TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3023825.2.1
(1094 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO361739.1|CO361739 NDL2_6_F01.g1_A029 Needles control 2... 215 2e-073
gb|CO361728.1|CO361728 NDL2_6_E01.g1_A029 Needles control 2... 215 2e-073
gb|DR098106.1|DR098106 STRR1_39_D06.b1_A033 Stem Response R... 215 5e-073
gb|CO198952.1|CO198952 GEO1_17_E10.g1_A029 Root gravitropis... 193 2e-066
gb|CF395619.1|CF395619 RTDS2_12_C07.g1_A021 Drought-stresse... 131 1e-063
gb|CF393816.1|CF393816 RTDS2_1_A10.g1_A021 Drought-stressed... 177 5e-059
gb|CF670333.1|CF670333 RTCNT1_49_C06.g1_A029 Root control P... 177 5e-059
gb|CF668506.1|CF668506 RTCNT1_36_H10.g1_A029 Root control P... 177 5e-059
gb|AF283816.1|AF283816 Pinus taeda calreticulin mRNA, compl... 174 3e-058
gb|CV036192.1|CV036192 RTNACL1_57_H03.b1_A029 Roots plus ad... 174 3e-058
gb|DR012575.1|DR012575 HEAT1_13_E12.g1_A029 Root at 37 C fo... 174 3e-058
gb|DR744725.1|DR744725 RTCU1_24_B03.g1_A029 Roots plus adde... 174 3e-058
gb|CF475292.1|CF475292 RTWW2_13_H04.b1_A021 Well-watered lo... 174 3e-058
gb|CF396421.1|CF396421 RTDS2_21_H12.g1_A021 Drought-stresse... 173 9e-058
gb|DR022118.1|DR022118 STRS1_49_A10.b1_A034 Shoot tip pitch... 177 1e-057
gb|CO366415.1|CO366415 RTK1_27_E11.g1_A029 Roots minus pota... 170 4e-057
gb|CO158387.1|CO158387 FLD1_6_C10.g1_A029 Root flooded Pinu... 215 6e-057
gb|CV031923.1|CV031923 RTNACL1_4_D03.g1_A029 Roots plus add... 215 6e-057
gb|DR019100.1|DR019100 STRS1_27_G03.g1_A034 Shoot tip pitch... 174 5e-055
gb|DR052273.1|DR052273 RTCA1_3_C03.g1_A029 Roots minus calc... 162 9e-055
gb|DR110346.1|DR110346 RTS1_10_H03.b1_A029 Roots minus sulf... 177 4e-053
gb|CO364984.1|CO364984 RTK1_23_A06.b1_A029 Roots minus pota... 177 2e-052
gb|DR167453.1|DR167453 RTPHOS1_18_H05.g1_A029 Roots minus p... 177 5e-052
gb|CO175700.1|CO175700 NDL1_56_A03.g1_A029 Needles control ... 135 1e-049
gb|CR393186.1|CR393186 CR393186 RN Pinus pinaster cDNA clon... 177 4e-047
gb|CX647947.1|CX647947 COLD1_25_C01.g1_A029 Root cold Pinus... 174 1e-045
gb|CF668421.1|CF668421 RTCNT1_36_H10.b1_A029 Root control P... 177 9e-044
gb|CF670258.1|CF670258 RTCNT1_49_C06.b1_A029 Root control P... 177 9e-044
gb|CV034792.1|CV034792 RTNACL1_11_D05.g1_A029 Roots plus ad... 176 2e-043
gb|DR012617.1|DR012617 HEAT1_14_A11.b1_A029 Root at 37 C fo... 174 8e-043
gb|DR012699.1|DR012699 HEAT1_14_A11.g1_A029 Root at 37 C fo... 174 8e-043
gb|DR744660.1|DR744660 RTCU1_24_B03.b1_A029 Roots plus adde... 174 8e-043
gb|BE662302.1|BE662302 ST84/ST84D02 Pine TriplEx shoot tip ... 164 1e-042
gb|AJ541803.1|AJ541803 AJ541803 Pinus pinaster differentiat... 171 2e-042
gb|AW290111.1|AW290111 NXNV010D03F Nsf Xylem Normal wood Ve... 170 1e-041
gb|CD026738.1|CD026738 NXNV010D03 Nsf Xylem Normal wood Ver... 170 1e-041
gb|AA556373.1|AA556373 228 Loblolly pine C Pinus taeda cDNA... 168 5e-041
gb|CO200857.1|CO200857 RTCNT2_2_B11.b1_A029 Root control 2 ... 167 1e-040
gb|DR091549.1|DR091549 RTAL1_22_H09.b1_A029 Roots plus adde... 163 2e-039
gb|DR098180.1|DR098180 STRR1_39_D06.g1_A033 Stem Response R... 158 6e-038
gb|CO198875.1|CO198875 GEO1_17_E10.b1_A029 Root gravitropis... 156 3e-037
gb|AW289804.1|AW289804 NXNV006D09F Nsf Xylem Normal wood Ve... 104 3e-037
gb|CD028390.1|CD028390 NXNV006D09 Nsf Xylem Normal wood Ver... 104 3e-037
gb|AL750674.1|AL750674 AL750674 RN Pinus pinaster cDNA clon... 103 5e-036
gb|BF220810.1|BF220810 NXCI_154_B05_F NXCI (Nsf Xylem Compr... 100 7e-036
gb|CF671078.1|CF671078 RTCNT1_54_C08.g1_A029 Root control P... 147 1e-034
gb|DR024916.1|DR024916 STRS1_68_H05.b1_A034 Shoot tip pitch... 144 1e-033
gb|BE662548.1|BE662548 ST87/ST87F06 Pine TriplEx shoot tip ... 91 5e-033
gb|CV033612.1|CV033612 RTNACL1_35_C08.g1_A029 Roots plus ad... 136 2e-031
gb|CF396280.1|CF396280 RTDS2_21_H12.b1_A021 Drought-stresse... 132 4e-030
gb|AI812952.1|AI812952 22G9 Pine Lambda Zap Xylem library P... 79 2e-029
gb|DR011478.1|DR011478 HEAT1_6_A10.b1_A029 Root at 37 C for... 127 1e-028
gb|CX652896.1|CX652896 COLD1_62_E01.b1_A029 Root cold Pinus... 59 3e-025
gb|CO200455.1|CO200455 GEO2_7_C05.g1_A032 Root gravitropism... 59 3e-025
gb|CO167127.1|CO167127 FLD1_67_B05.b1_A029 Root flooded Pin... 55 3e-024
gb|BG039134.1|BG039134 NXSI_095_C06_F NXSI (Nsf Xylem Side ... 96 9e-023
gb|DR021364.1|DR021364 STRS1_44_D10.b1_A034 Shoot tip pitch... 104 1e-021
>gb|CO361739.1|CO361739 NDL2_6_F01.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_6_F01_A029 5', mRNA sequence
Length = 823
Score = 215 bits (463), Expect(2) = 2e-073
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
GIWK + NPAYKGPWK K+IKNPNYKGKWKTPW+DNPEFEDDPDLYV KPLKY+GIEV
Sbjct: 401 GIWKSPKIPNPAYKGPWKAKKIKNPNYKGKWKTPWVDNPEFEDDPDLYVFKPLKYVGIEV 580
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWGAN 464
WQVKAGSV+DNIL+CDDP+YAR+V EETWG N
Sbjct: 581 WQVKAGSVYDNILVCDDPQYAREVAEETWGRN 676
Score = 158 bits (340), Expect = 6e-038
Identities = 79/156 (50%), Positives = 88/156 (56%)
Frame = -3 / -3
Query: 477 FQPPYLHPKFPQQPFLHTQGHHKSECCRKLNQLLPAKLQFQYTSKASAHKDLDHPQTLDY 298
F P P PQQP HT+ HH +CC K + PA+LQ + SKA HKDLDH Q LD
Sbjct: 689 FPSPCFFPMSPQQPPEHTEDHHTLKCCHKPSLPSPARLQSPHISKA*RHKDLDHLQILDC 510
Query: 297 RSMGSSIYPCS*DF*FSCVSKVPCMLDLIPFWASIFHPHLHPMCQAFCPSDQESVLG*NH 118
+ M S PCS DF*FS SK PCMLD SI H P QAF P D +L
Sbjct: 509 QPMEFSTSPCSWDF*FSSPSKAPCMLDWGSLVISISHHLPPPSHQAFLPLDLVFLLEYYR 330
Query: 117 SPLA*LHQDLQYILCHPNP*AFWREHP*FYEEGEYP 10
SPL HQD QY L HPN *AFW + *F+E EYP
Sbjct: 329 SPLVLWHQDHQYTLYHPNL*AFWPSNL*FFEAEEYP 222
Score = 156 bits (336), Expect = 2e-037
Identities = 80/149 (53%), Positives = 101/149 (67%)
Frame = +1 / +3
Query: 10 GIFSLLVKLRMFTPKGLRIGMTENILKILMKLSQRAMILSQNRFLIRRTKSLTHGMKMRM 189
GIF L K + PK L+IGM E+IL ILM +QRA I+ Q ++ I+R KSL G + M
Sbjct: 222 GIFFRLEKSEI*RPKSLKIGMIESILMILMPQNQRATIIFQQKYQIQRQKSLMTGRRKMM 401
Query: 190 EYGSPEWYQIQHTRDLGNARELKILTTRVNGRPHGSIIQSLRMIQIFMC*SL*SILELKF 369
YG+ + IQHTR LG R+LKI TTR +G+ HG IQ+L+MIQIFM SL*++ LK
Sbjct: 402 GYGNHQRSPIQHTRGLGRRRKLKIPTTRGSGKLHGLTIQNLKMIQIFMSSSL*NMWGLKS 581
Query: 370 GR*KLVQFSTTF*FVMTLSMQERLLRKLG 456
GR*+ +F TTF* VM LSM RLLR+ G
Sbjct: 582 GR*RQARFMTTF*CVMILSMLGRLLRRHG 668
Score = 105 bits (223), Expect = 8e-022
Identities = 68/136 (50%), Positives = 86/136 (63%)
Frame = +2 / +1
Query: 11 GYSPSS*N*GCSRQKA*GLG*QRIY*RS**S*ARGL*FYPKTDS*SEGQKA*HMG*R*GW 190
GYS +S N QKA* LG* R+Y* S* RGL Y ++ S+G+KA* +G W
Sbjct: 223 GYSSASKNQRFEGQKA*RLG**RVY**S*CHKTRGLR*YSSRNTRSKGKKA**LGGGR*W 402
Query: 191 NMEAQNGIKSSIQGTLETQEN*KS*LQG*MEDPMDR*SRV*G*SRSLCAEAFEVYWN*SL 370
+ME +SSIQG LE +EN*KS LQG +E+ M SR+* *SRSLC +AFE+ +*SL
Sbjct: 403 DMEITKDPQSSIQGALEGEEN*KSQLQGEVENSMG*QSRI*R*SRSLCLQAFEICGD*SL 582
Query: 371 AGKSWFSFRQHSDL** 418
AG+ QH +**
Sbjct: 583 AGEGRLGL*QHFSV** 630
Score = 86.3 bits (182), Expect(2) = 2e-034
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = -1 / -1
Query: 464 ICTPSFLNNLSCILRVITNQNVVEN*TSFYLPNFNSNILQRLQHXXXXXXXXXXXIDPWG 285
+ +P L+NL ILR+IT+ NVV N +LP+FN +I QRL+ ++PW
Sbjct: 676 VSSPCLLSNLPSILRIITH*NVVINRACLHLPDFNPHIFQRLEDIKIWIIFKFWIVNPWS 497
Query: 284 LPFTLVVRIFNSLAFPRSLVCWI 216
P LVV IFN L PR LVCWI
Sbjct: 496 FPLPLVVGIFNFLRLPRPLVCWI 428
Score = 82.2 bits (173), Expect(2) = 2e-073
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPPRKI+D+ AK+PKDWDDREYI+DPD KPEGY
