TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3070863.2.1
(992 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX648124.1|CX648124 COLD1_26_E02.g1_A029 Root cold Pinus... 351 6e-096
gb|DR051934.1|DR051934 RTCA1_1_H06.b1_A029 Roots minus calc... 351 6e-096
gb|DT627059.1|DT627059 EST1160135 Sequencing ESTs from lobl... 351 6e-096
gb|CO163734.1|CO163734 FLD1_43_A09.g1_A029 Root flooded Pin... 350 1e-095
gb|CO165478.1|CO165478 FLD1_54_F12.g1_A029 Root flooded Pin... 349 2e-095
gb|CO363997.1|CO363997 RTK1_13_C03.b1_A029 Roots minus pota... 341 6e-093
gb|DR691509.1|DR691509 EST1081596 Normalized pine embryo li... 338 3e-092
gb|DR011905.1|DR011905 HEAT1_8_E01.g1_A029 Root at 37 C for... 337 8e-092
gb|DN462146.1|DN462146 EST957945 Sequencing ESTs from loblo... 333 1e-090
gb|DR060310.1|DR060310 RTNIT1_27_C03.b1_A029 Roots minus ni... 328 3e-089
gb|DR094471.1|DR094471 STRR1_14_F10.g1_A033 Stem Response R... 328 3e-089
gb|CV032648.1|CV032648 RTNACL1_17_B07.g1_A029 Roots plus ad... 326 2e-088
gb|DT627318.1|DT627318 EST1160394 Sequencing ESTs from lobl... 201 2e-087
gb|DN465658.1|DN465658 EST961457 Sequencing ESTs from loblo... 201 2e-087
gb|CX650832.1|CX650832 COLD1_48_H10.b1_A029 Root cold Pinus... 311 4e-085
gb|DR071417.1|DR071417 RTDK1_19_E11.g1_A029 Roots, dark Pin... 308 5e-083
gb|BX248871.1|BX248871 BX248871 Pinus pinaster differenciat... 301 6e-081
gb|CO172567.1|CO172567 NDL1_30_B07.g1_A029 Needles control ... 297 6e-080
gb|DR689840.1|DR689840 EST1079926 Normalized pine embryo li... 293 1e-078
gb|DR692028.1|DR692028 EST1082115 Normalized pine embryo li... 288 5e-077
gb|DR180318.1|DR180318 RTMNUT1_27_G07.g1_A029 Roots minus m... 167 5e-076
gb|DR013096.1|DR013096 HEAT1_17_A09.b1_A029 Root at 37 C fo... 264 7e-070
gb|DR060394.1|DR060394 RTNIT1_27_C03.g1_A029 Roots minus ni... 257 1e-067
gb|DR052017.1|DR052017 RTCA1_1_H06.g1_A029 Roots minus calc... 249 2e-065
gb|CO364078.1|CO364078 RTK1_13_C03.g1_A029 Roots minus pota... 243 1e-063
gb|DR071340.1|DR071340 RTDK1_19_E11.b1_A029 Roots, dark Pin... 241 7e-063
gb|DT635813.1|DT635813 EST1150744 Normalized pine embryo li... 240 1e-062
gb|DR744925.1|DR744925 RTCU1_25_G07.g1_A029 Roots plus adde... 158 6e-062
gb|DR683029.1|DR683029 EST1073105 Normalized pine embryo li... 198 8e-062
gb|CV144691.1|CV144691 EST855900 Sequencing ESTs from loblo... 237 1e-061
gb|DT631306.1|DT631306 EST1146237 Normalized pine embryo li... 198 8e-061
gb|CO163657.1|CO163657 FLD1_43_A09.b1_A029 Root flooded Pin... 229 2e-059
gb|DR022767.1|DR022767 STRS1_53_G12.b1_A034 Shoot tip pitch... 229 2e-059
gb|DR094390.1|DR094390 STRR1_14_F10.b1_A033 Stem Response R... 229 3e-059
gb|BX252904.1|BX252904 BX252904 Pinus pinaster differenciat... 222 3e-057
gb|BG317773.1|BG317773 NXPV_005_E08_F NXPV (Nsf Xylem Plani... 218 6e-056
gb|DR180238.1|DR180238 RTMNUT1_27_G07.b1_A029 Roots minus m... 152 1e-054
gb|DR102633.1|DR102633 STRR1_82_D05.g1_A033 Stem Response R... 210 9e-054
gb|DR013166.1|DR013166 HEAT1_17_A09.g1_A029 Root at 37 C fo... 207 9e-053
gb|BX681596.1|BX681596 BX681596 RS Pinus pinaster cDNA clon... 201 7e-051
gb|DR013810.1|DR013810 HEAT1_21_E01.g1_A029 Root at 37 C fo... 185 5e-046
gb|BE810234.1|BE810234 NXCI_061_H01_F NXCI (Nsf Xylem Compr... 167 9e-041
gb|BF186012.1|BF186012 NXCI_132_B02_F NXCI (Nsf Xylem Compr... 155 3e-037
gb|CX648043.1|CX648043 COLD1_26_E02.b1_A029 Root cold Pinus... 152 4e-036
gb|BX680985.1|BX680985 BX680985 RS Pinus pinaster cDNA clon... 150 2e-035
gb|DR744848.1|DR744848 RTCU1_25_G07.b1_A029 Roots plus adde... 145 5e-034
gb|CX650915.1|CX650915 COLD1_48_H10.g1_A029 Root cold Pinus... 138 8e-032
gb|DR097420.1|DR097420 STRR1_34_C04.g3_A033 Stem Response R... 136 2e-031
gb|BF221218.1|BF221218 NXCI_156_B05_F NXCI (Nsf Xylem Compr... 126 3e-028
gb|BF220797.1|BF220797 NXCI_151_H04_F NXCI (Nsf Xylem Compr... 125 4e-028
gb|BE997133.1|BE997133 NXCI_104_C09_F NXCI (Nsf Xylem Compr... 124 1e-027
gb|BF221405.1|BF221405 NXCI_165_D02_F NXCI (Nsf Xylem Compr... 118 7e-026
gb|BF169742.1|BF169742 NXCI_128_E06_F NXCI (Nsf Xylem Compr... 105 5e-022
>gb|CX648124.1|CX648124 COLD1_26_E02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_E02_A029 5', mRNA sequence
Length = 903
Score = 351 bits (760), Expect = 6e-096
Identities = 154/255 (60%), Positives = 180/255 (70%)
Frame = +1 / +1
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 88 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGID 267
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 268 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 447
Query: 415 KASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDT 594
KA+ILL+QDA+ HL + Y PE + MYGVTKTAL GLTKALA EM P+T
Sbjct: 448 KATILLVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNT 627
Query: 595 RVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITA 774
RVN +APGFVPT FA FL +E I+ + ERT L RLG DM YIT
Sbjct: 628 RVNTVAPGFVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITG 807
Query: 775 ETIVVAGGVQSRL*I 819
ET+VVAGG+ SRL*I
Sbjct: 808 ETLVVAGGMPSRL*I 852
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / +3
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 282 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 461
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 462 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 641
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 642 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 821
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 822 SWRNAIKAVDWPLGFLYL 875
Score = 110 bits (235), Expect(2) = 8e-048
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -2
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 851 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 672
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 671 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 498
Score = 100 bits (214), Expect(2) = 8e-048
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 452 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 273
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 272 RTSIPLALSFSTASPTFFCFRDETTT 195
Score = 69.3 bits (145), Expect(2) = 5e-022
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / -1
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 852 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 673
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 672 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 526
Score = 55.6 bits (115), Expect(2) = 5e-022
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = -3 / -1
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 486 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 307
Query: 273 LLCVGDVADGTNRGDTLGPEPLH 205
L+ G++A + + G + H
Sbjct: 306 LVSTGNMASHSQNINPFGSQLFH 238
>gb|DR051934.1|DR051934 RTCA1_1_H06.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_1_H06_A029 3', mRNA sequence
Length = 889
Score = 351 bits (760), Expect = 6e-096
Identities = 154/255 (60%), Positives = 180/255 (70%)
Frame = +1 / -2
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 846 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGID 667
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 666 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 487
Query: 415 KASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDT 594
KA+ILL+QDA+ HL + Y PE + MYGVTKTAL GLTKALA EM P+T
Sbjct: 486 KATILLVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNT 307
Query: 595 RVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITA 774
RVN +APGFVPT FA FL +E I+ + ERT L RLG DM YIT
Sbjct: 306 RVNTVAPGFVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITG 127
Query: 775 ETIVVAGGVQSRL*I 819
ET+VVAGG+ SRL*I
Sbjct: 126 ETLVVAGGMPSRL*I 82
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / -1
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 652 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 473
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 472 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 293
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 292 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 113
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 112 SWRNAIKAVDWPLGFLYL 59
Score = 110 bits (235), Expect(2) = 8e-048
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / +2
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 83 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 262
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 263 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 436
Score = 100 bits (214), Expect(2) = 8e-048
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / +2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 482 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 661
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 662 RTSIPLALSFSTASPTFFCFRDETTT 739
Score = 69.3 bits (145), Expect(2) = 5e-022
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / +1
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 82 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 261
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 262 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 408
Score = 55.6 bits (115), Expect(2) = 5e-022
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = -3 / +1
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 448 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 627
Query: 273 LLCVGDVADGTNRGDTLGPEPLH 205
L+ G++A + + G + H
Sbjct: 628 LVSTGNMASHSQNINPFGSQLFH 696
>gb|DT627059.1|DT627059 EST1160135 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAU42 5' end, mRNA sequence
Length = 895
Score = 351 bits (760), Expect = 6e-096
Identities = 154/255 (60%), Positives = 180/255 (70%)
Frame = +1 / +1
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 16 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGID 195
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 196 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 375
Query: 415 KASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDT 594
KA+ILL+QDA+ HL + Y PE + MYGVTKTAL GLTKALA EM P+T
Sbjct: 376 KATILLVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNT 555
Query: 595 RVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITA 774
RVN +APGFVPT FA FL +E I+ + ERT L RLG DM YIT
Sbjct: 556 RVNTVAPGFVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITG 735
Query: 775 ETIVVAGGVQSRL*I 819
ET+VVAGG+ SRL*I
Sbjct: 736 ETLVVAGGMPSRL*I 780
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / +3
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 210 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 389
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 390 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 569
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 570 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 749
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 750 SWRNAIKAVDWPLGFLYL 803
Score = 110 bits (235), Expect(2) = 8e-048
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -3
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 779 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 600
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 599 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 426
Score = 100 bits (214), Expect(2) = 8e-048
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 380 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 201
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 200 RTSIPLALSFSTASPTFFCFRDETTT 123
Score = 69.3 bits (145), Expect(2) = 5e-022
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / -2
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 780 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 601
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 600 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 454
Score = 55.6 bits (115), Expect(2) = 5e-022
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = -3 / -2
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 414 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 235
Query: 273 LLCVGDVADGTNRGDTLGPEPLH 205
L+ G++A + + G + H
Sbjct: 234 LVSTGNMASHSQNINPFGSQLFH 166
>gb|CO163734.1|CO163734 FLD1_43_A09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_43_A09_A029 5', mRNA sequence
Length = 818
Score = 350 bits (758), Expect = 1e-095
Identities = 153/250 (61%), Positives = 178/250 (71%)
Frame = +1 / +3
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI +G
Sbjct: 12 KRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGIDVLGVA 191
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVKA+IL
Sbjct: 192 CHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVKATIL 371
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QDA+ HL + Y PE + MYGVTKTAL GLTKALA EM P+TRVN +
