TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3064721.2.2
         (595 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CF396558.1|CF396558  RTDS2_22_C09.g1_A021 Drought-stresse...   203   8e-052
gb|AW289781.1|AW289781  NXNV006B06F Nsf Xylem Normal wood Ve...   201   4e-051
gb|CD028366.1|CD028366  NXNV006B06 Nsf Xylem Normal wood Ver...   201   4e-051
gb|CX713265.1|CX713265  RTPQ1_8_B07.b1_A032 Roots treated wi...   190   8e-048
gb|DR014696.1|DR014696  HEAT1_51_C03.b1_A029 Root at 37 C fo...   190   8e-048
gb|DR109571.1|DR109571  RTS1_3_E05.b1_A029 Roots minus sulfu...   190   8e-048
gb|DR169090.1|DR169090  RTPHOS1_30_A06.b1_A029 Roots minus p...   190   8e-048
gb|DR689244.1|DR689244  EST1079330 Normalized pine embryo li...   190   8e-048
gb|DT635347.1|DT635347  EST1150278 Normalized pine embryo li...   190   8e-048
gb|DR686620.1|DR686620  EST1076698 Normalized pine embryo li...   181   5e-045
gb|CO364079.1|CO364079  RTK1_13_C05.g1_A029 Roots minus pota...   176   1e-043
gb|BX249940.1|BX249940  BX249940 Pinus pinaster differenciat...   172   1e-042
gb|DR078574.1|DR078574  RTFEPL1_5_C09.g1_A029 Roots plus add...   168   3e-041
gb|BI202957.1|BI202957  NXPV_093_C03_F NXPV (Nsf Xylem Plani...   166   1e-040
gb|DR112556.1|DR112556  RTS1_29_B07.b1_A029 Roots minus sulf...   158   3e-038
gb|AI812705.1|AI812705  18B3 Pine Lambda Zap Xylem library P...   129   6e-035
gb|DR015777.1|DR015777  STRS1_5_C07.g1_A034 Shoot tip pitch ...   143   1e-033
gb|DR015694.1|DR015694  STRS1_5_C07.b1_A034 Shoot tip pitch ...   142   2e-033
gb|DR744023.1|DR744023  RTCU1_19_F03.g1_A029 Roots plus adde...   135   6e-033
gb|DT633664.1|DT633664  EST1148595 Normalized pine embryo li...   100   2e-029
gb|BX250554.1|BX250554  BX250554 Pinus pinaster differenciat...   123   8e-028
gb|CX651405.1|CX651405  COLD1_52_D12.b1_A029 Root cold Pinus...   123   1e-027
gb|BG319249.1|BG319249  NXPV_019_E12_F NXPV (Nsf Xylem Plani...   122   3e-027
gb|DR060177.1|DR060177  RTNIT1_26_E10.b1_A029 Roots minus ni...   117   7e-026
gb|BQ107024.1|BQ107024  NXLV085_F11_F NXLV (Nsf Xylem Late w...   111   6e-024
gb|BX252912.1|BX252912  BX252912 Pinus pinaster differenciat...   105   2e-022
>gb|CF396558.1|CF396558 RTDS2_22_C09.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
           taeda cDNA clone RTDS2_22_C09_A021 5', mRNA sequence
          Length = 797

 Score =  203 bits (438), Expect = 8e-052
 Identities = 70/113 (61%), Positives = 93/113 (82%)
 Frame = +3 / -3

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N+FDL +W+KQ+IT +YH WQ +NE+R+LWKLGTLP GL+TF+  T PLD+SWH LGLGY
Sbjct: 735 NVFDLKEWKKQDITGIYHKWQNMNEDRVLWKLGTLPPGLITFYGLTHPLDKSWHVLGLGY 556

                                                                
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
           NP+V+  +I  AAV+HYNGN+KPWLE+ + KYR YW+ ++ YD  FL++CNIN
Sbjct: 555 NPSVDRLEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYIKYDHPFLQQCNIN 397
>gb|AW289781.1|AW289781 NXNV006B06F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
           NXNV006B06 5', mRNA sequence
          Length = 465

