TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3128444.2.1
(857 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR690593.1|DR690593 EST1080679 Normalized pine embryo li... 171 3e-066
gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch... 97 3e-064
gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response R... 138 2e-062
gb|DR048711.1|DR048711 RTBOR1_10_E10.g1_A029 Roots plus add... 239 2e-062
gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response R... 102 2e-058
gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response R... 102 2e-058
gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calc... 102 5e-058
gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iro... 102 5e-058
gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch... 102 5e-058
gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calc... 102 5e-058
gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch... 102 8e-058
gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch... 102 8e-058
gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA... 160 1e-057
gb|CO369254.1|CO369254 RTK1_46_A07.b1_A029 Roots minus pota... 145 3e-053
gb|CO369338.1|CO369338 RTK1_46_A07.g1_A029 Roots minus pota... 145 3e-053
gb|DT636173.1|DT636173 EST1151104 Normalized pine embryo li... 128 3e-053
gb|CX712929.1|CX712929 RTPQ1_5_F12.g1_A032 Roots treated wi... 162 1e-051
gb|DR020312.1|DR020312 STRS1_36_C01.b1_A034 Shoot tip pitch... 150 5e-051
gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus cal... 102 1e-047
gb|CO164776.1|CO164776 FLD1_50_F04.b1_A029 Root flooded Pin... 96 3e-044
gb|DR387566.1|DR387566 RTHG1_22_E08.g2_A029 Roots plus adde... 100 6e-044
gb|BG039942.1|BG039942 NXSI_101_H03_F NXSI (Nsf Xylem Side ... 100 1e-043
gb|CO199421.1|CO199421 GEO2_1_C06.b1_A032 Root gravitropism... 153 1e-042
gb|CF477622.1|CF477622 RTWW3_9_B03.b1_A022 Well-watered lob... 102 9e-042
gb|BX254352.1|BX254352 BX254352 Pinus pinaster differenciat... 96 1e-041
gb|CO361958.1|CO361958 NDL2_8_E08.b1_A029 Needles control 2... 170 2e-041
gb|CO162557.1|CO162557 FLD1_36_C02.b1_A029 Root flooded Pin... 100 2e-041
gb|BX250956.1|BX250956 BX250956 Pinus pinaster differenciat... 164 9e-041
gb|CX652916.1|CX652916 COLD1_62_F11.b1_A029 Root cold Pinus... 138 1e-040
gb|DR081506.1|DR081506 RTFEPL1_30_D11.b1_A029 Roots plus ad... 102 1e-040
gb|DR048637.1|DR048637 RTBOR1_10_E10.b1_A029 Roots plus add... 165 4e-040
gb|DR014803.1|DR014803 HEAT1_51_E12.g1_A029 Root at 37 C fo... 160 1e-039
gb|CX646974.1|CX646974 COLD1_12_D12.g1_A029 Root cold Pinus... 95 1e-039
gb|DR013586.1|DR013586 HEAT1_20_F02.b1_A029 Root at 37 C fo... 102 3e-039
gb|CO162371.1|CO162371 FLD1_34_H05.g1_A029 Root flooded Pin... 161 5e-039
gb|DR080921.1|DR080921 RTFEPL1_26_D08.b1_A029 Roots plus ad... 161 5e-039
gb|DR024579.1|DR024579 STRS1_66_A03.b1_A034 Shoot tip pitch... 102 1e-038
gb|CF390726.1|CF390726 RTDR2_17_D05.g1_A021 Loblolly pine r... 152 5e-038
gb|CF668848.1|CF668848 RTCNT1_39_C01.b1_A029 Root control P... 158 6e-038
gb|BX679902.1|BX679902 BX679902 RS Pinus pinaster cDNA clon... 158 6e-038
gb|CX652294.1|CX652294 COLD1_58_E05.b1_A029 Root cold Pinus... 102 2e-037
gb|DR685831.1|DR685831 EST1075908 Normalized pine embryo li... 79 8e-037
gb|DR744663.1|DR744663 RTCU1_24_B09.b1_A029 Roots plus adde... 153 1e-036
gb|DR111231.1|DR111231 RTS1_16_F03.b1_A029 Roots minus sulf... 102 5e-036
gb|DR743165.1|DR743165 RTCU1_14_B08.b1_A029 Roots plus adde... 117 6e-036
gb|CO364332.1|CO364332 RTK1_15_D02.b1_A029 Roots minus pota... 102 7e-036
gb|CO364421.1|CO364421 RTK1_15_D02.g1_A029 Roots minus pota... 102 7e-036
gb|CX650807.1|CX650807 COLD1_48_F06.b1_A029 Root cold Pinus... 150 9e-036
gb|DR013536.1|DR013536 HEAT1_19_H11.g1_A029 Root at 37 C fo... 150 1e-035
gb|DR385366.1|DR385366 RTHG1_8_F01.b1_A029 Roots plus added... 149 2e-035
gb|CF390062.1|CF390062 RTDR2_12_E07.b1_A021 Loblolly pine r... 121 7e-035
gb|AW042637.1|AW042637 ST24C01 Pine TriplEx shoot tip libra... 140 9e-035
gb|DR078735.1|DR078735 RTFEPL1_6_C01.g1_A029 Roots plus add... 147 1e-034
gb|CO162287.1|CO162287 FLD1_34_H05.b1_A029 Root flooded Pin... 83 2e-034
gb|DR078654.1|DR078654 RTFEPL1_6_C01.b1_A029 Roots plus add... 146 2e-034
gb|CX646890.1|CX646890 COLD1_12_D12.b1_A029 Root cold Pinus... 95 2e-032
gb|CX649586.1|CX649586 COLD1_36_E07.b1_A029 Root cold Pinus... 83 2e-032
gb|CO158039.1|CO158039 FLD1_4_C03.b1_A029 Root flooded Pinu... 126 2e-030
gb|DR081789.1|DR081789 RTFEPL1_32_F12.b1_A029 Roots plus ad... 132 3e-030
gb|DR094032.1|DR094032 STRR1_12_B03.b1_A033 Stem Response R... 83 1e-029
gb|AW010487.1|AW010487 ST07D06 Pine TriplEx shoot tip libra... 67 5e-029
gb|CO169436.1|CO169436 NDL1_7_C03.b1_A029 Needles control P... 81 5e-029
gb|CF390846.1|CF390846 RTDR3_2_H05.b1_A022 Loblolly pine ro... 126 2e-028
gb|CO158951.1|CO158951 FLD1_10_G08.b1_A029 Root flooded Pin... 94 5e-028
gb|CF392633.1|CF392633 RTDR3_5_G10.b1_A022 Loblolly pine ro... 125 5e-028
gb|BX681997.1|BX681997 BX681997 RS Pinus pinaster cDNA clon... 118 7e-028
gb|DR088584.1|DR088584 RTAL1_3_A08.b1_A029 Roots plus added... 123 1e-027
gb|CF671905.1|CF671905 RTCNT1_60_C07.b1_A029 Root control P... 123 2e-027
gb|BG318466.1|BG318466 NXPV_013_H10_F NXPV (Nsf Xylem Plani... 92 4e-027
gb|BQ695893.1|BQ695893 NXPV_033_H04_F NXPV (Nsf Xylem Plani... 92 4e-027
gb|BQ696465.1|BQ696465 NXPV_041_F02_F NXPV (Nsf Xylem Plani... 92 4e-027
gb|BQ697291.1|BQ697291 NXPV_055_C02_F NXPV (Nsf Xylem Plani... 92 4e-027
gb|CO164857.1|CO164857 FLD1_50_F04.g1_A029 Root flooded Pin... 96 7e-027
gb|DR081852.1|DR081852 RTFEPL1_32_F12.g1_A029 Roots plus ad... 92 7e-027
gb|CF390174.1|CF390174 RTDR2_12_E07.g1_A021 Loblolly pine r... 91 9e-026
gb|BE996793.1|BE996793 NXCI_101_B08_F NXCI (Nsf Xylem Compr... 117 1e-025
gb|CF399742.1|CF399742 RTDS3_25_D01.g1_A022 Drought-stresse... 117 1e-025
gb|CD023078.1|CD023078 NXPV_098_G09_F NXPV (Nsf Xylem Plani... 116 3e-025
gb|CF392313.1|CF392313 RTDR3_7_B01.b1_A022 Loblolly pine ro... 114 7e-025
gb|DR110861.1|DR110861 RTS1_13_B02.g1_A029 Roots minus sulf... 102 1e-024
gb|BQ697001.1|BQ697001 NXPV_048_A07_F NXPV (Nsf Xylem Plani... 83 1e-024
gb|CF478150.1|CF478150 RTWW3_19_D01.b1_A022 Well-watered lo... 112 3e-024
gb|AI725219.1|AI725219 1238 PtIFG2 Pinus taeda cDNA clone 9... 85 3e-024
gb|CX652380.1|CX652380 COLD1_58_E05.g1_A029 Root cold Pinus... 81 2e-022
gb|DR118221.1|DR118221 RTMG1_11_H09.g1_A029 Roots minus mag... 105 4e-022
gb|CX651881.1|CX651881 COLD1_55_A04.g1_A029 Root cold Pinus... 105 6e-022
gb|BG319401.1|BG319401 NXPV_027_E09_F NXPV (Nsf Xylem Plani... 71 9e-021
>gb|DR690593.1|DR690593 EST1080679 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACW86 3' end, mRNA sequence
Length = 754
Score = 171 bits (369), Expect(2) = 3e-066
Identities = 65/96 (67%), Positives = 78/96 (81%)
Frame = +1 / +3