Sbjct: 372 LVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTV 551
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FA FL +E I+ + ERT L RLG DM YIT ET+VV
Sbjct: 552 APGFVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVV 731
Query: 790 AGGVQSRL*I 819
AGG+ SRL*I
Sbjct: 732 AGGMPSRL*I 761
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / +2
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 191 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 370
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 371 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 550
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 551 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 730
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 731 SWRNAIKAVDWPLGFLYL 784
Score = 110 bits (235), Expect(2) = 8e-048
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -2
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 760 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 581
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 580 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 407
Score = 100 bits (214), Expect(2) = 8e-048
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 361 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 182
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 181 RTSIPLALSFSTASPTFFCFRDETTT 104
Score = 69.3 bits (145), Expect(2) = 5e-022
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / -1
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 761 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 582
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 581 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 435
Score = 55.6 bits (115), Expect(2) = 5e-022
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = -3 / -1
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 395 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 216
Query: 273 LLCVGDVADGTNRGDTLGPEPLH 205
L+ G++A + + G + H
Sbjct: 215 LVSTGNMASHSQNINPFGSQLFH 147
>gb|CO165478.1|CO165478 FLD1_54_F12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_54_F12_A029 5', mRNA sequence
Length = 809
Score = 349 bits (756), Expect = 2e-095
Identities = 153/249 (61%), Positives = 177/249 (71%)
Frame = +1 / +2
Query: 73 RLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVC 252
R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI +G C
Sbjct: 2 RFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGIDVLGVAC 181
Query: 253 HVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILL 432
HVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVKA+ILL
Sbjct: 182 HVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVKATILL 361
Query: 433 IQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIA 612
+QDA+ HL + Y PE + MYGVTKTAL GLTKALA EM P+TRVN +A
Sbjct: 362 VQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVA 541
Query: 613 PGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVA 792
PGFVPT FA FL +E I+ + ERT L RLG DM YIT ET+VVA
Sbjct: 542 PGFVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVA 721
Query: 793 GGVQSRL*I 819
GG+ SRL*I
Sbjct: 722 GGMPSRL*I 748
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / +1
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 178 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 357
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 358 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 537
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 538 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 717
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 718 SWRNAIKAVDWPLGFLYL 771
Score = 110 bits (235), Expect(2) = 8e-048
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -3
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 747 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 568
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 567 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 394
Score = 100 bits (214), Expect(2) = 8e-048
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 348 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 169
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 168 RTSIPLALSFSTASPTFFCFRDETTT 91
Score = 69.3 bits (145), Expect(2) = 5e-022
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / -2
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 748 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 569
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 568 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 422
Score = 55.6 bits (115), Expect(2) = 5e-022
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = -3 / -2
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 382 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 203
Query: 273 LLCVGDVADGTNRGDTLGPEPLH 205
L+ G++A + + G + H
Sbjct: 202 LVSTGNMASHSQNINPFGSQLFH 134
>gb|CO363997.1|CO363997 RTK1_13_C03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_C03_A029 3', mRNA sequence
Length = 877
Score = 341 bits (738), Expect = 6e-093
Identities = 147/250 (58%), Positives = 176/250 (70%)
Frame = +1 / -1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R +GKVA+VTAST GIG AIAE LGLEGA+VV+SSRK+ NV EAVE +RAKGI +G
Sbjct: 838 KRFKGKVAVVTASTQGIGFAIAEHLGLEGASVVVSSRKRNNVEEAVEKIRAKGIDVLGVA 659
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS +QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+IL
Sbjct: 658 CHVSSREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATIL 479
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QDAA HL + A Y PE + MYGVTKTA+ GLTKALA EM P TRVN +
Sbjct: 478 LVQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTV 299
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APG VPT FA FL NE I+ + E+T L RLG DM YIT ET+VV
Sbjct: 298 APGLVPTHFADFLLRNEDIKNSIEEKTLLGRLGKTTDMASAVAFLASSDASYITGETLVV 119
Query: 790 AGGVQSRL*I 819
+GG+ SRL*I
Sbjct: 118 SGGMPSRL*I 89
Score = 116 bits (248), Expect = 2e-025
Identities = 63/167 (37%), Positives = 90/167 (53%)
Frame = +3 / -3
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H R+ +W+HR+S L+C S C H + R C+ * +G * QG Y
Sbjct: 659 LPCFQSRTEEGSHPKDRR*IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYS 480
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GCC S VI + F +C LQ+R +VW ++DC +H+GSC *+GT+ *
Sbjct: 479 SCPGCCCSLVTRVINYHNFISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HC 300
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV 749
S W C++T C*F +* +*E *RE+ G R+G SG+
Sbjct: 299 SSWSCTHTFC*FSS*E*RY*E*Y*RENFTW*AGENNRYGFSRCLSGI 159
Score = 96.4 bits (204), Expect(2) = 2e-041
Identities = 50/116 (43%), Positives = 57/116 (49%)
Frame = -1 / +3
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SLD PP TT VS V+Y+ P+ RK A
Sbjct: 96 SLDGIPPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAK 275
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 276 CVGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 443
Score = 94.1 bits (199), Expect(2) = 2e-041
Identities = 50/86 (58%), Positives = 52/86 (60%)
Frame = -1 / +3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 489 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 668
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LREE TT
Sbjct: 669 RTSIPLALIFSTASSTLFLLREETTT 746
>gb|DR691509.1|DR691509 EST1081596 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAD931 3' end, mRNA sequence
Length = 874
Score = 338 bits (733), Expect = 3e-092
Identities = 146/250 (58%), Positives = 175/250 (70%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R +GKVA+VTAST GIG AIAE LGLEGA+VV+ SRK+ NV EAVE +RAKGI +G
Sbjct: 41 KRFKGKVAVVTASTQGIGFAIAEHLGLEGASVVVRSRKKNNVEEAVEKMRAKGIDVLGVA 220
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS +QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+IL
Sbjct: 221 CHVSSREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATIL 400
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QDAA HL + A Y PE + MYGVTKTA+ GLTKALA EM P TRVN +
Sbjct: 401 LVQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTV 580
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APG VPT FA FL NE I+ + E+T L RLG DM YIT ET+VV
Sbjct: 581 APGLVPTHFADFLLRNEDIKNSIEEKTLLGRLGKTTDMASAVAFLASSDASYITGETLVV 760
Query: 790 AGGVQSRL*I 819
+GG+ SRL*I
Sbjct: 761 SGGMPSRL*I 790
Score = 112 bits (240), Expect = 3e-024
Identities = 62/167 (37%), Positives = 89/167 (53%)
Frame = +3 / +1
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H + R C+ * +G * QG Y
Sbjct: 220 LPCFQSRTEEGSHPKDCR*IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYS 399
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GCC S VI + F +C LQ+R +VW ++DC +H+GSC *+GT+ *
Sbjct: 400 SCPGCCCSLVTRVINYHNFISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HC 579
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV 749
S W C++T C*F +* +*E *RE+ G R+G SG+
Sbjct: 580 SSWSCTHTFC*FSS*E*RY*E*Y*RENFTW*AGENNRYGFSRCLSGI 720
Score = 96.4 bits (204), Expect(2) = 1e-040
Identities = 50/116 (43%), Positives = 57/116 (49%)
Frame = -1 / -2
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SLD PP TT VS V+Y+ P+ RK A
Sbjct: 783 SLDGIPPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAK 604
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 603 CVGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 436
Score = 91.3 bits (193), Expect(2) = 1e-040
Identities = 49/86 (56%), Positives = 51/86 (59%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 390 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 211
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LRE TT
Sbjct: 210 RTSIPLALIFSTASSTLFFLRERTTT 133
>gb|DR011905.1|DR011905 HEAT1_8_E01.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_8_E01_A029 5', mRNA sequence
Length = 742
Score = 337 bits (730), Expect = 8e-092
Identities = 146/246 (59%), Positives = 173/246 (70%)
Frame = +1 / +1
Query: 82 GKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVS 261
GKVA+VTAST GIG AIAE LGLEGA+VV+SSRK+ NV EAVE +RAKGI +G CHVS
Sbjct: 1 GKVAVVTASTQGIGFAIAEHLGLEGASVVVSSRKKNNVEEAVEKMRAKGIDVLGVACHVS 180
Query: 262 DAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQD 441
+QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+ILL+QD
Sbjct: 181 SREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATILLVQD 360
Query: 442 AAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGF 621
AA HL + A Y PE + MYGVTKTA+ GLTKALA EM P TRVN +APG
Sbjct: 361 AAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTVAPGL 540
Query: 622 VPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGV 801
VPT FA FL NE I+ + E+T L RLG DM YIT ET+VV+GG+
Sbjct: 541 VPTHFADFLLRNEDIKNSIEEKTLLGRLGKTTDMASAVAFLASSDASYITGETLVVSGGM 720
Query: 802 QSRL*I 819
SRL*I
Sbjct: 721 PSRL*I 738
Score = 112 bits (240), Expect = 3e-024
Identities = 62/167 (37%), Positives = 89/167 (53%)
Frame = +3 / +3
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H + R C+ * +G * QG Y
Sbjct: 168 LPCFQSRTEEGSHPKDCR*IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYS 347
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GCC S VI + F +C LQ+R +VW ++DC +H+GSC *+GT+ *
Sbjct: 348 SCPGCCCSLVTRVINYHNFISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HC 527
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV 749
S W C++T C*F +* +*E *RE+ G R+G SG+
Sbjct: 528 SSWSCTHTFC*FSS*E*RY*E*Y*RENFTW*AGENNRYGFSRCLSGI 668
Score = 96.4 bits (204), Expect(2) = 2e-041
Identities = 50/116 (43%), Positives = 57/116 (49%)
Frame = -1 / -3
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SLD PP TT VS V+Y+ P+ RK A
Sbjct: 731 SLDGIPPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAK 552
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 551 CVGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 384
Score = 93.6 bits (198), Expect(2) = 2e-041
Identities = 50/86 (58%), Positives = 52/86 (60%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 338 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 159
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LREE TT
Sbjct: 158 RTSIPLALIFSTASSTLFFLREETTT 81
>gb|DN462146.1|DN462146 EST957945 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIII87 5' end, mRNA sequence
Length = 749
Score = 333 bits (722), Expect = 1e-090
Identities = 145/244 (59%), Positives = 170/244 (69%)
Frame = +1 / +1
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 16 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGID 195
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 196 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 375
Query: 415 KASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDT 594
KA+ILL+QDA+ HL + Y PE + MYGVTKTAL GLTKALA EM P+T
Sbjct: 376 KATILLVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNT 555
