TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3092809.2.1
(652 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF401853.1|CF401853 RTWW1_15_G05.g1_A015 Well-watered lo... 76 3e-030
gb|CO158694.1|CO158694 FLD1_8_D01.g1_A029 Root flooded Pinu... 76 3e-030
gb|CF395373.1|CF395373 RTDS2_11_D01.b1_A021 Drought-stresse... 76 3e-030
gb|CF386518.1|CF386518 RTDR1_15_B09.b1_A015 Loblolly pine r... 76 3e-030
gb|DR072809.1|DR072809 RTDK1_28_F01.g1_A029 Roots, dark Pin... 76 3e-030
gb|DR092503.1|DR092503 STRR1_1_F08.g1_A033 Stem Response Re... 82 4e-030
gb|DR092416.1|DR092416 STRR1_1_F08.b1_A033 Stem Response Re... 82 4e-030
gb|CO173794.1|CO173794 NDL1_39_H04.b1_A029 Needles control ... 82 4e-030
gb|DR022130.1|DR022130 STRS1_49_C03.b1_A034 Shoot tip pitch... 85 5e-030
gb|DR096182.1|DR096182 STRR1_26_G07.b1_A033 Stem Response R... 85 5e-030
gb|CV032305.1|CV032305 RTNACL1_7_E11.b1_A029 Roots plus add... 85 5e-030
gb|DR118559.1|DR118559 RTMG1_17_F10.g1_A029 Roots minus mag... 77 5e-030
gb|CX647421.1|CX647421 COLD1_16_F04.b1_A029 Root cold Pinus... 85 5e-030
gb|CV031544.1|CV031544 RTNACL1_2_F02.b1_A029 Roots plus add... 77 5e-030
gb|DR021065.1|DR021065 STRS1_42_D06.b1_A034 Shoot tip pitch... 79 2e-029
gb|CO361481.1|CO361481 NDL2_5_C12.b1_A029 Needles control 2... 82 2e-029
gb|DR101585.1|DR101585 STRR1_74_H08.b1_A033 Stem Response R... 83 2e-029
gb|DR112029.1|DR112029 RTS1_25_H03.b1_A029 Roots minus sulf... 83 2e-029
gb|DR099239.1|DR099239 STRR1_54_D04.b1_A033 Stem Response R... 83 2e-029
gb|DR018019.1|DR018019 STRS1_20_B02.b1_A034 Shoot tip pitch... 83 2e-029
gb|DR020715.1|DR020715 STRS1_38_G06.g1_A034 Shoot tip pitch... 83 2e-029
gb|DR016741.1|DR016741 STRS1_11_H07.g1_A034 Shoot tip pitch... 83 3e-029
gb|DR016422.1|DR016422 STRS1_10_B04.b1_A034 Shoot tip pitch... 83 3e-029
gb|CX649157.1|CX649157 COLD1_33_G12.b1_A029 Root cold Pinus... 77 3e-029
gb|DR093618.1|DR093618 STRR1_9_H07.b1_A033 Stem Response Re... 83 3e-029
gb|CO200850.1|CO200850 RTCNT2_2_A11.b1_A029 Root control 2 ... 77 3e-029
gb|DR016499.1|DR016499 STRS1_10_B04.g1_A034 Shoot tip pitch... 83 5e-029
gb|CO201685.1|CO201685 RTCNT2_7_A08.g1_A029 Root control 2 ... 80 5e-029
gb|CF473291.1|CF473291 RTWW2_1_D11.g1_A021 Well-watered lob... 80 5e-029
gb|CF473203.1|CF473203 RTWW2_1_D11.b1_A021 Well-watered lob... 80 5e-029
gb|CX648223.1|CX648223 COLD1_27_G06.b1_A029 Root cold Pinus... 76 5e-029
gb|DR162396.1|DR162396 RTFE1_17_C05.g1_A029 Roots minus iro... 80 5e-029
gb|DR016909.1|DR016909 STRS1_12_H07.g1_A034 Shoot tip pitch... 83 2e-028
gb|CO166933.1|CO166933 FLD1_65_C05.g1_A029 Root flooded Pin... 76 2e-028
gb|CV036407.1|CV036407 RTNACL1_59_C04.b1_A029 Roots plus ad... 81 2e-028
gb|CV036480.1|CV036480 RTNACL1_59_C04.g1_A029 Roots plus ad... 81 4e-028
gb|CO168970.1|CO168970 NDL1_3_G01.g1_A029 Needles control P... 79 6e-028
gb|CX652138.1|CX652138 COLD1_57_E02.b1_A029 Root cold Pinus... 72 9e-028
gb|CO172267.1|CO172267 NDL1_28_C10.g1_A029 Needles control ... 74 1e-027
gb|CO170645.1|CO170645 NDL1_15_G04.g1_A029 Needles control ... 74 1e-027
gb|CO174624.1|CO174624 NDL1_45_E10.b1_A029 Needles control ... 75 1e-027
gb|DR079160.1|DR079160 RTFEPL1_9_B01.g1_A029 Roots plus add... 74 3e-027
gb|DR050766.1|DR050766 RTBOR1_25_C04.g1_A029 Roots plus add... 74 3e-027
gb|CO200100.1|CO200100 GEO2_5_A04.g1_A032 Root gravitropism... 74 3e-027
gb|CO370297.1|CO370297 RTK1_67_A09.b1_A029 Roots minus pota... 74 3e-027
gb|DR051228.1|DR051228 RTBOR1_28_C04.g1_A029 Roots plus add... 74 3e-027
gb|CO200088.1|CO200088 GEO2_5_G12.b1_A032 Root gravitropism... 74 3e-027
gb|DR060865.1|DR060865 RTNIT1_30_B09.g1_A029 Roots minus ni... 74 3e-027
gb|CV033139.1|CV033139 RTNACL1_20_D02.g1_A029 Roots plus ad... 74 3e-027
gb|CO197125.1|CO197125 GEO1_4_C01.b1_A029 Root gravitropism... 74 3e-027
gb|CF479481.1|CF479481 RTWW3_22_E07.g1_A022 Well-watered lo... 74 3e-027
gb|DR742224.1|DR742224 RTCU1_2_D01.g1_A029 Roots plus added... 74 3e-027
gb|DR742375.1|DR742375 RTCU1_3_D02.g2_A029 Roots plus added... 74 3e-027
gb|CF389408.1|CF389408 RTDR2_7_D02.b1_A021 Loblolly pine ro... 74 3e-027
gb|DR050496.1|DR050496 RTBOR1_23_H08.g1_A029 Roots plus add... 74 3e-027
gb|DR111095.1|DR111095 RTS1_15_E12.b1_A029 Roots minus sulf... 74 3e-027
gb|CF390585.1|CF390585 RTDR2_20_F04.b1_A021 Loblolly pine r... 74 3e-027
gb|CX647418.1|CX647418 COLD1_16_E12.b1_A029 Root cold Pinus... 74 3e-027
gb|CF479430.1|CF479430 RTWW3_22_E07.b1_A022 Well-watered lo... 74 3e-027
gb|DR168457.1|DR168457 RTPHOS1_25_C08.g1_A029 Roots minus p... 74 3e-027
gb|CF668437.1|CF668437 RTCNT1_36_B02.g1_A029 Root control P... 74 3e-027
gb|CF387124.1|CF387124 RTDR1_11_C09.b1_A015 Loblolly pine r... 74 3e-027
gb|CF389435.1|CF389435 RTDR2_7_D02.g1_A021 Loblolly pine ro... 74 3e-027
gb|CF400078.1|CF400078 RTWW1_3_H09.b1_A015 Well-watered lob... 74 3e-027
gb|CF479735.1|CF479735 RTWW3_11_C12.g1_A022 Well-watered lo... 74 3e-027
gb|DR159693.1|DR159693 RTFE1_1_A05.b1_A029 Roots minus iron... 78 1e-026
gb|CF663931.1|CF663931 RTCNT1_6_C08.b1_A029 Root control Pi... 78 1e-026
gb|DT631534.1|DT631534 EST1146465 Normalized pine embryo li... 76 4e-026
gb|DR096264.1|DR096264 STRR1_26_G07.g1_A033 Stem Response R... 85 5e-026
gb|DR057860.1|DR057860 RTNIT1_8_F07.b1_A029 Roots minus nit... 76 6e-026
gb|CF402837.1|CF402837 RTWW1_23_A11.b1_A015 Well-watered lo... 76 6e-026
gb|DR386779.1|DR386779 RTHG1_17_H07.b1_A029 Roots plus adde... 72 9e-026
gb|DR053139.1|DR053139 RTCA1_9_F01.b1_A029 Roots minus calc... 69 9e-026
gb|DR384247.1|DR384247 RTHG1_1_B07.b1_A029 Roots plus added... 72 1e-025