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G +IGERAASEWL IVPWG K+L ++ ++YN P IYVTENGMDDED + +DQ LNDT
Sbjct: 465 GNTIGERAASEWLYIVPWGFRKVLKWLTERYNRPPIYVTENGMDDEDSEITLLDQALNDT 644
Query: 460 KRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFE 567
KRV YF GYL ++A+AI +GADVRGYFAWS +DNFE
Sbjct: 645 KRVNYFKGYLKALAEAIWEGADVRGYFAWSLIDNFE 752
Score = 108 bits (230), Expect(2) = 1e-031
Identities = 55/97 (56%), Positives = 62/97 (63%)
Frame = -1 / -1
Query: 569 HSKLSRNDHAKYPRTSAPSLIACATELRYPLK*PTLFVSFRTWSIVADXXXXXSMPFSVT 390
HSKLS D AK PRTSAPS +A A + PLK* TLFVS R WS S+PFSVT
Sbjct: 754 HSKLSIRDQAK*PRTSAPSQMASAKAFK*PLK*FTLFVSLRAWSSNVISESSSSIPFSVT 575
Query: 389 *ITGLLYFFTI*LSNL*RPQGTMTSHSDAALSPMLSP 279
*I GLLY + +P GT+ SHSDAALSPM+ P
Sbjct: 574 *IGGLLYLSVNHFNTFRKPHGTI*SHSDAALSPMVFP 464
Score = 100 bits (214), Expect(2) = 3e-066
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +1 / +3
Query: 10 DQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
D+ AAQRR +FQ GW+LDPIYFGDYP MR++LG LP FS + +R DF+GLNHY
Sbjct: 195 DKEAAQRRREFQFGWFLDPIYFGDYPAIMRKKLGDRLPQFSPDEVAVLRGSSDFLGLNHY 374
Query: 190 TSRLI 204
T+R +
Sbjct: 375 TTRYV 389
Score = 48.7 bits (100), Expect(2) = 1e-031
Identities = 30/58 (51%), Positives = 34/58 (58%)
Frame = -1 / -1
Query: 191 V**FSPIKSILFLMNSLSFSEKVGRSLPSR*RMLSG*SPKYIGSRYHPS*KSILRCAA 18
V** SP KS + S E G PS RM++G*SPKYIGSR P+* S CAA
Sbjct: 376 V**LSPRKSDDPRNTATSSGEN*GSRSPSFFRMIAG*SPKYIGSRNQPN*NSRRLCAA 203
>gb|DR019869.1|DR019869 STRS1_33_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_B04_A034 3', mRNA sequence
Length = 868
Score = 97.3 bits (206), Expect(3) = 3e-064
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = +1 / +2
Query: 271 WSSGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVL 450
+ +G +IG++A+S WL IVP G+ L+NYI ++YN+P + +TENGMDD ++ + L
Sbjct: 266 FKNGRAIGDKASSAWLYIVPHGIRSLMNYIKRRYNNPPVIITENGMDDPNNILIPLKNAL 445
Query: 451 NDTKRVGYFNGYLNSVAQAIKD 516
ND KR+ Y YL++++ AIK+
Sbjct: 446 NDQKRIKYHAHYLSNLSAAIKE 511
Score = 95.5 bits (202), Expect(3) = 3e-064
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +1 / +2
Query: 19 AAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHYTS 195
A QR DFQLGW++DP+ FGDYP SMR+R+G+ LP FS ++ ++ +DF+G+NHYT+
Sbjct: 5 ATQRAQDFQLGWFMDPLVFGDYPASMRERVGNRLPLFSSEESNRVKGSLDFVGINHYTT 181
Score = 92.3 bits (195), Expect(3) = 3e-064
Identities = 35/61 (57%), Positives = 42/61 (68%)
Frame = +1 / +2
Query: 490 NSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRL 669
N A +DG +V GYF WS LDN+EWA GYT RFG+ +VDYK L+R+PKAS WF
Sbjct: 488 NLSAAIKEDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDYKHNLTRYPKASVQWFKCF 667
Query: 670 L 672
L
Sbjct: 668 L 670
>gb|DR095084.1|DR095084 STRR1_18_E04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_18_E04_A033 5', mRNA sequence
Length = 813
Score = 138 bits (295), Expect(3) = 2e-062
Identities = 48/85 (56%), Positives = 66/85 (77%)
Frame = +1 / +1
Query: 418 DDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFG 597
++ ++D+ LNDT R+ Y + +L+ + QAI++GADVRG+FAWS +DNFEW GYT RFG
Sbjct: 457 ENSDPSLDEALNDTWRINYCSEHLHYILQAIREGADVRGFFAWSLMDNFEWGFGYTSRFG 636
Query: 598 IVYVDYKDGLSRHPKASALWFSRLL 672
+Y+DYKDGL R+PKASA W+ R L
Sbjct: 637 FIYIDYKDGLKRYPKASAHWYKRFL 711
Score = 91.8 bits (194), Expect(3) = 2e-062
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = +1 / +1
Query: 10 DQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
DQ AAQR +DF LGW++DP+ GDYP +MR RLG L F+E++ E ++ DF+G+N+Y
Sbjct: 43 DQNAAQRAVDFMLGWFIDPVTSGDYPFTMRDRLGDRLLKFTEQESEQLKGSFDFLGMNYY 222
Query: 190 TSRLIAHHQNP 222
TS+ + +P
Sbjct: 223 TSQYAINCLDP 255
Score = 49.2 bits (101), Expect(3) = 2e-062
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1 / +1
Query: 304 ASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
AS WL + GL LL YI ++YN+P I++TENG++D
Sbjct: 337 ASFWLYVYAPGLRDLLIYIKQRYNNPPIFITENGVND 447
>gb|DR048711.1|DR048711 RTBOR1_10_E10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E10_A029 5', mRNA sequence
Length = 667
Score = 239 bits (516), Expect = 2e-062
Identities = 89/133 (66%), Positives = 108/133 (81%)
Frame = +1 / +3
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G +IGERAASEWL IVPWG K+L ++ ++YN P IYVTENGMDDED + +DQ LNDT
Sbjct: 6 GNTIGERAASEWLYIVPWGFRKVLKWLTERYNRPPIYVTENGMDDEDSEITLLDQALNDT 185
Query: 460 KRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHP 639
KRV YF GYL ++A+AI++GADVRGYFAWS +DNFEW GYTKRFG+V+VDYKD L R+P
Sbjct: 186 KRVNYFKGYLKALAEAIREGADVRGYFAWSLIDNFEWGQGYTKRFGLVFVDYKDDLKRYP 365
Query: 640 KASALWFSRLLKG 678
K+SA WF+ L G
Sbjct: 366 KSSAHWFTSFLHG 404
Score = 131 bits (281), Expect = 6e-030
Identities = 72/131 (54%), Positives = 80/131 (61%)
Frame = -1 / -1
Query: 671 RRRENQRADALGCLESPSL*ST*TMPNLLV*PIAHSKLSRNDHAKYPRTSAPSLIACATE 492
R+ NQ AD G SL*ST T P V*P HSKLS D AK PRTSAPSL+A A
Sbjct: 397 RKLVNQ*ADDFGYRLRSSL*STNTRPKRFV*P*PHSKLSIRDQAK*PRTSAPSLMASAKA 218
Query: 491 LRYPLK*PTLFVSFRTWSIVADXXXXXSMPFSVT*ITGLLYFFTI*LSNL*RPQGTMTSH 312
+ PLK* TLFVS R WS S+PFSVT*I GLLY + +P GT+ SH
Sbjct: 217 FK*PLK*FTLFVSLRAWSSNVISESSSSIPFSVT*IGGLLYLSVNHFNTFRKPHGTI*SH 38
Query: 311 SDAALSPMLSP 279
SDAALSPM+ P
Sbjct: 37 SDAALSPMVFP 5
>gb|DR094103.1|DR094103 STRR1_12_B03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_12_B03_A033 5', mRNA sequence
Length = 864
Score = 102 bits (218), Expect(4) = 2e-058
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / -1
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 330 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 151
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 150 GVVYVDF 130
Score = 83.1 bits (175), Expect(4) = 2e-058
Identities = 30/73 (41%), Positives = 49/73 (67%)
Frame = +1 / -1
Query: 4 TRDQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLN 183
+ DQ AAQR DF +GW+L PI +G YP+SM + +G+ LP F++K + ++ ID++G+N
Sbjct: 738 SEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKKQSQMVKGSIDYLGVN 559
Query: 184 HYTSRLIAHHQNP 222
YT+ + + P
Sbjct: 558 QYTAYYMYDPKQP 520
Score = 67.0 bits (140), Expect(4) = 2e-058
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / -1
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 462 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 325
Score = 30.9 bits (61), Expect(4) = 2e-058
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 123 LKRYPKMSAYWFSKLLQ 73
>gb|DR093835.1|DR093835 STRR1_10_E06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_10_E06_A033 5', mRNA sequence
Length = 788
Score = 102 bits (218), Expect(4) = 2e-058
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / -1
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 371 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 192
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 191 GVVYVDF 171
Score = 83.1 bits (175), Expect(4) = 2e-058
Identities = 30/73 (41%), Positives = 49/73 (67%)
Frame = +1 / -1
Query: 4 TRDQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLN 183