Sbjct: 224 DILPPRKIRDLKAKKPKDWDDREYIDDPDATKPEGY 331
Score = 80.3 bits (169), Expect(2) = 2e-034
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = -1 / -1
Query: 197 PYSILIFIPCVRLFVLRIRNLFWDRIIALWLNFIRIFNIFSVIPILRPFGVNILNFTRRE 18
PY I+ +P +RLF L I W+ I+ALW IRI NI S+IPI R FG+ I +F+RR+
Sbjct: 409 PYPIIFLLPVIRLFCLWIWYFCWNIIVALWFCGIRIINILSIIPIFRLFGLQISDFSRRK 230
Query: 17 NIP 9
NIP
Sbjct: 229 NIP 221
>gb|CO361728.1|CO361728 NDL2_6_E01.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_6_E01_A029 5', mRNA sequence
Length = 761
Score = 215 bits (463), Expect(2) = 2e-073
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
GIWK + NPAYKGPWK K+IKNPNYKGKWKTPW+DNPEFEDDPDLYV KPLKY+GIEV
Sbjct: 401 GIWKSPKIPNPAYKGPWKAKKIKNPNYKGKWKTPWVDNPEFEDDPDLYVFKPLKYVGIEV 580
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWGAN 464
WQVKAGSV+DNIL+CDDP+YAR+V EETWG N
Sbjct: 581 WQVKAGSVYDNILVCDDPQYAREVAEETWGRN 676
Score = 158 bits (340), Expect = 6e-038
Identities = 79/156 (50%), Positives = 88/156 (56%)
Frame = -3 / -1
Query: 477 FQPPYLHPKFPQQPFLHTQGHHKSECCRKLNQLLPAKLQFQYTSKASAHKDLDHPQTLDY 298
F P P PQQP HT+ HH +CC K + PA+LQ + SKA HKDLDH Q LD
Sbjct: 689 FPSPCFFPMSPQQPPEHTEDHHTLKCCHKPSLPSPARLQSPHISKA*RHKDLDHLQILDC 510
Query: 297 RSMGSSIYPCS*DF*FSCVSKVPCMLDLIPFWASIFHPHLHPMCQAFCPSDQESVLG*NH 118
+ M S PCS DF*FS SK PCMLD SI H P QAF P D +L
Sbjct: 509 QPMEFSTSPCSWDF*FSSPSKAPCMLDWGSLVISISHHLPPPSHQAFLPLDLVFLLEYYR 330
Query: 117 SPLA*LHQDLQYILCHPNP*AFWREHP*FYEEGEYP 10
SPL HQD QY L HPN *AFW + *F+E EYP
Sbjct: 329 SPLVLWHQDHQYTLYHPNL*AFWPSNL*FFEAEEYP 222
Score = 156 bits (336), Expect = 2e-037
Identities = 80/149 (53%), Positives = 101/149 (67%)
Frame = +1 / +3
Query: 10 GIFSLLVKLRMFTPKGLRIGMTENILKILMKLSQRAMILSQNRFLIRRTKSLTHGMKMRM 189
GIF L K + PK L+IGM E+IL ILM +QRA I+ Q ++ I+R KSL G + M
Sbjct: 222 GIFFRLEKSEI*RPKSLKIGMIESILMILMPQNQRATIIFQQKYQIQRQKSLMTGRRKMM 401
Query: 190 EYGSPEWYQIQHTRDLGNARELKILTTRVNGRPHGSIIQSLRMIQIFMC*SL*SILELKF 369
YG+ + IQHTR LG R+LKI TTR +G+ HG IQ+L+MIQIFM SL*++ LK
Sbjct: 402 GYGNHQRSPIQHTRGLGRRRKLKIPTTRGSGKLHGLTIQNLKMIQIFMSSSL*NMWGLKS 581
Query: 370 GR*KLVQFSTTF*FVMTLSMQERLLRKLG 456
GR*+ +F TTF* VM LSM RLLR+ G
Sbjct: 582 GR*RQARFMTTF*CVMILSMLGRLLRRHG 668
Score = 105 bits (223), Expect = 8e-022
Identities = 68/136 (50%), Positives = 86/136 (63%)
Frame = +2 / +1
Query: 11 GYSPSS*N*GCSRQKA*GLG*QRIY*RS**S*ARGL*FYPKTDS*SEGQKA*HMG*R*GW 190
GYS +S N QKA* LG* R+Y* S* RGL Y ++ S+G+KA* +G W
Sbjct: 223 GYSSASKNQRFEGQKA*RLG**RVY**S*CHKTRGLR*YSSRNTRSKGKKA**LGGGR*W 402
Query: 191 NMEAQNGIKSSIQGTLETQEN*KS*LQG*MEDPMDR*SRV*G*SRSLCAEAFEVYWN*SL 370
+ME +SSIQG LE +EN*KS LQG +E+ M SR+* *SRSLC +AFE+ +*SL
Sbjct: 403 DMEITKDPQSSIQGALEGEEN*KSQLQGEVENSMG*QSRI*R*SRSLCLQAFEICGD*SL 582
Query: 371 AGKSWFSFRQHSDL** 418
AG+ QH +**
Sbjct: 583 AGEGRLGL*QHFSV** 630
Score = 86.3 bits (182), Expect(2) = 2e-034
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = -1 / -2
Query: 464 ICTPSFLNNLSCILRVITNQNVVEN*TSFYLPNFNSNILQRLQHXXXXXXXXXXXIDPWG 285
+ +P L+NL ILR+IT+ NVV N +LP+FN +I QRL+ ++PW
Sbjct: 676 VSSPCLLSNLPSILRIITH*NVVINRACLHLPDFNPHIFQRLEDIKIWIIFKFWIVNPWS 497
Query: 284 LPFTLVVRIFNSLAFPRSLVCWI 216
P LVV IFN L PR LVCWI
Sbjct: 496 FPLPLVVGIFNFLRLPRPLVCWI 428
Score = 82.2 bits (173), Expect(2) = 2e-073
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPPRKI+D+ AK+PKDWDDREYI+DPD KPEGY
Sbjct: 224 DILPPRKIRDLKAKKPKDWDDREYIDDPDATKPEGY 331
Score = 80.3 bits (169), Expect(2) = 2e-034
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = -1 / -2
Query: 197 PYSILIFIPCVRLFVLRIRNLFWDRIIALWLNFIRIFNIFSVIPILRPFGVNILNFTRRE 18
PY I+ +P +RLF L I W+ I+ALW IRI NI S+IPI R FG+ I +F+RR+
Sbjct: 409 PYPIIFLLPVIRLFCLWIWYFCWNIIVALWFCGIRIINILSIIPIFRLFGLQISDFSRRK 230
Query: 17 NIP 9
NIP
Sbjct: 229 NIP 221
>gb|DR098106.1|DR098106 STRR1_39_D06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_39_D06_A033 3', mRNA sequence
Length = 667
Score = 215 bits (463), Expect(2) = 5e-073
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +3 / -2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
GIWK + NPAYKGPWK K+IKNPNYKGKWKTPW+DNPEFEDDPDLYV KPLKY+GIEV
Sbjct: 306 GIWKAPKIPNPAYKGPWKAKKIKNPNYKGKWKTPWVDNPEFEDDPDLYVFKPLKYVGIEV 127
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWGAN 464
WQVKAGSV+DNIL+CDDP+YAR+V EETWG N
Sbjct: 126 WQVKAGSVYDNILVCDDPQYAREVAEETWGRN 31
Score = 158 bits (340), Expect = 6e-038
Identities = 79/156 (50%), Positives = 88/156 (56%)
Frame = -3 / +3
Query: 477 FQPPYLHPKFPQQPFLHTQGHHKSECCRKLNQLLPAKLQFQYTSKASAHKDLDHPQTLDY 298
F P P PQQP HT+ HH +CC K + PA+LQ + SKA HKDLDH Q LD
Sbjct: 18 FPSPCFFPMSPQQPPEHTEDHHTLKCCHKPSLPSPARLQSPHISKA*RHKDLDHLQILDC 197
Query: 297 RSMGSSIYPCS*DF*FSCVSKVPCMLDLIPFWASIFHPHLHPMCQAFCPSDQESVLG*NH 118
+ M S PCS DF*FS SK PCMLD SI H P QAF P D +L
Sbjct: 198 QPMEFSTSPCSWDF*FSSPSKAPCMLDWGSLVLSISHHLPPPSHQAFLPLDLVFLLEYYR 377
Query: 117 SPLA*LHQDLQYILCHPNP*AFWREHP*FYEEGEYP 10
SPL HQD QY L HPN *AFW + *F+E EYP
Sbjct: 378 SPLVCWHQDHQYTLYHPNL*AFWPSNL*FFEAEEYP 485
Score = 156 bits (336), Expect = 2e-037
Identities = 80/149 (53%), Positives = 100/149 (67%)
Frame = +1 / -3
Query: 10 GIFSLLVKLRMFTPKGLRIGMTENILKILMKLSQRAMILSQNRFLIRRTKSLTHGMKMRM 189
GIF L K + PK L+IGM E+IL ILM +QRA I+ Q ++ I+R KSL G + M
Sbjct: 485 GIFFRLEKSEI*RPKSLKIGMIESILMILMPTNQRATIIFQQKYQIQRQKSLMTGRRKMM 306
Query: 190 EYGSPEWYQIQHTRDLGNARELKILTTRVNGRPHGSIIQSLRMIQIFMC*SL*SILELKF 369
YG + IQHTR LG R+LKI TTR +G+ HG IQ+L+MIQIFM SL*++ LK
Sbjct: 305 GYGKHQRSPIQHTRGLGRRRKLKIPTTRGSGKLHGLTIQNLKMIQIFMSSSL*NMWGLKS 126
Query: 370 GR*KLVQFSTTF*FVMTLSMQERLLRKLG 456
GR*+ +F TTF* VM LSM RLLR+ G
Sbjct: 125 GR*RQARFMTTF*CVMILSMLGRLLRRHG 39
Score = 106 bits (226), Expect = 3e-022
Identities = 68/136 (50%), Positives = 87/136 (63%)
Frame = +2 / -1
Query: 11 GYSPSS*N*GCSRQKA*GLG*QRIY*RS**S*ARGL*FYPKTDS*SEGQKA*HMG*R*GW 190
GYS +S N QKA* LG* R+Y* S* RGL Y ++ S+G+KA* +G W
Sbjct: 484 GYSSASKNQRFEGQKA*RLG**RVY**S*CQQTRGLR*YSSRNTRSKGKKA**LGGGR*W 305
Query: 191 NMEAQNGIKSSIQGTLETQEN*KS*LQG*MEDPMDR*SRV*G*SRSLCAEAFEVYWN*SL 370
+ME+ +SSIQG LE +EN*KS LQG +E+ M SR+* *SRSLC +AFE+ +*SL
Sbjct: 304 DMESTKDPQSSIQGALEGEEN*KSQLQGEVENSMG*QSRI*R*SRSLCLQAFEICGD*SL 125
Query: 371 AGKSWFSFRQHSDL** 418
AG+ QH +**
Sbjct: 124 AGEGRLGL*QHFSV** 77
Score = 86.3 bits (182), Expect(2) = 2e-034
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = -1 / +1
Query: 464 ICTPSFLNNLSCILRVITNQNVVEN*TSFYLPNFNSNILQRLQHXXXXXXXXXXXIDPWG 285
+ +P L+NL ILR+IT+ NVV N +LP+FN +I QRL+ ++PW
Sbjct: 31 VSSPCLLSNLPSILRIITH*NVVINRACLHLPDFNPHIFQRLEDIKIWIIFKFWIVNPWS 210
Query: 284 LPFTLVVRIFNSLAFPRSLVCWI 216
P LVV IFN L PR LVCWI
Sbjct: 211 FPLPLVVGIFNFLRLPRPLVCWI 279
Score = 80.8 bits (170), Expect(2) = 5e-073
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3 / -2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPPRKI+D+ AK+PKDWDDREYI+DPD KPEGY
Sbjct: 483 DILPPRKIRDLKAKKPKDWDDREYIDDPDANKPEGY 376
Score = 80.3 bits (169), Expect(2) = 2e-034
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = -1 / +1
Query: 197 PYSILIFIPCVRLFVLRIRNLFWDRIIALWLNFIRIFNIFSVIPILRPFGVNILNFTRRE 18
PY I+ +P +RLF L I W+ I+ALW IRI NI S+IPI R FG+ I +F+RR+
Sbjct: 298 PYPIIFLLPVIRLFCLWIWYFCWNIIVALWFVGIRIINILSIIPIFRLFGLQISDFSRRK 477
Query: 17 NIP 9
NIP
Sbjct: 478 NIP 486