gb|DR090193.1|DR090193 RTAL1_13_G06.b1_A029 Roots plus adde... 72 1e-025
gb|DR386301.1|DR386301 RTHG1_14_E12.b1_A029 Roots plus adde... 72 1e-025
gb|CO196855.1|CO196855 GEO1_2_B08.b1_A029 Root gravitropism... 75 1e-025
gb|CO363359.1|CO363359 RTK1_9_F08.b1_A029 Roots minus potas... 74 2e-025
gb|CO364003.1|CO364003 RTK1_13_C10.b1_A029 Roots minus pota... 74 2e-025
gb|CF402819.1|CF402819 RTWW1_23_C07.b1_A015 Well-watered lo... 74 2e-025
gb|DR745196.1|DR745196 RTCU1_27_E06.g1_A029 Roots plus adde... 74 2e-025
gb|CO200019.1|CO200019 GEO2_5_A04.b1_A032 Root gravitropism... 74 3e-025
gb|CV032541.1|CV032541 RTNACL1_8_G10.g1_A029 Roots plus add... 70 6e-025
gb|DR069528.1|DR069528 RTDK1_7_F10.g1_A029 Roots, dark Pinu... 73 8e-025
gb|CV035051.1|CV035051 RTNACL1_13_G03.b1_A029 Roots plus ad... 73 8e-025
gb|DR069438.1|DR069438 RTDK1_7_F10.b1_A029 Roots, dark Pinu... 73 8e-025
gb|CF397483.1|CF397483 RTDS3_3_B05.g1_A022 Drought-stressed... 73 8e-025
gb|DR743744.1|DR743744 RTCU1_17_H06.g1_A029 Roots plus adde... 73 8e-025
gb|DR081773.1|DR081773 RTFEPL1_32_E02.b1_A029 Roots plus ad... 73 8e-025
gb|CF399221.1|CF399221 RTDS3_27_G05.b1_A022 Drought-stresse... 73 8e-025
gb|CX714776.1|CX714776 RTPQ1_26_E06.g1_A032 Roots treated w... 73 8e-025
gb|DR113001.1|DR113001 RTS1_32_F04.b1_A029 Roots minus sulf... 72 1e-024
gb|DR049633.1|DR049633 RTBOR1_18_B06.b1_A029 Roots plus add... 72 1e-024
gb|CF393745.1|CF393745 RTDS2_1_A09.b1_A021 Drought-stressed... 71 1e-024
gb|CF401633.1|CF401633 RTWW1_14_F02.b1_A015 Well-watered lo... 70 4e-024
gb|CF477151.1|CF477151 RTWW3_6_C04.b1_A022 Well-watered lob... 70 4e-024
gb|CV031568.1|CV031568 RTNACL1_2_H05.b1_A029 Roots plus add... 70 4e-024
gb|CO176070.1|CO176070 NDL1_59_A09.g1_A029 Needles control ... 76 5e-024
gb|DR094700.1|DR094700 STRR1_16_E07.b1_A033 Stem Response R... 69 9e-024
gb|CO363443.1|CO363443 RTK1_9_F08.g1_A029 Roots minus potas... 74 2e-023
gb|DR099944.1|DR099944 STRR1_60_F05.b1_A033 Stem Response R... 64 3e-023
gb|DR057948.1|DR057948 RTNIT1_8_F07.g1_A029 Roots minus nit... 76 4e-023
gb|DT636699.1|DT636699 EST1151630 Normalized pine embryo li... 82 4e-023
gb|CF396189.1|CF396189 RTDS2_15_H11.g1_A021 Drought-stresse... 76 6e-023
gb|CO174881.1|CO174881 NDL1_46_H02.g1_A029 Needles control ... 77 2e-022
gb|DN446164.1|DN446164 EST941963 Sequencing ESTs from loblo... 68 3e-022
gb|CX652210.1|CX652210 COLD1_57_E02.g1_A029 Root cold Pinus... 72 4e-022
gb|CF477654.1|CF477654 RTWW3_9_G10.b1_A022 Well-watered lob... 62 4e-022
gb|CF386933.1|CF386933 RTDR1_9_D01.g1_A015 Loblolly pine ro... 62 6e-022
gb|CO198754.1|CO198754 GEO1_16_F03.b1_A029 Root gravitropis... 62 6e-022
gb|CO409072.1|CO409072 EST839457 Sequencing ESTs from loblo... 68 7e-022
gb|DR090596.1|DR090596 RTAL1_16_D11.b1_A029 Roots plus adde... 71 8e-022
gb|DT625981.1|DT625981 EST1157905 Sequencing ESTs from lobl... 68 1e-021
gb|CO413999.1|CO413999 EST844384 Sequencing ESTs from loblo... 68 1e-021
gb|DN447561.1|DN447561 EST943360 Sequencing ESTs from loblo... 68 1e-021
gb|CF390625.1|CF390625 RTDR2_20_F04.g1_A021 Loblolly pine r... 74 1e-021
gb|CF479642.1|CF479642 RTWW3_11_E11.b1_A022 Well-watered lo... 62 2e-021
gb|CF474692.1|CF474692 RTWW2_7_D07.b1_A021 Well-watered lob... 62 2e-021
gb|CF478471.1|CF478471 RTWW3_20_C04.b1_A022 Well-watered lo... 62 2e-021
gb|DR078907.1|DR078907 RTFEPL1_7_D07.g1_A029 Roots plus add... 67 7e-021
gb|DR014779.1|DR014779 HEAT1_51_C11.g1_A029 Root at 37 C fo... 67 9e-021
gb|DR159768.1|DR159768 RTFE1_1_A05.g1_A029 Roots minus iron... 81 9e-021
gb|DR161057.1|DR161057 RTFE1_9_C11.g1_A029 Roots minus iron... 67 9e-021
>gb|CF401853.1|CF401853 RTWW1_15_G05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_15_G05_A015 5', mRNA sequence
Length = 749
Score = 76.2 bits (160), Expect(2) = 3e-030
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / +1
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AF ANLKGV EDVA+A L+LASDEA+YVS NL+VDGGFT VN++ + *L
Sbjct: 490 AFFNTSANLKGVTLKEEDVAEAGLFLASDEAKYVSGHNLVVDGGFTVVNHSRGMYRP*L 666
Score = 75.8 bits (159), Expect(2) = 3e-030
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2 / +1
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
H YTASKHAV+GLTK+ AAELG++G+RVN VSP AV TAL++ G
Sbjct: 304 HAYTASKHAVIGLTKNAAAELGKYGIRVNAVSPDAVATALTVRFFKPG 447
>gb|CO158694.1|CO158694 FLD1_8_D01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_D01_A029 5', mRNA sequence
Length = 714
Score = 76.2 bits (160), Expect(2) = 3e-030
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / -2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AF ANLKGV EDVA+A L+LASDEA+YVS NL+VDGGFT VN++ + *L
Sbjct: 236 AFFNTSANLKGVTLKEEDVAEAGLFLASDEAKYVSGHNLVVDGGFTVVNHSRGMYRP*L 60
Score = 75.8 bits (159), Expect(2) = 3e-030
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2 / -2
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
H YTASKHAV+GLTK+ AAELG++G+RVN VSP AV TAL++ G
Sbjct: 422 HAYTASKHAVIGLTKNAAAELGKYGIRVNAVSPDAVATALTVRFFKPG 279
>gb|CF395373.1|CF395373 RTDS2_11_D01.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_D01_A021 3', mRNA sequence
Length = 598
Score = 76.2 bits (160), Expect(2) = 3e-030
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / +3
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AF ANLKGV EDVA+A L+LASDEA+YVS NL+VDGGFT VN++ + *L
Sbjct: 333 AFFNTSANLKGVTLKEEDVAEAGLFLASDEAKYVSGHNLVVDGGFTVVNHSRGMYRP*L 509
Score = 75.8 bits (159), Expect(2) = 3e-030
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2 / +3
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
H YTASKHAV+GLTK+ AAELG++G+RVN VSP AV TAL++ G
Sbjct: 147 HAYTASKHAVIGLTKNAAAELGKYGIRVNAVSPDAVATALTVRFFKPG 290