 Score =  201 bits (433), Expect = 4e-051
 Identities = 73/113 (64%), Positives = 90/113 (79%)
 Frame = +3 / +2

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N+FDL +WRKQ IT +YH WQ LN++R LWKLGTLP GL+TF++ TF LD+SWH LGLGY
Sbjct: 116 NIFDLEEWRKQGITGIYHQWQNLNKDRQLWKLGTLPPGLITFYHLTFVLDKSWHVLGLGY 295

                                                                
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
           NPNV+  +I RAAVIHYNGN+KPWL+I +PKYR YW+ +V YD      CNI+
Sbjct: 296 NPNVDSTEIERAAVIHYNGNMKPWLDIAIPKYRHYWTKYVKYDXXXXXLCNIS 454

 Score =  110 bits (234), Expect = 1e-023
 Identities = 56/112 (50%), Positives = 65/112 (58%)
 Frame = -1 / -1

                                                                       
Query: 337 MLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN*CH 158
           +LHS    *S  T   Q   Y G  ISS GF  PL* +TAA  IS+  T GL P P  C 
Sbjct: 450 ILHSXXXX*SYFTYLVQ*CLYLGMAISSHGFILPL*CITAALSISVESTLGL*PRPRTCQ 271

                                                               
Query: 157 ERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
           + S+ NVR  KV  P GRVP+FHN L  F FC  W*  V+ CFL S +SN+F
Sbjct: 270 DLSKTNVR**KVISPGGRVPNFHNCLSLFRFCH*W*IPVIPCFLHSSRSNIF 115
>gb|CD028366.1|CD028366 NXNV006B06 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
           NXNV006B06 5' similar to Arabidopsis thaliana sequence
           At3g61130 unknown protein see
           http://mips.gsf.de/proj/thal/db/index.html, mRNA
           sequence
          Length = 465

 Score =  201 bits (433), Expect = 4e-051
 Identities = 73/113 (64%), Positives = 90/113 (79%)
 Frame = +3 / +2

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N+FDL +WRKQ IT +YH WQ LN++R LWKLGTLP GL+TF++ TF LD+SWH LGLGY
Sbjct: 116 NIFDLEEWRKQGITGIYHQWQNLNKDRQLWKLGTLPPGLITFYHLTFVLDKSWHVLGLGY 295

                                                                
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
           NPNV+  +I RAAVIHYNGN+KPWL+I +PKYR YW+ +V YD      CNI+
Sbjct: 296 NPNVDSTEIERAAVIHYNGNMKPWLDIAIPKYRHYWTKYVKYDXXXXXLCNIS 454

 Score =  110 bits (234), Expect = 1e-023
 Identities = 56/112 (50%), Positives = 65/112 (58%)
 Frame = -1 / -1

                                                                       
Query: 337 MLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN*CH 158
           +LHS    *S  T   Q   Y G  ISS GF  PL* +TAA  IS+  T GL P P  C 
Sbjct: 450 ILHSXXXX*SYFTYLVQ*CLYLGMAISSHGFILPL*CITAALSISVESTLGL*PRPRTCQ 271

                                                               
Query: 157 ERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
           + S+ NVR  KV  P GRVP+FHN L  F FC  W*  V+ CFL S +SN+F
Sbjct: 270 DLSKTNVR**KVISPGGRVPNFHNCLSLFRFCH*W*IPVIPCFLHSSRSNIF 115
>gb|CX713265.1|CX713265 RTPQ1_8_B07.b1_A032 Roots treated with paraquat Pinus taeda cDNA
           clone RTPQ1_8_B07_A032 3', mRNA sequence
          Length = 702

 Score =  190 bits (409), Expect = 8e-048
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3 / +2

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N F L  WR++  TE YH WQ LNENR LWKLGTLP GL+T++  T PLD+SWH LGLGY
Sbjct: 83  NFFHLDAWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 262

                                                                       
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TANSG 362
           NP++++ +IR AAV+H+NGN+KPWL+IG+ +YR  W+ +V+YD  F++ CN   *   S 
Sbjct: 263 NPSISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMCNFGH*KKISR 442