>gb|CO198952.1|CO198952 GEO1_17_E10.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_17_E10_A029 5', mRNA sequence
Length = 800
Score = 193 bits (416), Expect(2) = 2e-066
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
GIWK + NPAYKGPWK K+IKNPNYKGKWKTPW+DNPEFEDDPDLYV KPLKY+GIEV
Sbjct: 556 GIWKAPKIPNPAYKGPWKAKKIKNPNYKGKWKTPWVDNPEFEDDPDLYVFKPLKYVGIEV 735
Query: 369 WQVKAGSVFDNILICDDPEYA 431
WQVKAGSV+DNIL+CDDP+YA
Sbjct: 736 WQVKAGSVYDNILVCDDPQYA 798
Score = 149 bits (320), Expect = 3e-035
Identities = 75/140 (53%), Positives = 94/140 (67%)
Frame = +1 / +2
Query: 10 GIFSLLVKLRMFTPKGLRIGMTENILKILMKLSQRAMILSQNRFLIRRTKSLTHGMKMRM 189
GIF L K + PK L+IGM E+IL ILM +QRA I+ Q ++ I+R KSL G + M
Sbjct: 377 GIFFRLEKSEI*RPKSLKIGMIESILMILMPTNQRATIIFQQKYQIQRQKSLMTGRRKMM 556
Query: 190 EYGSPEWYQIQHTRDLGNARELKILTTRVNGRPHGSIIQSLRMIQIFMC*SL*SILELKF 369
YG + IQHTR LG R+LKI TTR +G+ HG IQ+L+MIQIFM SL*++ LK
Sbjct: 557 GYGKHQRSPIQHTRGLGRRRKLKIPTTRASGKLHGLTIQNLKMIQIFMSSSL*NMWGLKS 736
Query: 370 GR*KLVQFSTTF*FVMTLSM 429
GR*+ +F TTF* VM LSM
Sbjct: 737 GR*RQARFMTTF*CVMILSM 796
Score = 145 bits (311), Expect = 6e-034
Identities = 72/140 (51%), Positives = 81/140 (57%)
Frame = -3 / -2
Query: 429 HTQGHHKSECCRKLNQLLPAKLQFQYTSKASAHKDLDHPQTLDYRSMGSSIYPCS*DF*F 250
HT+ HH +CC K + PA+LQ + SKA HKDLDH Q LD + M S PCS DF*F
Sbjct: 796 HTEDHHTLKCCHKPSLPSPARLQSPHISKA*RHKDLDHLQILDCQPMEFSTCPCSWDF*F 617
Query: 249 SCVSKVPCMLDLIPFWASIFHPHLHPMCQAFCPSDQESVLG*NHSPLA*LHQDLQYILCH 70
S SK PCMLD SI H P QAF P D +L SPL HQD QY L H
Sbjct: 616 SSPSKAPCMLDWGSLVLSISHHLPPPSHQAFLPLDLVFLLEYYRSPLVCWHQDHQYTLYH 437
Query: 69 PNP*AFWREHP*FYEEGEYP 10
PN *AFW + *F+E EYP
Sbjct: 436 PNL*AFWPSNL*FFEAEEYP 377
Score = 106 bits (226), Expect = 3e-022
Identities = 68/136 (50%), Positives = 87/136 (63%)
Frame = +2 / +3
Query: 11 GYSPSS*N*GCSRQKA*GLG*QRIY*RS**S*ARGL*FYPKTDS*SEGQKA*HMG*R*GW 190
GYS +S N QKA* LG* R+Y* S* RGL Y ++ S+G+KA* +G W
Sbjct: 378 GYSSASKNQRFEGQKA*RLG**RVY**S*CQQTRGLR*YSSRNTRSKGKKA**LGGGR*W 557
Query: 191 NMEAQNGIKSSIQGTLETQEN*KS*LQG*MEDPMDR*SRV*G*SRSLCAEAFEVYWN*SL 370
+ME+ +SSIQG LE +EN*KS LQG +E+ M SR+* *SRSLC +AFE+ +*SL
Sbjct: 558 DMESTKDPQSSIQGALEGEEN*KSQLQGQVENSMG*QSRI*R*SRSLCLQAFEICGD*SL 737
Query: 371 AGKSWFSFRQHSDL** 418
AG+ QH +**
Sbjct: 738 AGEGRLGL*QHFSV** 785
Score = 80.8 bits (170), Expect(2) = 2e-066
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3 / +1
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPPRKI+D+ AK+PKDWDDREYI+DPD KPEGY
Sbjct: 379 DILPPRKIRDLKAKKPKDWDDREYIDDPDANKPEGY 486
Score = 80.3 bits (169), Expect(2) = 2e-031
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = -1 / -3
Query: 197 PYSILIFIPCVRLFVLRIRNLFWDRIIALWLNFIRIFNIFSVIPILRPFGVNILNFTRRE 18
PY I+ +P +RLF L I W+ I+ALW IRI NI S+IPI R FG+ I +F+RR+
Sbjct: 564 PYPIIFLLPVIRLFCLWIWYFCWNIIVALWFVGIRIINILSIIPIFRLFGLQISDFSRRK 385
Query: 17 NIP 9
NIP
Sbjct: 384 NIP 376
Score = 76.7 bits (161), Expect(2) = 2e-031
Identities = 34/71 (47%), Positives = 42/71 (59%)
Frame = -1 / -3
Query: 428 ILRVITNQNVVEN*TSFYLPNFNSNILQRLQHXXXXXXXXXXXIDPWGLPFTLVVRIFNS 249
ILR+IT+ NVV N +LP+FN +I QRL+ ++PW P LVV IFN
Sbjct: 795 ILRIITH*NVVINRACLHLPDFNPHIFQRLEDIKIWIIFKFWIVNPWSFPLALVVGIFNF 616
Query: 248 LAFPRSLVCWI 216
L PR LVCWI
Sbjct: 615 LRLPRPLVCWI 583
>gb|CF395619.1|CF395619 RTDS2_12_C07.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_12_C07_A021 5', mRNA sequence
Length = 755
Score = 131 bits (281), Expect(3) = 1e-063
Identities = 46/57 (80%), Positives = 49/57 (85%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIG 359
GIWK + NPAYKGPWK K+IKNPNYKGKWKTPW+DNPEFEDDPDLYV KPLK G
Sbjct: 508 GIWKAPKIPNPAYKGPWKAKKIKNPNYKGKWKTPWVDNPEFEDDPDLYVFKPLKICG 678
Score = 122 bits (262), Expect(2) = 1e-030
Identities = 60/119 (50%), Positives = 78/119 (65%)
Frame = +1 / +2
Query: 10 GIFSLLVKLRMFTPKGLRIGMTENILKILMKLSQRAMILSQNRFLIRRTKSLTHGMKMRM 189
GIF L K + PK L+IGM E+IL ILM +QRA I+ Q ++ I+R KSL G + M
Sbjct: 329 GIFFRLEKSEI*RPKSLKIGMIESILMILMPTNQRATIIFQQKYQIQRQKSLMTGRRKMM 508
Query: 190 EYGSPEWYQIQHTRDLGNARELKILTTRVNGRPHGSIIQSLRMIQIFMC*SL*SILELK 366
YG + IQHTR LG R+LKI TTR +G+ HG IQ+L+MIQIFM SL* + ++
Sbjct: 509 GYGKHQRSPIQHTRGLGRRRKLKIPTTRASGKLHGLTIQNLKMIQIFMSSSL*KYVGIE 685
Score = 116 bits (249), Expect(2) = 2e-035
Identities = 61/113 (53%), Positives = 65/113 (57%)
Frame = -3 / -2
Query: 348 SKASAHKDLDHPQTLDYRSMGSSIYPCS*DF*FSCVSKVPCMLDLIPFWASIFHPHLHPM 169
SKA HKDLDH Q LD + M S PCS DF*FS SK PCMLD SI H P
Sbjct: 667 SKA*RHKDLDHLQILDCQPMEFSTCPCSWDF*FSSPSKAPCMLDWGSLVLSISHHLPPPS 488
Query: 168 CQAFCPSDQESVLG*NHSPLA*LHQDLQYILCHPNP*AFWREHP*FYEEGEYP 10
QAF P D +L SPL HQD QY L HPN *AFW + *F+E EYP
Sbjct: 487 HQAFLPLDLVFLLEYYRSPLVCWHQDHQYTLYHPNL*AFWPSNL*FFEAEEYP 329
Score = 80.8 bits (170), Expect(3) = 1e-063
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3 / +1
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPPRKI+D+ AK+PKDWDDREYI+DPD KPEGY
Sbjct: 331 DILPPRKIRDLKAKKPKDWDDREYIDDPDANKPEGY 438
Score = 80.3 bits (169), Expect(3) = 2e-027
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = -1 / -3
Query: 197 PYSILIFIPCVRLFVLRIRNLFWDRIIALWLNFIRIFNIFSVIPILRPFGVNILNFTRRE 18
PY I+ +P +RLF L I W+ I+ALW IRI NI S+IPI R FG+ I +F+RR+
Sbjct: 516 PYPIIFLLPVIRLFCLWIWYFCWNIIVALWFVGIRIINILSIIPIFRLFGLQISDFSRRK 337
Query: 17 NIP 9
NIP
Sbjct: 336 NIP 328
Score = 71.2 bits (149), Expect(3) = 1e-063
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = +3 / +2
Query: 348 KYIGIEVWQVKAGSVFDNILICDDPEYAR 434
KY+GIEVWQVKAGSV+DNIL+CDDP+YAR
Sbjct: 668 KYVGIEVWQVKAGSVYDNILVCDDPQYAR 754
Score = 53.3 bits (110), Expect(2) = 2e-035
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = -2 / -3
Query: 430 AYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
AY GSS +MLS TEPAFTCQTSIP YF+
Sbjct: 750 AY*GSSHTKMLS*TEPAFTCQTSIPTYFQ 664
Score = 47.3 bits (97), Expect(3) = 2e-027
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -1 / -3
Query: 347 QRLQHXXXXXXXXXXXIDPWGLPFTLVVRIFNSLAFPRSLVCWI 216
QRL+ ++PW P LVV IFN L PR LVCWI
Sbjct: 666 QRLEDIKIWIIFKFWIVNPWSFPLALVVGIFNFLRLPRPLVCWI 535
Score = 33.1 bits (66), Expect(3) = 2e-027
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1 / -2
Query: 428 ILRVITNQNVVEN*TSFYLPNFNSNILQR 342
ILR+IT+ NVV N +LP+FN +I +
Sbjct: 748 ILRIITH*NVVINRACLHLPDFNPHIFSK 662
Score = 30.9 bits (61), Expect(2) = 1e-030
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 361 LKFGR*KLVQFSTTF*FVMTLSM 429
LK GR*+ +F TTF* VM LSM
Sbjct: 681 LKSGR*RQARFMTTF*CVMILSM 749
>gb|CF393816.1|CF393816 RTDS2_1_A10.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_A10_A021 5', mRNA sequence
Length = 755
Score = 177 bits (382), Expect(2) = 5e-059
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 335 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 514
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 515 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 604
Score = 71.2 bits (149), Expect(2) = 5e-059
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPP++IKD AK+P+DW+D+EYI DP++ KPEGY
Sbjct: 158 DILPPKQIKDPDAKKPEDWEDKEYIPDPEDKKPEGY 265
Score = 66.6 bits (139), Expect(2) = 9e-021
Identities = 37/96 (38%), Positives = 50/96 (52%)
Frame = -1 / -2
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W PF+LV+ I + L P S V WI P IL+ +P + L + I N + II+L