>gb|CF386518.1|CF386518 RTDR1_15_B09.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_15_B09_A015 3', mRNA
sequence
Length = 581
Score = 76.2 bits (160), Expect(2) = 3e-030
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / +2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AF ANLKGV EDVA+A L+LASDEA+YVS NL+VDGGFT VN++ + *L
Sbjct: 263 AFFNTSANLKGVTLKEEDVAEAGLFLASDEAKYVSGHNLVVDGGFTVVNHSRGMYRP*L 439
Score = 75.8 bits (159), Expect(2) = 3e-030
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2 / +2
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
H YTASKHAV+GLTK+ AAELG++G+RVN VSP AV TAL++ G
Sbjct: 77 HAYTASKHAVIGLTKNAAAELGKYGIRVNAVSPDAVATALTVRFFKPG 220
>gb|DR072809.1|DR072809 RTDK1_28_F01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_28_F01_A029 5', mRNA sequence
Length = 553
Score = 76.2 bits (160), Expect(2) = 3e-030
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / -3
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AF ANLKGV EDVA+A L+LASDEA+YVS NL+VDGGFT VN++ + *L
Sbjct: 233 AFFNTSANLKGVTLKEEDVAEAGLFLASDEAKYVSGHNLVVDGGFTVVNHSRGMYRP*L 57
Score = 75.8 bits (159), Expect(2) = 3e-030
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2 / -3
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
H YTASKHAV+GLTK+ AAELG++G+RVN VSP AV TAL++ G
Sbjct: 419 HAYTASKHAVIGLTKNAAAELGKYGIRVNAVSPDAVATALTVRFFKPG 276
>gb|DR092503.1|DR092503 STRR1_1_F08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_F08_A033 5', mRNA sequence
Length = 909
Score = 82.2 bits (173), Expect(2) = 4e-030
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +2 / +2
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPYAV TAL +L QG
Sbjct: 503 PYAYTASKHAIIGLTKNGAAELGKYGIRVNAVSPYAVATALINMYLKQG 649
Score = 69.3 bits (145), Expect(2) = 4e-030
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +2 / +2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
A ANL+G EDVA+A LYLASDEA+YVS NL+VDGGF+ VN++ + +
Sbjct: 692 ALANSVANLQGPTLKAEDVAEAGLYLASDEAKYVSGHNLVVDGGFSVVNHSWKLY 856
>gb|DR092416.1|DR092416 STRR1_1_F08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_F08_A033 3', mRNA sequence
Length = 839
Score = 82.2 bits (173), Expect(2) = 4e-030
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPYAV TAL +L QG
Sbjct: 219 PYAYTASKHAIIGLTKNGAAELGKYGIRVNAVSPYAVATALINMYLKQG 365
Score = 69.3 bits (145), Expect(2) = 4e-030
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +2 / +3
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
A ANL+G EDVA+A LYLASDEA+YVS NL+VDGGF+ VN++ + +
Sbjct: 408 ALANSVANLQGPTLKAEDVAEAGLYLASDEAKYVSGHNLVVDGGFSVVNHSWKLY 572
>gb|CO173794.1|CO173794 NDL1_39_H04.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_39_H04_A029 3', mRNA sequence
Length = 706
Score = 82.2 bits (173), Expect(2) = 4e-030
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +2 / +2
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPYAV TAL +L QG
Sbjct: 116 PYAYTASKHAIIGLTKNGAAELGKYGIRVNAVSPYAVATALINMYLKQG 262
Score = 69.3 bits (145), Expect(2) = 4e-030
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +2 / +2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
A ANL+G EDVA+A LYLASDEA+YVS NL+VDGGF+ VN++ + +
Sbjct: 305 ALANSVANLQGPTLKAEDVAEAGLYLASDEAKYVSGHNLVVDGGFSVVNHSWKLY 469
>gb|DR022130.1|DR022130 STRS1_49_C03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_49_C03_A034 3', mRNA sequence
Length = 791
Score = 85.4 bits (180), Expect(2) = 5e-030
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG A + KD
Sbjct: 291 PYSYTASKHAILGLTKNAAAELGKYGIRVNTVSPYGVATALAVQYFKQGDDASISEKDKA 470
Query: 233 AFVG 244
A G
Sbjct: 471 AMEG 482
Score = 65.7 bits (137), Expect(2) = 5e-030
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 483 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 632
>gb|DR096182.1|DR096182 STRR1_26_G07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_G07_A033 3', mRNA sequence
Length = 782
Score = 85.4 bits (180), Expect(2) = 5e-030
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +2 / +2
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG A + KD
Sbjct: 317 PYSYTASKHAILGLTKNAAAELGKYGIRVNTVSPYGVATALAVQYFKQGDDASISEKDKA 496
Query: 233 AFVG 244
A G
Sbjct: 497 AMEG 508
Score = 65.7 bits (137), Expect(2) = 5e-030
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +2
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 509 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 658
>gb|CV032305.1|CV032305 RTNACL1_7_E11.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_E11_A029 3', mRNA sequence
Length = 770
Score = 85.4 bits (180), Expect(2) = 5e-030
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +2 / +1
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG A + KD
Sbjct: 295 PYSYTASKHAILGLTKNAAAELGKYGIRVNTVSPYGVATALAVQYFKQGDDASISEKDKA 474
Query: 233 AFVG 244
A G
Sbjct: 475 AMEG 486
Score = 65.7 bits (137), Expect(2) = 5e-030
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +1
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 487 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 636
>gb|DR118559.1|DR118559 RTMG1_17_F10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_17_F10_A029 5', mRNA sequence
Length = 687
Score = 76.7 bits (161), Expect(2) = 5e-030
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = +2 / -2
Query: 62 YTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
YTASKHAV+GLTK+ AAELG+ G+RVN VSPYA+ TAL++ + QG
Sbjct: 503 YTASKHAVIGLTKNGAAELGKFGIRVNAVSPYALATALTVQNFKQG 366
Score = 74.4 bits (156), Expect(2) = 5e-030
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +2 / -2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