Query: 595 RVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITA 774
RVN +APGFVPT FA FL +E I+ + ERT L RLG DM YIT
Sbjct: 556 RVNTVAPGFVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITG 735
Query: 775 ETIV 786
ET+V
Sbjct: 736 ETLV 747
Score = 122 bits (261), Expect = 4e-027
Identities = 67/173 (38%), Positives = 91/173 (52%)
Frame = +3 / +3
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 210 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 389
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 390 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 569
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIH 767
S WFC++ C*FP * +*E *RE+ G R+G C S + IH
Sbjct: 570 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIH 728
Score = 100 bits (214), Expect(2) = 2e-042
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 380 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 201
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 200 RTSIPLALSFSTASPTFFCFRDETTT 123
Score = 92.7 bits (196), Expect(2) = 2e-042
Identities = 48/108 (44%), Positives = 53/108 (49%)
Frame = -1 / -1
Query: 788 TTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLANRVGTKPGA 609
TT VS VMY+ P+ RK A VGTKPGA
Sbjct: 749 TTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKSAKFVGTKPGA 570
Query: 608 IQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 569 TVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 426
>gb|DR060310.1|DR060310 RTNIT1_27_C03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_27_C03_A029 3', mRNA sequence
Length = 802
Score = 328 bits (711), Expect = 3e-089
Identities = 144/237 (60%), Positives = 166/237 (70%)
Frame = +1 / -1
Query: 109 TMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLI 288
T GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI +G CHVS QR+ LI
Sbjct: 775 TQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGIDVLGVACHVSSRDQRRDLI 596
Query: 289 ETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGX 468
+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVKA+ILL+QDA+ HL +
Sbjct: 595 QKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVKATILLVQDASAHLSQES 416
Query: 469 XXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFL 648
Y PE + MYGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL
Sbjct: 415 SIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFL 236
Query: 649 TENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
+E I+ + ERT L RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 235 VRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 65
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / -3
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 635 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 456
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 455 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 276
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 275 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 96
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 95 SWRNAIKAVDWPLGFLYL 42
Score = 110 bits (235), Expect(2) = 8e-048
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / +3
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 66 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 245
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 246 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 419
Score = 100 bits (214), Expect(2) = 8e-048
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / +3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 465 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 644
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 645 RTSIPLALSFSTASPTFFCFRDETTT 722
Score = 69.3 bits (145), Expect(2) = 5e-022
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / +2
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 65 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 244
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 245 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 391
Score = 55.6 bits (115), Expect(2) = 5e-022
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = -3 / +2
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 431 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 610
Query: 273 LLCVGDVADGTNRGDTLGPEPLH 205
L+ G++A + + G + H
Sbjct: 611 LVSTGNMASHSQNINPFGSQLFH 679
>gb|DR094471.1|DR094471 STRR1_14_F10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_F10_A033 5', mRNA sequence
Length = 792
Score = 328 bits (711), Expect = 3e-089
Identities = 144/237 (60%), Positives = 166/237 (70%)
Frame = +1 / +3
Query: 109 TMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLI 288
T GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI +G CHVS QR+ LI
Sbjct: 6 TQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGIDVLGVACHVSSRDQRRDLI 185
Query: 289 ETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGX 468
+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVKA+ILL+QDA+ HL +
Sbjct: 186 QKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVKATILLVQDASAHLSQES 365
Query: 469 XXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFL 648
Y PE + MYGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL
Sbjct: 366 SIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFL 545
Query: 649 TENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
+E I+ + ERT L RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 546 VRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 716
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / +2
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 146 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 325
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 326 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 505
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 506 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 685
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 686 SWRNAIKAVDWPLGFLYL 739
Score = 110 bits (235), Expect(2) = 8e-048
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -3
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 715 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 536
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 535 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 362
Score = 100 bits (214), Expect(2) = 8e-048
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 316 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 137
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 136 RTSIPLALSFSTASPTFFCFRDETTT 59
Score = 69.3 bits (145), Expect(2) = 5e-022
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / -2
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 716 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 537
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 536 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 390
Score = 55.6 bits (115), Expect(2) = 5e-022
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = -3 / -2
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 350 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 171
Query: 273 LLCVGDVADGTNRGDTLGPEPLH 205
L+ G++A + + G + H
Sbjct: 170 LVSTGNMASHSQNINPFGSQLFH 102
>gb|CV032648.1|CV032648 RTNACL1_17_B07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_17_B07_A029 5', mRNA sequence
Length = 752
Score = 326 bits (706), Expect = 2e-088
Identities = 143/235 (60%), Positives = 165/235 (70%)
Frame = +1 / +3
Query: 115 GIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIET 294
GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI +G CHVS QR+ LI+
Sbjct: 6 GIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGIDVLGVACHVSSRDQRRDLIQK 185
Query: 295 AVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGXXX 474
V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVKA+ILL+QDA+ HL +
Sbjct: 186 TVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVKATILLVQDASAHLSQESSI 365
Query: 475 XXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTE 654
Y PE + MYGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL
Sbjct: 366 IIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFLVR 545
Query: 655 NETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
+E I+ + ERT L RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 546 DEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 710
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / +2
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 140 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 319
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 320 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 499
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 500 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 679
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 680 SWRNAIKAVDWPLGFLYL 733
Score = 110 bits (235), Expect(2) = 8e-048
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -2
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 709 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 530
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 529 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 356
Score = 100 bits (214), Expect(2) = 8e-048
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 310 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 131
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 130 RTSIPLALSFSTASPTFFCFRDETTT 53
Score = 69.3 bits (145), Expect(2) = 5e-022
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / -1
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 710 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 531
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 530 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 384
Score = 55.6 bits (115), Expect(2) = 5e-022
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = -3 / -1
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 344 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 165
Query: 273 LLCVGDVADGTNRGDTLGPEPLH 205
L+ G++A + + G + H
Sbjct: 164 LVSTGNMASHSQNINPFGSQLFH 96
>gb|DT627318.1|DT627318 EST1160394 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAX33 5' end, mRNA sequence
Length = 880
Score = 201 bits (434), Expect(2) = 2e-087
Identities = 87/128 (67%), Positives = 103/128 (80%)
Frame = +1 / +2
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 11 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGID 190
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 191 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 370
Query: 415 KASILLIQ 438
KA+ILL+Q
Sbjct: 371 KATILLVQ 394
Score = 142 bits (304), Expect(2) = 2e-087
Identities = 62/105 (59%), Positives = 70/105 (66%)
Frame = +1 / +3
Query: 505 PEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNE 684
PE + MYGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL +E I+ + E
Sbjct: 396 PEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFLVRDEDIKNSIEE 575
Query: 685 RTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
RT L RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 576 RTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 710
Score = 100 bits (214), Expect(2) = 1e-043
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 375 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 196
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 195 RTSIPLALSFSTASPTFFCFRDETTT 118
Score = 96.4 bits (204), Expect(2) = 1e-043
Identities = 49/106 (46%), Positives = 52/106 (49%)
Frame = -1 / -1
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 709 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 530
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL 501
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL
Sbjct: 529 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL 392
Score = 80.8 bits (170), Expect(2) = 3e-022
Identities = 43/107 (40%), Positives = 60/107 (56%)
Frame = +3 / +2
Query: 498 LQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LYSPWFCSYTVC*FPHRK*DH*ERA 677
+Q+R +VW ++DCS +H+GSC *+GT+Y * S WFC++ C*FP * +*E
Sbjct: 389 VQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YCSSWFCTHKFC*FPC*G*RY*E*Y 568
Query: 678 *REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
*RE+ G R+G C S + IH N WR A+ AV+
Sbjct: 569 *RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGGSWRNAIKAVD 709
Score = 45.1 bits (92), Expect(2) = 3e-022
Identities = 23/64 (35%), Positives = 32/64 (50%)
Frame = +3 / +1
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 205 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 384
Query: 429 SYSG 440
S G
Sbjct: 385 SCPG 396
>gb|DN465658.1|DN465658 EST961457 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJT04 5' end, mRNA sequence
Length = 727