Sbjct: 436 WCNPFSLVLWILDFLWLPGSFVLWIRNGWSFPLPILLIVPVLWLCGI*IWNFLRNVIISL 257
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIPSG 3
L I N+F V P+ FG+ ILN +NIP G
Sbjct: 256 RLFVFWIRNVFLVFPVFWLFGIRILNLFWWQNIPFG 149
Score = 54.2 bits (112), Expect(2) = 9e-021
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / -3
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS F AYSGSS +MLS P FTC +SIP YF+
Sbjct: 597 VSSANFFAYSGSSHTKMLSNNVPDFTCHSSIPKYFR 490
>gb|CF670333.1|CF670333 RTCNT1_49_C06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_49_C06_A029 5', mRNA sequence
Length = 709
Score = 177 bits (382), Expect(2) = 5e-059
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 182 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 361
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 362 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 451
Score = 71.2 bits (149), Expect(2) = 5e-059
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPP++IKD AK+P+DW+D+EYI DP++ KPEGY
Sbjct: 5 DILPPKQIKDPDAKKPEDWEDKEYIPDPEDKKPEGY 112
>gb|CF668506.1|CF668506 RTCNT1_36_H10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_H10_A029 5', mRNA sequence
Length = 565
Score = 177 bits (382), Expect(2) = 5e-059
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 236 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 415
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 416 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 505
Score = 71.2 bits (149), Expect(2) = 5e-059
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPP++IKD AK+P+DW+D+EYI DP++ KPEGY
Sbjct: 59 DILPPKQIKDPDAKKPEDWEDKEYIPDPEDKKPEGY 166
Score = 66.6 bits (139), Expect(2) = 9e-021
Identities = 37/96 (38%), Positives = 50/96 (52%)
Frame = -1 / -1
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W PF+LV+ I + L P S V WI P IL+ +P + L + I N + II+L
Sbjct: 337 WCNPFSLVLWILDFLWLPGSFVLWIRNGWSFPLPILLIVPVLWLCGI*IWNFLRNVIISL 158
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIPSG 3
L I N+F V P+ FG+ ILN +NIP G
Sbjct: 157 RLFVFWIRNVFLVFPVFWLFGIRILNLFWWQNIPFG 50
Score = 54.2 bits (112), Expect(2) = 9e-021
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / -2
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS F AYSGSS +MLS P FTC +SIP YF+
Sbjct: 498 VSSANFFAYSGSSHTKMLSNNVPDFTCHSSIPKYFR 391
>gb|AF283816.1|AF283816 Pinus taeda calreticulin mRNA, complete cds
Length = 1593
Score = 174 bits (375), Expect(2) = 3e-058
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 807 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 986
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 987 WQVKSGTLFDNILISDDPEYAKKLAEETW 1073
Score = 85.8 bits (181), Expect(2) = 3e-026
Identities = 41/94 (43%), Positives = 54/94 (57%)
Frame = -1 / -2
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W LPFTLVVRI N L P S + WI P +IL+ IP + L + IR W+ II+L
Sbjct: 908 WSLPFTLVVRILNFLRLPGSFIFWICNSWSCPLTILLVIPILGLSGIWIRYFLWNVIISL 729
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIP 9
I NIF +IPILR FG+ +L+ + +P
Sbjct: 728 RFLVFWIRNIFLIIPILRLFGIRVLDCFWWQQVP 627
Score = 72.1 bits (151), Expect(2) = 3e-058
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +3
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 630 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 737
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / -3
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS FLAYSGSS+I+MLS P TC SIP Y +
Sbjct: 1069 VSSANFLAYSGSSEIKMLSNNVPDLTCHNSIPRYLR 962
>gb|CV036192.1|CV036192 RTNACL1_57_H03.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_57_H03_A029 3', mRNA sequence
Length = 758
Score = 174 bits (375), Expect(2) = 3e-058
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 451 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 630
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 631 WQVKSGTLFDNILISDDPEYAKKLAEETW 717
Score = 85.8 bits (181), Expect(2) = 3e-026
Identities = 41/94 (43%), Positives = 54/94 (57%)
Frame = -1 / -3
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W LPFTLVVRI N L P S + WI P +IL+ IP + L + IR W+ II+L
Sbjct: 552 WSLPFTLVVRILNFLRLPGSFIFWICNSWSCPLTILLVIPILGLSGIWIRYFLWNVIISL 373
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIP 9
I NIF +IPILR FG+ +L+ + +P
Sbjct: 372 RFLVFWIRNIFLIIPILRLFGIRVLDCFWWQQVP 271
Score = 72.1 bits (151), Expect(2) = 3e-058
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +1
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 274 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 381
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / -1
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS FLAYSGSS+I+MLS P TC SIP Y +
Sbjct: 713 VSSANFLAYSGSSEIKMLSNNVPDLTCHNSIPRYLR 606
>gb|DR012575.1|DR012575 HEAT1_13_E12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_13_E12_A029 5', mRNA sequence
Length = 755
Score = 174 bits (375), Expect(2) = 3e-058
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / -1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 329 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 150
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 149 WQVKSGTLFDNILISDDPEYAKKLAEETW 63
Score = 85.8 bits (181), Expect(2) = 3e-026
Identities = 41/94 (43%), Positives = 54/94 (57%)
Frame = -1 / +3
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W LPFTLVVRI N L P S + WI P +IL+ IP + L + IR W+ II+L
Sbjct: 228 WSLPFTLVVRILNFLRLPGSFIFWICNSWSCPLTILLVIPILGLSGIWIRYFLWNVIISL 407
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIP 9
I NIF +IPILR FG+ +L+ + +P
Sbjct: 408 RFLVFWIRNIFLIIPILRLFGIRVLDCFWWQQVP 509
Score = 72.1 bits (151), Expect(2) = 3e-058
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / -1
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 506 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 399
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS FLAYSGSS+I+MLS P TC SIP Y +
Sbjct: 67 VSSANFLAYSGSSEIKMLSNNVPDLTCHNSIPRYLR 174
>gb|DR744725.1|DR744725 RTCU1_24_B03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_B03_A029 5', mRNA sequence
Length = 747
Score = 174 bits (375), Expect(2) = 3e-058
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 437 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 616
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 617 WQVKSGTLFDNILISDDPEYAKKLAEETW 703
Score = 85.8 bits (181), Expect(2) = 3e-026
Identities = 41/94 (43%), Positives = 54/94 (57%)
Frame = -1 / -3
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W LPFTLVVRI N L P S + WI P +IL+ IP + L + IR W+ II+L
Sbjct: 538 WSLPFTLVVRILNFLRLPGSFIFWICNSWSCPLTILLVIPILGLSGIWIRYFLWNVIISL 359
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIP 9
I NIF +IPILR FG+ +L+ + +P
Sbjct: 358 RFLVFWIRNIFLIIPILRLFGIRVLDCFWWQQVP 257
Score = 72.1 bits (151), Expect(2) = 3e-058
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 260 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 367
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / -1
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS FLAYSGSS+I+MLS P TC SIP Y +
Sbjct: 699 VSSANFLAYSGSSEIKMLSNNVPDLTCHNSIPRYLR 592
>gb|CF475292.1|CF475292 RTWW2_13_H04.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_13_H04_A021 3', mRNA sequence
Length = 551
Score = 174 bits (375), Expect(2) = 3e-058