AF ANL+G PEDVA+A LYLASDEA+YVS NL+VDGGF+ N++ R +
Sbjct: 329 AFYNRFANLQGTTLKPEDVAEAGLYLASDEAKYVSGHNLVVDGGFSVTNHSWRLY 165
>gb|CX647421.1|CX647421 COLD1_16_F04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_16_F04_A029 3', mRNA sequence
Length = 643
Score = 85.4 bits (180), Expect(2) = 5e-030
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG A + KD
Sbjct: 108 PYSYTASKHAILGLTKNAAAELGKYGIRVNTVSPYGVATALAVQYFKQGDDASISEKDKA 287
Query: 233 AFVG 244
A G
Sbjct: 288 AMEG 299
Score = 65.7 bits (137), Expect(2) = 5e-030
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 300 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 449
>gb|CV031544.1|CV031544 RTNACL1_2_F02.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_F02_A029 3', mRNA sequence
Length = 623
Score = 76.7 bits (161), Expect(2) = 5e-030
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = +2 / +1
Query: 62 YTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
YTASKHAV+GLTK+ AAELG+ G+RVN VSPYA+ TAL++ + QG
Sbjct: 79 YTASKHAVIGLTKNGAAELGKFGIRVNAVSPYALATALTVQNFKQG 216
Score = 74.4 bits (156), Expect(2) = 5e-030
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +2 / +1
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
AF ANL+G PEDVA+A LYLASDEA+YVS NL+VDGGF+ N++ R +
Sbjct: 253 AFYNRFANLQGTTLKPEDVAEAGLYLASDEAKYVSGHNLVVDGGFSVTNHSWRLY 417
>gb|DR021065.1|DR021065 STRS1_42_D06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_D06_A034 3', mRNA sequence
Length = 844
Score = 79.0 bits (166), Expect(2) = 2e-029
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDA 217
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY + T LS+ +L +G A
Sbjct: 291 PYSYTASKHAIIGLTKNGAAELGKYGIRVNVVSPYGLATPLSVQYLKEGDATSSA 455
Score = 70.3 bits (147), Expect(2) = 2e-029
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = +2 / +3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
F ANL+G EDVA+A LYLASDEA+YVS NL+VDGG T VN++ R +
Sbjct: 492 FCSSVANLEGAILTVEDVAEAGLYLASDEAKYVSGHNLVVDGGITVVNHSWRTY 653
>gb|CO361481.1|CO361481 NDL2_5_C12.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_5_C12_A029 3', mRNA sequence
Length = 861
Score = 82.2 bits (173), Expect(2) = 2e-029
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +2 / -2
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPYAV TAL +L QG
Sbjct: 656 PYAYTASKHAIIGLTKNGAAELGKYGIRVNAVSPYAVATALVNMYLKQG 510
Score = 66.6 bits (139), Expect(2) = 2e-029
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +2 / -2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
A ANL+G EDVA+A LYLASDEA+YVS NL+VDGG + VN++ + +
Sbjct: 467 ALANSVANLQGPTLKAEDVAEAGLYLASDEAKYVSGHNLVVDGGISVVNHSWKLY 303
>gb|DR101585.1|DR101585 STRR1_74_H08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_H08_A033 3', mRNA sequence
Length = 828
Score = 83.1 bits (175), Expect(2) = 2e-029
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +2 / +2
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG + + KD
Sbjct: 323 PYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATALAVQYFKQGDASSISEKDKA 502
Query: 233 AFVG 244
A G
Sbjct: 503 AMEG 514
Score = 65.7 bits (137), Expect(2) = 2e-029
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +2
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 515 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 664
>gb|DR112029.1|DR112029 RTS1_25_H03.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_25_H03_A029 3', mRNA sequence
Length = 808
Score = 83.1 bits (175), Expect(2) = 2e-029
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +2 / +1
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG + + KD
Sbjct: 349 PYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATALAVQYFKQGDASSISEKDKA 528
Query: 233 AFVG 244
A G
Sbjct: 529 AMEG 540
Score = 65.7 bits (137), Expect(2) = 2e-029
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +1
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 541 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 690
>gb|DR099239.1|DR099239 STRR1_54_D04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_D04_A033 3', mRNA sequence
Length = 790
Score = 83.1 bits (175), Expect(2) = 2e-029
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG + + KD
Sbjct: 180 PYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATALAVQYFKQGDASSISEKDKA 359
Query: 233 AFVG 244
A G
Sbjct: 360 AMEG 371
Score = 65.7 bits (137), Expect(2) = 2e-029
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 372 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 521
>gb|DR018019.1|DR018019 STRS1_20_B02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_B02_A034 3', mRNA sequence
Length = 696
Score = 83.1 bits (175), Expect(2) = 2e-029
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG + + KD
Sbjct: 189 PYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATALAVQYFKQGDASSISEKDKA 368
Query: 233 AFVG 244
A G
Sbjct: 369 AMEG 380
Score = 65.7 bits (137), Expect(2) = 2e-029
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 381 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 530
>gb|DR020715.1|DR020715 STRS1_38_G06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_38_G06_A034 5', mRNA sequence
Length = 692
Score = 83.1 bits (175), Expect(2) = 2e-029
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +2 / -2
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG + + KD
Sbjct: 529 PYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATALAVQYFKQGDASSISEKDKA 350
Query: 233 AFVG 244
A G
Sbjct: 349 AMEG 338
Score = 65.7 bits (137), Expect(2) = 2e-029