Score = 201 bits (434), Expect(2) = 2e-087
Identities = 87/128 (67%), Positives = 103/128 (80%)
Frame = +1 / +2
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 11 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGID 190
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 191 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 370
Query: 415 KASILLIQ 438
KA+ILL+Q
Sbjct: 371 KATILLVQ 394
Score = 142 bits (304), Expect(2) = 2e-087
Identities = 62/105 (59%), Positives = 70/105 (66%)
Frame = +1 / +3
Query: 505 PEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNE 684
PE + MYGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL +E I+ + E
Sbjct: 396 PEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFLVRDEDIKNSIEE 575
Query: 685 RTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
RT L RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 576 RTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 710
Score = 100 bits (214), Expect(2) = 1e-043
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 375 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 196
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 195 RTSIPLALSFSTASPTFFCFRDETTT 118
Score = 96.4 bits (204), Expect(2) = 1e-043
Identities = 49/106 (46%), Positives = 52/106 (49%)
Frame = -1 / -1
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 709 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 530
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL 501
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL
Sbjct: 529 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL 392
Score = 80.8 bits (170), Expect(2) = 3e-022
Identities = 43/107 (40%), Positives = 60/107 (56%)
Frame = +3 / +2
Query: 498 LQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LYSPWFCSYTVC*FPHRK*DH*ERA 677
+Q+R +VW ++DCS +H+GSC *+GT+Y * S WFC++ C*FP * +*E
Sbjct: 389 VQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YCSSWFCTHKFC*FPC*G*RY*E*Y 568
Query: 678 *REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVN 818
*RE+ G R+G C S + IH N WR A+ AV+
Sbjct: 569 *RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGGSWRNAIKAVD 709
Score = 45.1 bits (92), Expect(2) = 3e-022
Identities = 23/64 (35%), Positives = 32/64 (50%)
Frame = +3 / +1
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 205 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 384
Query: 429 SYSG 440
S G
Sbjct: 385 SCPG 396
>gb|CX650832.1|CX650832 COLD1_48_H10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_48_H10_A029 3', mRNA sequence
Length = 752
Score = 311 bits (674), Expect(2) = 4e-085
Identities = 133/231 (57%), Positives = 159/231 (68%)
Frame = +1 / -1
Query: 109 TMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLI 288
T GIG AIAE LGLEGA+VV+SSRK+ NV EAVE +RAKGI +G CHVS +QR+ LI
Sbjct: 695 TQGIGFAIAEHLGLEGASVVVSSRKRNNVEEAVEKIRAKGIDVLGVACHVSSREQRRDLI 516
Query: 289 ETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGX 468
+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+ILL+QDAA HL +
Sbjct: 515 QKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATILLVQDAAAHLSQES 336
Query: 469 XXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFL 648
A Y PE + MYGVTKTA+ GLTKALA EM P TRVN +APG VPT FA FL
Sbjct: 335 SIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTVAPGLVPTHFADFL 156
Query: 649 TENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGV 801
NE I+ + E+T L RLG DM YIT ET+VV+GG+
Sbjct: 155 LRNEDIKNSIEEKTLLGRLGKTTDMASAVAFLASSDASYITGETLVVSGGM 3
Score = 112 bits (240), Expect = 3e-024
Identities = 62/167 (37%), Positives = 89/167 (53%)
Frame = +3 / -3
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H + R C+ * +G * QG Y
Sbjct: 555 LPCFQSRTEEGSHPKDCR*IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYS 376
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GCC S VI + F +C LQ+R +VW ++DC +H+GSC *+GT+ *
Sbjct: 375 SCPGCCCSLVTRVINYHNFISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HC 196
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV 749
S W C++T C*F +* +*E *RE+ G R+G SG+
Sbjct: 195 SSWSCTHTFC*FSS*E*RY*E*Y*RENFTW*AGENNRYGFSRCLSGI 55
Score = 94.1 bits (199), Expect(2) = 4e-040
Identities = 50/86 (58%), Positives = 52/86 (60%)
Frame = -1 / +1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 385 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 564
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LREE TT
Sbjct: 565 RTSIPLALIFSTASSTLFLLREETTT 642
Score = 91.8 bits (194), Expect(2) = 4e-040
Identities = 47/111 (42%), Positives = 54/111 (48%)
Frame = -1 / +1
Query: 797 PPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLANRVGTK 618
PP TT VS V+Y+ P+ RK A VGT+
Sbjct: 7 PPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAKCVGTR 186
Query: 617 PGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 187 PGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 339
Score = 24.4 bits (47), Expect(2) = 4e-085
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1 / -2
Query: 70 RRLEGKVAIVTAS 108
+R +GKVA+VTAS
Sbjct: 733 KRFKGKVAVVTAS 695
>gb|DR071417.1|DR071417 RTDK1_19_E11.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_E11_A029 5', mRNA sequence
Length = 701
Score = 308 bits (666), Expect = 5e-083
Identities = 131/213 (61%), Positives = 157/213 (73%)
Frame = +1 / +2
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R +GKVA+VTAST GIG AIAE LGLEGA+VV+SSRK+ NV EAVE +RAKGI +G
Sbjct: 62 KRFKGKVAVVTASTQGIGFAIAEHLGLEGASVVVSSRKRNNVEEAVEKIRAKGIDVLGVA 241
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS +QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+IL
Sbjct: 242 CHVSSREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATIL 421
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QDAA HL + A Y PE + MYGVTKTA+ GLTKALA EM P TRVN +
Sbjct: 422 LVQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTV 601
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLG 708
APG VPT FA FL NE I+ + E+T L RLG
Sbjct: 602 APGLVPTHFADFLLRNEDIKNSIEEKTLLGRLG 700
Score = 109 bits (233), Expect = 3e-023
Identities = 57/147 (38%), Positives = 82/147 (55%)
Frame = +3 / +1
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H + R C+ * +G * QG Y
Sbjct: 241 LPCFQSRTEEGSHPKDCR*IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYS 420
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GCC S VI + F +C LQ+R +VW ++DC +H+GSC *+GT+ *
Sbjct: 421 SCPGCCCSLVTRVINYHNFISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HC 600
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*RED 689
S W C++T C*F +* +*E *RE+
Sbjct: 601 SSWSCTHTFC*FSS*E*RY*E*Y*REN 681
Score = 94.1 bits (199), Expect(2) = 2e-036
Identities = 50/86 (58%), Positives = 52/86 (60%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 411 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 232
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LREE TT
Sbjct: 231 RTSIPLALIFSTASSTLFLLREETTT 154
Score = 79.0 bits (166), Expect(2) = 2e-036
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -1 / -3
Query: 647 RKLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITD 468
RK A VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I D
Sbjct: 639 RKSAKCVGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIID 460
Query: 467 D 465
D
Sbjct: 459 D 457
>gb|BX248871.1|BX248871 BX248871 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP002A12, mRNA sequence
Length = 702
Score = 301 bits (651), Expect = 6e-081
Identities = 130/209 (62%), Positives = 154/209 (73%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R +GKVA+VTAST GIG AIAE LGLEGA+VV+SSRK+ NV EAVE LRAKGI +G
Sbjct: 76 QRFKGKVAVVTASTQGIGFAIAEHLGLEGASVVVSSRKKNNVEEAVEKLRAKGIDVLGVA 255
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS +QR+ LI+ V +G IDILVSNAAANP+V+ I+ + E VLDKLW+INVKA+IL
Sbjct: 256 CHVSSREQRRDLIQKTVDKYGRIDILVSNAAANPTVEPIVLVPEPVLDKLWEINVKATIL 435
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QDAA HL + A Y PE + MYGVTKTAL GLT+ALA EM P TRVN +
Sbjct: 436 LVQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTALLGLTEALAAEMAPKTRVNTV 615
Query: 610 APGFVPTRFASFLTENETIRKELNERTKL 696
APGFVPT A FL NE I+ + ERT L
Sbjct: 616 APGFVPTHXADFLLRNEDIKNSIEERTLL 702
Score = 116 bits (247), Expect = 3e-025
Identities = 59/147 (40%), Positives = 82/147 (55%)
Frame = +3 / +3
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G * QG Y
Sbjct: 255 LPCFQSRTEEGSHPKDCR*IWSHRHSGLKCSC*SNCGAHCFGSRACT**TLGD*CQGHYS 434
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GCC S VI + F +C LQ+R +VW ++DCS +H GSC *+GT+ *
Sbjct: 435 SCPGCCCSLVTRVIDYHNFISCCLQTRGINGDVWGYQDCSFRAHRGSCC*NGTKNKG*HC 614
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*RED 689
S W C++T C*FP +* +*E *RE+
Sbjct: 615 SSWICTHTXC*FPS*E*GY*E*Y*REN 695
Score = 102 bits (217), Expect(2) = 2e-038
Identities = 53/86 (61%), Positives = 55/86 (63%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 425 ALTLISQSLSSTGSGTKTMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLCSRLETWQATP 246
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS T F LREE TT
Sbjct: 245 RTSIPLALSFSTASSTLFFLREETTT 168
Score = 78.0 bits (164), Expect(2) = 2e-038
Identities = 39/61 (63%), Positives = 41/61 (67%)
Frame = -1 / -2
Query: 647 RKLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITD 468
RK A VGT PGA LT V G IS ARA V PKRAV VTPYI SGL* A +EI+I D
Sbjct: 653 RKSAXCVGTNPGATVLTLVFGAISAARASVSPKRAVLVTPYIAIDASGL*AATDEIMIID 474
Query: 467 D 465
D
Sbjct: 473 D 471
>gb|CO172567.1|CO172567 NDL1_30_B07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_30_B07_A029 5', mRNA sequence
Length = 676
Score = 297 bits (644), Expect = 6e-080
Identities = 127/224 (56%), Positives = 153/224 (68%)
Frame = +1 / +2
Query: 127 AIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLIETAVKS 306
AIAE LGLEGA+VV+ SRK+ NV EAVE +RAKGI +G CHVS +Q++ LI+ V
Sbjct: 5 AIAEHLGLEGASVVVCSRKKNNVEEAVEKMRAKGIDVLGVACHVSSREQKRDLIQKTVDK 184
Query: 307 FGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGXXXXXXX 486
+GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+ILL+QDAA HL +
Sbjct: 185 YGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATILLVQDAAAHLSQESSIIIIS 364
Query: 487 XXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETI 666
A Y PE + MYGVTKTA+ GLTKALA EM P TRVN +APG VPT FA FL NE I
Sbjct: 365 SVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTVAPGLVPTHFADFLLRNEDI 544
Query: 667 RKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGG 798
+ + E+T L RLG DM YIT ET+VV+GG
Sbjct: 545 KNSIEEKTLLGRLGKTTDMASAVAFLASSDASYITGETLVVSGG 676
Score = 112 bits (240), Expect = 3e-024
Identities = 62/167 (37%), Positives = 89/167 (53%)
Frame = +3 / +1
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H + R C+ * +G * QG Y
Sbjct: 127 LPCFQSRTEEGSHPKDCR*IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYS 306
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GCC S VI + F +C LQ+R +VW ++DC +H+GSC *+GT+ *
Sbjct: 307 SCPGCCCSLVTRVINYHNFISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HC 486
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV 749
S W C++T C*F +* +*E *RE+ G R+G SG+
Sbjct: 487 SSWSCTHTFC*FSS*E*RY*E*Y*RENFTW*AGENNRYGFSRCLSGI 627
Score = 91.8 bits (194), Expect(2) = 2e-039
Identities = 49/86 (56%), Positives = 52/86 (60%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 297 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLFCSRLETWQATP 118
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LRE+ TT
Sbjct: 117 RTSIPLALIFSTASSTLFFLREQTTT 40
Score = 91.8 bits (194), Expect(2) = 2e-039
Identities = 47/111 (42%), Positives = 54/111 (48%)
Frame = -1 / -2
Query: 797 PPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLANRVGTK 618
PP TT VS V+Y+ P+ RK A VGT+
Sbjct: 675 PPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAKCVGTR 496
Query: 617 PGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 495 PGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 343
>gb|DR689840.1|DR689840 EST1079926 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACO06 3' end, mRNA sequence
Length = 841
Score = 293 bits (635), Expect = 1e-078
Identities = 125/208 (60%), Positives = 151/208 (72%)
Frame = +1 / +2
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAE LGLEGA+VV+ SRK+ NV EAVE +RAKGI
Sbjct: 218 MESTGKRFKGKVAVVTASTQGIGFAIAEHLGLEGASVVVCSRKKNNVEEAVEKMRAKGID 397
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS +QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INV
Sbjct: 398 VLGVACHVSSREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINV 577
Query: 415 KASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDT 594
KA+ILL+QDAA HL + A Y PE + MYGVTKTA+ GLTKALA EM P T
Sbjct: 578 KATILLVQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKT 757
Query: 595 RVNCIAPGFVPTRFASFLTENETIRKEL 678
RVN +APG VPT FA FL NE I+ +