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 244 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 423
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 424 WQVKSGTLFDNILISDDPEYAKKLAEETW 510
Score = 85.8 bits (181), Expect(2) = 3e-026
Identities = 41/94 (43%), Positives = 54/94 (57%)
Frame = -1 / -3
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W LPFTLVVRI N L P S + WI P +IL+ IP + L + IR W+ II+L
Sbjct: 345 WSLPFTLVVRILNFLRLPGSFIFWICNSWSCPLTILLVIPILGLSGIWIRYFLWNVIISL 166
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIP 9
I NIF +IPILR FG+ +L+ + +P
Sbjct: 165 RFLVFWIRNIFLIIPILRLFGIRVLDCFWWQQVP 64
Score = 72.1 bits (151), Expect(2) = 3e-058
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +1
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 67 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 174
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / -1
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS FLAYSGSS+I+MLS P TC SIP Y +
Sbjct: 506 VSSANFLAYSGSSEIKMLSNNVPDLTCHNSIPRYLR 399
>gb|CF396421.1|CF396421 RTDS2_21_H12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_21_H12_A021 5', mRNA sequence
Length = 752
Score = 173 bits (373), Expect(2) = 9e-058
Identities = 61/90 (67%), Positives = 74/90 (82%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F++DP+LYV LKY+GIE+
Sbjct: 291 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKEDPELYVFPSLKYLGIEL 470
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 471 WQVK*GTLFDNILVCDDPEYAKKLAEETWG 560
Score = 71.2 bits (149), Expect(2) = 9e-058
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +3
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPP++IKD AK+P+DW+D+EYI DP++ KPEGY
Sbjct: 114 DILPPKQIKDPDAKKPEDWEDKEYIPDPEDKKPEGY 221
Score = 66.6 bits (139), Expect(2) = 9e-021
Identities = 37/96 (38%), Positives = 50/96 (52%)
Frame = -1 / -1
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W PF+LV+ I + L P S V WI P IL+ +P + L + I N + II+L
Sbjct: 392 WCNPFSLVLWILDFLWLPGSFVLWIRNGWSFPLPILLIVPVLWLCGI*IWNFLRNVIISL 213
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIPSG 3
L I N+F V P+ FG+ ILN +NIP G
Sbjct: 212 RLFVFWIRNVFLVFPVFWLFGIRILNLFWWQNIPFG 105
Score = 54.2 bits (112), Expect(2) = 9e-021
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / -2
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS F AYSGSS +MLS P FTC +SIP YF+
Sbjct: 553 VSSANFFAYSGSSHTKMLSNNVPYFTCHSSIPKYFR 446
>gb|DR022118.1|DR022118 STRS1_49_A10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_49_A10_A034 3', mRNA sequence
Length = 848
Score = 177 bits (382), Expect(2) = 1e-057
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 173 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 352
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 353 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 442
Score = 66.6 bits (139), Expect(2) = 1e-057
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +3 / +2
Query: 18 LPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
LPP++IKD AK+P+DW+D+EYI DP++ KPEGY
Sbjct: 2 LPPKQIKDPDAKKPEDWEDKEYIPDPEDKKPEGY 103
>gb|CO366415.1|CO366415 RTK1_27_E11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_27_E11_A029 5', mRNA sequence
Length = 797
Score = 170 bits (366), Expect(2) = 4e-057
Identities = 61/89 (68%), Positives = 74/89 (83%)
Frame = +3 / -2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 298 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 119
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++ DNILI DDPEYA+K+ EETW
Sbjct: 118 WQVKSGTLNDNILISDDPEYAKKLAEETW 32
Score = 85.8 bits (181), Expect(2) = 9e-026
Identities = 41/94 (43%), Positives = 54/94 (57%)
Frame = -1 / +2
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W LPFTLVVRI N L P S + WI P +IL+ IP + L + IR W+ II+L
Sbjct: 197 WSLPFTLVVRILNFLRLPGSFIFWICNSWSCPLTILLVIPILGLSGIWIRYFLWNVIISL 376
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIP 9
I NIF +IPILR FG+ +L+ + +P
Sbjct: 377 RFLVFWIRNIFLIIPILRLFGIRVLDCFWWQQVP 478
Score = 72.1 bits (151), Expect(2) = 4e-057
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / -2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 475 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 368
Score = 51.9 bits (107), Expect(2) = 9e-026
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / +3
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS FLAYSGSS+I+MLS P TC SIP Y +
Sbjct: 36 VSSANFLAYSGSSEIKMLSFNVPDLTCHNSIPRYLR 143
>gb|CO158387.1|CO158387 FLD1_6_C10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_C10_A029 5', mRNA sequence
Length = 802
Score = 215 bits (463), Expect(2) = 6e-057
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
GIWK + NPAYKGPWK K+IKNPNYKGKWKTPW+DNPEFEDDPDLYV KPLKY+GIEV
Sbjct: 61 GIWKAPKIPNPAYKGPWKAKKIKNPNYKGKWKTPWVDNPEFEDDPDLYVFKPLKYVGIEV 240
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWGAN 464
WQVKAGSV+DNIL+CDDP+YAR+V EETWG N
Sbjct: 241 WQVKAGSVYDNILVCDDPQYAREVAEETWGRN 336
Score = 116 bits (249), Expect = 2e-025
Identities = 59/109 (54%), Positives = 74/109 (67%)
Frame = +1 / +2
Query: 130 QNRFLIRRTKSLTHGMKMRMEYGSPEWYQIQHTRDLGNARELKILTTRVNGRPHGSIIQS 309
Q ++ I+R KSL G + M YG + IQHTR LG R+LKI TTR +G+ HG IQ+
Sbjct: 2 QQKYQIQRQKSLMTGRRKMMGYGKHQRSPIQHTRGLGRRRKLKIPTTRGSGKLHGLTIQN 181
Query: 310 LRMIQIFMC*SL*SILELKFGR*KLVQFSTTF*FVMTLSMQERLLRKLG 456
L+MIQIFM SL*++ LK GR*+ +F TTF* VM LSM RLLR+ G
Sbjct: 182 LKMIQIFMSSSL*NMWGLKSGR*RQARFMTTF*CVMILSMLGRLLRRHG 328
Score = 114 bits (244), Expect = 1e-024
Identities = 56/111 (50%), Positives = 62/111 (55%)
Frame = -3 / -1
Query: 477 FQPPYLHPKFPQQPFLHTQGHHKSECCRKLNQLLPAKLQFQYTSKASAHKDLDHPQTLDY 298
F P P PQQP HT+ HH +CC K + PA+LQ + SKA HKDLDH Q LD
Sbjct: 349 FPSPCFFPMSPQQPPEHTEDHHTLKCCHKPSLPSPARLQSPHISKA*RHKDLDHLQILDC 170
Query: 297 RSMGSSIYPCS*DF*FSCVSKVPCMLDLIPFWASIFHPHLHPMCQAFCPSD 145
+ M S PCS DF*FS SK PCMLD SI H P QAF P D
Sbjct: 169 QPMEFSTSPCSWDF*FSSPSKAPCMLDWGSLVLSISHHLPPPSHQAFLPLD 17
Score = 27.2 bits (53), Expect(2) = 6e-057
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3 / +1
Query: 24 PRKIKDVHAKRPKDWDDRE 80
P +I D AK+P DW++ +
Sbjct: 1 PAEIPDPKAKKPDDWEEED 57
>gb|CV031923.1|CV031923 RTNACL1_4_D03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_4_D03_A029 5', mRNA sequence
Length = 745
Score = 215 bits (463), Expect(2) = 6e-057
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +3 / -3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
GIWK + NPAYKGPWK K+IKNPNYKGKWKTPW+DNPEFEDDPDLYV KPLKY+GIEV
Sbjct: 674 GIWKAPKIPNPAYKGPWKAKKIKNPNYKGKWKTPWVDNPEFEDDPDLYVFKPLKYVGIEV 495
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWGAN 464
WQVKAGSV+DNIL+CDDP+YAR+V EETWG N
Sbjct: 494 WQVKAGSVYDNILVCDDPQYAREVAEETWGRN 399
Score = 120 bits (256), Expect = 2e-026
Identities = 60/112 (53%), Positives = 76/112 (67%)
Frame = +1 / -1
Query: 121 ILSQNRFLIRRTKSLTHGMKMRMEYGSPEWYQIQHTRDLGNARELKILTTRVNGRPHGSI 300
I+ Q ++ I+R KSL G + M YG + IQHTR LG R+LKI TTR +G+ HG
Sbjct: 742 IIFQQKYQIQRQKSLMTGRRKMMGYGKHQRSPIQHTRGLGRRRKLKIPTTRASGKLHGLT 563
Query: 301 IQSLRMIQIFMC*SL*SILELKFGR*KLVQFSTTF*FVMTLSMQERLLRKLG 456
IQ+L+MIQIFM SL*++ LK GR*+ +F TTF* VM LSM RLLR+ G
Sbjct: 562 IQNLKMIQIFMSSSL*NMWGLKSGR*RQARFMTTF*CVMILSMLGRLLRRHG 407
Score = 114 bits (244), Expect = 1e-024