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / -2
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 337 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 188
>gb|DR016741.1|DR016741 STRS1_11_H07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_H07_A034 5', mRNA sequence
Length = 888
Score = 82.6 bits (174), Expect(2) = 3e-029
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+R+N VSPY V TAL++ + QG + + KD
Sbjct: 372 PYSYTASKHAIIGLTKNGAAELGKYGIRLNTVSPYGVATALAVQYFKQGDASSISEKDKA 551
Query: 233 AFVG 244
A G
Sbjct: 552 AMEG 563
Score = 65.7 bits (137), Expect(2) = 3e-029
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 564 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 713
>gb|DR016422.1|DR016422 STRS1_10_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_10_B04_A034 3', mRNA sequence
Length = 850
Score = 82.6 bits (174), Expect(2) = 3e-029
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+R+N VSPY V TAL++ + QG + + KD
Sbjct: 204 PYSYTASKHAIIGLTKNGAAELGKYGIRLNTVSPYGVATALAVQYFKQGDASSISEKDKA 383
Query: 233 AFVG 244
A G
Sbjct: 384 AMEG 395
Score = 65.7 bits (137), Expect(2) = 3e-029
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 396 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 545
>gb|CX649157.1|CX649157 COLD1_33_G12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_33_G12_A029 3', mRNA sequence
Length = 777
Score = 76.7 bits (161), Expect(2) = 3e-029
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = +2 / +2
Query: 62 YTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
YTASKHAV+GLTK+ AAELG+ G+RVN VSPYA+ TAL++ + QG
Sbjct: 245 YTASKHAVIGLTKNGAAELGKFGIRVNAVSPYALATALTVQNFKQG 382
Score = 71.6 bits (150), Expect(2) = 3e-029
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2 / +2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
AF ANL+G P DVA+A LYLASDEA+YVS NL+VDGGF+ N++ R +
Sbjct: 419 AFYNRFANLQGTTLKPADVAEAGLYLASDEAKYVSGHNLVVDGGFSVTNHSWRLY 583
>gb|DR093618.1|DR093618 STRR1_9_H07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_9_H07_A033 3', mRNA sequence
Length = 758
Score = 82.6 bits (174), Expect(2) = 3e-029
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +2 / +2
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+R+N VSPY V TAL++ + QG + + KD
Sbjct: 188 PYSYTASKHAIIGLTKNGAAELGKYGIRLNTVSPYGVATALAVQYFKQGDASSISEKDKA 367
Query: 233 AFVG 244
A G
Sbjct: 368 AMEG 379
Score = 65.7 bits (137), Expect(2) = 3e-029
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +2
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 380 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 529
>gb|CO200850.1|CO200850 RTCNT2_2_A11.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_A11_A029 3', mRNA sequence
Length = 741
Score = 76.7 bits (161), Expect(2) = 3e-029
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = +2 / +1
Query: 62 YTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
YTASKHAV+GLTK+ AAELG+ G+RVN VSPYA+ TAL++ + QG
Sbjct: 235 YTASKHAVIGLTKNGAAELGKFGIRVNAVSPYALATALTVQNFKQG 372
Score = 71.6 bits (150), Expect(2) = 3e-029
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2 / +1
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
AF ANL+G P DVA+A LYLASDEA+YVS NL+VDGGF+ N++ R +
Sbjct: 409 AFYNRFANLQGTTLKPADVAEAGLYLASDEAKYVSGHNLVVDGGFSVTNHSWRLY 573
>gb|DR016499.1|DR016499 STRS1_10_B04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_10_B04_A034 5', mRNA sequence
Length = 937
Score = 82.6 bits (174), Expect(2) = 5e-029
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +2 / +1
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+R+N VSPY V TAL++ + QG + + KD
Sbjct: 598 PYSYTASKHAIIGLTKNGAAELGKYGIRLNTVSPYGVATALAVQYFKQGDASSISEKDKA 777
Query: 233 AFVG 244
A G
Sbjct: 778 AMEG 789
Score = 65.2 bits (136), Expect(2) = 5e-029
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +2 / +1
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
F ANL+G ED+A+A LYLA DE++YVS NL+VDGGFT VN+
Sbjct: 790 FCDSIANLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNH 936
>gb|CO201685.1|CO201685 RTCNT2_7_A08.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_A08_A029 5', mRNA sequence
Length = 760
Score = 79.9 bits (168), Expect(2) = 5e-029
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+R+N VSPY V TAL++ + QG + + +D
Sbjct: 150 PYSYTASKHAILGLTKNGAAELGKYGIRLNTVSPYGVATALAVQYFKQGDASSISEEDKA 329
Query: 233 AFVG 244
A G
Sbjct: 330 AMEG 341
Score = 68.0 bits (142), Expect(2) = 5e-029
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +2 / +3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLASDE++YVS NL+VDGGFT VN++
Sbjct: 342 FCNSIANLQGHTLKAEDIAEAGLYLASDESKYVSGHNLVVDGGFTVVNHS 491
>gb|CF473291.1|CF473291 RTWW2_1_D11.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_1_D11_A021 5', mRNA sequence
Length = 736
Score = 79.9 bits (168), Expect(2) = 5e-029
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2 / +1
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+R+N VSPY V TAL++ + QG + + +D
Sbjct: 214 PYSYTASKHAILGLTKNGAAELGKYGIRLNTVSPYGVATALAVQYFKQGDASSISEEDKA 393
Query: 233 AFVG 244
A G
Sbjct: 394 AMEG 405
Score = 68.0 bits (142), Expect(2) = 5e-029
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +2 / +1
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLASDE++YVS NL+VDGGFT VN++
Sbjct: 406 FCNSIANLQGHTLKAEDIAEAGLYLASDESKYVSGHNLVVDGGFTVVNHS 555
>gb|CF473203.1|CF473203 RTWW2_1_D11.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_1_D11_A021 3', mRNA sequence
Length = 694
Score = 79.9 bits (168), Expect(2) = 5e-029
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2 / +1
