3) = 9e-041
Identities = 61/117 (52%), Positives = 75/117 (64%)
Frame = +3 / +1
Query: 609 NSENLENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLL 788
+S L + LYH+ +FSDNVLA SVVVNST+ NA PE+ VFH+VTD++N GA WF +
Sbjct: 199 HSPKLTDNKLYHFCVFSDNVLATSVVVNSTVQNADYPEQLVFHIVTDEINHGATQAWFAM 378
Query: 789 NPPGDATIHVENVDDFKWLNSSYCPVLKQLESAAMKEYYFKADRPKTLSAGSSNLKY 959
N A I V+NVDDF WLN+SY PVLKQL + YYFK + N KY
Sbjct: 379 NDYRGAAIEVQNVDDFNWLNASYVPVLKQLRDEETQSYYFKGSSDMKSAIKFRNPKY 549
Score = 133 bits (286), Expect(2) = 6e-034
Identities = 50/70 (71%), Positives = 63/70 (90%)
Frame = +3 / +1
Query: 945 SNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAV 1124
S +K+RNPKYLSMLNHLRFY+P+VYP L K++FLD D+VVQ+DLT L+ +DL+GNVNGAV
Sbjct: 520 SAIKFRNPKYLSMLNHLRFYIPEVYPALEKVVFLDHDVVVQKDLTPLFSIDLHGNVNGAV 699
Query: 1125 ETCGESFHRF 1154
ETC E+FHR+
Sbjct: 700 ETCLETFHRY 729
Score = 75.3 bits (158), Expect(2) = 4e-026
Identities = 45/102 (44%), Positives = 52/102 (50%)
Frame = -2 / -2
Query: 961 RYFRLEEPAESVFGRSALK*YSFMAADSSCFRTGQ*EEFNHLKSSTFSTWIVASPGGFSK 782
RYF L LK* +++ SCF TG *+ F+ LKSSTF T + A F
Sbjct: 551 RYFGLRNLIALFISEEPLK**LCVSSSRSCFNTGT*DAFSQLKSSTFCTSMAAPL*SFIA 372
Query: 781 NHMFMAPKFSLSVTR*NTCFSGSLAFMMVELTTTDAAKTLSE 656
N +AP SVT T SG AF VE TTTD A TLSE
Sbjct: 371 NQACVAP*LISSVTIWKTSCSG*SAF*TVEFTTTDVASTLSE 246
Score = 63.8 bits (133), Expect(2) = 4e-026
Identities = 32/64 (50%), Positives = 40/64 (62%)
Frame = -2 / -2
Query: 1150 R*KLSPHVSTAPFTFPLRSTSQSPVRSLWTTISSSRKRILFSLG*TCGR*NLR*LSMDKY 971
R* +S VSTAP TFP +S +S V+S TT S SRK G T G *NL+ +M++Y
Sbjct: 725 R*NVSRQVSTAPLTFPCKSIEKSGVKSF*TTTS*SRKTTFSRAGYTSGI*NLKWFNMERY 546
Query: 970 FGFR 959
FG R
Sbjct: 545 FGLR 534
Score = 40.9 bits (83), Expect(3) = 9e-041
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +3 / +1
Query: 438 RLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDY 575
+L+A +Q+ +++ + QST QLAA+ +P G++C L+ ++
Sbjct: 19 KLKAQIQALEDRTNAATIQSTTFGQLAAEAVPKGLYCFGTMLSKEW 156
Score = 31.3 bits (62), Expect(2) = 6e-034
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2 / +3
Query: 740 CY*QTELWGHEHVVFAESTWGCNNPCGKC**LQMVKLFLLPCSEAA 877
C+ + WGH +V E G ++ +C *L + K L C EAA
Sbjct: 330 CHR*NQSWGHASLVCYE*L*GSSHRSAECG*L*LAKCILCSCVEAA 467
Score = 25.4 bits (49), Expect(3) = 9e-041
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2 / +3
Query: 1103 WKCKWSRGNMWREFSPI 1153
WKC+W N+ + SP+
Sbjct: 678 WKCQWGGRNLP*DISPV 728
>gb|BQ655460.1|BQ655460 NXRV094_H04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV094_H04 5' similar to Arabidopsis thaliana
sequence At3g25140 glycosyl transferase, putative see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 492
Score = 127 bits (271), Expect(2) = 4e-038
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +3 / +1
Query: 624 ENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGD 803
E+P+LYHYA+FSDNV+AASVVVNS + NAKEP KHVFH+VTDK+N AM +WF +
Sbjct: 223 EDPNLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLAAMQVWFKMRSLNG 402
Query: 804 ATIHVENVDDFKWLNSSYCPVLKQ 875
+ + V+ +D+K+ NSSY P ++Q
Sbjct: 403 SHVEVKAXEDYKFXNSSYVPXMRQ 474
Score = 52.4 bits (108), Expect(2) = 4e-038
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3 / +1
Query: 435 QRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRL 563