+ DQ AAQR DF +GW+L PI +G YP+SM + +G+ LP F++K + ++ ID++G+N
Sbjct: 779 SEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKKQSQMVKGSIDYLGVN 600
Query: 184 HYTSRLIAHHQNP 222
YT+ + + P
Sbjct: 599 QYTAYYMYDPKQP 561
Score = 67.0 bits (140), Expect(4) = 2e-058
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / -1
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 503 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 366
Score = 30.9 bits (61), Expect(4) = 2e-058
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 164 LKRYPKMSAYWFSKLLQ 114
>gb|DR052459.1|DR052459 RTCA1_4_F07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 5', mRNA sequence
Length = 932
Score = 102 bits (218), Expect(4) = 5e-058
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +1
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 619 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 798
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 799 GVVYVDF 819
Score = 81.3 bits (171), Expect(4) = 5e-058
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +1 / +1
Query: 4 TRDQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLN 183
+ DQ AAQR DF +GW+L PI +G YP+SM + +G+ LP F+++ + ++ ID++G+N
Sbjct: 211 SEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVN 390
Query: 184 HYTSRLIAHHQNP 222
YT+ + + P
Sbjct: 391 QYTAYYMYDPKQP 429
Score = 67.0 bits (140), Expect(4) = 5e-058
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +1
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 487 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 624
Score = 30.9 bits (61), Expect(4) = 5e-058
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 826 LKRYPKMSAYWFSKLLQ 876
>gb|DR164307.1|DR164307 RTFE1_48_D09.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_48_D09_A029 3', mRNA sequence
Length = 868
Score = 102 bits (218), Expect(4) = 5e-058
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +3
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 489 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 668
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 669 GVVYVDF 689
Score = 81.3 bits (171), Expect(4) = 5e-058
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +1 / +3
Query: 4 TRDQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLN 183
+ DQ AAQR DF +GW+L PI +G YP+SM + +G+ LP F+++ + ++ ID++G+N
Sbjct: 81 SEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVN 260
Query: 184 HYTSRLIAHHQNP 222
YT+ + + P
Sbjct: 261 QYTAYYMYDPKQP 299
Score = 67.0 bits (140), Expect(4) = 5e-058
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 357 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 494
Score = 30.9 bits (61), Expect(4) = 5e-058
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 696 LKRYPKMSAYWFSKLLQ 746
>gb|DR019596.1|DR019596 STRS1_31_D05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 3', mRNA sequence
Length = 865
Score = 102 bits (218), Expect(4) = 5e-058
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / -1
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 382 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 203
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 202 GVVYVDF 182
Score = 81.3 bits (171), Expect(4) = 5e-058
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +1 / -1
Query: 4 TRDQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLN 183
+ DQ AAQR DF +GW+L PI +G YP+SM + +G+ LP F+++ + ++ ID++G+N
Sbjct: 790 SEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVN 611
Query: 184 HYTSRLIAHHQNP 222
YT+ + + P
Sbjct: 610 QYTAYYMYDPKQP 572
Score = 67.0 bits (140), Expect(4) = 5e-058
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / -1
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 514 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 377
Score = 30.9 bits (61), Expect(4) = 5e-058
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 175 LKRYPKMSAYWFSKLLQ 125
>gb|DR052378.1|DR052378 RTCA1_4_F07.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_4_F07_A029 3', mRNA sequence
Length = 865
Score = 102 bits (218), Expect(4) = 5e-058
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +1
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 478 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 657
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 658 GVVYVDF 678
Score = 81.3 bits (171), Expect(4) = 5e-058
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +1 / +1
Query: 4 TRDQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLN 183
+ DQ AAQR DF +GW+L PI +G YP+SM + +G+ LP F+++ + ++ ID++G+N
Sbjct: 70 SEDQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVN 249
Query: 184 HYTSRLIAHHQNP 222
YT+ + + P
Sbjct: 250 QYTAYYMYDPKQP 288
Score = 67.0 bits (140), Expect(4) = 5e-058
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +1
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 346 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 483
Score = 30.9 bits (61), Expect(4) = 5e-058
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 685 LKRYPKMSAYWFSKLLQ 735
>gb|DR019640.1|DR019640 STRS1_31_H11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_H11_A034 3', mRNA sequence
Length = 794
Score = 102 bits (218), Expect(4) = 8e-058
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +2
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 407 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 586
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 587 GVVYVDF 607
Score = 80.8 bits (170), Expect(4) = 8e-058
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +1 / +2
Query: 10 DQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
DQ AAQR DF +GW+L PI +G YP+SM + +G+ LP F+++ + ++ ID++G+N Y
Sbjct: 5 DQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQY 184
Query: 190 TSRLIAHHQNP 222
T+ + + P
Sbjct: 185 TAYYMYDPKQP 217
Score = 67.0 bits (140), Expect(4) = 8e-058
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +2
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 275 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 412
Score = 30.9 bits (61), Expect(4) = 8e-058
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 614 LKRYPKMSAYWFSKLLQ 664
>gb|DR019670.1|DR019670 STRS1_31_D05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_D05_A034 5', mRNA sequence
Length = 756
Score = 102 bits (218), Expect(4) = 8e-058
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / -1
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 354 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 175
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 174 GVVYVDF 154
Score = 80.8 bits (170), Expect(4) = 8e-058
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +1 / -1
Query: 10 DQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
DQ AAQR DF +GW+L PI +G YP+SM + +G+ LP F+++ + ++ ID++G+N Y