             
Query: 363 AW 368
            W
Sbjct: 443 IW 448
>gb|DR014696.1|DR014696 HEAT1_51_C03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
           HEAT1_51_C03_A029 3', mRNA sequence
          Length = 914

 Score =  190 bits (409), Expect = 8e-048
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3 / +2

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N F L  WR++  TE YH WQ LNENR LWKLGTLP GL+T++  T PLD+SWH LGLGY
Sbjct: 161 NFFHLDAWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 340

                                                                       
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TANSG 362
           NP++++ +IR AAV+H+NGN+KPWL+IG+ +YR  W+ +V+YD  F++ CN   *   S 
Sbjct: 341 NPSISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMCNFGH*KKISR 520

             
Query: 363 AW 368
            W
Sbjct: 521 IW 526
>gb|DR109571.1|DR109571 RTS1_3_E05.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
           RTS1_3_E05_A029 3', mRNA sequence
          Length = 820

 Score =  190 bits (409), Expect = 8e-048
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3 / +3

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N F L  WR++  TE YH WQ LNENR LWKLGTLP GL+T++  T PLD+SWH LGLGY
Sbjct: 297 NFFHLDAWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 476

                                                                       
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TANSG 362
           NP++++ +IR AAV+H+NGN+KPWL+IG+ +YR  W+ +V+YD  F++ CN   *   S 
Sbjct: 477 NPSISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMCNFGH*KKISR 656

             
Query: 363 AW 368
            W
Sbjct: 657 IW 662
>gb|DR169090.1|DR169090 RTPHOS1_30_A06.b1_A029 Roots minus phosphorous Pinus taeda cDNA
           clone RTPHOS1_30_A06_A029 3', mRNA sequence
          Length = 710

 Score =  190 bits (409), Expect = 8e-048
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3 / +3

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N F L  WR++  TE YH WQ LNENR LWKLGTLP GL+T++  T PLD+SWH LGLGY
Sbjct: 108 NFFHLDAWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 287

                                                                       
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TANSG 362
           NP++++ +IR AAV+H+NGN+KPWL+IG+ +YR  W+ +V+YD  F++ CN   *   S 
Sbjct: 288 NPSISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMCNFGH*KKISR 467

             
Query: 363 AW 368
            W
Sbjct: 468 IW 473
>gb|DR689244.1|DR689244 EST1079330 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PWACF91 3' end, mRNA sequence
          Length = 854

 Score =  190 bits (409), Expect = 8e-048
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3 / +2

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N F L  WR++  TE YH WQ LNENR LWKLGTLP GL+T++  T PLD+SWH LGLGY
Sbjct: 281 NFFHLDAWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 460

                                                                       
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TANSG 362
           NP++++ +IR AAV+H+NGN+KPWL+IG+ +YR  W+ +V+YD  F++ CN   *   S 
Sbjct: 461 NPSISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMCNFGH*KKISR 640

             
Query: 363 AW 368
            W
Sbjct: 641 IW 646
>gb|DT635347.1|DT635347 EST1150278 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PIMGF84 3' end, mRNA sequence
          Length = 768

 Score =  190 bits (409), Expect = 8e-048
 Identities = 68/122 (55%), Positives = 90/122 (73%)
 Frame = +3 / +1

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N F L  WR++  TE YH WQ LNENR LWKLGTLP GL+T++  T PLD+SWH LGLGY
Sbjct: 289 NFFHLDAWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 468

                                                                       
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TANSG 362
           NP++++ +IR AAV+H+NGN+KPWL+IG+ +YR  W+ +V+YD  F++ CN   *   S 
Sbjct: 469 NPSISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDYDMEFVQMCNFGH*KKISR 648

             
Query: 363 AW 368
            W
Sbjct: 649 IW 654
>gb|DR686620.1|DR686620 EST1076698 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PWABI03 3' end, mRNA sequence
          Length = 866

 Score =  181 bits (389), Expect = 5e-045
 Identities = 62/100 (62%), Positives = 83/100 (83%)
 Frame = +3 / +2