Q+L+ + + ++Q+ KKQ F S +AAK+IP IHCLSMRL
Sbjct: 31 QKLKDTIFAVNDQLTRAKKQGAFASLIAAKSIPKSIHCLSMRL 159
>gb|DR053011.1|DR053011 RTCA1_8_A01.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_8_A01_A029 5', mRNA sequence
Length = 802
Score = 150 bits (323), Expect(2) = 9e-038
Identities = 56/91 (61%), Positives = 76/91 (83%)
Frame = +3 / +3
Query: 885 AAMKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVV 1064
+A + ++ ++ + + + N+K+RNPKYLSMLNHLRFYLP++YPKL++ILFLDDD+VV
Sbjct: 321 SANLQRFYFENKLENATKDAPNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVV 500
Query: 1065 QRDLTGLWEVDLNGNVNGAVETCGESFHRFD 1157
Q+DLTGLWE+D+ G VNGAVETC SFHR+D
Sbjct: 501 QKDLTGLWEIDMEGKVNGAVETCFGSFHRYD 593
Score = 150 bits (323), Expect(2) = 6e-037
Identities = 58/96 (60%), Positives = 78/96 (81%)
Frame = +3 / +3
Query: 624 ENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGD 803
E+P+LYHYA+FSDNV+AASVVVNS + NAKEP KHVFH+VTDK+N AM +WF +
Sbjct: 63 EDPNLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLAAMQVWFKMRSLNG 242
Query: 804 ATIHVENVDDFKWLNSSYCPVLKQLESAAMKEYYFK 911
+ + V+ V+D+K+LNSSY PVL+QLESA ++ +YF+
Sbjct: 243 SHVEVKAVEDYKFLNSSYVPVLRQLESANLQRFYFE 350
Score = 75.8 bits (159), Expect(3) = 2e-032
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = -2 / -1
Query: 781 NHMFMAPKFSLSVTR*NTCFSGSLAFMMVELTTTDAAKTLSEKRA*W*RSGFS 623
N +A +F LSVT *NTCF GSLAF+ ELTTT+AA TLSE A*W*R G S
Sbjct: 220 NQTCIAARFILSVTT*NTCFQGSLAFLTAELTTTEAAMTLSENMA*W*RLGSS 62
Score = 68.4 bits (143), Expect(3) = 2e-032
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = -2 / -1
Query: 1132 HVSTAPFTFPLRSTSQSPVRSLWTTISSSRKRILFSLG*TCGR*NLR*LSMDKYFGFRYF 953
HVSTAP TFP S S +PVRS TT SSSR +I + G G+* R* +M++Y GF F
Sbjct: 568 HVSTAPLTFPSISISHNPVRSF*TTTSSSRNKIRCNFGYISGK*KRR*FNMERYLGFLNF 389
Query: 952 RL 947
L
Sbjct: 388 IL 383
Score = 34.1 bits (68), Expect(3) = 2e-032
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 886 ADSSCFRTGQ*EEFNHLKSSTFST 815
ADSSC +TG *EEF +L SST T
Sbjct: 325 ADSSCRKTGT*EEFKNL*SSTALT 254
Score = 30.4 bits (60), Expect(2) = 9e-038
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2 / +2
Query: 638 LPLCSFLGQCFGSISCGQLNHHEC*GA*KTCIS 736
LPLC QC C Q EC A + CIS
Sbjct: 77 LPLCHIFRQCHCCFGCRQFCS*ECQRALEACIS 175
Score = 24.4 bits (47), Expect(2) = 6e-037
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2 / +2
Query: 953 EVSKPKIFVHAQSSKILPPTSLSQAE*NSFPG**YSCPEGPNWTLG 1090
EV + ++ H +SS +L +S+ + ** C EGP+ +G
Sbjct: 389 EV*ESQVSFHVESSALLFA*DVSKVTPDLVSR**CCCSEGPDGIMG 526
>gb|BQ699412.1|BQ699412 NXRV127_E03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV127_E03 5' similar to Arabidopsis thaliana
sequence At3g25140 glycosyl transferase, putative see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 544
Score = 104 bits (221), Expect(4) = 1e-036
Identities = 39/53 (73%), Positives = 47/53 (88%)
Frame = +3 / +1
Query: 624 ENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWF 782
E+P+LYHYA+FSDNV+AASVVVNS + NAKEP KHVFH+VTDK+N AM +WF
Sbjct: 214 EDPNLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLAAMQVWF 372
Score = 52.4 bits (108), Expect(4) = 1e-036
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3 / +1
Query: 435 QRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRL 563
Q+L+ + + ++Q+ KKQ F S +AAK+IP IHCLSMRL