Sbjct: 756 DQGAAQRSRDFHIGWFLHPITYGKYPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQY 577
Query: 190 TSRLIAHHQNP 222
T+ + + P
Sbjct: 576 TAYYMYDPKQP 544
Score = 67.0 bits (140), Expect(4) = 8e-058
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / -1
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 486 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 349
Score = 30.9 bits (61), Expect(4) = 8e-058
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 147 LKRYPKMSAYWFSKLLQ 97
>gb|AF072736.1|AF072736 Pinus contorta beta-glucosidase mRNA, complete cds
Length = 1909
Score = 160 bits (345), Expect(2) = 1e-057
Identities = 60/132 (45%), Positives = 90/132 (68%)
Frame = +1 / +3
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G SIGER + L +VP G+ K++ Y+ + Y++P I + ENG + ++ S+T+ + LND
Sbjct: 1287 GVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIIAENGYPESEESSSTLQENLNDV 1466
Query: 460 KRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHP 639
+R+ + L+ ++ AIK+G+DVRGYF WS LDNFEWA GYT RFG+ +VD+ R+P
Sbjct: 1467 RRIRFHGDCLSYLSAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDFISDQKRYP 1646
Query: 640 KASALWFSRLLK 675
K SA WF + L+
Sbjct: 1647 KLSAQWFRQFLQ 1682
Score = 83.1 bits (175), Expect(2) = 1e-057
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +1 / +3
Query: 10 DQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
++ A R + F L W+LDPI FGDYP+ MR+RLGS LP+ S + +R D++G+NHY
Sbjct: 1011 ERSAVDRILSFNLRWFLDPIVFGDYPQEMRERLGSRLPSISSELSAKLRGSFDYMGINHY 1190
Query: 190 TS 195
T+
Sbjct: 1191 TT 1196
>gb|CO369254.1|CO369254 RTK1_46_A07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_46_A07_A029 3', mRNA sequence
Length = 811
Score = 145 bits (312), Expect(2) = 3e-053
Identities = 57/133 (42%), Positives = 85/133 (63%)
Frame = +1 / +2
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLND 456
+G IG P GL +LLNY +YN+P +Y+TE G D D+ + ++ + +ND
Sbjct: 338 NGVFIGSTEGDNDFRSYPAGLSELLNYTKNRYNNPTVYITETGYADFDNGTTSLARAVND 517
Query: 457 TKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRH 636
RV Y +L+ + +AI+ G+DVRGY WS +D+FEW+ G+T RFG+ YVD + L R+
Sbjct: 518 PGRVKYHYQHLSHLREAIRAGSDVRGYLVWSLMDDFEWSFGFTYRFGLYYVDLNNHLKRY 697
Query: 637 PKASALWFSRLLK 675
+ASALWF R+L+
Sbjct: 698 ARASALWFKRILQ 736
Score = 83.5 bits (176), Expect(2) = 3e-053
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +1 / +2
Query: 10 DQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
D+ A QR IDF+LGW+LDP+ G YPESMR+ +G LP FS ++ + ++ DFIG N+Y
Sbjct: 62 DKRATQRAIDFRLGWFLDPLTSGKYPESMRRLVGRRLPRFSNEEAKDLKGSFDFIGFNYY 241
Query: 190 TSR 198
++
Sbjct: 242 ITQ 250
>gb|CO369338.1|CO369338 RTK1_46_A07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_46_A07_A029 5', mRNA sequence
Length = 805
Score = 145 bits (312), Expect(2) = 3e-053
Identities = 57/133 (42%), Positives = 85/133 (63%)
Frame = +1 / +1
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLND 456
+G IG P GL +LLNY +YN+P +Y+TE G D D+ + ++ + +ND
Sbjct: 328 NGVFIGSTEGDNDFRSYPAGLSELLNYTKNRYNNPTVYITETGYADFDNGTTSLARAVND 507
Query: 457 TKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRH 636
RV Y +L+ + +AI+ G+DVRGY WS +D+FEW+ G+T RFG+ YVD + L R+
Sbjct: 508 PGRVKYHYQHLSHLREAIRAGSDVRGYLVWSLMDDFEWSFGFTYRFGLYYVDLNNHLKRY 687
Query: 637 PKASALWFSRLLK 675
+ASALWF R+L+
Sbjct: 688 ARASALWFKRILQ 726
Score = 83.5 bits (176), Expect(2) = 3e-053
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +1 / +1
Query: 10 DQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
D+ A QR IDF+LGW+LDP+ G YPESMR+ +G LP FS ++ + ++ DFIG N+Y
Sbjct: 52 DKRATQRAIDFRLGWFLDPLTSGKYPESMRRLVGRRLPRFSNEEAKDLKGSFDFIGFNYY 231
Query: 190 TSR 198
++
Sbjct: 232 ITQ 240
>gb|DT636173.1|DT636173 EST1151104 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGO78 3' end, mRNA sequence
Length = 706
Score = 128 bits (274), Expect(2) = 3e-053
Identities = 48/75 (64%), Positives = 59/75 (78%)
Frame = +1 / +2
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G +IGERAASEWL IVPWG K+L ++ ++YN P IYVTENGMDDED + +DQ LNDT
Sbjct: 473 GNTIGERAASEWLYIVPWGFRKVLKWLTERYNRPPIYVTENGMDDEDSEITLLDQALNDT 652
Query: 460 KRVGYFNGYLNSVAQ 504
KRV YF GYL ++A+
Sbjct: 653 KRVNYFKGYLKALAE 697
Score = 100 bits (214), Expect(2) = 3e-053
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +1 / +2
Query: 10 DQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
D+ AAQRR +FQ GW+LDPIYFGDYP MR++LG LP FS + +R DF+GLNHY
Sbjct: 203 DKEAAQRRREFQFGWFLDPIYFGDYPAIMRKKLGDRLPQFSPDEVAVLRGSSDFLGLNHY 382
Query: 190 TSRLI 204
T+R +
Sbjct: 383 TTRYV 397
Score = 75.8 bits (159), Expect(2) = 6e-022
Identities = 38/68 (55%), Positives = 43/68 (63%)
Frame = -1 / -2
Query: 482 PLK*PTLFVSFRTWSIVADXXXXXSMPFSVT*ITGLLYFFTI*LSNL*RPQGTMTSHSDA 303
PLK* TLFVS R WS S+PFSVT*I GLLY + +P GT+ SHSDA
Sbjct: 675 PLK*FTLFVSLRAWSSNVISESSSSIPFSVT*IGGLLYLSVNHFNTFRKPHGTI*SHSDA 496
Query: 302 ALSPMLSP 279
ALSPM+ P
Sbjct: 495 ALSPMVFP 472
Score = 48.7 bits (100), Expect(2) = 6e-022
Identities = 30/58 (51%), Positives = 34/58 (58%)
Frame = -1 / -2
Query: 191 V**FSPIKSILFLMNSLSFSEKVGRSLPSR*RMLSG*SPKYIGSRYHPS*KSILRCAA 18
V** SP KS + S E G PS RM++G*SPKYIGSR P+* S CAA
Sbjct: 384 V**LSPRKSDDPRNTATSSGEN*GSRSPSFFRMIAG*SPKYIGSRNQPN*NSRRLCAA 211
>gb|CX712929.1|CX712929 RTPQ1_5_F12.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_5_F12_A032 5', mRNA sequence
Length = 836
Score = 162 bits (349), Expect(2) = 1e-051
Identities = 61/132 (46%), Positives = 90/132 (68%)
Frame = +1 / +3
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G SIGER + L +VP G+ K++ Y+ + Y++P I +TENG + ++ S+T+ + LND
Sbjct: 246 GVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENGYPESEESSSTLQENLNDV 425
Query: 460 KRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHP 639
+R+ + L+ + AIK+G+DVRGYF WS LDNFEWA GYT RFG+ +VD+ R+P
Sbjct: 426 RRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDFISDQKRYP 605
Query: 640 KASALWFSRLLK 675
K SA WF + L+
Sbjct: 606 KLSAQWFRQFLQ 641
Score = 61.1 bits (127), Expect(2) = 1e-051
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1 / +3
Query: 67 IYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHYTS 195
I FGDYP+ MR+RLGS LP+ S + +R D++G+NHYT+
Sbjct: 27 IVFGDYPQEMRERLGSRLPSISSELSAKLRGSFDYMGINHYTT 155
>gb|DR020312.1|DR020312 STRS1_36_C01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_C01_A034 3', mRNA sequence
Length = 903
Score = 150 bits (322), Expect(3) = 5e-051
Identities = 57/116 (49%), Positives = 83/116 (71%)
Frame = +1 / +1
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL +++Y +Y++P IY+TE+G D D+ + +++ LND+KRV Y +L+S+ QA
Sbjct: 352 PAGLRDVISYTKHRYDNPPIYITESGYGDFDNGTTPLERALNDSKRVKYHYEHLSSLLQA 531
Query: 508 IKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLK 675
I++GADVRGY AWS LD+ EW+ GY RFG+ YVDY D L R+ +ASA WF +L+
Sbjct: 532 IREGADVRGYVAWSLLDSLEWSSGYNYRFGLHYVDYHDNLKRYARASAQWFKTILR 699
Score = 60.2 bits (125), Expect(3) = 5e-051
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = +1 / +1