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N+FDL +W+KQ+IT +YH WQ +NE+R+LWKLGTLP GL+TF+  T PLD+SWH LGLGY
Sbjct: 563 NVFDLKEWKKQDITGIYHKWQNMNEDRVLWKLGTLPPGLITFYGLTHPLDKSWHVLGLGY 742

                                                   
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHV 302
           NP+V+  +I  AAV+HYNGN+KPWLE+ + KYR YW+ ++
Sbjct: 743 NPSVDRLEIDNAAVVHYNGNMKPWLELAMTKYRPYWTKYI 862
>gb|CO364079.1|CO364079 RTK1_13_C05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
           RTK1_13_C05_A029 5', mRNA sequence
          Length = 912

 Score =  176 bits (379), Expect = 1e-043
 Identities = 63/113 (55%), Positives = 86/113 (76%)
 Frame = +3 / -1

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N+FDL  W+K N+T  YH WQ+ N +R LWKLGTLP GL+TF+  T PLDR WH LGLGY
Sbjct: 522 NVFDLVAWKKLNVTSRYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHILGLGY 343

                                                                
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
           +PNV+++ I   AV+HYNGN+KPWL++ + +Y+ +W  +VNY   FL++CNI+
Sbjct: 342 DPNVDMQLIESGAVLHYNGNMKPWLKLAMNRYKSFWEKYVNYLHPFLQKCNIH 184
>gb|BX249940.1|BX249940 BX249940 Pinus pinaster differenciating xylem adult Pinus pinaster
           cDNA clone PP030E08, mRNA sequence
          Length = 629

 Score =  172 bits (371), Expect = 1e-042
 Identities = 61/106 (57%), Positives = 81/106 (76%)
 Frame = +3 / -1

                                                                       
Query: 51  YHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIH 230
           YH WQ LNENR LWKLGTLP GL+T++  T PLD+SWH LGLGYNP++++ +IR AAV+H
Sbjct: 629 YHYWQNLNENRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGYNPSISMDEIRNAAVVH 450

                                                         
Query: 231 YNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TANSGAW 368
           +NGN+KPWL+IG+ +YR  W+ +V+YD  F++ CN   *   S  W
Sbjct: 449 FNGNMKPWLDIGMNQYRDTWTKYVDYDMEFIQMCNFGH*KKISRIW 312
>gb|DR078574.1|DR078574 RTFEPL1_5_C09.g1_A029 Roots plus added iron Pinus taeda cDNA clone
           RTFEPL1_5_C09_A029 5', mRNA sequence
          Length = 822

 Score =  168 bits (361), Expect = 3e-041
 Identities = 59/106 (55%), Positives = 81/106 (76%)
 Frame = +3 / -3

                                                                       
Query: 24  WRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVK 203
           W+K N+T  YH WQ+ N +R LWKLGTLP GL+TF+  T PLDR WH LGLGY+PNV+++
Sbjct: 811 WKKLNVTSRYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHILGLGYDPNVDMQ 632

                                                         
Query: 204 DIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
            I   AV+HYNGN+KPWL++ + +Y+ +W  +VNY   FL++CNI+
Sbjct: 631 LIESGAVLHYNGNMKPWLKLAMNRYKSFWEKYVNYLHPFLQKCNIH 494
>gb|BI202957.1|BI202957 NXPV_093_C03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
           cDNA clone NXPV_093_C03 5' similar to Arabidopsis
           thaliana sequence At3g25140 glycosyl transferase,
           putative see http://mips.gsf.de/proj/thal/db/index.html,
           mRNA sequence
          Length = 326

 Score =  166 bits (357), Expect = 1e-040
 Identities = 58/103 (56%), Positives = 76/103 (73%)
 Frame = +3 / +1

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N F L  WR++  TE YH WQ LNENR LWKLGTLP GL+T++  T PLD+SWH LGLGY
Sbjct: 13  NFFHLDAWRREKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYKTTKPLDKSWHVLGLGY 192

                                                      
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYD 311
           NP++++ +IR A V H+NGN+KPWL+  + +YR  W+ +  YD
Sbjct: 193 NPSISMDEIRNAXVXHFNGNMKPWLDXXMNQYRDTWTKYXXYD 321
>gb|DR112556.1|DR112556 RTS1_29_B07.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
           RTS1_29_B07_A029 3', mRNA sequence
          Length = 688

 Score =  158 bits (340), Expect = 3e-038
 Identities = 56/110 (50%), Positives = 78/110 (70%)
 Frame = +3 / +2

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N+FDL  W+  N+T  YH WQ+ N +R LWKLGTLP GL++F+  T PLDR WH LGLGY
Sbjct: 305 NVFDLVAWKNANVTSRYHYWQEQNVDRTLWKLGTLPPGLLSFYGLTEPLDRRWHVLGLGY 484

                                                             
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLREC 332
           + N++ + I   AVIH+NGN+KPWL++ + +Y+  W  +VNY    L++C
Sbjct: 485 DLNIDEQLIESGAVIHFNGNMKPWLKLAMKRYKAIWEMYVNYSHPLLQQC 634
>gb|AI812705.1|AI812705 18B3 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
          Length = 522

 Score =  129 bits (277), Expect(2) = 6e-035
 Identities = 48/104 (46%), Positives = 70/104 (67%)
 Frame = +3 / +3

                                                                       
Query: 72  NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
           N   + W+ GTLPA L+TF+N T  L+ SW  +GLG++  ++  DI ++ V+HYNGNLKP
Sbjct: 198 NRYNIPWRFGTLPASLITFYNMTHRLEDSWLSVGLGHDFGIDQLDIEKSPVLHYNGNLKP 377

                                                       
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNINP*TANSGAWFISFS 383
           WLEIG+ KY+ YW+ ++  +  F+ ECN+N *  +   W IS S
Sbjct: 378 WLEIGINKYKPYWAKYLKQEGQFMLECNVNG*CCDIFMWIISQS 509

 Score = 37.7 bits (76), Expect(2) = 6e-035
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3 / +3

                                  
Query: 3   NMFDLGDWRKQNITEVYHTWQKL 71
           N+ DL  WRKQ++T+VY  W K+
Sbjct: 126 NIIDLQQWRKQDLTKVYRRWLKM 194
>gb|DR015777.1|DR015777 STRS1_5_C07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
           cDNA clone STRS1_5_C07_A034 5', mRNA sequence
          Length = 716

 Score =  143 bits (306), Expect = 1e-033
 Identities = 51/94 (54%), Positives = 70/94 (74%)
 Frame = +3 / +1

                                                                       
Query: 87  LWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIG 266
           LWKLGTLP GL+TF+  T PLD+SWH  GLGYNP++++ +IR AAV+H+NG +KPWL+IG
Sbjct: 7   LWKLGTLPPGLITFYKTTKPLDKSWHVFGLGYNPSISMDEIRNAAVVHFNGFMKPWLDIG 186

                                             
Query: 267 LPKYRKYWSAHVNYDQVFLRECNINP*TANSGAW 368
           + +YR  W+ +V+YD  F++ CN   *   S  W
Sbjct: 187 MNQYRDTWTKYVDYDMEFVQMCNFGH*KKISRIW 288
>gb|DR015694.1|DR015694 STRS1_5_C07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
           cDNA clone STRS1_5_C07_A034 3', mRNA sequence
          Length = 690

 Score =  142 bits (304), Expect = 2e-033
 Identities = 49/93 (52%), Positives = 70/93 (75%)
 Frame = +3 / +1

                                                                       
Query: 90  WKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGL 269
           WKLGTLP GL+T++  T PLD+SWH LG GYNP++++ +IR AAV+H+NGN+KPWL+IG+
Sbjct: 1   WKLGTLPPGLITYYKTTKPLDKSWHVLGFGYNPSISMDEIRNAAVVHFNGNMKPWLDIGM 180