Sbjct: 22 QKLKDTIFAVNDQLTRAKKQGAFASLIAAKSIPKSIHCLSMRL 150
Score = 28.1 bits (55), Expect(4) = 1e-036
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 861 PVLKQLESAAMKEYYF 908
PVL+QLESA ++ +YF
Sbjct: 453 PVLRQLESANLQXFYF 500
Score = 25.4 bits (49), Expect(4) = 1e-036
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 816 VENVDDFKWLNSSY 857
V+ V+D+K+LNSSY
Sbjct: 407 VKAVEDYKFLNSSY 448
>gb|DR109571.1|DR109571 RTS1_3_E05.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_3_E05_A029 3', mRNA sequence
Length = 820
Score = 149 bits (321), Expect = 3e-035
Identities = 55/70 (78%), Positives = 66/70 (94%)
Frame = +3 / +3
Query: 948 NLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVE 1127
N+K+RNPKYLSMLNHLRFYLP++YPKL++ILFLDDD+VVQ+DLTGLWE+D+ G VNGAVE
Sbjct: 12 NMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWEIDMEGKVNGAVE 191
Query: 1128 TCGESFHRFD 1157
TC SFHR+D
Sbjct: 192 TCFGSFHRYD 221
>gb|DR161477.1|DR161477 RTFE1_12_B06.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_12_B06_A029 3', mRNA sequence
Length = 482
Score = 147 bits (316), Expect = 1e-034
Identities = 54/85 (63%), Positives = 72/85 (84%)
Frame = +3 / -2
Query: 903 YFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTG 1082
++ ++ + + + N+K+ NPKYLSMLNHLRFYLP++YPKL++ILFLDDD+VVQ+DLTG
Sbjct: 457 FYFENKLENATKDAPNMKFMNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTG 278
Query: 1083 LWEVDLNGNVNGAVETCGESFHRFD 1157
LWE+D+ G VNGAVETC SFHR+D
Sbjct: 277 LWEIDMEGKVNGAVETCFGSFHRYD 203
>gb|DR689244.1|DR689244 EST1079330 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACF91 3' end, mRNA sequence
Length = 854
Score = 146 bits (313), Expect = 3e-034
Identities = 54/68 (79%), Positives = 64/68 (94%)
Frame = +3 / +2
Query: 954 KYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVETC 1133
K+RNPKYLSMLNHLRFYLP++YPKL++ILFLDDD+VVQ+DLTGLWE+D+ G VNGAVETC
Sbjct: 2 KFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWEIDMEGKVNGAVETC 181
Query: 1134 GESFHRFD 1157
SFHR+D
Sbjct: 182 FGSFHRYD 205
>gb|DT635347.1|DT635347 EST1150278 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGF84 3' end, mRNA sequence
Length = 768
Score = 146 bits (313), Expect = 3e-034
Identities = 54/68 (79%), Positives = 64/68 (94%)
Frame = +3 / +1
Query: 954 KYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVETC 1133
K+RNPKYLSMLNHLRFYLP++YPKL++ILFLDDD+VVQ+DLTGLWE+D+ G VNGAVETC
Sbjct: 10 KFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWEIDMEGKVNGAVETC 189
Query: 1134 GESFHRFD 1157
SFHR+D
Sbjct: 190 FGSFHRYD 213
>gb|BQ107024.1|BQ107024 NXLV085_F11_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV085_F11 5' similar to Arabidopsis thaliana
sequence At2g20807 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 732
Score = 138 bits (295), Expect(2) = 6e-034
Identities = 53/77 (68%), Positives = 66/77 (85%)
Frame = +3 / +1
Query: 924 KTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLN 1103
K S S +K+RNPKYLSMLNHLRFY+P+VYP L K++FLDDD+VVQ+DLT L+ +DL+
Sbjct: 160 KGFSDMKSAIKFRNPKYLSMLNHLRFYIPEVYPALEKVVFLDDDVVVQKDLTPLFSIDLH 339
Query: 1104 GNVNGAVETCGESFHRF 1154
GNVNGAVETC E+FHR+
Sbjct: 340 GNVNGAVETCLETFHRY 390
Score = 27.2 bits (53), Expect(2) = 6e-034
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2 / +3
Query: 764 GHEHVVFAESTWGCNNPCGKC**LQMVKLFLLPCSEAA 877