Query: 55 YLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHYTSRLIAHHQNP 222
+LDP+ G YP+SMR +G+ LP F+ ++ E ++ DF+G N+Y++ ++ NP
Sbjct: 73 FLDPLTSGKYPDSMRXLVGTRLPQFTIEEAEELKGSFDFLGFNYYSTDFTINNPNP 240
Score = 29.9 bits (59), Expect(3) = 5e-051
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 13 QIAAQRRIDFQLGWYL 60
Q A QR IDF++GWY+
Sbjct: 3 QQATQRAIDFRIGWYV 50
>gb|DR055729.1|DR055729 RTCA1_25_C02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_C02_A029 5', mRNA sequence
Length = 687
Score = 102 bits (218), Expect(4) = 1e-047
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / -3
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 355 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 176
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 175 GVVYVDF 155
Score = 67.0 bits (140), Expect(4) = 1e-047
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / -3
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 487 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 350
Score = 46.4 bits (95), Expect(4) = 1e-047
Identities = 15/47 (31%), Positives = 31/47 (65%)
Frame = +1 / -3
Query: 82 YPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHYTSRLIAHHQNP 222
YP+SM + +G+ LP F+++ + ++ ID++G+N YT+ + + P
Sbjct: 685 YPDSMVEIVGTRLPKFTKEQSQMVKGSIDYLGVNQYTAYYMYDPKQP 545
Score = 30.9 bits (61), Expect(4) = 1e-047
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / -3
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 148 LKRYPKMSAYWFSKLLQ 98
>gb|CO164776.1|CO164776 FLD1_50_F04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_F04_A029 3', mRNA sequence
Length = 751
Score = 95.9 bits (203), Expect(3) = 3e-044
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +1 / +1
Query: 271 WSSGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVL 450
+ +G +IG++A+S WL IVP G+ L+NYI ++YN+P + +TENGMDD ++ + L
Sbjct: 148 FKNGRAIGDKASSAWLYIVPHGIRSLMNYIKRRYNNPPVIITENGMDDPNNILIPLKNAL 327
Query: 451 NDTKRVGYFNGYLNSVAQAIKD 516
ND KR+ Y YL+++ AIK+
Sbjct: 328 NDQKRIKYHAHYLSNLFAAIKE 393
Score = 92.7 bits (196), Expect(3) = 3e-044
Identities = 35/61 (57%), Positives = 42/61 (68%)
Frame = +1 / +1
Query: 490 NSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRL 669
N A +DG +V GYF WS LDN+EWA GYT RFG+ +VDYK L+R+PKAS WF
Sbjct: 370 NLFAAIKEDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDYKHNLTRYPKASVQWFKCF 549
Query: 670 L 672
L
Sbjct: 550 L 552
Score = 29.0 bits (57), Expect(3) = 3e-044
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 151 IRNKIDFIGLNHYTS 195
++ +DF+G+NHYT+
Sbjct: 19 VKGSLDFVGINHYTT 63
>gb|DR387566.1|DR387566 RTHG1_22_E08.g2_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_22_E08_A029 5', mRNA sequence
Length = 607
Score = 100 bits (214), Expect(2) = 6e-044
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +1 / -1
Query: 10 DQIAAQRRIDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
D+ AAQRR +FQ GW+LDPIYFGDYP MR++LG LP FS + +R DF+GLNHY
Sbjct: 457 DKEAAQRRREFQFGWFLDPIYFGDYPAIMRKKLGDRLPQFSPDEVAVLRGSSDFLGLNHY 278
Query: 190 TSRLI 204
T+R +
Sbjct: 277 TTRYV 263
Score = 97.3 bits (206), Expect(2) = 6e-044
Identities = 37/61 (60%), Positives = 45/61 (73%)
Frame = +1 / -1
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G +IGERAASEWL IVPWG K+L ++ ++YN P IYVTENGMDDED + +DQ L
Sbjct: 187 GNTIGERAASEWLYIVPWGFRKVLKWLTERYNRPPIYVTENGMDDEDSEITLLDQALKIQ 8
Query: 460 K 462
K
Sbjct: 7 K 5
>gb|BG039942.1|BG039942 NXSI_101_H03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_101_H03 5' similar to Arabidopsis thaliana
sequence At5g54570 beta-glucosidase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 540
Score = 99.6 bits (211), Expect(3) = 1e-043
Identities = 36/77 (46%), Positives = 55/77 (71%)
Frame = +1 / +2
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G IGER AS WL +VPWG+ L+ YI ++Y++P I++TENG+DD + ++D+ L DT
Sbjct: 158 GVMIGERGASRWLYVVPWGIRSLMIYIKQRYDNPPIFITENGIDDTNSPLISLDKALQDT 337
Query: 460 KRVGYFNGYLNSVAQAI 510
KR+ Y YL++++ AI
Sbjct: 338 KRIDYHRDYLSNLSVAI 388
Score = 86.3 bits (182), Expect(3) = 1e-043
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +1 / +2
Query: 514 DGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALW 657
DG DVRGYF WS LDN+EW G+T RFG+ +VDY L+R+PKASA W
Sbjct: 395 DGCDVRGYFVWSLLDNWEWNSGFTVRFGLYFVDYXXNLTRYPKASADW 538
Score = 29.5 bits (58), Expect(3) = 1e-043
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 145 EFIRNKIDFIGLNHYTS 195
+ +R DF+G+NHYT+
Sbjct: 14 KLLRGSFDFVGINHYTT 64
>gb|CO199421.1|CO199421 GEO2_1_C06.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_C06_A032 3', mRNA sequence
Length = 870
Score = 153 bits (329), Expect(2) = 1e-042
Identities = 56/116 (48%), Positives = 83/116 (71%)
Frame = +1 / +3
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL ++NY +YN+P IY+TE G D D+ + + + LND+ R+ Y + +L+ + Q+
Sbjct: 243 PAGLRDVINYTKHRYNNPPIYITETGYADFDNGTTPLQRALNDSGRLKYHSEHLSHLLQS 422
Query: 508 IKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLK 675
IK+GADVRGY AWS +D+FEW+ GY RFG+ +VDYKD L R+P++SA WF +L+
Sbjct: 423 IKEGADVRGYIAWSLMDSFEWSSGYNYRFGLYHVDYKDNLKRYPRSSAHWFKHILR 590
Score = 40.0 bits (81), Expect(2) = 1e-042
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1 / +3
Query: 94 MRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHYTSRLIAHHQNP 222
+R+ + S LP F+ K+ + ++ DF+G N+YT++ + NP
Sbjct: 3 VRRLVKSRLPRFTAKEAKELKGSFDFLGYNYYTTQYTTSNPNP 131
>gb|CF477622.1|CF477622 RTWW3_9_B03.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_9_B03_A022 3', mRNA sequence
Length = 667
Score = 102 bits (218), Expect(4) = 9e-042
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +1
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 280 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 459
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 460 GVVYVDF 480
Score = 67.0 bits (140), Expect(4) = 9e-042
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +1
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 148 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 285
Score = 30.9 bits (61), Expect(4) = 9e-042
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 487 LKRYPKMSAYWFSKLLQ 537
Score = 26.3 bits (51), Expect(4) = 9e-042
Identities = 7/30 (23%), Positives = 18/30 (60%)
Frame = +1 / +1
Query: 133 EKDKEFIRNKIDFIGLNHYTSRLIAHHQNP 222
++ + ++ ID++G+N YT+ + + P
Sbjct: 1 KEQSQMVKGSIDYLGVNQYTAYYMYDPKQP 90
>gb|BX254352.1|BX254352 BX254352 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP097C12, mRNA sequence
Length = 664
Score = 96.4 bits (204), Expect(2) = 1e-041
Identities = 35/79 (44%), Positives = 55/79 (69%)
Frame = +1 / +2
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G IGER AS WL +VPWG+ + YI ++Y++P I +TENG+DD + ++D+ L DT
Sbjct: 104 GVMIGERGASRWLYVVPWGIRSSMIYIKQRYDNPPIIITENGIDDPNSPLISLDKALQDT 283
Query: 460 KRVGYFNGYLNSVAQAIKD 516
KR+ Y YL++++ AI++