Identities = 56/111 (50%), Positives = 62/111 (55%)
Frame = -3 / +2
Query: 477 FQPPYLHPKFPQQPFLHTQGHHKSECCRKLNQLLPAKLQFQYTSKASAHKDLDHPQTLDY 298
F P P PQQP HT+ HH +CC K + PA+LQ + SKA HKDLDH Q LD
Sbjct: 386 FPSPCFFPMSPQQPPEHTEDHHTLKCCHKPSLPSPARLQSPHISKA*RHKDLDHLQILDC 565
Query: 297 RSMGSSIYPCS*DF*FSCVSKVPCMLDLIPFWASIFHPHLHPMCQAFCPSD 145
+ M S PCS DF*FS SK PCMLD SI H P QAF P D
Sbjct: 566 QPMEFSTCPCSWDF*FSSPSKAPCMLDWGSLVLSISHHLPPPSHQAFLPLD 718
Score = 27.2 bits (53), Expect(2) = 6e-057
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3 / -3
Query: 24 PRKIKDVHAKRPKDWDDRE 80
P +I D AK+P DW++ +
Sbjct: 734 PAEIPDPKAKKPDDWEEED 678
>gb|DR019100.1|DR019100 STRS1_27_G03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_G03_A034 5', mRNA sequence
Length = 867
Score = 174 bits (375), Expect(2) = 5e-055
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 185 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 364
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 365 WQVKSGTLFDNILISDDPEYAKKLAEETW 451
Score = 84.9 bits (179), Expect(2) = 6e-026
Identities = 40/86 (46%), Positives = 51/86 (59%)
Frame = -1 / -3
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W LPFTLVVRI N L P S + WI P +IL+ IP + L + IR W+ II+L
Sbjct: 286 WSLPFTLVVRILNFLRLPGSFIFWICNSWSCPLTILLVIPILGLSGIWIRYFLWNVIISL 107
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILN 33
I NIF +IPILR FG+ +L+
Sbjct: 106 RFLVFWIRNIFLIIPILRLFGIRVLD 29
Score = 61.1 bits (127), Expect(2) = 5e-055
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +3 / +2
Query: 15 ILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
++ + IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 11 LVATKNIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 115
Score = 53.3 bits (110), Expect(2) = 6e-026
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2 / -1
Query: 451 VSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
VSS FLAYSGSS+I+MLS P TC SIP Y +
Sbjct: 447 VSSANFLAYSGSSEIKMLSNNVPDLTCHNSIPRYLR 340
>gb|DR052273.1|DR052273 RTCA1_3_C03.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_3_C03_A029 5', mRNA sequence
Length = 860
Score = 162 bits (349), Expect(2) = 9e-055
Identities = 58/84 (69%), Positives = 71/84 (84%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 607 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 786
Query: 369 WQVKAGSVFDNILICDDPEYARKV 440
WQVK+G++FDNILI DDPEYA+K+
Sbjct: 787 WQVKSGTLFDNILISDDPEYAKKL 858
Score = 85.8 bits (181), Expect(2) = 1e-024
Identities = 41/94 (43%), Positives = 54/94 (57%)
Frame = -1 / -3
Query: 290 WGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIAL 111
W LPFTLVVRI N L P S + WI P +IL+ IP + L + IR W+ II+L
Sbjct: 708 WSLPFTLVVRILNFLRLPGSFIFWICNSWSCPLTILLVIPILGLSGIWIRYFLWNVIISL 529
Query: 110 WLNFIRIFNIFSVIPILRPFGVNILNFTRRENIP 9
I NIF +IPILR FG+ +L+ + +P
Sbjct: 528 RFLVFWIRNIFLIIPILRLFGIRVLDCFWWQQVP 427
Score = 72.1 bits (151), Expect(2) = 9e-055
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +1
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 430 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 537
Score = 47.8 bits (98), Expect(2) = 1e-024
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2 / -1
Query: 436 FLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
FLAYSGSS+I+MLS P TC SIP Y +
Sbjct: 854 FLAYSGSSEIKMLSNNVPDLTCHNSIPRYLR 762
>gb|DR110346.1|DR110346 RTS1_10_H03.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_10_H03_A029 3', mRNA sequence
Length = 825
Score = 177 bits (382), Expect(2) = 4e-053
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 144 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 323
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 324 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 413
Score = 51.5 bits (106), Expect(2) = 4e-053
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = +3 / +3
Query: 48 AKRPKDWDDREYIEDPDEVKPEGY 119
AK+P+DW+D+EYI DP++ KPEGY
Sbjct: 3 AKKPEDWEDKEYIPDPEDKKPEGY 74
>gb|CO364984.1|CO364984 RTK1_23_A06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_23_A06_A029 3', mRNA sequence
Length = 825
Score = 177 bits (382), Expect(2) = 2e-052
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 156 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 335
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 336 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 425
Score = 49.2 bits (101), Expect(2) = 2e-052
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3 / +3
Query: 36 KDVHAKRPKDWDDREYIEDPDEVKPEGY 119
KD AK P+DW+D+EYI DP++ K EGY
Sbjct: 3 KDPDAKSPEDWEDKEYIPDPEDKKLEGY 86
>gb|DR167453.1|DR167453 RTPHOS1_18_H05.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_18_H05_A029 5', mRNA sequence
Length = 509
Score = 177 bits (382), Expect(2) = 5e-052
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 149 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 328
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 329 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 418
Score = 47.8 bits (98), Expect(2) = 5e-052
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 51 KRPKDWDDREYIEDPDEVKPEGY 119
++P+DW+D+EYI DP++ KPEGY
Sbjct: 11 QKPEDWEDKEYIPDPEDKKPEGY 79
>gb|CO175700.1|CO175700 NDL1_56_A03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_56_A03_A029 5', mRNA sequence
Length = 758
Score = 135 bits (290), Expect(2) = 1e-049
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIG 359
GIWK + NPAYKGPWK K IKNPNYKGKWKTPW+DNPEFEDDPDLYV KPLKY+G
Sbjct: 574 GIWKSPKIPNPAYKGPWKAKXIKNPNYKGKWKTPWVDNPEFEDDPDLYVFKPLKYVG 744
Score = 121 bits (258), Expect = 1e-026
Identities = 60/115 (52%), Positives = 77/115 (66%)
Frame = +1 / +2
Query: 10 GIFSLLVKLRMFTPKGLRIGMTENILKILMKLSQRAMILSQNRFLIRRTKSLTHGMKMRM 189
GIF L K + PK L+IGM E+IL ILM +QRA I+ Q ++ I+R KSL G + M
Sbjct: 395 GIFFRLEKSEI*RPKSLKIGMIESILMILMPQNQRATIIFQQKYQIQRQKSLMTGRRKMM 574
Query: 190 EYGSPEWYQIQHTRDLGNARELKILTTRVNGRPHGSIIQSLRMIQIFMC*SL*SI 354
YG+ + IQHTR LG R LKI TTR +G+ HG IQ+L+MIQIFM SL*++
Sbjct: 575 GYGNHQRSPIQHTRGLGRRRXLKIPTTRGSGKLHGLTIQNLKMIQIFMSSSL*NM 739
Score = 114 bits (243), Expect = 1e-024
Identities = 60/115 (52%), Positives = 65/115 (56%)
Frame = -3 / -2
Query: 354 YTSKASAHKDLDHPQTLDYRSMGSSIYPCS*DF*FSCVSKVPCMLDLIPFWASIFHPHLH 175
+ SKA HKDLDH Q LD + M S PCS DF* S SK PCMLD SI H
Sbjct: 739 HISKA*RHKDLDHLQILDCQPMEFSTSPCSWDF*XSSPSKAPCMLDWGSLVISISHHLPP 560
Query: 174 PMCQAFCPSDQESVLG*NHSPLA*LHQDLQYILCHPNP*AFWREHP*FYEEGEYP 10
P QAF P D +L SPL HQD QY L HPN *AFW + *F+E EYP
Sbjct: 559 PSHQAFLPLDLVFLLEYYRSPLVLWHQDHQYTLYHPNL*AFWPSNL*FFEAEEYP 395
Score = 82.2 bits (173), Expect(2) = 1e-049
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +3 / +1
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPPRKI+D+ AK+PKDWDDREYI+DPD KPEGY
Sbjct: 397 DILPPRKIRDLKAKKPKDWDDREYIDDPDATKPEGY 504
Score = 80.3 bits (169), Expect(2) = 1e-023
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = -1 / -3
Query: 197 PYSILIFIPCVRLFVLRIRNLFWDRIIALWLNFIRIFNIFSVIPILRPFGVNILNFTRRE 18
PY I+ +P +RLF L I W+ I+ALW IRI NI S+IPI R FG+ I +F+RR+
Sbjct: 582 PYPIIFLLPVIRLFCLWIWYFCWNIIVALWFCGIRIINILSIIPIFRLFGLQISDFSRRK 403
Query: 17 NIP 9
NIP
Sbjct: 402 NIP 394
Score = 50.1 bits (103), Expect(2) = 1e-023