Sbjct: 758 RVNTVAPGLVPTHFADFLLRNEDIKNSI 841
Score = 106 bits (226), Expect = 3e-022
Identities = 53/141 (37%), Positives = 78/141 (55%)
Frame = +3 / +1
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H + R C+ * +G * QG Y
Sbjct: 412 LPCFQSRTEEGSHPKDCR*IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYS 591
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GCC S V+ + F +C LQ+R +VW ++DC +H+GSC *+GT+ *
Sbjct: 592 SCPGCCCSLVTRVVNYHNFISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HC 771
Query: 609 SPWFCSYTVC*FPHRK*DH*E 671
S W C++T C*F +* +*E
Sbjct: 772 SSWSCTHTFC*FSS*E*RY*E 834
Score = 92.3 bits (195), Expect(2) = 8e-036
Identities = 49/86 (56%), Positives = 52/86 (60%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 582 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 403
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LRE+ TT
Sbjct: 402 RTSIPLALIFSTASSTLFFLREQTTT 325
Score = 79.0 bits (166), Expect(2) = 8e-036
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -1 / -2
Query: 647 RKLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITD 468
RK A VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I D
Sbjct: 810 RKSAKCVGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIID 631
Query: 467 D 465
D
Sbjct: 630 D 628
>gb|DR692028.1|DR692028 EST1082115 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADH12 3' end, mRNA sequence
Length = 776
Score = 288 bits (623), Expect = 5e-077
Identities = 124/209 (59%), Positives = 150/209 (71%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
+R +GKVA+VTAST GIG AIAE LGLEGA+VV+ SRK+ NV EAVE +RAKGI +G
Sbjct: 133 KRFKGKVAVVTASTQGIGFAIAEHLGLEGASVVVCSRKKNNVEEAVEKMRAKGIDVLGVA 312
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS +QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+IL
Sbjct: 313 CHVSSREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATIL 492
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QDAA HL + A Y PE + MYGVTKTA+ GLTKALA EM P TRVN +
Sbjct: 493 LVQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTV 672
Query: 610 APGFVPTRFASFLTENETIRKELNERTKL 696
APG VPT FA FL + +R L + L
Sbjct: 673 APGLVPTHFADFLLRMKILRIVLKRKLYL 759
Score = 105 bits (225), Expect = 4e-022
Identities = 51/132 (38%), Positives = 73/132 (55%)
Frame = +3 / +3
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H + R C+ * +G * QG Y
Sbjct: 312 LPCFQSRTEEGSHPKDCR*IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYS 491
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GCC S VI + F +C LQ+R +VW ++DC +H+GSC *+GT+ *
Sbjct: 492 SCPGCCCSLVTRVINYHNFISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HC 671
Query: 609 SPWFCSYTVC*F 644
S W C++T C*F
Sbjct: 672 SSWSCTHTFC*F 707
Score = 92.3 bits (195), Expect(2) = 8e-036
Identities = 49/86 (56%), Positives = 52/86 (60%)
Frame = -1 / -1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 482 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 303
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LRE+ TT
Sbjct: 302 RTSIPLALIFSTASSTLFFLREQTTT 225
Score = 79.0 bits (166), Expect(2) = 8e-036
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -1 / -1
Query: 647 RKLANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITD 468
RK A VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I D
Sbjct: 710 RKSAKCVGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIID 531
Query: 467 D 465
D
Sbjct: 530 D 528
>gb|DR180318.1|DR180318 RTMNUT1_27_G07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_27_G07_A029 5', mRNA sequence
Length = 705
Score = 167 bits (359), Expect(2) = 5e-076
Identities = 71/108 (65%), Positives = 86/108 (79%)
Frame = +1 / +2
Query: 109 TMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQRKSLI 288
T GIG AIAE LGLEGA+VV+SSRK+ NV EAVE +RAKGI +G CHVS +QR+ LI
Sbjct: 29 TQGIGFAIAEHLGLEGASVVVSSRKKNNVEEAVEKMRAKGIDVLGVACHVSSREQRRDLI 208
Query: 289 ETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILL 432
+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+ILL
Sbjct: 209 QKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATILL 352
Score = 138 bits (296), Expect(2) = 5e-076
Identities = 59/126 (46%), Positives = 70/126 (55%)
Frame = +1 / +2
Query: 412 VKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPD 591
+ ++ DAA HL + A Y PE + MYGVTKTA+ GLTKALA EM P
Sbjct: 326 INVKATILLDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPK 505
Query: 592 TRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYIT 771
TRVN +APG VPT FA FL NE I+ + E+T L RLG DM YIT
Sbjct: 506 TRVNTVAPGLVPTHFADFLLRNEDIKNSIEEKTLLGRLGKTTDMASAVAFLASSDASYIT 685
Query: 772 AETIVV 789
ET+VV
Sbjct: 686 GETLVV 703
Score = 93.6 bits (198), Expect(2) = 2e-038
Identities = 50/86 (58%), Positives = 52/86 (60%)
Frame = -1 / -1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 339 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 160
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LREE TT
Sbjct: 159 RTSIPLALIFSTASSTLFFLREETTT 82
Score = 86.3 bits (182), Expect(2) = 2e-038
Identities = 45/108 (41%), Positives = 52/108 (48%)
Frame = -1 / -1
Query: 788 TTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLANRVGTKPGA 609
TT VS V+Y+ P+ RK A VGT+PGA
Sbjct: 702 TTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAKCVGTRPGA 523
Query: 608 IQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 522 TVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 379
>gb|DR013096.1|DR013096 HEAT1_17_A09.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_17_A09_A029 3', mRNA sequence
Length = 897
Score = 264 bits (571), Expect = 7e-070
Identities = 115/204 (56%), Positives = 136/204 (66%)
Frame = +1 / +3
Query: 208 EGLRAKGITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESV 387
E LRAKG+ +G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E V
Sbjct: 18 EKLRAKGMMFLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPV 197
Query: 388 LDKLWDINVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKA 567
LDKLW+INVKA+ILL+QDA+ HL + Y PE + MYGVTKTAL GLTKA
Sbjct: 198 LDKLWEINVKATILLVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKA 377
Query: 568 LAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXX 747
LA EM P+TRVN +APGFVPT FA FL +E I+ + ERT L RLG DM
Sbjct: 378 LAAEMAPNTRVNTVAPGFVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLA 557
Query: 748 XXXXXYITAETIVVAGGVQSRL*I 819
YIT ET+VVAGG+ SRL*I
Sbjct: 558 SSDASYITGETLVVAGGMPSRL*I 629
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / +2
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 59 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 238
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 239 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 418
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 419 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 598
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 599 SWRNAIKAVDWPLGFLYL 652
Score = 110 bits (235), Expect(2) = 1e-040
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -3
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 628 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 449
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 448 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 275
Score = 76.7 bits (161), Expect(2) = 1e-040
Identities = 40/69 (57%), Positives = 43/69 (62%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 229 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 50
Query: 239 TAVIPLALS 213
+IPLALS
Sbjct: 49 RNIIPLALS 23
Score = 69.3 bits (145), Expect(2) = 1e-021
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / -2
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 629 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 450
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 449 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 303
Score = 54.2 bits (112), Expect(2) = 1e-021
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = -3 / -2
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 263 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 84
Query: 273 LLCVGDVADGTNRGDTLGPE 214
L+ G++A + + G +
Sbjct: 83 LVSTGNMASHSQKHHPFGSQ 24
>gb|DR060394.1|DR060394 RTNIT1_27_C03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_27_C03_A029 5', mRNA sequence
Length = 870
Score = 257 bits (555), Expect = 1e-067
Identities = 111/198 (56%), Positives = 131/198 (66%)
Frame = +1 / -2
Query: 226 GITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWD 405
GI +G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+
Sbjct: 869 GIDVLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWE 690
Query: 406 INVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMG 585
INVKA+ILL+QDA+ HL + Y PE + MYGVTKTAL GLTKALA EM
Sbjct: 689 INVKATILLVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMA 510
Query: 586 PDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXY 765
P+TRVN +APGFVPT FA FL +E I+ + ERT L RLG DM Y
Sbjct: 509 PNTRVNTVAPGFVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASY 330
Query: 766 ITAETIVVAGGVQSRL*I 819
IT ET+VVAGG+ SRL*I
Sbjct: 329 ITGETLVVAGGMPSRL*I 276
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / -1
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 846 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 667
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 666 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 487
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 486 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 307
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 306 SWRNAIKAVDWPLGFLYL 253
Score = 110 bits (235), Expect(2) = 6e-038
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / +1
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 277 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 456
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 457 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 630
Score = 69.3 bits (145), Expect(2) = 4e-021
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / +3
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 276 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 455
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 456 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 602
Score = 68.0 bits (142), Expect(2) = 6e-038
Identities = 36/65 (55%), Positives = 38/65 (58%)
Frame = -1 / +1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 676 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 855
Query: 239 TAVIP 225
IP
Sbjct: 856 RTSIP 870
Score = 52.4 bits (108), Expect(2) = 4e-021
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = -3 / +3
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 642 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 821
Query: 273 LLCVGDVA 250
L+ G++A
Sbjct: 822 LVSTGNMA 845
>gb|DR052017.1|DR052017 RTCA1_1_H06.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_1_H06_A029 5', mRNA sequence
Length = 897
Score = 249 bits (539), Expect = 2e-065
Identities = 108/190 (56%), Positives = 127/190 (66%)
Frame = +1 / -3
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVKA+IL
Sbjct: 892 CHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVKATIL 713
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCI 609
L+QDA+ HL + Y PE + MYGVTKTAL GLTKALA EM P+TRVN +
Sbjct: 712 LVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTV 533
Query: 610 APGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVV 789
APGFVPT FA FL +E I+ + ERT L RLG DM YIT ET+VV
Sbjct: 532 APGFVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVV 353
Query: 790 AGGVQSRL*I 819
AGG+ SRL*I
Sbjct: 352 AGGMPSRL*I 323
Score = 133 bits (285), Expect = 2e-030
Identities = 75/198 (37%), Positives = 103/198 (52%)
Frame = +3 / -2
Query: 249 LPRLRRTAAQEPHRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYP 428
LP + + H + +W+HR+S L+C S C H R C+ * +G *RQG Y
Sbjct: 893 LPCFQSRPEERSHPKDCR*IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYS 714
Query: 429 SYSGCCSSPTEGVICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LY 608
S GC S VI + F N LQ+R +VW ++DCS +H+GSC *+GT+Y *
Sbjct: 713 SCPGCFCSLVTRVINYHNFVNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YC 534
Query: 609 SPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCC 788
S WFC++ C*FP * +*E *RE+ G R+G C S + IH N
Sbjct: 533 SSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGG 354
Query: 789 CWRGAV*AVNLAEVYIYL 842
WR A+ AV+ ++YL
Sbjct: 353 SWRNAIKAVDWPLGFLYL 300
Score = 110 bits (235), Expect(2) = 6e-036
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / +3
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 324 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 503
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 504 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 677