Sbjct: 284 KRIDYHRDYLSNLSVAIRN 340
Score = 94.1 bits (199), Expect(2) = 1e-041
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = +1 / +2
Query: 514 DGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLKGEAAEN 693
DG DVRGYF WS LDN+EW G+T RFG+ +VDYK L+R+PKASA WF L +++
Sbjct: 341 DGCDVRGYFVWSLLDNWEWNSGFTVRFGLYFVDYKGNLTRYPKASADWFKSFLPKSKSKS 520
Query: 694 SYS 702
+ S
Sbjct: 521 TAS 529
>gb|CO361958.1|CO361958 NDL2_8_E08.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_E08_A029 3', mRNA sequence
Length = 786
Score = 170 bits (365), Expect = 2e-041
Identities = 68/135 (50%), Positives = 89/135 (65%)
Frame = +1 / +2
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL ++NY +YN+P IYVTE G D DD ++Q LND++RV Y + +L+ + +A
Sbjct: 161 PAGLKDIINYTKHRYNNPTIYVTETGYVDFDDGKTPLEQALNDSRRVMYHSEHLSELLEA 340
Query: 508 IKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLKGEAA 687
I +GAD+RGY WS LDNFEW+ GYT RFG+ YVDYKD L R+P+ASA WF +LK E
Sbjct: 341 ISEGADIRGYLVWSLLDNFEWSFGYTYRFGLYYVDYKDNLKRYPRASANWFRNILKQENL 520
Query: 688 ENSYS*SCHRLREQS 732
+ H L QS
Sbjct: 521 SSESQQRHHPL*VQS 565
>gb|CO162557.1|CO162557 FLD1_36_C02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_36_C02_A029 3', mRNA sequence
Length = 649
Score = 99.6 bits (211), Expect(2) = 2e-041
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +1 / +2
Query: 271 WSSGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVL 450
+ G++IG++A+S WL IVP G+ L+NYI ++YN+P + +TENGMDD +D + + L
Sbjct: 5 FKDGKAIGDKASSIWLYIVPQGIRSLMNYIKQRYNNPPVIITENGMDDSNDIFIPLKKAL 184
Query: 451 NDTKRVGYFNGYLNSVAQAIKD 516
D KR+ Y YL+++A AIK+
Sbjct: 185 KDQKRIKYLTDYLSNLAAAIKE 250
Score = 90.4 bits (191), Expect(2) = 2e-041
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +1 / +2
Query: 490 NSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRL 669
N A +DG +V GYF WS LDN+EWA GYT RFG+ +VDYK L+R+PK S WF
Sbjct: 227 NLAAAIKEDGCNVGGYFVWSLLDNWEWAAGYTSRFGLYFVDYKHNLTRYPKDSVQWFKCF 406
Query: 670 L 672
L
Sbjct: 407 L 409
>gb|BX250956.1|BX250956 BX250956 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP043D06, mRNA sequence
Length = 675
Score = 164 bits (352), Expect(2) = 9e-041
Identities = 61/132 (46%), Positives = 92/132 (69%)
Frame = +1 / +2
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G SIGER A + L +VP G+ K++ Y+ + Y++P+I +TENG + ++ S+T+ + L+D
Sbjct: 131 GVSIGERTAMDGLFVVPHGIQKIVEYVKEFYDNPIIIITENGYPESEESSSTLQENLSDV 310
Query: 460 KRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHP 639
+R+ + L+ + AIK+G+DVRGYF WS LDNFEWA GYT RFG+ +VD+ R+P
Sbjct: 311 RRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDFISAQKRYP 490
Query: 640 KASALWFSRLLK 675
K SA WF + L+
Sbjct: 491 KLSAQWFRQFLQ 526
Score = 23.5 bits (45), Expect(2) = 9e-041
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = +1 / +2
Query: 166 DFIGLNHYTS 195
D++G+NHYT+
Sbjct: 11 DYMGINHYTT 40
>gb|CX652916.1|CX652916 COLD1_62_F11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_F11_A029 3', mRNA sequence
Length = 805
Score = 138 bits (295), Expect(2) = 1e-040
Identities = 48/85 (56%), Positives = 66/85 (77%)
Frame = +1 / +3
Query: 418 DDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFG 597
++ ++D+ LNDT R+ Y + +L+ + QAI++GADVRG+FAWS +DNFEW GYT RFG
Sbjct: 192 ENSDPSLDEALNDTWRINYCSEHLHYILQAIREGADVRGFFAWSLMDNFEWGFGYTSRFG 371
Query: 598 IVYVDYKDGLSRHPKASALWFSRLL 672
+Y+DYKDGL R+PKASA W+ R L
Sbjct: 372 FIYIDYKDGLKRYPKASAHWYKRFL 446
Score = 49.2 bits (101), Expect(2) = 1e-040
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1 / +3
Query: 304 ASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
AS WL + GL LL YI ++YN+P I++TENG++D
Sbjct: 72 ASFWLYVYAPGLRDLLIYIKQRYNNPPIFITENGVND 182
>gb|DR081506.1|DR081506 RTFEPL1_30_D11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_30_D11_A029 3', mRNA sequence
Length = 761
Score = 102 bits (218), Expect(4) = 1e-040
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +2
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 254 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 433
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 434 GVVYVDF 454
Score = 67.0 bits (140), Expect(4) = 1e-040
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +2
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 122 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 259
Score = 30.9 bits (61), Expect(4) = 1e-040
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 461 LKRYPKMSAYWFSKLLQ 511
Score = 22.1 bits (42), Expect(4) = 1e-040
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1 / +2
Query: 163 IDFIGLNHYTSRLIAHHQNP 222
ID++G+N YT+ + + P
Sbjct: 5 IDYLGVNQYTAYYMYDPKQP 64
>gb|DR048637.1|DR048637 RTBOR1_10_E10.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E10_A029 3', mRNA sequence
Length = 837
Score = 165 bits (355), Expect = 4e-040
Identities = 61/91 (67%), Positives = 74/91 (81%)
Frame = +1 / +2
Query: 406 MDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYT 585
MDDED + +DQ LNDTKRV YF GYL ++A+AI++GADVRGYFAWS +DNFEW GYT
Sbjct: 2 MDDEDSEITLLDQALNDTKRVNYFKGYLKALAEAIREGADVRGYFAWSLIDNFEWGQGYT 181
Query: 586 KRFGIVYVDYKDGLSRHPKASALWFSRLLKG 678
KRFG+V+VDYKD L R+PK+SA WF+ L G
Sbjct: 182 KRFGLVFVDYKDDLKRYPKSSAHWFTSFLHG 274
>gb|DR014803.1|DR014803 HEAT1_51_E12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_E12_A029 5', mRNA sequence
Length = 858
Score = 160 bits (344), Expect(2) = 1e-039
Identities = 61/132 (46%), Positives = 89/132 (67%)
Frame = +1 / -3
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G SIGER + L +VP G+ K++ Y+ + Y++P I +TENG + + S+T+ + LND
Sbjct: 736 GVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENGYPESQEFSSTLQENLNDV 557
Query: 460 KRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHP 639
+R+ + L+ + AIK+G+DVRGYF WS LDNFEWA GYT RFG+ +VD+ R+P
Sbjct: 556 RRIRFHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDFISDQKRYP 377
Query: 640 KASALWFSRLLK 675
K SA WF + L+
Sbjct: 376 KLSAQWFRQFLQ 341
Score = 23.5 bits (45), Expect(2) = 1e-039
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = +1 / -3
Query: 166 DFIGLNHYTS 195
D++G+NHYT+
Sbjct: 856 DYMGINHYTT 827
>gb|CX646974.1|CX646974 COLD1_12_D12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_12_D12_A029 5', mRNA sequence
Length = 794
Score = 94.5 bits (200), Expect(2) = 1e-039
Identities = 36/61 (59%), Positives = 41/61 (67%)
Frame = +1 / +1
Query: 490 NSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRL 669
N A DG V GYFAWS LDN+EWA GYT RFG+ +VDY+ L+RHPKAS WF
Sbjct: 205 NLAAAIKDDGCKVGGYFAWSLLDNWEWAAGYTSRFGLYFVDYRHNLTRHPKASVKWFKCF 384
Query: 670 L 672
L
Sbjct: 385 L 387
Score = 89.0 bits (188), Expect(2) = 1e-039
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +1 / +1
Query: 289 IGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRV 468
IG++AAS WL G+ L+NYI ++YN+P + +TENGMDD ++ + + LND KR+
Sbjct: 1 IGDKAASAWLYPFSHGIRSLMNYIKQRYNNPPVIITENGMDDSNNILIPLKKALNDQKRI 180