GH +V E G N+ +C *L + K L C EAA
Sbjct: 15 GHASLVCYE*L*GSNHRSAECG*L*LAKCILCSCVEAA 128
>gb|BQ197959.1|BQ197959 NXLV123_C04_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV123_C04 5' similar to Arabidopsis thaliana
sequence At3g25140 glycosyl transferase, putative see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 442
Score = 139 bits (298), Expect = 4e-032
Identities = 52/91 (57%), Positives = 71/91 (78%)
Frame = +3 / +1
Query: 885 AAMKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVV 1064
+A + ++ ++ + + + N+K+RNPKYLSMLNHLRFYLP++YPK ++ILFLDDD+VV
Sbjct: 157 SANLQRFYFENKLENATKDAPNMKFRNPKYLSMLNHLRFYLPEMYPKFHRILFLDDDVVV 336
Query: 1065 QRDLTGLWEVDLNGNVNGAVETCGESFHRFD 1157
Q+DLTGLWE+ + G VNGA ETC SFH D
Sbjct: 337 QKDLTGLWEIXMEGKVNGAAETCFGSFHXXD 429
>gb|CO364079.1|CO364079 RTK1_13_C05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_C05_A029 5', mRNA sequence
Length = 912
Score = 137 bits (293), Expect = 2e-031
Identities = 51/70 (72%), Positives = 64/70 (91%)
Frame = +3 / -1
Query: 945 SNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAV 1124
S +K+RNPKYLSMLNHLRFY+P+VYP L K++FLDDD+VVQ+DLT L+ +DL+GNVNGAV
Sbjct: 810 SAIKFRNPKYLSMLNHLRFYIPEVYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAV 631
Query: 1125 ETCGESFHRF 1154
ETC E+FHR+
Sbjct: 630 ETCLETFHRY 601
>gb|DR112556.1|DR112556 RTS1_29_B07.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_29_B07_A029 3', mRNA sequence
Length = 688
Score = 135 bits (290), Expect = 5e-031
Identities = 50/71 (70%), Positives = 64/71 (90%)
Frame = +3 / +2
Query: 942 SSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGA 1121
S LK+ NPKYLSMLNHLRFY+P++YP L+K++FLDDD+VVQ+DLT L+ +DL+GNVNGA
Sbjct: 14 SKALKFHNPKYLSMLNHLRFYIPEIYPALDKVVFLDDDVVVQKDLTPLFSIDLHGNVNGA 193
Query: 1122 VETCGESFHRF 1154
VETC E+FHR+
Sbjct: 194 VETCLETFHRY 226
>gb|BF221350.1|BF221350 NXCI_157_F07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_157_F07 5' similar to Arabidopsis
thaliana sequence At5g15470 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 554
Score = 108 bits (230), Expect(2) = 5e-028
Identities = 39/61 (63%), Positives = 52/61 (85%)
Frame = +3 / +3
Query: 951 LKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVET 1130
L+ ++PKY S+LNH+R YLP+++P L K++FLDDDIVVQ DL+ LW++DL G VNGAVET
Sbjct: 198 LQAQSPKYFSILNHVRIYLPELFPNLEKVVFLDDDIVVQHDLSPLWDIDLQGKVNGAVET 377
Query: 1131 C 1133
C
Sbjct: 378 C 380
Score = 37.3 bits (75), Expect(2) = 5e-028
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3 / +3
Query: 768 MNMWFLLNPPGDATIHVENVDDFKWLNSSYCPVLKQLE 881
M+ WF L+P A I V+ + F WL PVL++++
Sbjct: 6 MHAWFALHPIPSAIIEVKGLHQFTWLLKDKVPVLEEMK 119
>gb|BQ697933.1|BQ697933 NXPV_062_F07_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_062_F07 5' similar to Arabidopsis
thaliana sequence At5g15470 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 517
Score = 108 bits (230), Expect(2) = 3e-025
Identities = 39/61 (63%), Positives = 52/61 (85%)
Frame = +3 / +1
Query: 951 LKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVET 1130
L+ ++PKY S+LNH+R YLP+++P L K++FLDDDIVVQ DL+ LW++DL G VNGAVET
Sbjct: 178 LQAQSPKYFSILNHVRIYLPELFPNLEKVVFLDDDIVVQHDLSPLWDIDLQGKVNGAVET 357
Query: 1131 C 1133
C
Sbjct: 358 C 360
Score = 27.6 bits (54), Expect(2) = 3e-025