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = -1 / -3
Query: 356 NILQRLQHXXXXXXXXXXXIDPWGLPFTLVVRIFNSLAFPRSLVCWI 216
+I QRL+ ++PW P LVV IFN L PR LVCWI
Sbjct: 741 HIFQRLEDIKIWIIFKFWIVNPWSFPLPLVVGIFNXLRLPRPLVCWI 601
>gb|CR393186.1|CR393186 CR393186 RN Pinus pinaster cDNA clone RN53F09, mRNA sequence
Length = 588
Score = 177 bits (382), Expect(2) = 4e-047
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 99 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 278
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 279 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 368
Score = 31.3 bits (62), Expect(2) = 4e-047
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 24 PRKIKDVHAKRPKDWDDRE 80
P++I D A +P+DWDD E
Sbjct: 39 PQEIPDSDATKPEDWDDEE 95
>gb|CX647947.1|CX647947 COLD1_25_C01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_25_C01_A029 5', mRNA sequence
Length = 845
Score = 174 bits (375), Expect(2) = 1e-045
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / -2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 769 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 590
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 589 WQVKSGTLFDNILISDDPEYAKKLAEETW 503
Score = 29.5 bits (58), Expect(2) = 1e-045
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3 / -2
Query: 24 PRKIKDVHAKRPKDWDDRE 80
P++I D A +P+DW+D E
Sbjct: 829 PKEIPDPDATKPEDWNDEE 773
>gb|CF668421.1|CF668421 RTCNT1_36_H10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_H10_A029 3', mRNA sequence
Length = 689
Score = 177 bits (382), Expect = 9e-044
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 27 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 206
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 207 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 296
>gb|CF670258.1|CF670258 RTCNT1_49_C06.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_49_C06_A029 3', mRNA sequence
Length = 701
Score = 177 bits (382), Expect = 9e-044
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 25 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIEL 204
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 205 WQVKSGTLFDNILVCDDPEYAKKLAEETWG 294
>gb|CV034792.1|CV034792 RTNACL1_11_D05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_11_D05_A029 5', mRNA sequence
Length = 646
Score = 176 bits (379), Expect = 2e-043
Identities = 61/88 (69%), Positives = 74/88 (84%)
Frame = +3 / -3
Query: 195 WKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQ 374
WK + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+WQ
Sbjct: 641 WKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIELWQ 462
Query: 375 VKAGSVFDNILICDDPEYARKVVEETWG 458
VK+G++FDNIL+CDDPEYA+K+ EETWG
Sbjct: 461 VKSGTLFDNILVCDDPEYAKKLAEETWG 378
>gb|DR012617.1|DR012617 HEAT1_14_A11.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_A11_A029 3', mRNA sequence
Length = 791
Score = 174 bits (375), Expect = 8e-043
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 29 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 208
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 209 WQVKSGTLFDNILISDDPEYAKKLAEETW 295
>gb|DR012699.1|DR012699 HEAT1_14_A11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_A11_A029 5', mRNA sequence
Length = 817
Score = 174 bits (375), Expect = 8e-043
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 30 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 209
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 210 WQVKSGTLFDNILISDDPEYAKKLAEETW 296
>gb|DR744660.1|DR744660 RTCU1_24_B03.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_B03_A029 3', mRNA sequence
Length = 816
Score = 174 bits (375), Expect = 8e-043
Identities = 62/89 (69%), Positives = 75/89 (84%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 30 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 209
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 210 WQVKSGTLFDNILISDDPEYAKKLAEETW 296
>gb|BE662302.1|BE662302 ST84/ST84D02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST84/ST84D02, mRNA sequence
Length = 421
Score = 164 bits (353), Expect(2) = 1e-042
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 67 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIEL 246
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
VK+G++FDNILI DDPEYA+K EETW
Sbjct: 247 XXVKSGTLFDNILISDDPEYAKKXXEETW 333
Score = 29.5 bits (58), Expect(2) = 1e-042
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 24 PRKIKDVHAKRPKDWDDRE 80
P++I D A +P+DW+D E
Sbjct: 7 PKEIPDPDATKPEDWNDEE 63
>gb|AJ541803.1|AJ541803 AJ541803 Pinus pinaster differentiating xylem adult Pinus pinaster
cDNA clone PP001B06, mRNA sequence
Length = 702
Score = 171 bits (368), Expect(2) = 2e-042
Identities = 61/89 (68%), Positives = 74/89 (83%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPW K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+
Sbjct: 38 GEWTAPTIANPEYKGPWNPKKIKNPNYKGKWKAPIIDNPDFKDDPELYVFPNLKYLGIEL 217
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DDPEYA+K+ EETW
Sbjct: 218 WQVKSGTLFDNILISDDPEYAKKLAEETW 304
Score = 22.1 bits (42), Expect(2) = 2e-042
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 48 AKRPKDWDDRE 80
A +P+DW+D E
Sbjct: 2 ATKPEDWNDEE 34
>gb|AW290111.1|AW290111 NXNV010D03F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV010D03 5', mRNA sequence
Length = 346
Score = 170 bits (366), Expect = 1e-041
Identities = 60/82 (73%), Positives = 73/82 (89%)
Frame = +3 / +1
Query: 210 VSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGS 389
++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+WQVK+G+
Sbjct: 58 IANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIELWQVKSGT 237
Query: 390 VFDNILICDDPEYARKVVEETW 455
+FDNILI DDPEYA+K+ EETW
Sbjct: 238 LFDNILISDDPEYAKKLAEETW 303
>gb|CD026738.1|CD026738 NXNV010D03 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV010D03 5' similar to Arabidopsis thaliana sequence
At1g56340 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 346
Score = 170 bits (366), Expect = 1e-041
Identities = 60/82 (73%), Positives = 73/82 (89%)
Frame = +3 / +1
Query: 210 VSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGS 389
++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+WQVK+G+
Sbjct: 58 IANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIELWQVKSGT 237
Query: 390 VFDNILICDDPEYARKVVEETW 455
+FDNILI DDPEYA+K+ EETW
Sbjct: 238 LFDNILISDDPEYAKKLAEETW 303
>gb|AA556373.1|AA556373 228 Loblolly pine C Pinus taeda cDNA clone 1C10G, mRNA sequence
Length = 638
Score = 168 bits (362), Expect = 5e-041
Identities = 59/87 (67%), Positives = 72/87 (82%)
Frame = +3 / +1
Query: 198 KPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQV 377
K + NP YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+WQV
Sbjct: 4 KAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIELWQV 183
Query: 378 KAGSVFDNILICDDPEYARKVVEETWG 458
K+G++FDNIL+CDDPEYA+K+ ETWG
Sbjct: 184 KSGTLFDNILVCDDPEYAKKLAXETWG 264
>gb|CO200857.1|CO200857 RTCNT2_2_B11.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_B11_A029 3', mRNA sequence
Length = 625
Score = 167 bits (359), Expect = 1e-040
Identities = 58/80 (72%), Positives = 70/80 (87%)
Frame = +3 / +2
Query: 219 PAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFD 398