Query: 469 GYFNGYLNSVAQAIKD 516
Y YL+++A AIKD
Sbjct: 181 KYHAHYLSNLAAAIKD 228
>gb|DR013586.1|DR013586 HEAT1_20_F02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_20_F02_A029 3', mRNA sequence
Length = 740
Score = 102 bits (218), Expect(3) = 3e-039
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +1
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 214 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 393
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 394 GVVYVDF 414
Score = 67.0 bits (140), Expect(3) = 3e-039
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +1
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 82 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 219
Score = 30.9 bits (61), Expect(3) = 3e-039
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +1
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 421 LKRYPKMSAYWFSKLLQ 471
>gb|CO162371.1|CO162371 FLD1_34_H05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_H05_A029 5', mRNA sequence
Length = 738
Score = 161 bits (347), Expect = 5e-039
Identities = 61/132 (46%), Positives = 90/132 (68%)
Frame = +1 / -3
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G SIGER + L +VP G+ K++ Y+ + Y++P I +TENG + ++ S+T+ + LND
Sbjct: 724 GVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENGYPESEESSSTLQENLNDV 545
Query: 460 KRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHP 639
+R+ + L+ + AIK+G+DVRGYF WS LDNFEWA GYT RFG+ +VD+ R+P
Sbjct: 544 RRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDFISDQKRYP 365
Query: 640 KASALWFSRLLK 675
K SA WF + L+
Sbjct: 364 KLSAQWFRQFLQ 329
>gb|DR080921.1|DR080921 RTFEPL1_26_D08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_26_D08_A029 3', mRNA sequence
Length = 707
Score = 161 bits (347), Expect = 5e-039
Identities = 61/132 (46%), Positives = 90/132 (68%)
Frame = +1 / +2
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G SIGER + L +VP G+ K++ Y+ + Y++P I +TENG + ++ S+T+ + LND
Sbjct: 89 GVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENGYPESEESSSTLQENLNDV 268
Query: 460 KRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHP 639
+R+ + L+ + AIK+G+DVRGYF WS LDNFEWA GYT RFG+ +VD+ R+P
Sbjct: 269 RRIRFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDFISDQKRYP 448
Query: 640 KASALWFSRLLK 675
K SA WF + L+
Sbjct: 449 KLSAQWFRQFLQ 484
>gb|DR024579.1|DR024579 STRS1_66_A03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_66_A03_A034 3', mRNA sequence
Length = 605
Score = 102 bits (218), Expect(3) = 1e-038
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +2
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 212 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 391
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 392 GVVYVDF 412
Score = 67.0 bits (140), Expect(3) = 1e-038
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1 / +2
Query: 277 SGESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
+G IG RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 80 NGVPIGPRANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 217
Score = 29.0 bits (57), Expect(3) = 1e-038
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 631 RHPKASALWFSRLLK 675
R+PK SA WFS+LL+
Sbjct: 425 RYPKMSAYWFSKLLQ 469
>gb|CF390726.1|CF390726 RTDR2_17_D05.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_17_D05_A021 5', mRNA
sequence
Length = 796
Score = 152 bits (327), Expect(2) = 5e-038
Identities = 57/116 (49%), Positives = 81/116 (69%)
Frame = +1 / +2
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL ++NY +YN+P IY+TE G D D+ + +++ L+D++RV Y + +L+ + +A
Sbjct: 206 PAGLRDVINYTKHRYNNPPIYITETGYADFDNGTTRLEEALHDSRRVEYHSQHLSYLLEA 385
Query: 508 IKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLK 675
I++GADVRGY WS LDNFEWA GY RFG+ Y+DY D L R+ + SA WF LLK
Sbjct: 386 IREGADVRGYVVWSLLDNFEWASGYDYRFGLYYIDYNDNLKRYARESAHWFRNLLK 553
Score = 25.8 bits (50), Expect(2) = 5e-038
Identities = 7/33 (21%), Positives = 19/33 (57%)
Frame = +1 / +2
Query: 130 SEKDKEFIRNKIDFIGLNHYTSRLIAHHQNPDD 228
S ++ + ++ DF+G N+Y++ ++ P +
Sbjct: 2 SSEEAKDLKGSFDFLGFNYYSTDFTINNPTPQN 100
>gb|CF668848.1|CF668848 RTCNT1_39_C01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_C01_A029 3', mRNA sequence
Length = 737
Score = 158 bits (339), Expect = 6e-038
Identities = 59/129 (45%), Positives = 88/129 (68%)
Frame = +1 / +1
Query: 289 IGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRV 468
IGER + L +VP G+ K++ Y+ + Y++P I +TENG + ++ S+T+ + LND +R+
Sbjct: 1 IGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENGYPESEESSSTLQENLNDVRRI 180
Query: 469 GYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKAS 648
+ L+ + AIK+G+DVRGYF WS LDNFEWA GYT RFG+ +VD+ R+PK S
Sbjct: 181 RFHGDCLSYLNAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDFISDQKRYPKLS 360
Query: 649 ALWFSRLLK 675
A WF + L+
Sbjct: 361 AQWFRQFLQ 387
>gb|BX679902.1|BX679902 BX679902 RS Pinus pinaster cDNA clone RS35H05, mRNA sequence
Length = 578
Score = 158 bits (339), Expect = 6e-038
Identities = 58/128 (45%), Positives = 89/128 (69%)
Frame = +1 / +2
Query: 292 GERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVG 471
GER A + L +VP G+ K++ Y+ + Y++P+I +TENG + ++ S+T+ + L+D +R+
Sbjct: 2 GERTAMDGLFVVPHGIQKIVEYVKEFYDNPIIIITENGYPESEESSSTLQENLSDVRRIR 181
Query: 472 YFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASA 651
+ L+ + AIK+G+DVRGYF WS LDNFEWA GYT RFG+ +VD+ R+PK SA
Sbjct: 182 FHGDCLSYLTAAIKNGSDVRGYFVWSLLDNFEWAFGYTIRFGLYHVDFISDQKRYPKLSA 361
Query: 652 LWFSRLLK 675
WF + L+
Sbjct: 362 QWFRQFLQ 385
>gb|CX652294.1|CX652294 COLD1_58_E05.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_58_E05_A029 3', mRNA sequence
Length = 502
Score = 102 bits (218), Expect(3) = 2e-037
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +3
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 117 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 296
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 297 GVVYVDF 317
Score = 61.1 bits (127), Expect(3) = 2e-037
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1 / +3
Query: 298 RAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
RA S WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 6 RANSNWLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 122
Score = 30.9 bits (61), Expect(3) = 2e-037
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 324 LKRYPKMSAYWFSKLLQ 374
>gb|DR685831.1|DR685831 EST1075908 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB853 3' end, mRNA sequence
Length = 526
Score = 79.4 bits (167), Expect(3) = 8e-037
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +1 / +2
Query: 280 GESIGERAASEWLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDT 459
G SIGER + L +VP G+ K++ Y+ + Y++P I +TENG + ++ S+T+ + LND
Sbjct: 212 GVSIGERTGMDGLFVVPHGIQKIVEYVKEFYDNPTIIITENGYPESEESSSTLQENLNDV 391
Query: 460 KRVGYFNGYLNSVAQAIKDG 519