Score = 69.3 bits (145), Expect(2) = 4e-021
Identities = 43/109 (39%), Positives = 55/109 (50%)
Frame = -3 / +2
Query: 819 DLQPRLHPSSNNNGFSRNV*CVVRRQKSRSRSHVFHSTQSLKLGPLVKLFPNGLIFCEET 640
+LQP H SS + FS V* + K S SH+ +Q K L N I +E
Sbjct: 323 NLQP*WHSSSYHQCFSSYV*SITGC*KGNS*SHIGCFSQPTK*SSLFNTILNIFIPNKEI 502
Query: 639 SKPCRNKTRGYTVNTSIGSHLTSKSLRETKESSLCDTIHCQSLFWIVTS 493
SK C KTR Y++N I H +SKSL E +SSL + IH W V+S
Sbjct: 503 SKICGYKTRSYSINPCIWCHFSSKSLCEP*KSSLGNPIHGHHCLWPVSS 649
Score = 61.1 bits (127), Expect(2) = 6e-036
Identities = 33/57 (57%), Positives = 35/57 (61%)
Frame = -1 / +3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQ 249
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ
Sbjct: 723 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQ 893
Score = 52.4 bits (108), Expect(2) = 4e-021
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = -3 / +2
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SIL+KK+ LDVN+P+ I+ RL++ ++ I I D+N+Y + LDE
Sbjct: 689 VSRSILDKKNSGLDVNLPKFIKYRLWNRNNGVHSWISSCI*DQNVYATIFIYSLLDEISP 868
Query: 273 LLCVGDVA 250
L+ G++A
Sbjct: 869 LVSTGNMA 892
>gb|CO364078.1|CO364078 RTK1_13_C03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_C03_A029 5', mRNA sequence
Length = 856
Score = 243 bits (526), Expect = 1e-063
Identities = 105/189 (55%), Positives = 126/189 (66%)
Frame = +1 / -1
Query: 253 HVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILL 432
HVS +QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+ILL
Sbjct: 856 HVSSREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATILL 677
Query: 433 IQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIA 612
+QDAA HL + A Y PE + MYGVTKTA+ GLTKALA EM P TRVN +A
Sbjct: 676 VQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTVA 497
Query: 613 PGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVA 792
PG VPT FA FL NE I+ + E+T L RLG DM YIT ET+VV+
Sbjct: 496 PGLVPTHFADFLLRNEDIKNSIEEKTLLGRLGKTTDMASAVAFLASSDASYITGETLVVS 317
Query: 793 GGVQSRL*I 819
GG+ SRL*I
Sbjct: 316 GGMPSRL*I 290
Score = 114 bits (243), Expect = 1e-024
Identities = 61/155 (39%), Positives = 86/155 (55%)
Frame = +3 / -3
Query: 285 HRDGRQELWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCSSPTEG 464
H R+ +W+HR+S L+C S C H + R C+ * +G * QG Y S GCC S
Sbjct: 824 HPKDRR*IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYSSCPGCCCSLVTR 645
Query: 465 VICDYYFFNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LYSPWFCSYTVC*F 644
VI + F +C LQ+R +VW ++DC +H+GSC *+GT+ * S W C++T C*F
Sbjct: 644 VINYHNFISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HCSSWSCTHTFC*F 465
Query: 645 PHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFSGV 749
+* +*E *RE+ G R+G SG+
Sbjct: 464 SS*E*RY*E*Y*RENFTW*AGENNRYGFSRCLSGI 360
Score = 96.4 bits (204), Expect(2) = 9e-030
Identities = 50/116 (43%), Positives = 57/116 (49%)
Frame = -1 / +3
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SLD PP TT VS V+Y+ P+ RK A
Sbjct: 297 SLDGIPPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAK 476
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 477 CVGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 644
Score = 54.7 bits (113), Expect(2) = 9e-030
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = -3 / +2
Query: 453 VRSSILNKKDRSLDVNIPQLIENRLFHFKYAIYRRICGSIGDKNIYVPKALDGRLDEALA 274
V SSIL+KK+ LD+N+P I+ RL++ ++ I I D+N+YV + G LDE
Sbjct: 656 VSSSILDKKNSGLDINLPNFIKYRLWN*NNGLHSWISSCI*DQNVYVTIFIYGLLDEIPP 835
Query: 273 LLCVGDV 253
L G++
Sbjct: 836 LFSTGNM 856
>gb|DR071340.1|DR071340 RTDK1_19_E11.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_E11_A029 3', mRNA sequence
Length = 861
Score = 241 bits (520), Expect = 7e-063
Identities = 104/189 (55%), Positives = 125/189 (66%)
Frame = +1 / +3
Query: 253 HVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILL 432
HVS +QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+ILL
Sbjct: 3 HVSSREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATILL 182
Query: 433 IQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIA 612
+QDAA HL + A Y PE + MYGVTKTA+ GLTKALA EM P TRVN +A
Sbjct: 183 VQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTVA 362
Query: 613 PGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVA 792
PG VPT FA FL NE I+ + E+T L RLG DM YIT ET+VV+
Sbjct: 363 PGLVPTHFADFLLRNEDIKNSIEEKTLLGRLGKTTDMASAVAFLASSDASYITGETLVVS 542
Query: 793 GGVQSRL*I 819
GG+ S L*I
Sbjct: 543 GGMPSSL*I 569
Score = 111 bits (237), Expect = 8e-024
Identities = 59/148 (39%), Positives = 83/148 (56%)
Frame = +3 / +2
Query: 306 LWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCSSPTEGVICDYYF 485
+W+HR+S L+C S C H + R C+ * +G * QG Y S GCC S VI + F
Sbjct: 56 IWSHRHSGLKCSC*SNCEAHCFSSRACT**NLGD*CQGHYSSCPGCCCSLVTRVINYHNF 235
Query: 486 FNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LYSPWFCSYTVC*FPHRK*DH 665
+C LQ+R +VW ++DC +H+GSC *+GT+ * S W C++T C*F +* +
Sbjct: 236 ISCCLQTRGINGHVWGYQDCHFRAHKGSCC*NGTKNKG*HCSSWSCTHTFC*FSS*E*RY 415
Query: 666 *ERA*REDQA*EIGYCGRHGCGCGFSGV 749
*E *RE+ G R+G SG+
Sbjct: 416 *E*Y*RENFTW*AGENNRYGFSRCLSGI 499
Score = 94.5 bits (200), Expect(2) = 3e-030
Identities = 49/115 (42%), Positives = 56/115 (48%)
Frame = -1 / -3
Query: 809 LDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLANR 630
LD PP TT VS V+Y+ P+ RK A
Sbjct: 559 LDGIPPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAKC 380
Query: 629 VGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 379 VGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 215
Score = 57.9 bits (120), Expect(2) = 3e-030
Identities = 31/56 (55%), Positives = 33/56 (58%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETW 252
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETW
Sbjct: 169 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETW 2
>gb|DT635813.1|DT635813 EST1150744 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGK86 3' end, mRNA sequence
Length = 752
Score = 240 bits (518), Expect = 1e-062
Identities = 103/172 (59%), Positives = 126/172 (73%)
Frame = +1 / +1
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAE LGLEGA+VV+ SRK+ NV EAVE +RAKGI
Sbjct: 226 MESTGKRFKGKVAVVTASTQGIGFAIAEHLGLEGASVVVCSRKKNNVEEAVEKMRAKGID 405
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS +QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INV
Sbjct: 406 VLGVACHVSSREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINV 585
Query: 415 KASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKAL 570
KA+ILL+QDAA HL + A Y PE + MYGVTKTA+ GLTK L
Sbjct: 586 KATILLVQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKLL 741
Score = 92.3 bits (195), Expect(2) = 3e-026
Identities = 49/86 (56%), Positives = 52/86 (60%)
Frame = -1 / -1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 590 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 411
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LRE+ TT
Sbjct: 410 RTSIPLALIFSTASSTLFFLREQTTT 333
Score = 46.9 bits (96), Expect(2) = 3e-026
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -1 / -1
Query: 572 ARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
+++FV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 743 SKSFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 636
>gb|DR744925.1|DR744925 RTCU1_25_G07.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_25_G07_A029 5', mRNA sequence
Length = 532
Score = 158 bits (339), Expect(2) = 6e-062
Identities = 67/115 (58%), Positives = 80/115 (69%)
Frame = +1 / +2
Query: 238 VGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVK 417
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVK
Sbjct: 185 LGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVK 364
Query: 418 ASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEM 582
A+ILL+QDA+ HL + Y PE + MYGVTKTAL GLTKALA EM
Sbjct: 365 ATILLVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEM 529
Score = 100 bits (213), Expect(2) = 6e-062
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +1 / +1
Query: 70 RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGI 231
+R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 19 KRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGI 180
Score = 64.3 bits (134), Expect(3) = 1e-027
Identities = 34/60 (56%), Positives = 36/60 (60%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 366 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 187
Score = 56.5 bits (117), Expect(3) = 1e-027
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -1 / -2
Query: 581 ISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 528 ISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 412
Score = 40.9 bits (83), Expect(3) = 1e-027
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1 / -3
Query: 230 IPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 179 IPLALSFSTASPTFFCFRDETTT 111
>gb|DR683029.1|DR683029 EST1073105 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAD88 3' end, mRNA sequence
Length = 774
Score = 198 bits (427), Expect(2) = 8e-062
Identities = 87/134 (64%), Positives = 104/134 (77%)
Frame = +1 / +1
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGL GA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 31 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGL*GASVVVSSRKQKNVGEAVEKLRAKGID 210
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 211 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 390
Query: 415 KASILLIQDAAPHL 456
KA+ILL+Q A +
Sbjct: 391 KATILLVQALAAEM 432
Score = 110 bits (235), Expect = 2e-023
Identities = 49/99 (49%), Positives = 60/99 (60%)
Frame = +1 / +1
Query: 523 MYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKR 702
++ + A L +ALA EM P+TRVN +APGFVPT FA FL +E I+ + ERT L R
Sbjct: 373 LWEINVKATILLVQALAAEMAPNTRVNTVAPGFVPTNFADFLVRDEDIKNSIEERTLLGR 552
Query: 703 LGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
LG DM YIT ET+VVAGG+ SRL*I
Sbjct: 553 LGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 669
Score = 100 bits (214), Expect(2) = 1e-034
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 395 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 216
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 215 RTSIPLALSFSTASPTFFCFRDETTT 138
Score = 68.9 bits (144), Expect(2) = 1e-034
Identities = 36/88 (40%), Positives = 39/88 (44%)
Frame = -1 / -2
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 668 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 489
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVR 555
A VGTKPGA LT V G IS ARA+ R
Sbjct: 488 AKFVGTKPGATVLTLVFGAISAARAWTR 405
Score = 59.7 bits (124), Expect(2) = 8e-062
Identities = 36/93 (38%), Positives = 48/93 (51%)
Frame = +3 / +3
Query: 564 GSCW*DGTRYSC*LYSPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFS 743
GSC +GT+Y * S WFC++ C*FP * +*E *RE+ G R+G C S
Sbjct: 414 GSCCRNGTKYKG*YCSSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLS 593
Query: 744 GV*RRIIHYG*NHCCCWRGAV*AVNLAEVYIYL 842
+ IH N WR A+ AV+ ++YL
Sbjct: 594 SIQ*CFIHNWRNTGGSWRNAIKAVDWPLGFLYL 692
>gb|CV144691.1|CV144691 EST855900 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPID895 5' end, mRNA sequence
Length = 599
Score = 237 bits (511), Expect = 1e-061
Identities = 103/165 (62%), Positives = 122/165 (73%)
Frame = +1 / +2
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 104 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGID 283
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 284 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 463
Query: 415 KASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTAL 549
KA+ILL+QDA+ HL + Y PE + MYGVTKTAL
Sbjct: 464 KATILLVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTAL 598
Score = 100 bits (214), Expect(2) = 4e-026
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 468 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 289
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 288 RTSIPLALSFSTASPTFFCFRDETTT 211
Score = 37.7 bits (76), Expect(2) = 4e-026
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -1 / -3
Query: 548 RAVFVTPYIVNPCSGL*PAIEEIIITDD 465
RAV VTPY+ SGL* I+EI+I DD
Sbjct: 597 RAVLVTPYMAIIASGL*AVIDEIMIIDD 514
>gb|DT631306.1|DT631306 EST1146237 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF733 3' end, mRNA sequence
Length = 850
Score = 198 bits (427), Expect(2) = 8e-061
Identities = 87/134 (64%), Positives = 104/134 (77%)
Frame = +1 / +3
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGL GA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 39 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGL*GASVVVSSRKQKNVGEAVEKLRAKGID 218
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 219 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 398
Query: 415 KASILLIQDAAPHL 456
KA+ILL+Q A +
Sbjct: 399 KATILLVQALAAEM 440
Score = 110 bits (235), Expect = 2e-023