P YKGPWK K+IKNP YKGKW P IDNP+F+DDP+LYV LKY+GIE+WQVK+G++FD
Sbjct: 2 PEYKGPWKPKKIKNPKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIELWQVKSGTLFD 181
Query: 399 NILICDDPEYARKVVEETWG 458
NIL+CDDPEYA+K+ EETWG
Sbjct: 182 NILVCDDPEYAKKLAEETWG 241
>gb|DR091549.1|DR091549 RTAL1_22_H09.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_22_H09_A029 3', mRNA sequence
Length = 751
Score = 163 bits (350), Expect = 2e-039
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +3 / +1
Query: 225 YKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNI 404
YKGPWK K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+GIE+WQVK+G++FDNI
Sbjct: 1 YKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPELYVFPNLKYLGIELWQVKSGTLFDNI 180
Query: 405 LICDDPEYARKVVEETW 455
LI DDPEYA+K+ EETW
Sbjct: 181 LISDDPEYAKKLAEETW 231
>gb|DR098180.1|DR098180 STRR1_39_D06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_39_D06_A033 5', mRNA sequence
Length = 632
Score = 158 bits (340), Expect = 6e-038
Identities = 56/65 (86%), Positives = 62/65 (95%)
Frame = +3 / -2
Query: 270 KGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYARKVVEE 449
KGKWKTPW+DNPEFEDDPDLYV KPLKY+GIEVWQVKAGSV+DNIL+CDDP+YAR+V EE
Sbjct: 631 KGKWKTPWVDNPEFEDDPDLYVFKPLKYVGIEVWQVKAGSVYDNILVCDDPQYAREVAEE 452
Query: 450 TWGAN 464
TWG N
Sbjct: 451 TWGRN 437
>gb|CO198875.1|CO198875 GEO1_17_E10.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_17_E10_A029 3', mRNA sequence
Length = 661
Score = 156 bits (335), Expect = 3e-037
Identities = 55/64 (85%), Positives = 61/64 (95%)
Frame = +3 / +2
Query: 273 GKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYARKVVEET 452
GKWKTPW+DNPEFEDDPDLYV KPLKY+GIEVWQVKAGSV+DNIL+CDDP+YAR+V EET
Sbjct: 2 GKWKTPWVDNPEFEDDPDLYVFKPLKYVGIEVWQVKAGSVYDNILVCDDPQYAREVAEET 181
Query: 453 WGAN 464
WG N
Sbjct: 182 WGRN 193
>gb|AW289804.1|AW289804 NXNV006D09F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV006D09 5', mRNA sequence
Length = 418
Score = 104 bits (221), Expect(2) = 3e-037
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DD LYV LKY+
Sbjct: 215 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDXXLYVFPNLKYLXXXX 394
Query: 369 WQVKAGSV 392
K+G++
Sbjct: 395 XXXKSGTL 418
Score = 72.1 bits (151), Expect(2) = 3e-037
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 38 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 145
>gb|CD028390.1|CD028390 NXNV006D09 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV006D09 5' similar to Arabidopsis thaliana sequence
At1g56340 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 418
Score = 104 bits (221), Expect(2) = 3e-037
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+DD LYV LKY+
Sbjct: 215 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDXXLYVFPNLKYLXXXX 394
Query: 369 WQVKAGSV 392
K+G++
Sbjct: 395 XXXKSGTL 418
Score = 72.1 bits (151), Expect(2) = 3e-037
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 38 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 145
>gb|AL750674.1|AL750674 AL750674 RN Pinus pinaster cDNA clone RN06A11 similar to
CALRETICULIN, mRNA sequence
Length = 676
Score = 103 bits (220), Expect(2) = 5e-036
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYI 356
G W ++NP YKGPW K+IKNPNYKGKWK P IDNP+F+DDP+LYV LKY+
Sbjct: 509 GEWTAPTIANPEYKGPWNPKKIKNPNYKGKWKAPIIDNPDFKDDPELYVFPNLKYL 676
Score = 68.4 bits (143), Expect(2) = 5e-036
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LP + IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 332 DLLPSKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 439
>gb|BF220810.1|BF220810 NXCI_154_B05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_154_B05 5' similar to Arabidopsis
thaliana sequence At1g56340 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 378
Score = 99.6 bits (211), Expect(2) = 7e-036
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYI 356
G W ++NP YKGPWK K+IKNPNYKGKWK P IDNP+F+D +LYV LKY+
Sbjct: 206 GEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKXPMIDNPDFKDXXELYVFPNLKYL 373
Score = 72.1 bits (151), Expect(2) = 7e-036
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
D+LPP+ IKD +AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 29 DLLPPKTIKDPNAKKPEDWDDKEYIPDPEDKKPEGY 136
>gb|CF671078.1|CF671078 RTCNT1_54_C08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_54_C08_A029 5', mRNA sequence
Length = 676
Score = 147 bits (316), Expect = 1e-034
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +3 / +3
Query: 279 WKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYARKVVEETWG 458
WKTPW+D PEFEDDPDLYV KPLKY+GIEVWQVKAGSV+DNIL+CDDP+YAR+V EETWG
Sbjct: 3 WKTPWVDYPEFEDDPDLYVFKPLKYVGIEVWQVKAGSVYDNILVCDDPQYAREVAEETWG 182
Query: 459 AN 464
N
Sbjct: 183 RN 188
>gb|DR024916.1|DR024916 STRS1_68_H05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_H05_A034 3', mRNA sequence
Length = 652
Score = 144 bits (308), Expect = 1e-033
Identities = 51/61 (83%), Positives = 57/61 (93%)
Frame = +3 / +2
Query: 282 KTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYARKVVEETWGA 461
KTPW+DNPEFEDDPDLYV KPLKY+GIE WQVKAGSV+DNIL+CDDP+YAR+V EETWG
Sbjct: 2 KTPWVDNPEFEDDPDLYVFKPLKYVGIEFWQVKAGSVYDNILVCDDPQYAREVAEETWGR 181
Query: 462 N 464
N
Sbjct: 182 N 184
>gb|BE662548.1|BE662548 ST87/ST87F06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST87/ST87F06, mRNA sequence
Length = 401
Score = 90.9 bits (192), Expect(2) = 5e-033
Identities = 34/60 (56%), Positives = 38/60 (63%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G WK + NP YKGPWK K+IKNP YKGKW P IDNP+ D LYV LKY E+
Sbjct: 220 GEWKAPTIPNPEYKGPWKPKKIKNPKYKGKWVAPMIDNPDXXXDXXLYVFPSLKYXXXEL 399
Score = 71.2 bits (149), Expect(2) = 5e-033
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +1
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPP++IKD AK+P+DW+D+EYI DP++ KPEGY
Sbjct: 43 DILPPKQIKDPDAKKPEDWEDKEYIPDPEDKKPEGY 150
>gb|CV033612.1|CV033612 RTNACL1_35_C08.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_C08_A029 5', mRNA sequence
Length = 573
Score = 136 bits (292), Expect = 2e-031
Identities = 47/66 (71%), Positives = 58/66 (87%)
Frame = +3 / -2
Query: 261 PNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYARKV 440
P YKGKW P IDNP+F+DDP+LYV LKY+GIE+WQVK+G++FDNIL+CDDPEYA+K+
Sbjct: 572 PKYKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIELWQVKSGTLFDNILVCDDPEYAKKL 393
Query: 441 VEETWG 458
EETWG
Sbjct: 392 AEETWG 375
>gb|CF396280.1|CF396280 RTDS2_21_H12.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_21_H12_A021 3', mRNA sequence
Length = 587
Score = 132 bits (283), Expect = 4e-030
Identities = 46/66 (69%), Positives = 57/66 (86%)
Frame = +3 / +1
Query: 261 PNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYARKV 440
P KGKW P IDNP+F+DDP+LYV LKY+GIE+WQVK+G++FDNIL+CDDPEYA+K+
Sbjct: 1 PKSKGKWVAPMIDNPDFKDDPELYVFPSLKYLGIELWQVKSGTLFDNILVCDDPEYAKKL 180
Query: 441 VEETWG 458
EETWG
Sbjct: 181 AEETWG 198
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 520,985,817
Number of Sequences: 355925
Number of extensions: 7292194
Number of successful extensions: 36365
Number of sequences better than 1.0e-020: 69
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 16657694920
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)