+R+ + L+ + AIK+G
Sbjct: 392 RRIRFHGDCLSYLNAAIKNG 451
Score = 57.0 bits (118), Expect(3) = 8e-037
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 76 GDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHYTS 195
GDYP+ MR+RLGS LP+ S + +R D++G+NHYT+
Sbjct: 1 GDYPQEMRERLGSRLPSISSELSAKLRGSFDYMGINHYTT 120
Score = 56.1 bits (116), Expect(3) = 8e-037
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = +1 / +3
Query: 502 QAIKDGADVRGYFAWSFLDNFEWAMGYTKR 591
Q K G+DVRGYF WS LD FEWA GYT R
Sbjct: 435 QQSKMGSDVRGYFVWSLLDKFEWAFGYTIR 524
>gb|DR744663.1|DR744663 RTCU1_24_B09.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_B09_A029 3', mRNA sequence
Length = 727
Score = 153 bits (329), Expect = 1e-036
Identities = 56/116 (48%), Positives = 83/116 (71%)
Frame = +1 / +1
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL ++NYI +YN+P IY+TE G D D+ + + + LND+ R+ Y + +L+ + Q+
Sbjct: 157 PAGLRDVINYIKHRYNNPPIYITETGYADFDNGTTPLQRALNDSGRLKYHSEHLSHLLQS 336
Query: 508 IKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLK 675
IK+GADVRGY WS +D+FEW+ GY RFG+ +VDYKD L R+P++SA WF +L+
Sbjct: 337 IKEGADVRGYIIWSLMDSFEWSSGYNYRFGLYHVDYKDNLKRYPRSSAHWFKHILR 504
>gb|DR111231.1|DR111231 RTS1_16_F03.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_F03_A029 3', mRNA sequence
Length = 628
Score = 102 bits (218), Expect(3) = 5e-036
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1 / +3
Query: 415 EDDQSATIDQVLNDTKRVGYFNGYLNSVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRF 594
+D + T+ LNDT RV Y+ YL ++ A+ DGA+V GYFAWS LDNFEW GYT RF
Sbjct: 102 DDPGNVTLPAGLNDTIRVNYYKSYLQNLINAVNDGANVVGYFAWSLLDNFEWKSGYTSRF 281
Query: 595 GIVYVDY 615
G+VYVD+
Sbjct: 282 GVVYVDF 302
Score = 56.1 bits (116), Expect(3) = 5e-036
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +1 / +3
Query: 313 WLVIVPWGLHKLLNYIVKKYNSPVIYVTENGMDD 414
WL IVPWGL+K + Y+ + Y +P + ++ENGMDD
Sbjct: 6 WLYIVPWGLYKAVTYVKEHYGNPTMILSENGMDD 107
Score = 30.9 bits (61), Expect(3) = 5e-036
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 625 LSRHPKASALWFSRLLK 675
L R+PK SA WFS+LL+
Sbjct: 309 LKRYPKMSAYWFSKLLQ 359
>gb|DR743165.1|DR743165 RTCU1_14_B08.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_14_B08_A029 3', mRNA sequence
Length = 761
Score = 117 bits (251), Expect(2) = 6e-036
Identities = 49/125 (39%), Positives = 72/125 (57%)
Frame = +1 / +2
Query: 322 IVPWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVA 501
+VP + L YI + ++ I V ENG + ++ S + + LND R+ L V
Sbjct: 260 VVPQSMQAALEYIEDRSHNIPIIVYENGFSEHNNSSIPLSEALNDQFRMDLHQDVLQYVL 439
Query: 502 QAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLKGE 681
AI++G+DVRGYF W+ LD+FE GYT+ FG+ YVD+ D L R+PK SA W+ L+
Sbjct: 440 AAIRNGSDVRGYFIWTLLDDFEVLDGYTRSFGLHYVDFNDNLKRYPKLSAHWYKTFLQRR 619
Query: 682 AAENS 696
+ S
Sbjct: 620 ESRES 634
Score = 56.1 bits (116), Expect(2) = 6e-036
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +1 / +2
Query: 64 PIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFIGLNHY 189
P GDYP SMR +GS LP+F+++ + ++ +DFIG+NHY
Sbjct: 2 PFVSGDYPGSMRNIVGSRLPSFTKEQTQKLQGSLDFIGVNHY 127
>gb|CO364332.1|CO364332 RTK1_15_D02.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_15_D02_A029 3', mRNA sequence
Length = 863
Score = 102 bits (218), Expect(2) = 7e-036
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +1 / -3
Query: 514 DGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLKGE 681
+GAD+RGY WS LDNFEWA GY RFG+ YVDYKD L R+PKASA WF LK E
Sbjct: 390 EGADIRGYLVWSLLDNFEWAHGYNYRFGLYYVDYKDNLKRYPKASANWFREFLKQE 223
Score = 68.4 bits (143), Expect(2) = 7e-036
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = +1 / -1
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL ++NY +YN+P +YVTE G D DD + ++Q LND++RV Y + +L+ + +A
Sbjct: 662 PAGLKDIINYTKHRYNNPPLYVTETGYADFDDGTTPLEQALNDSRRVMYHSEHLSELLEA 483
Query: 508 IK 513
I+
Sbjct: 482 IR 477
>gb|CO364421.1|CO364421 RTK1_15_D02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_15_D02_A029 5', mRNA sequence
Length = 849
Score = 102 bits (218), Expect(2) = 7e-036
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +1 / -3
Query: 514 DGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLKGE 681
+GAD+RGY WS LDNFEWA GY RFG+ YVDYKD L R+PKASA WF LK E
Sbjct: 379 EGADIRGYLVWSLLDNFEWAHGYNYRFGLYYVDYKDNLKRYPKASANWFREFLKQE 212
Score = 68.4 bits (143), Expect(2) = 7e-036
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = +1 / -1
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL ++NY +YN+P +YVTE G D DD + ++Q LND++RV Y + +L+ + +A
Sbjct: 651 PAGLKDIINYTKHRYNNPPLYVTETGYADFDDGTTPLEQALNDSRRVMYHSEHLSELLEA 472
Query: 508 IK 513
I+
Sbjct: 471 IR 466
>gb|CX650807.1|CX650807 COLD1_48_F06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_48_F06_A029 3', mRNA sequence
Length = 594
Score = 150 bits (323), Expect = 9e-036
Identities = 55/116 (47%), Positives = 82/116 (70%)
Frame = +1 / +2
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL ++NYI +YN+P IY+TE G D D+ + + + LND+ R+ Y + +L+ + Q+
Sbjct: 29 PAGLRDVINYIKHRYNNPPIYITETGYADFDNGTTPLQRALNDSGRLKYHSEHLSHLLQS 208
Query: 508 IKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLK 675
IK+GADVR Y WS +D+FEW+ GY RFG+ +VDYKD L R+P++SA WF +L+
Sbjct: 209 IKEGADVRSYIIWSLMDSFEWSSGYNYRFGLYHVDYKDNLKRYPRSSAHWFKHILR 376
>gb|DR013536.1|DR013536 HEAT1_19_H11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_H11_A029 5', mRNA sequence
Length = 729
Score = 150 bits (322), Expect = 1e-035
Identities = 55/116 (47%), Positives = 81/116 (69%)
Frame = +1 / -2
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL ++NY +YN+P IY+TE G D D+ + + + LND+ R+ Y + +L+ + Q
Sbjct: 578 PAGLRGVINYTKHRYNNPPIYITETGYADFDNGTTPLQRALNDSGRLKYHSEHLSHLLQG 399
Query: 508 IKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLK 675
IK+GADVRGY WS +D+FEW+ GY RFG+ +VDYKD L R+P++SA WF +L+
Sbjct: 398 IKEGADVRGYIIWSLMDSFEWSSGYNYRFGLYHVDYKDNLKRYPRSSAHWFKHILR 231
>gb|DR385366.1|DR385366 RTHG1_8_F01.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_F01_A029 3', mRNA sequence
Length = 558
Score = 149 bits (321), Expect = 2e-035
Identities = 55/116 (47%), Positives = 80/116 (68%)
Frame = +1 / +2
Query: 328 PWGLHKLLNYIVKKYNSPVIYVTENGMDDEDDQSATIDQVLNDTKRVGYFNGYLNSVAQA 507
P GL ++NY +YN P IY+TE G D D+ + + + LND+ R+ Y + +L+ + Q
Sbjct: 35 PAGLRGVINYTKHRYNDPPIYITETGYADFDNGTTPLQRALNDSGRLKYHSEHLSHLLQG 214
Query: 508 IKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKDGLSRHPKASALWFSRLLK 675
IK+GADVRGY WS +D+FEW+ GY RFG+ +VDYKD L R+P++SA WF +L+
Sbjct: 215 IKEGADVRGYIIWSLMDSFEWSSGYNYRFGLYHVDYKDNLKRYPRSSAHWFKHILR 382
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 421,346,279
Number of Sequences: 355925
Number of extensions: 5407621
Number of successful extensions: 33550
Number of sequences better than 1.0e-020: 103
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 12562811285
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)