                                            
Query: 270 PKYRKYWSAHVNYDQVFLRECNINP*TANSGAW 368
            +YR  W+ +V++D  F++ CN   *   S  W
Sbjct: 181 NQYRDTWTKYVDFDMEFVQMCNFGH*KKISRIW 279
>gb|DR744023.1|DR744023 RTCU1_19_F03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
           RTCU1_19_F03_A029 5', mRNA sequence
          Length = 764

 Score =  135 bits (289), Expect(2) = 6e-033
 Identities = 46/96 (47%), Positives = 64/96 (66%)
 Frame = +3 / -2

                                                                       
Query: 51  YHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIH 230
           Y   + LN N  LW+LGTLP  L+ F     P+D SWH LGLGY P  ++ ++R+AAVIH
Sbjct: 643 YWLKENLNSNLTLWRLGTLPPALIAFNGHVHPIDPSWHMLGLGYQPETDLNNVRKAAVIH 464

                                               
Query: 231 YNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
           YNG  KPWL+I  P+ R +W+ ++NY   F++ C+I
Sbjct: 463 YNGQAKPWLDIAFPELRPFWTKYINYSNEFIKNCHI 356

 Score = 25.4 bits (49), Expect(2) = 6e-033
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2 / -1

                                
Query: 2   EHV*FGRLEKAKHH*GLPYLA 64
           EH+*F  LEK KH   L  LA
Sbjct: 698 EHL*FASLEKDKHPGNLSLLA 636
>gb|DT633664.1|DT633664 EST1148595 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PIMFX37 3' end, mRNA sequence
          Length = 812

 Score =  100 bits (214), Expect(2) = 2e-029
 Identities = 34/53 (64%), Positives = 45/53 (84%)
 Frame = +3 / +1

                                                                
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSW 161
           N+FDL +W+KQ+IT +YH WQ +NE+R+LWKLGTLP GL+TF+  T PLD+SW
Sbjct: 571 NVFDLKEWKKQDITGIYHKWQNMNEDRVLWKLGTLPPGLITFYGLTHPLDKSW 729

 Score = 48.3 bits (99), Expect(2) = 2e-029
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +3 / +2

                                      
Query: 162 HQLGLGYNPNVNVKDIRRAAVIHYNGN 242
           H LGLGYNP+V+  +I  AAV+HYNGN
Sbjct: 731 HVLGLGYNPSVDRLEIDNAAVVHYNGN 811
>gb|BX250554.1|BX250554 BX250554 Pinus pinaster differenciating xylem adult Pinus pinaster
           cDNA clone PP038D10, mRNA sequence
          Length = 370

 Score =  123 bits (264), Expect = 8e-028
 Identities = 44/96 (45%), Positives = 60/96 (62%)
 Frame = +3 / +2

                                                                       
Query: 51  YHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIH 230
           Y   + LN N  LW++GTLP  L+ F     P+D SWH LGLGY P  N+  ++ AAVIH
Sbjct: 26  YWLKKNLNSNLRLWRMGTLPPALIAFNGLVHPIDSSWHMLGLGYQPRTNLDSVQSAAVIH 205

                                               
Query: 231 YNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
           YNG  KPWL+I   + R  W+ +V++   F++ CNI
Sbjct: 206 YNGRAKPWLDIAFHELRPLWAKYVDFSDEFIKRCNI 313
>gb|CX651405.1|CX651405 COLD1_52_D12.b1_A029 Root cold Pinus taeda cDNA clone
           COLD1_52_D12_A029 3', mRNA sequence
          Length = 659

 Score =  123 bits (263), Expect = 1e-027
 Identities = 44/96 (45%), Positives = 60/96 (62%)
 Frame = +3 / +3

                                                                       
Query: 51  YHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIH 230
           Y   + LN N  LW++GTLP  L+ F     P+D SWH LGLGY P  N+  ++ AAVIH
Sbjct: 210 YWLKKNLNSNLRLWRMGTLPPALIAFNGLVHPIDPSWHMLGLGYQPRTNLDSVQSAAVIH 389