Identities = 49/99 (49%), Positives = 60/99 (60%)
Frame = +1 / +3
Query: 523 MYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKR 702
++ + A L +ALA EM P+TRVN +APGFVPT FA FL +E I+ + ERT L R
Sbjct: 381 LWEINVKATILLVQALAAEMAPNTRVNTVAPGFVPTNFADFLVRDEDIKNSIEERTLLGR 560
Query: 703 LGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
LG DM YIT ET+VVAGG+ SRL*I
Sbjct: 561 LGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 677
Score = 100 bits (214), Expect(2) = 2e-034
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = -1 / -1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 403 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 224
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 223 RTSIPLALSFSTASPTFFCFRDETTT 146
Score = 68.9 bits (144), Expect(2) = 2e-034
Identities = 36/88 (40%), Positives = 39/88 (44%)
Frame = -1 / -1
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 676 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 497
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVR 555
A VGTKPGA LT V G IS ARA+ R
Sbjct: 496 AKFVGTKPGATVLTLVFGAISAARAWTR 413
Score = 56.5 bits (117), Expect(2) = 8e-061
Identities = 34/85 (40%), Positives = 44/85 (51%)
Frame = +3 / +2
Query: 564 GSCW*DGTRYSC*LYSPWFCSYTVC*FPHRK*DH*ERA*REDQA*EIGYCGRHGCGCGFS 743
GSC +GT+Y * S WFC++ C*FP * +*E *RE+ G R+G C S
Sbjct: 422 GSCCRNGTKYKG*YCSSWFCTHKFC*FPC*G*RY*E*Y*RENFTW*AGKNNRYGFSCCLS 601
Query: 744 GV*RRIIHYG*NHCCCWRGAV*AVN 818
+ IH N WR A+ AV+
Sbjct: 602 SIQ*CFIHNWRNTGGSWRNAIKAVD 676
>gb|CO163657.1|CO163657 FLD1_43_A09.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_43_A09_A029 3', mRNA sequence
Length = 828
Score = 229 bits (495), Expect = 2e-059
Identities = 100/177 (56%), Positives = 118/177 (66%)
Frame = +1 / +3
Query: 289 ETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGX 468
+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVKA+ILL+QDA+ HL +
Sbjct: 3 QKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVKATILLVQDASAHLSQES 182
Query: 469 XXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFL 648
Y PE + MYGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL
Sbjct: 183 SIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFL 362
Query: 649 TENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
+E I+ + ERT L RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 363 VRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 533
Score = 131 bits (281), Expect = 7e-030
Identities = 72/179 (40%), Positives = 97/179 (54%)
Frame = +3 / +2
Query: 306 LWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCSSPTEGVICDYYF 485
+W+HR+S L+C S C H R C+ * +G *RQG Y S GC S VI + F
Sbjct: 20 IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYSSCPGCFCSLVTRVINYHNF 199
Query: 486 FNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LYSPWFCSYTVC*FPHRK*DH 665
N LQ+R +VW ++DCS +H+GSC *+GT+Y * S WFC++ C*FP * +
Sbjct: 200 VNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YCSSWFCTHKFC*FPC*G*RY 379
Query: 666 *ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVNLAEVYIYL 842
*E *RE+ G R+G C S + IH N WR A+ AV+ ++YL
Sbjct: 380 *E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGGSWRNAIKAVDWPLGFLYL 556
Score = 110 bits (235), Expect(2) = 2e-032
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -3
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 532 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 353
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 352 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 179
Score = 49.2 bits (101), Expect(2) = 2e-032
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLT 297
ALTLIS SLS T S +M ST G AAA ETR+SM P L T
Sbjct: 133 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLST 11
>gb|DR022767.1|DR022767 STRS1_53_G12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_53_G12_A034 3', mRNA sequence
Length = 791
Score = 229 bits (495), Expect = 2e-059
Identities = 100/177 (56%), Positives = 118/177 (66%)
Frame = +1 / +3
Query: 289 ETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGX 468
+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVKA+ILL+QDA+ HL +
Sbjct: 3 QKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVKATILLVQDASAHLSQES 182
Query: 469 XXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFL 648
Y PE + MYGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL
Sbjct: 183 SIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFL 362
Query: 649 TENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
+E I+ + ERT L RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 363 VRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 533
Score = 131 bits (281), Expect = 7e-030
Identities = 72/179 (40%), Positives = 97/179 (54%)
Frame = +3 / +2
Query: 306 LWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCSSPTEGVICDYYF 485
+W+HR+S L+C S C H R C+ * +G *RQG Y S GC S VI + F
Sbjct: 20 IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYSSCPGCFCSLVTRVINYHNF 199
Query: 486 FNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LYSPWFCSYTVC*FPHRK*DH 665
N LQ+R +VW ++DCS +H+GSC *+GT+Y * S WFC++ C*FP * +
Sbjct: 200 VNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YCSSWFCTHKFC*FPC*G*RY 379
Query: 666 *ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVNLAEVYIYL 842
*E *RE+ G R+G C S + IH N WR A+ AV+ ++YL
Sbjct: 380 *E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGGSWRNAIKAVDWPLGFLYL 556
Score = 110 bits (235), Expect(2) = 2e-032
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -2
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 532 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 353
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 352 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 179
Score = 49.2 bits (101), Expect(2) = 2e-032
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLT 297
ALTLIS SLS T S +M ST G AAA ETR+SM P L T
Sbjct: 133 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLST 11
>gb|DR094390.1|DR094390 STRR1_14_F10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_F10_A033 3', mRNA sequence
Length = 832
Score = 229 bits (494), Expect = 3e-059
Identities = 100/174 (57%), Positives = 117/174 (67%)
Frame = +1 / +1
Query: 298 VKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPHLRKGXXXX 477
V +G IDILVSNAAANP+VD I+ + E VLDKLW+INVKA+ILL+QDA+ HL +
Sbjct: 7 VDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINVKATILLVQDASAHLSQESSII 186
Query: 478 XXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTEN 657
Y PE + MYGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL +
Sbjct: 187 IISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFLVRD 366
Query: 658 ETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
E I+ + ERT L RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 367 EDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 528
Score = 131 bits (281), Expect = 7e-030
Identities = 72/179 (40%), Positives = 97/179 (54%)
Frame = +3 / +3
Query: 306 LWAHRYSCLQCCRKSFCR*HT*NERVCSR*AVGY*RQGFYPSYSGCCSSPTEGVICDYYF 485
+W+HR+S L+C S C H R C+ * +G *RQG Y S GC S VI + F
Sbjct: 15 IWSHRHSGLKCSC*SNCGPHCFGSRACT**TLGD*RQGHYSSCPGCFCSLVTRVINYHNF 194
Query: 486 FNCWLQSRTRIDNVWCHKDCSLWSHEGSCW*DGTRYSC*LYSPWFCSYTVC*FPHRK*DH 665
N LQ+R +VW ++DCS +H+GSC *+GT+Y * S WFC++ C*FP * +
Sbjct: 195 VNYCLQARGNDGHVWGYQDCSFRAHKGSCC*NGTKYKG*YCSSWFCTHKFC*FPC*G*RY 374
Query: 666 *ERA*REDQA*EIGYCGRHGCGCGFSGV*RRIIHYG*NHCCCWRGAV*AVNLAEVYIYL 842
*E *RE+ G R+G C S + IH N WR A+ AV+ ++YL
Sbjct: 375 *E*Y*RENFTW*AGKNNRYGFSCCLSSIQ*CFIHNWRNTGGSWRNAIKAVDWPLGFLYL 551
Score = 110 bits (235), Expect(2) = 2e-032
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -3
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 527 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 348
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 347 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 174
Score = 49.2 bits (101), Expect(2) = 2e-032
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLT 297
ALTLIS SLS T S +M ST G AAA ETR+SM P L T
Sbjct: 128 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLST 6
>gb|BX252904.1|BX252904 BX252904 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP074F20, mRNA sequence
Length = 460
Score = 222 bits (479), Expect = 3e-057
Identities = 97/152 (63%), Positives = 113/152 (74%)
Frame = +1 / +3
Query: 94 IVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCHVSDAQQ 273
+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI +G CHVS Q
Sbjct: 3 VVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVEEAVERLRAKGIDVLGVACHVSSRDQ 182
Query: 274 RKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLIQDAAPH 453
R+ LI+ V G IDILVSNAAANP++D I+ + E VLDKLW+INVKA+ILL+QDA+ H
Sbjct: 183 RRDLIQKTVDKHGRIDILVSNAAANPTLDPIVSVPEPVLDKLWEINVKATILLVQDASAH 362
Query: 454 LRKGXXXXXXXXXAGYNPEQGLTMYGVTKTAL 549
L + A Y PE + MYGVTKTAL
Sbjct: 363 LSQESSIIIISSIAAYRPEAMMAMYGVTKTAL 458
Score = 99.1 bits (210), Expect(2) = 9e-027
Identities = 51/86 (59%), Positives = 54/86 (62%)
Frame = -1 / -1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M S G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 328 ALTLISQSLSSTGSGTETMGSKVGLAAAFETRMSMRPCLSTVFWMRSLLWSRLETWQATP 149
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS TFFC R+E TT
Sbjct: 148 RTSIPLALSLSTASSTFFCFRDETTT 71
Score = 41.8 bits (85), Expect(2) = 9e-027
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -1 / -1
Query: 551 KRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
KRAV VTPY+ SGL* AI+EI+I DD
Sbjct: 460 KRAVLVTPYMAIIASGL*AAIDEIMIIDD 374
>gb|BG317773.1|BG317773 NXPV_005_E08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_005_E08 5' similar to Arabidopsis
thaliana sequence At4g05530 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 505
Score = 218 bits (470), Expect = 6e-056
Identities = 97/165 (58%), Positives = 115/165 (69%)
Frame = +1 / +3
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 6 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGID 185
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLDKLW+INV
Sbjct: 186 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLDKLWEINV 365
Query: 415 KASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTAL 549
K +ILL+QDA+ HL + Y M G KTAL
Sbjct: 366 KXTILLVQDASAHLSQESSIIIISSITAYXXXXMXXMXGXXKTAL 500
>gb|DR180238.1|DR180238 RTMNUT1_27_G07.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_27_G07_A029 3', mRNA sequence
Length = 874
Score = 152 bits (327), Expect(2) = 1e-054
Identities = 66/136 (48%), Positives = 79/136 (58%)
Frame = +1 / +2
Query: 412 VKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPD 591
+ ++ DAA HL + A Y PE + MYGVTKTA+ GLTKALA EM P
Sbjct: 134 INVKATILLDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKALAAEMAPK 313
Query: 592 TRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYIT 771
TRVN +APG VPT FA FL NE I+ + E+T L RLG DM YIT
Sbjct: 314 TRVNTVAPGLVPTHFADFLLRNEDIKNSIEEKTLLGRLGKTTDMASAVAFLASSDASYIT 493
Query: 772 AETIVVAGGVQSRL*I 819
ET+VV+GG+ SRL*I
Sbjct: 494 GETLVVSGGMPSRL*I 541
Score = 96.4 bits (204), Expect(2) = 2e-027
Identities = 50/116 (43%), Positives = 57/116 (49%)
Frame = -1 / -2
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SLD PP TT VS V+Y+ P+ RK A
Sbjct: 534 SLDGIPPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAK 355
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 354 CVGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 187
Score = 81.7 bits (172), Expect(2) = 1e-054
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +1 / +2
Query: 274 RKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILL 432
R+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+ILL
Sbjct: 2 RRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATILL 160
Score = 46.9 bits (96), Expect(2) = 2e-027
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = -1 / -2
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLL 276
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L
Sbjct: 147 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSL 4
>gb|DR102633.1|DR102633 STRR1_82_D05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_82_D05_A033 5', mRNA sequence
Length = 465
Score = 210 bits (454), Expect = 9e-054
Identities = 90/154 (58%), Positives = 111/154 (72%)
Frame = +1 / +2
Query: 73 RLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVC 252
R +GKVA+V A T GIG AIAE LGLEGA+VV+ SRK+ NV EAVE +RAKGI +G C
Sbjct: 2 RFKGKVAVVFAFTQGIGFAIAEHLGLEGASVVVCSRKKNNVEEAVEKMRAKGIDVLGVAC 181
Query: 253 HVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILL 432
HVS +QR+ LI+ V +GHIDILVSNAAANP+V I+ + E VLDK+W+INVKA+ILL
Sbjct: 182 HVSSREQRRDLIQKTVDKYGHIDILVSNAAANPTVKPIVLVPEPVLDKIWEINVKATILL 361
Query: 433 IQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGV 534
+QDAA HL + A Y P+ + MYGV