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+R+N VSPY V TAL++ + QG + + +D
Sbjct: 28 PYSYTASKHAILGLTKNGAAELGKYGIRLNTVSPYGVATALAVQYFKQGDASSISEEDKA 207
Query: 233 AFVG 244
A G
Sbjct: 208 AMEG 219
Score = 68.0 bits (142), Expect(2) = 5e-029
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +2 / +1
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLASDE++YVS NL+VDGGFT VN++
Sbjct: 220 FCNSIANLQGHTLKAEDIAEAGLYLASDESKYVSGHNLVVDGGFTVVNHS 369
>gb|CX648223.1|CX648223 COLD1_27_G06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_G06_A029 3', mRNA sequence
Length = 686
Score = 76.2 bits (160), Expect(2) = 5e-029
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / +1
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AF ANLKGV EDVA+A L+LASDEA+YVS NL+VDGGFT VN++ + *L
Sbjct: 433 AFFNTSANLKGVTLKEEDVAEAGLFLASDEAKYVSGHNLVVDGGFTVVNHSRGMYRP*L 609
Score = 71.6 bits (150), Expect(2) = 5e-029
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +2 / +1
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
H YTASKHAV+GLTK+ AA LG++G+RVN VSP AV TAL++ G
Sbjct: 247 HAYTASKHAVIGLTKNAAA*LGKYGIRVNAVSPDAVATALTVRFFKPG 390
>gb|DR162396.1|DR162396 RTFE1_17_C05.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_17_C05_A029 5', mRNA sequence
Length = 559
Score = 79.9 bits (168), Expect(2) = 5e-029
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2 / -3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+R+N VSPY V TAL++ + QG + + +D
Sbjct: 548 PYSYTASKHAILGLTKNGAAELGKYGIRLNTVSPYGVATALAVQYFKQGDASSISEEDKA 369
Query: 233 AFVG 244
A G
Sbjct: 368 AMEG 357
Score = 68.0 bits (142), Expect(2) = 5e-029
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +2 / -3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+G ED+A+A LYLASDE++YVS NL+VDGGFT VN++
Sbjct: 356 FCNSIANLQGHTLKAEDIAEAGLYLASDESKYVSGHNLVVDGGFTVVNHS 207
>gb|DR016909.1|DR016909 STRS1_12_H07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_12_H07_A034 5', mRNA sequence
Length = 766
Score = 82.6 bits (174), Expect(2) = 2e-028
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +2 / +1
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+R+N VSPY V TAL++ + QG + + KD
Sbjct: 325 PYSYTASKHAIIGLTKNGAAELGKYGIRLNTVSPYGVATALAVQYFKQGDASSISEKDKA 504
Query: 233 AFVG 244
A G
Sbjct: 505 AMEG 516
Score = 63.4 bits (132), Expect(2) = 2e-028
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +2 / +1
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F A+L+G ED+A+A LYLA DE++YVS NL+VDGGFT VN++
Sbjct: 517 FCDSIADLQGHTLKAEDIAEAGLYLAGDESKYVSGHNLVVDGGFTVVNHS 666
>gb|CO166933.1|CO166933 FLD1_65_C05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_65_C05_A029 5', mRNA sequence
Length = 864
Score = 75.8 bits (159), Expect(2) = 2e-028
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2 / -1
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
H YTASKHAV+GLTK+ AAELG++G+RVN VSP AV TAL++ G
Sbjct: 408 HAYTASKHAVIGLTKNAAAELGKYGIRVNAVSPDAVATALTVRFFKPG 265
Score = 69.8 bits (146), Expect(2) = 2e-028
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +2 / -1
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFT 370
AF ANLKGV EDVA+A L+LASDEA+YVS NL+VDGGFT
Sbjct: 222 AFFNTSANLKGVTLKEEDVAEAGLFLASDEAKYVSGHNLVVDGGFT 85
>gb|CV036407.1|CV036407 RTNACL1_59_C04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_C04_A029 3', mRNA sequence
Length = 836
Score = 81.3 bits (171), Expect(2) = 2e-028
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG + + +D
Sbjct: 348 PYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATALAVQYFKQGDASSISEEDKA 527
Query: 233 AFVG 244
A G
Sbjct: 528 AMEG 539
Score = 64.3 bits (134), Expect(2) = 2e-028
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
F ANL+ ED+A+A LYLASDE++YVS NL+VDGGFT VN++
Sbjct: 540 FCNSIANLQEHTLKAEDIAEAGLYLASDESKYVSGHNLVVDGGFTVVNHS 689
>gb|CV036480.1|CV036480 RTNACL1_59_C04.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_59_C04_A029 5', mRNA sequence
Length = 847
Score = 81.3 bits (171), Expect(2) = 4e-028
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +2 / +2
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFL 232
P+ YTASKHA++GLTK+ AAELG++G+RVN VSPY V TAL++ + QG + + +D
Sbjct: 512 PYSYTASKHAILGLTKNGAAELGKYGIRVNTVSPYGVATALAVQYFKQGDASSISEEDKA 691
Query: 233 AFVG 244
A G
Sbjct: 692 AMEG 703
Score = 63.4 bits (132), Expect(2) = 4e-028
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +2 / +2
Query: 236 FVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVN 379
F ANL+ ED+A+A LYLASDE++YVS NL+VDGGFT VN
Sbjct: 704 FCNSIANLQEHTLKAEDIAEAGLYLASDESKYVSGHNLVVDGGFTVVN 847
>gb|CO168970.1|CO168970 NDL1_3_G01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_3_G01_A029 5', mRNA sequence
Length = 746
Score = 79.0 bits (166), Expect(2) = 6e-028
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = +2 / +1
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
+ YTASKHA++GLTK+ AAELG++G+RVN VSPYAV TAL +L QG
Sbjct: 250 YAYTASKHAIIGLTKNGAAELGKYGIRVNAVSPYAVATALLNMYLKQG 393
Score = 65.2 bits (136), Expect(2) = 6e-028
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +2 / +1
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
A ANL+G EDVA+A LYLASDEA+YVS NL++DGG + VN++ + +
Sbjct: 436 ALANSVANLQGPTLKAEDVAEAGLYLASDEAKYVSGHNLVLDGGISVVNHSWKLY 600
>gb|CX652138.1|CX652138 COLD1_57_E02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_E02_A029 3', mRNA sequence
Length = 750
Score = 72.1 bits (151), Expect(3) = 9e-028
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +2 / +3
Query: 53 PHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHL 190
P+ YTASKHAV+GLTKS AAELG++G+RVN +S Y V TA+ + +L