                                               
Query: 231 YNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
           YNG  KPWL+I   + R  W+ +V++   F++ CNI
Sbjct: 390 YNGRAKPWLDIAFHELRPLWAKYVDFSDEFIKRCNI 497
>gb|BG319249.1|BG319249 NXPV_019_E12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
           cDNA clone NXPV_019_E12 5' similar to Arabidopsis
           thaliana sequence At3g61130 unknown protein see
           http://mips.gsf.de/proj/thal/db/index.html, mRNA
           sequence
          Length = 365

 Score =  122 bits (260), Expect = 3e-027
 Identities = 46/95 (48%), Positives = 66/95 (69%)
 Frame = +3 / +1

                                                                       
Query: 99  GTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKY 278
           GTLPA L+TF+N T  L+ SW  +GLG++  ++  DI ++ V+HYNGNLKPWLEIG+ KY
Sbjct: 4   GTLPASLITFYNMTHRLEDSWLSVGLGHDFGIDQLDIEKSPVLHYNGNLKPWLEIGINKY 183

                                              
Query: 279 RKYWSAHVNYDQVFLRECNINP*TANSGAWFISFS 383
           + YW+ ++  +  F+ ECN+N *  +   W IS S
Sbjct: 184 KPYWAKYLKQEGQFMLECNVNG*CCDIFMWXISQS 288
>gb|DR060177.1|DR060177 RTNIT1_26_E10.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
           RTNIT1_26_E10_A029 3', mRNA sequence
          Length = 793

 Score =  117 bits (250), Expect = 7e-026
 Identities = 41/80 (51%), Positives = 59/80 (73%)
 Frame = +3 / +3

                                                                       
Query: 129 WNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNY 308
           +  T PLD+SWH LGLGYNP++++ +IR AAV+H+NGN+KPWL+IG+ +YR  W+ +V+Y
Sbjct: 3   YKTTKPLDKSWHVLGLGYNPSISMDEIRNAAVVHFNGNMKPWLDIGMNQYRDTWTKYVDY 182

                               
Query: 309 DQVFLRECNINP*TANSGAW 368
           D  F++ CN   *   S  W
Sbjct: 183 DMEFVQMCNFGH*KKISRIW 242
>gb|BQ107024.1|BQ107024 NXLV085_F11_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
           clone NXLV085_F11 5' similar to Arabidopsis thaliana
           sequence At2g20807 unknown protein see
           http://mips.gsf.de/proj/thal/db/index.html, mRNA
           sequence
          Length = 732

 Score =  111 bits (236), Expect = 6e-024
 Identities = 41/67 (61%), Positives = 52/67 (77%)
 Frame = +3 / +2

                                                                       
Query: 3   NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
           N+FDL  W+K N+T  YH WQ+ N +R LWKLGTLP GL+TF+  T PLDR WH LGLGY
Sbjct: 470 NVFDLVAWKKLNVTSRYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHILGLGY 649

                  
Query: 183 NPNVNVK 203
           +PNV+++
Sbjct: 650 DPNVDMQ 670
>gb|BX252912.1|BX252912 BX252912 Pinus pinaster differenciating xylem adult Pinus pinaster
           cDNA clone PP074G08, mRNA sequence
          Length = 317

 Score =  105 bits (225), Expect = 2e-022
 Identities = 37/79 (46%), Positives = 50/79 (63%)
 Frame = +3 / +2

                                                                       
Query: 102 TLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYR 281
           TLP  L+ F     P+D SWH LGLGY P  N+  ++ AAVIHYNG  KPWL+I   + R
Sbjct: 2   TLPPALIAFNGLVHPIDSSWHMLGLGYQPRTNLDSVQSAAVIHYNGRAKPWLDIAFHELR 181

                              
Query: 282 KYWSAHVNYDQVFLRECNI 338
             W+ +V++   F++ CNI
Sbjct: 182 PLWAKYVDFSDEFIKRCNI 238
  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 328,725,168
Number of Sequences: 355925
Number of extensions: 4745408
Number of successful extensions: 42067
Number of sequences better than 1.0e-020: 31
length of database: 72,425,745
effective HSP length: 51
effective length of database: 54,273,570
effective search space used: 7923941220
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)