Sbjct: 362 VQDAAAHLSQESSIIIISSVAAYRPKASMAMYGV 463
Score = 92.3 bits (195), Expect(2) = 4e-021
Identities = 49/86 (56%), Positives = 52/86 (60%)
Frame = -1 / -1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS LS T S +M T G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 348 ALTLISQILSSTGSGTKTMGFTVGLAAAFETRMSM*PYLSTVFWMRSLLCSRLETWQATP 169
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLAL STAS T F LRE+ TT
Sbjct: 168 RTSIPLALIFSTASSTLFFLREQTTT 91
Score = 29.5 bits (58), Expect(2) = 4e-021
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1 / -1
Query: 536 VTPYIVNPCSGL*PAIEEIIITDD 465
VTPY+ GL* A +EI+I DD
Sbjct: 465 VTPYMAIDAFGL*AATDEIMIIDD 394
>gb|DR013166.1|DR013166 HEAT1_17_A09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_17_A09_A029 5', mRNA sequence
Length = 540
Score = 207 bits (447), Expect = 9e-053
Identities = 90/134 (67%), Positives = 107/134 (79%)
Frame = +1 / +1
Query: 55 MDVKCRRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGIT 234
M+ +R +GKVA+VTAST GIG AIAERLGLEGA+VV+SSRKQKNV EAVE LRAKGI
Sbjct: 109 MEGTSKRFKGKVAVVTASTQGIGFAIAERLGLEGASVVVSSRKQKNVGEAVEKLRAKGID 288
Query: 235 AVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINV 414
+G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + VLDKLW+INV
Sbjct: 289 VLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVP*PVLDKLWEINV 468
Query: 415 KASILLIQDAAPHL 456
KA+ILL+QDA+ HL
Sbjct: 469 KATILLVQDASAHL 510
>gb|BX681596.1|BX681596 BX681596 RS Pinus pinaster cDNA clone RS61G05, mRNA sequence
Length = 497
Score = 201 bits (433), Expect = 7e-051
Identities = 86/127 (67%), Positives = 104/127 (81%)
Frame = +1 / +2
Query: 76 LEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAVCH 255
++GKVA+VTAST GIG AIAE LGLEGA+VV+SSRK+ NV EAVE LRAKGI +G CH
Sbjct: 80 IKGKVAVVTASTQGIGFAIAEHLGLEGASVVVSSRKKNNVEEAVEKLRAKGIDVLGVACH 259
Query: 256 VSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASILLI 435
VS +QR+ LI+ V +G IDILVSNAAANP+V+ I+ + E VLDKLW+INVKA+ILL+
Sbjct: 260 VSSREQRRDLIQKTVDKYGRIDILVSNAAANPTVEPIVLVPEPVLDKLWEINVKATILLV 439
Query: 436 QDAAPHL 456
QDAA HL
Sbjct: 440 QDAAAHL 460
Score = 102 bits (217), Expect = 5e-021
Identities = 53/86 (61%), Positives = 55/86 (63%)
Frame = -1 / -3
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L C ETWQ P
Sbjct: 423 ALTLISQSLSSTGSGTKTMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLCSRLETWQATP 244
Query: 239 TAVIPLALSPSTASFTFFCLREEMTT 162
IPLALS STAS T F LREE TT
Sbjct: 243 RTSIPLALSFSTASSTLFFLREETTT 166
>gb|DR013810.1|DR013810 HEAT1_21_E01.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_21_E01_A029 5', mRNA sequence
Length = 856
Score = 185 bits (398), Expect = 5e-046
Identities = 79/144 (54%), Positives = 93/144 (64%)
Frame = +1 / -2
Query: 388 LDKLWDINVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKA 567
LDK+W+INVKA+ILL+QDAA HL + A Y PE + MYGVTKTA+ GLTKA
Sbjct: 855 LDKIWEINVKATILLVQDAAAHLSQESSIIIISSVAAYRPEASMAMYGVTKTAILGLTKA 676
Query: 568 LAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXX 747
LA EM P TRVN +APG VPT FA FL NE I+ + E+T L RLG DM
Sbjct: 675 LAAEMAPKTRVNTVAPGLVPTHFADFLLRNEDIKNSIEEKTLLGRLGKTTDMASAVAFLA 496
Query: 748 XXXXXYITAETIVVAGGVQSRL*I 819
YIT ET+VV+GG+ SRL*I
Sbjct: 495 SSDASYITGETLVVSGGMPSRL*I 424
Score = 96.4 bits (204), Expect(2) = 5e-023
Identities = 50/116 (43%), Positives = 57/116 (49%)
Frame = -1 / +2
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SLD PP TT VS V+Y+ P+ RK A
Sbjct: 431 SLDGIPPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVFSSILFLISSFLRRKSAK 610
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
VGT+PGA LT V G IS ARAFV PK AV VTPY+ SGL* A +EI+I DD
Sbjct: 611 CVGTRPGATVLTLVFGAISAARAFVSPKMAVLVTPYMAIDASGL*AATDEIMIIDD 778
Score = 31.8 bits (63), Expect(2) = 5e-023
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -3 / +1
Query: 453 VRSSILNKKDRSLDVNIPQLIE 388
V SSIL+KK+ LD+N+P I+
Sbjct: 790 VSSSILDKKNSGLDINLPNFIK 855
>gb|BE810234.1|BE810234 NXCI_061_H01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_061_H01 5' similar to Arabidopsis
thaliana sequence At4g05530 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 376
Score = 167 bits (360), Expect = 9e-041
Identities = 72/123 (58%), Positives = 85/123 (69%)
Frame = +1 / +3
Query: 214 LRAKGITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLD 393
LRAKGI +G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLD
Sbjct: 6 LRAKGIDVLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLD 185
Query: 394 KLWDINVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALA 573
KLW+INVKA+ILL+QDA+ HL + Y P + MYGVTKTAL GLTKALA
Sbjct: 186 KLWEINVKATILLVQDASAHLSQESSIIIISSITAYRPXXMMAMYGVTKTALLGLTKALA 365
Query: 574 GEM 582
EM
Sbjct: 366 AEM 374
Score = 75.3 bits (158), Expect(2) = 3e-023
Identities = 40/69 (57%), Positives = 42/69 (60%)
Frame = -1 / -1
Query: 419 ALTLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAP 240
ALTLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 211 ALTLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATP 32
Query: 239 TAVIPLALS 213
IPLALS
Sbjct: 31 RTSIPLALS 5
Score = 53.8 bits (111), Expect(2) = 3e-023
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = -1 / -1
Query: 581 ISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
IS ARAFV PKRAV VTPY+ GL* I+EI+I DD
Sbjct: 373 ISAARAFVSPKRAVLVTPYMAIIXXGL*AVIDEIMIIDD 257
>gb|BF186012.1|BF186012 NXCI_132_B02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_132_B02 5' similar to Arabidopsis
thaliana sequence At4g05530 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 385
Score = 155 bits (334), Expect = 3e-037
Identities = 67/126 (53%), Positives = 81/126 (64%)
Frame = +1 / +3
Query: 214 LRAKGITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLD 393
LRAKGI +G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLD
Sbjct: 6 LRAKGIDVLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLD 185
Query: 394 KLWDINVKASILLIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALA 573
KLW+INV +ILL+QDA+ HL + Y PE + MYGVTKTAL LT LA
Sbjct: 186 KLWEINVXXTILLVQDASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALXXLTXXLA 365
Query: 574 GEMGPD 591
P+
Sbjct: 366 AXXAPN 383
Score = 71.6 bits (150), Expect(2) = 6e-021
Identities = 38/67 (56%), Positives = 40/67 (59%)
Frame = -1 / -1
Query: 413 TLISHSLSRTDSFISSMLSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAPTA 234
TLIS SLS T S +M ST G AAA ETR+SM P L T MR L ETWQ P
Sbjct: 205 TLISQSLSSTGSGTETMGSTVGLAAAFETRMSMRPYLSTVFWMRSLLWSRLETWQATPRT 26
Query: 233 VIPLALS 213
IPLALS
Sbjct: 25 SIPLALS 5
Score = 49.6 bits (102), Expect(2) = 6e-021
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = -1 / -1
Query: 593 VSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
V G AR FV KRAV VTPY+ SGL* I+EI+I DD
Sbjct: 385 VFGAXXAARXFVXXKRAVLVTPYMAIIASGL*AVIDEIMIIDD 257
>gb|CX648043.1|CX648043 COLD1_26_E02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_26_E02_A029 3', mRNA sequence
Length = 853
Score = 152 bits (326), Expect = 4e-036
Identities = 67/127 (52%), Positives = 77/127 (60%)
Frame = +1 / +3
Query: 439 DAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPG 618
DA+ HL + Y PE + MYGVTKTAL GLTKALA EM P+TRVN +APG
Sbjct: 3 DASAHLSQESSIIIISSITAYRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPG 182
Query: 619 FVPTRFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGG 798
FVPT FA FL +E I+ + ERT L RLG DM YIT ET+VVAGG
Sbjct: 183 FVPTNFADFLVRDEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGG 362
Query: 799 VQSRL*I 819
+ SRL*I
Sbjct: 363 MPSRL*I 383
Score = 110 bits (235), Expect = 2e-023
Identities = 56/118 (47%), Positives = 61/118 (51%)
Frame = -1 / -1
Query: 818 IYSLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKL 639
IYSLD PPATT VS VMY+ P+ RK
Sbjct: 382 IYSLDGIPPATTSVSPVMYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSSLTRKS 203
Query: 638 ANRVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
A VGTKPGA LT V G IS ARAFV PKRAV VTPY+ SGL* I+EI+I DD
Sbjct: 202 AKFVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYMAIIASGL*AVIDEIMIIDD 29
>gb|BX680985.1|BX680985 BX680985 RS Pinus pinaster cDNA clone RS51F09, mRNA sequence
Length = 561
Score = 150 bits (322), Expect = 2e-035
Identities = 66/123 (53%), Positives = 74/123 (60%)
Frame = +1 / +3
Query: 451 HLRKGXXXXXXXXXAGYNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPT 630
HL + A Y PE + MYGVTKTAL GLTKALA EM P TRVN +APGFVPT
Sbjct: 6 HLSQESSIIIISSVAAYRPEASMAMYGVTKTALLGLTKALAAEMAPKTRVNTVAPGFVPT 185
Query: 631 RFASFLTENETIRKELNERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSR 810
FA FL NE I+ + ERT L RLG DM YIT ET+VV+GG+ SR
Sbjct: 186 HFADFLLRNEDIKNSIEERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVSGGMPSR 365
Query: 811 L*I 819
L*I
Sbjct: 366 L*I 374
Score = 101 bits (216), Expect = 6e-021
Identities = 53/116 (45%), Positives = 58/116 (50%)
Frame = -1 / -3
Query: 812 SLDCTPPATTMVSAVMYDXXXXXXXXXXXXXXSTVPNXXXXXXXXXXXXXXXXXVRKLAN 633
SLD PP TT VS V+Y+ P+ RK A
Sbjct: 367 SLDGIPPDTTSVSPVIYEASLDARKATAEAISVVFPSLPSKVLSSILFLISSFLRRKSAK 188
Query: 632 RVGTKPGAIQLTRVSGPISPARAFVRPKRAVFVTPYIVNPCSGL*PAIEEIIITDD 465
VGTKPGA LT V G IS ARAFV PKRAV VTPYI SGL* A +EI+I DD
Sbjct: 187 CVGTKPGATVLTLVFGAISAARAFVSPKRAVLVTPYIAIDASGL*AATDEIMIIDD 20
>gb|DR744848.1|DR744848 RTCU1_25_G07.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_25_G07_A029 3', mRNA sequence
Length = 623
Score = 145 bits (311), Expect = 5e-034
Identities = 63/107 (58%), Positives = 71/107 (66%)
Frame = +1 / +3
Query: 499 YNPEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKEL 678
Y PE + MYGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL +E I+ +
Sbjct: 3 YRPEAMMAMYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFLVRDEDIKNSI 182
Query: 679 NERTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
ERT L RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 183 EERTLLGRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 323
>gb|CX650915.1|CX650915 COLD1_48_H10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_48_H10_A029 5', mRNA sequence
Length = 635
Score = 138 bits (295), Expect = 8e-032
Identities = 59/105 (56%), Positives = 68/105 (64%)
Frame = +1 / -3
Query: 505 PEQGLTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNE 684
PE + MYGVTKTA+ GLTKALA EM P TRVN +APG VPT FA FL NE I+ + E
Sbjct: 630 PEASMAMYGVTKTAILGLTKALAAEMAPKTRVNTVAPGLVPTHFADFLLRNEDIKNSIEE 451
Query: 685 RTKLKRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
+T L RLG DM YIT ET+VV+GG+ SRL*I
Sbjct: 450 KTLLGRLGKTTDMASAVAFLASSDASYITGETLVVSGGMPSRL*I 316
>gb|DR097420.1|DR097420 STRR1_34_C04.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_34_C04_A033 5', mRNA sequence
Length = 854
Score = 136 bits (292), Expect = 2e-031
Identities = 60/101 (59%), Positives = 67/101 (66%)
Frame = +1 / +2
Query: 517 LTMYGVTKTALFGLTKALAGEMGPDTRVNCIAPGFVPTRFASFLTENETIRKELNERTKL 696
L YGVTKTAL GLTKALA EM P+TRVN +APGFVPT FA FL +E I+ + ERT L
Sbjct: 452 LCQYGVTKTALLGLTKALAAEMAPNTRVNTVAPGFVPTNFADFLVRDEDIKNSIEERTLL 631
Query: 697 KRLGTVEDMXXXXXXXXXXXXXYITAETIVVAGGVQSRL*I 819
RLG DM YIT ET+VVAGG+ SRL*I
Sbjct: 632 GRLGKTTDMASAVAFLASSDASYITGETLVVAGGMPSRL*I 754
>gb|BF221218.1|BF221218 NXCI_156_B05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_156_B05 5' similar to Arabidopsis
thaliana sequence At4g05530 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 293
Score = 126 bits (269), Expect = 3e-028
Identities = 52/81 (64%), Positives = 63/81 (77%)
Frame = +1 / +3
Query: 214 LRAKGITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLD 393
LRAKGI +G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLD
Sbjct: 6 LRAKGIDVLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLD 185
Query: 394 KLWDINVKASILLIQDAAPHL 456
KLW+INVKA+ILL+QDA+ HL
Sbjct: 186 KLWEINVKATILLVQDASAHL 248
>gb|BF220797.1|BF220797 NXCI_151_H04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_151_H04 5' similar to Arabidopsis
thaliana sequence At4g05530 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 300
Score = 125 bits (268), Expect = 4e-028
Identities = 54/98 (55%), Positives = 65/98 (66%)
Frame = +1 / +3
Query: 214 LRAKGITAVGAVCHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLD 393
LRAKGI +G CHVS QR+ LI+ V +G IDILVSNAAANP+VD I+ + E VLD
Sbjct: 6 LRAKGIDVLGVACHVSSRDQRRDLIQKTVDKYGRIDILVSNAAANPTVDPIVSVPEPVLD 185
Query: 394 KLWDINVKASILLIQDAAPHLRKGXXXXXXXXXAGYNP 507
KLW+INVK +ILL+QDA HL + Y P
Sbjct: 186 KLWEINVKXTILLVQDAXXHLSQEXSIIIISSITAYXP 299
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 415,662,176
Number of Sequences: 355925
Number of extensions: 5483649
Number of successful extensions: 39794
Number of sequences better than 1.0e-020: 64
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 14836596440
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)