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3 / +1
Query: 786 LNPPGDATIHVENVDDFKWLNSSYCPVLKQLE 881
L+P A I V+ + F WL PVL++++
Sbjct: 4 LHPIPSAIIEVKGLHQFTWLLKDKVPVLEEMK 99
>gb|BF010558.1|BF010558 NXCI_086_A04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_086_A04 5' similar to Arabidopsis
thaliana sequence At5g54690 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 387
Score = 98.2 bits (208), Expect(2) = 5e-025
Identities = 36/61 (59%), Positives = 48/61 (78%)
Frame = +3 / +3
Query: 951 LKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVET 1130
L+ ++PKY S+LNH+R YLP+++P L +FLDDDIVV DL+ LW++DL G VNGA ET
Sbjct: 198 LQAQSPKYFSILNHVRIYLPELFPNLEXXVFLDDDIVVXXDLSPLWDIDLQGKVNGAXET 377
Query: 1131 C 1133
C
Sbjct: 378 C 380
Score = 37.3 bits (75), Expect(2) = 5e-025
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3 / +3
Query: 768 MNMWFLLNPPGDATIHVENVDDFKWLNSSYCPVLKQLE 881
M+ WF L+P A I V+ + F WL PVL++++
Sbjct: 6 MHAWFALHPIPSAIIEVKGLHQFTWLLKDKVPVLEEMK 119
>gb|BX254765.1|BX254765 BX254765 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP104A12, mRNA sequence
Length = 629
Score = 82.2 bits (173), Expect(2) = 1e-024
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = +3 / +2
Query: 642 HYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVE 821
H+ L +DNVLAASVVV S + N+ +P+K VFH++TDK + M+ WF L+P A I V+
Sbjct: 428 HFVLATDNVLAASVVVLSAVRNSAKPDKVVFHVITDKKTYAPMHAWFALHPIPSAIIEVK 607
Query: 822 NVDDFKW 842
+ F W
Sbjct: 608 GLHQFTW 628
Score = 51.9 bits (107), Expect(2) = 1e-024
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +3 / +2
Query: 414 YDCKEITQRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLSPE 593
YD K +++AM+ +++ RS + +A+ +IP G+HCLS++L +Y +
Sbjct: 191 YDAKTFAFKIKAMMGQLEQKARSSRMHEYLYRHIASSSIPKGMHCLSLKLADEYTSNAHA 370
Query: 594 KRKFPNSE 617
+++ P E
Sbjct: 371 RKQLPAPE 394
>gb|BG673827.1|BG673827 NXPV_075_F03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_075_F03 5' similar to Arabidopsis
thaliana sequence At3g01040 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 380
Score = 102 bits (218), Expect = 4e-021
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +3 / +3
Query: 951 LKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVET 1130
L+ ++PKY S+LNH+R YLP+++P L KI+FLDDDIVVQ DL+ LW++DL NGAVET
Sbjct: 129 LQAQSPKYFSILNHVRIYLPELFPNLEKIVFLDDDIVVQHDLSPLWDIDLQXXXNGAVET 308
Query: 1131 C 1133
C
Sbjct: 309 C 311
>gb|BQ698491.1|BQ698491 NXPV_070_E11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_070_E11 5' similar to Arabidopsis
thaliana sequence At3g01040 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 439
Score = 102 bits (217), Expect = 6e-021
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +3 / +1
Query: 951 LKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVET 1130
L+ ++PKY S+LNH+R YLP+++P L KI+FLDDDIVVQ DL+ LW++DL NGAVET
Sbjct: 130 LQAQSPKYFSILNHVRIYLPELFPNLEKIVFLDDDIVVQHDLSPLWDIDLXXXXNGAVET 309
Query: 1131 C 1133
C
Sbjct: 310 C 312
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 625,218,731
Number of Sequences: 355925
Number of extensions: 8979300
Number of successful extensions: 40515
Number of sequences better than 1.0e-020: 37
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 18693040280
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)