Sbjct: 297 PYAYTASKHAVLGLTKSGAAELGKYGIRVNAISSYRVATAVIVNYL 434
Score = 63.8 bits (133), Expect(3) = 9e-028
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +2 / +3
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
AF NL+G ED A+A LYLASDE++YVS NL+VDGG T V+++
Sbjct: 489 AFCNSNINLQGTTLTEEDTAEAGLYLASDESKYVSGHNLVVDGGITVVSHS 641
Score = 25.4 bits (49), Expect(3) = 9e-028
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1 / +2
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH GQR RR RLHG+
Sbjct: 245 GLHNQYGQRWGNIRRICAIRLHGL 316
>gb|CO172267.1|CO172267 NDL1_28_C10.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_28_C10_A029 5', mRNA sequence
Length = 782
Score = 74.4 bits (156), Expect(2) = 1e-027
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +2 / +2
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
+ P+ YTASKHA++GL K+ AAELG++G+RVN VSP + TAL + +L QG
Sbjct: 344 SAPYAYTASKHAIIGLVKNGAAELGKYGIRVNAVSPSGMATALVVNYLKQG 496
Score = 68.4 bits (143), Expect(2) = 1e-027
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +2 / +2
Query: 251 ANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
ANL+G EDVA+A LYLASDEA+YVS NL+VDGG T VN++ R +
Sbjct: 557 ANLQGPTLKVEDVAEAGLYLASDEAKYVSGHNLVVDGGITVVNHSWRLY 703
>gb|CO170645.1|CO170645 NDL1_15_G04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_15_G04_A029 5', mRNA sequence
Length = 762
Score = 74.4 bits (156), Expect(2) = 1e-027
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +2 / +3
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
+ P+ YTASKHA++GL K+ AAELG++G+RVN VSP + TAL + +L QG
Sbjct: 342 SAPYAYTASKHAIIGLVKNGAAELGKYGIRVNAVSPSGMATALVVNYLKQG 494
Score = 68.4 bits (143), Expect(2) = 1e-027
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +2 / +3
Query: 251 ANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
ANL+G EDVA+A LYLASDEA+YVS NL+VDGG T VN++ R +
Sbjct: 555 ANLQGPTLKVEDVAEAGLYLASDEAKYVSGHNLVVDGGITVVNHSWRLY 701
>gb|CO174624.1|CO174624 NDL1_45_E10.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_45_E10_A029 3', mRNA sequence
Length = 600
Score = 74.8 bits (157), Expect(2) = 1e-027
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +2 / +2
Query: 65 TASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQG 199
TASKHA++GLTK+ AAELG++G+RVN VSPYAV TAL +L QG
Sbjct: 2 TASKHAIIGLTKNGAAELGKYGIRVNAVSPYAVATALVNMYLKQG 136
Score = 68.0 bits (142), Expect(2) = 1e-027
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +2 / +2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAF 397
A G ANL+G EDVA+A LYLASDEA+YVS NL++DGG + VN++ + +
Sbjct: 179 ALANGVANLQGPTLKAEDVAEAGLYLASDEAKYVSGHNLVLDGGISVVNHSWKLY 343
>gb|DR079160.1|DR079160 RTFEPL1_9_B01.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_B01_A029 5', mRNA sequence
Length = 894
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
+ P+ YTASKHAV+GLTK+ AAELG++G+RVN VSP AV T + + GA + +
Sbjct: 537 SAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATPFTAMMMRGGADSSPVSEM 358
Query: 227 FLAFVGGEANLKG 265
A + G N G
Sbjct: 357 EKAAIEGHCNRIG 319
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2 / -1
Query: 254 NLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
NL+G EDVA+A LYLA DEA+YVS NL+VDGG T VN++
Sbjct: 318 NLQGPTLKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHS 187
Score = 23.5 bits (45), Expect(3) = 3e-027
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -3
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH + Q + RR P R+HG+
Sbjct: 583 GLHNLNQQPCKYSRRICPIRIHGL 512
>gb|DR050766.1|DR050766 RTBOR1_25_C04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_C04_A029 5', mRNA sequence
Length = 874
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2 / -3
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
+ P+ YTASKHAV+GLTK+ AAELG++G+RVN VSP AV T + + GA + +
Sbjct: 605 SAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATPFTAMMMRGGADSSPVSEM 426
Query: 227 FLAFVGGEANLKG 265
A + G N G
Sbjct: 425 EKAAIEGHCNRIG 387
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2 / -3
Query: 254 NLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
NL+G EDVA+A LYLA DEA+YVS NL+VDGG T VN++
Sbjct: 386 NLQGPTLKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHS 255
Score = 23.5 bits (45), Expect(3) = 3e-027
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -2
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH + Q + RR P R+HG+
Sbjct: 651 GLHNLNQQPCKYSRRICPIRIHGL 580
>gb|CO200100.1|CO200100 GEO2_5_A04.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_A04_A032 5', mRNA sequence
Length = 868
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
+ P+ YTASKHAV+GLTK+ AAELG++G+RVN VSP AV T + + GA + +
Sbjct: 574 SAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATPFTAMMMRGGADSSPVSEM 395
Query: 227 FLAFVGGEANLKG 265
A + G N G
Sbjct: 394 EKAAIEGHCNRIG 356
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2 / -1
Query: 254 NLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
NL+G EDVA+A LYLA DEA+YVS NL+VDGG T VN++
Sbjct: 355 NLQGPTLKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHS 224
Score = 23.5 bits (45), Expect(3) = 3e-027
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -3
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH + Q + RR P R+HG+
Sbjct: 620 GLHNLNQQPCKYSRRICPIRIHGL 549
>gb|CO370297.1|CO370297 RTK1_67_A09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_A09_A029 3', mRNA sequence
Length = 832
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2 / +2
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
+ P+ YTASKHAV+GLTK+ AAELG++G+RVN VSP AV T + + GA + +
Sbjct: 269 SAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATPFTAMMMRGGADSSPVSEM 448
Query: 227 FLAFVGGEANLKG 265
A + G N G
Sbjct: 449 EKAAIEGHCNRIG 487
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2 / +2
Query: 254 NLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
NL+G EDVA+A LYLA DEA+YVS NL+VDGG T VN++
Sbjct: 488 NLQGPTLKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHS 619
Score = 23.5 bits (45), Expect(3) = 3e-027
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / +1
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH + Q + RR P R+HG+
Sbjct: 223 GLHNLNQQPCKYSRRICPIRIHGL 294
>gb|DR051228.1|DR051228 RTBOR1_28_C04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_28_C04_A029 5', mRNA sequence
Length = 824
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2 / -1
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
+ P+ YTASKHAV+GLTK+ AAELG++G+RVN VSP AV T + + GA + +
Sbjct: 605 SAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATPFTAMMMRGGADSSPVSEM 426
Query: 227 FLAFVGGEANLKG 265
A + G N G
Sbjct: 425 EKAAIEGHCNRIG 387
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2 / -1
Query: 254 NLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
NL+G EDVA+A LYLA DEA+YVS NL+VDGG T VN++
Sbjct: 386 NLQGPTLKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHS 255
Score = 23.5 bits (45), Expect(3) = 3e-027
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -3
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH + Q + RR P R+HG+
Sbjct: 651 GLHNLNQQPCKYSRRICPIRIHGL 580
>gb|CO200088.1|CO200088 GEO2_5_G12.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_G12_A032 3', mRNA sequence
Length = 815
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2 / +1
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
+ P+ YTASKHAV+GLTK+ AAELG++G+RVN VSP AV T + + GA + +
Sbjct: 229 SAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATPFTAMMMRGGADSSPVSEM 408
Query: 227 FLAFVGGEANLKG 265
A + G N G
Sbjct: 409 EKAAIEGHCNRIG 447
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2 / +1
Query: 254 NLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
NL+G EDVA+A LYLA DEA+YVS NL+VDGG T VN++
Sbjct: 448 NLQGPTLKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHS 579
Score = 23.5 bits (45), Expect(3) = 3e-027
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / +3
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH + Q + RR P R+HG+
Sbjct: 183 GLHNLNQQPCKYSRRICPIRIHGL 254
>gb|DR060865.1|DR060865 RTNIT1_30_B09.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_B09_A029 5', mRNA sequence
Length = 793
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2 / -3
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
+ P+ YTASKHAV+GLTK+ AAELG++G+RVN VSP AV T + + GA + +
Sbjct: 581 SAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATPFTAMMMRGGADSSPVSEM 402
Query: 227 FLAFVGGEANLKG 265
A + G N G
Sbjct: 401 EKAAIEGHCNRIG 363
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2 / -3
Query: 254 NLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
NL+G EDVA+A LYLA DEA+YVS NL+VDGG T VN++
Sbjct: 362 NLQGPTLKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHS 231
Score = 23.5 bits (45), Expect(3) = 3e-027
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -2
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH + Q + RR P R+HG+
Sbjct: 627 GLHNLNQQPCKYSRRICPIRIHGL 556
>gb|CV033139.1|CV033139 RTNACL1_20_D02.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_20_D02_A029 5', mRNA sequence
Length = 779
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2 / -2
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
+ P+ YTASKHAV+GLTK+ AAELG++G+RVN VSP AV T + + GA + +
Sbjct: 616 SAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATPFTAMMMRGGADSSPVSEM 437
Query: 227 FLAFVGGEANLKG 265
A + G N G
Sbjct: 436 EKAAIEGHCNRIG 398
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2 / -2
Query: 254 NLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
NL+G EDVA+A LYLA DEA+YVS NL+VDGG T VN++
Sbjct: 397 NLQGPTLKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHS 266
Score = 23.5 bits (45), Expect(3) = 3e-027
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -1
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH + Q + RR P R+HG+
Sbjct: 662 GLHNLNQQPCKYSRRICPIRIHGL 591
>gb|CO197125.1|CO197125 GEO1_4_C01.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_4_C01_A029 3', mRNA sequence
Length = 772
Score = 74.4 bits (156), Expect(3) = 3e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +2 / +2
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
+ P+ YTASKHAV+GLTK+ AAELG++G+RVN VSP AV T + + GA + +
Sbjct: 161 SAPYAYTASKHAVIGLTKNGAAELGKYGIRVNAVSPSAVATPFTAMMMRGGADSSPVSEM 340
Query: 227 FLAFVGGEANLKG 265
A + G N G
Sbjct: 341 EKAAIEGHCNRIG 379
Score = 61.6 bits (128), Expect(3) = 3e-027
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2 / +2
Query: 254 NLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNN 385
NL+G EDVA+A LYLA DEA+YVS NL+VDGG T VN++
Sbjct: 380 NLQGPTLKVEDVAEAGLYLAGDEAKYVSGHNLVVDGGTTVVNHS 511
Score = 23.5 bits (45), Expect(3) = 3e-027
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / +1
Query: 1 GLHRVAGQRGQRHRRDGPARLHGV 72
GLH + Q + RR P R+HG+
Sbjct: 115 GLHNLNQQPCKYSRRICPIRIHGL 186
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 270,603,074
Number of Sequences: 355925
Number of extensions: 3266496
Number of successful extensions: 41315
Number of sequences better than 1.0e-020: 131
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 8842493780
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)